HHsearch results for GI: 254780468 and protein with PDBid: 3i5c_A
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=99.92 E-value=1.1e-23 Score=206.54 Aligned_cols=175 Identities=24% Similarity=0.338 Sum_probs=144.3
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHH-H
Q ss_conf 312321663067753240669999999999998755338984899999767857988842778899999999999998-3
Q gi|254780468|r 524 KSLEGILCNAFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVLVSLTRRIGE-L 602 (963)
Q Consensus 524 ~~~~~l~~~a~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~~l~~idid~fk~iN~~~G~~~gD~lL~~ia~~L~~-~ 602 (963)
+..++|+++|++|++||||||++|.++++..++++.+.. .++++++|+||+|+.+|+.||+..+|.+++.+++++.+ .
T Consensus 21 ~~~~~l~~la~~D~lTGL~NR~~f~~~l~~~l~~~~~~~-~~~~l~~i~i~~~~~l~~~~G~~~~d~li~~~a~~l~~~~ 99 (206)
T 3i5c_A 21 NEVARLKKLVNSDGLTGLSNRRHFDEYLEMEWRRSLREQ-SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC 99 (206)
T ss_dssp HHHHHHHTTCCBCTTTCSBCHHHHHHHHHHHHHHHHHHT-CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 999999999543866683508899999999999987339-9489999989833488733597553099998888887742
Q ss_pred CCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHC---EEEECCEEEEEEEEEEEEEC--CCCCCCHHHHHHHH
Q ss_conf 48997699980641020255669989999987655543101---15525467999999877645--89889989999999
Q gi|254780468|r 603 LKFPDILARLSGNRFGIILISENNSLKIADFAIAMRKSIAM---PINLLEREITVTASIGFASW--TSSKITSSEMLKNA 677 (963)
Q Consensus 603 ~~~~~~laR~~gdeFaill~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~t~siGi~~~--~~~~~~~~~ll~~A 677 (963)
.++.+.++|+++|+|++++++.+ .+.....++.+.+.+.. ++...+..+.+++|||++.+ +.+..+.++++++|
T Consensus 100 ~~~~d~v~R~~~d~Favl~~~~~-~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~vt~siGia~~~~~~~~~~~~~ll~~A 178 (206)
T 3i5c_A 100 SRSSDLAARYGGEEFAMVLPGTS-PGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMA 178 (206)
T ss_dssp CSTTCEEEEEETTEEEEEEETCC-HHHHHHHHHHHHHHHHHTCCEECSSSTTEECCEEEEEEEECCCSTTCCTHHHHHHH
T ss_pred CCCCCEEEECCCCEEEEECCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHH
T ss_conf 55554446348876776638999-89999999999999997305524677755416899999986799998799999999
Q ss_pred HHHHHHHHHHCCCCEEECCCCCC
Q ss_conf 99999998708974052011111
Q gi|254780468|r 678 ELAMYHAKHRGGNHVESFRVSSF 700 (963)
Q Consensus 678 d~Al~~Ak~~g~~~~~~~~~~~~ 700 (963)
+.||+.||+.|+|++..|+....
T Consensus 179 ~~AL~~AK~~G~n~i~~~~~~~~ 201 (206)
T 3i5c_A 179 DQALYQAKNNGRNQVGLMEQPVP 201 (206)
T ss_dssp HHHHHHHHHTTSSSEEEC-----
T ss_pred HHHHHHHHHHCCCEEEEECCCCC
T ss_conf 99999999868997999369999