HHsearch results for GI: 254780468 and protein with PDBid: 3ewk_A
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transferase, flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=98.91 E-value=7.3e-08 Score=78.91 Aligned_cols=116 Identities=14% Similarity=0.155 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 97488899999832593899998799789998889976289977833897898862697689999999999960789738
Q gi|254780468|r 400 IFSDGERQSLAVLGSGDIVWDWDIVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRGRL 479 (963)
Q Consensus 400 l~~~~er~~~al~~s~~~i~~~d~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~~~ 479 (963)
.....+++..+++++++++|.+|.++.++++|+++++++|++++++.+. .+.+++||++.+.....+...+... ...
T Consensus 106 ~~~~~~~~~~~~~~~~~~i~~~D~~g~i~~~N~~~~~~~G~~~~e~~g~--~~~~l~~~~~~~~~~~~~~~~l~~~-~~~ 182 (227)
T 3ewk_A 106 AEAQLARLKQAMDANSEMILLTDRAGRIIYANPALCRFSGMAEGELLGQ--SPSILDSPLADQETLAAMQEALQAG-QPW 182 (227)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEECTTSCEEEECHHHHHHHTCCTHHHHSS--CGGGGBCTTSCHHHHHHHHHHHHHT-CCE
T ss_pred HHHHHHHHHHHHHHHHHHHEEECCCCEEEEECHHHHHHCCCCHHHHHCC--CCCCCCCCHHCCCCCCCCEEEECCC-CCE
T ss_conf 9999876799999876465377699779999789997649987896055--7552238023023122100000368-857
Q ss_pred EEEEEEEC------CCCCEEEEEEEEEEEECCCCCEEEEEEEEEE
Q ss_conf 99999986------9996899987226768799988999999985
Q gi|254780468|r 480 QYEFRVRA------ADNQFHWMIIRIRPMSNSNGDILRYIGIAND 518 (963)
Q Consensus 480 ~~e~r~r~------~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~D 518 (963)
+.|++.++ +||+.+|+++++.|+++++|++.+++|+.+|
T Consensus 183 ~~e~~~~~~~~~~~~dg~~~w~~~~~~pi~d~~g~v~~~v~v~~D 227 (227)
T 3ewk_A 183 SGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp ECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred EEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEC
T ss_conf 999999984474567982999999999999899999999999989