HHsearch results for GI: 254780468 and protein with PDBid: 3jyb_A
>3jyb_A Sensor protein; beta barrel, carbohydrate binding domain, signaling kinase, component system, RETS, kinase, phosphoprotein, transferase; 2.04A {Pseudomonas aeruginosa}
Probab=99.74 E-value=8.4e-17 Score=150.92 Aligned_cols=133 Identities=10% Similarity=0.047 Sum_probs=108.2
Q ss_pred CCEEEEEECCCCCCCHHHHHCCCCCCC--CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEEEEEEEECCC
Q ss_conf 002889976998644989632867334--345544578887357999985598883359999556223114899985698
Q gi|254780468|r 47 TSITRIYVNQGEDFQVFTAADIDGISR--RIEVSASSIRHRGDWAVFALANTSDSQLERLIVVPHYRLVGSHFFSPDLGS 124 (963)
Q Consensus 47 ~~~~~~~~d~~~~l~i~~v~~~~~~~~--~~~~~~~~~~~s~~W~~~~l~N~s~~~~~~~L~~~~p~Ld~i~~y~~~~~~ 124 (963)
..++.+|+|++++|+++||+++..... .....+.|++.+++|+||+|.|.+. +++|++++|.+|++++|.++.|+
T Consensus 7 ~~~~~vL~D~~~~Lti~~v~~~~~~f~~~~~~~~n~G~s~~~~Wlr~~l~n~~~---~~~L~i~~p~ld~v~lY~~~~~~ 83 (145)
T 3jyb_A 7 NQNWRLLRDESAQLRIADVLQRKEQFRPLAKRSFIFPASPQAVWLQVQLPAQKV---PSWLWIFAPRVQYLDYYLVQDGQ 83 (145)
T ss_dssp -CCEEEEEETTSCCCHHHHHTCGGGCEECSSSEEEECSCSCEEEEEEEECCCSS---CEEEEEECTTCSEEEEEEEETTE
T ss_pred CCCEEEEECCCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCC---CCEEEECCCCCCEEEEEEECCCC
T ss_conf 788899998999978999858462576188887455888867899999537984---57799778877889999991995
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCC--EEEEEEECHHHHHH
Q ss_conf 368863387677323555566744778738998599999973898--01388628789999
Q gi|254780468|r 125 RRIISVTPSEGFSLDRIPNSDSDVFRITINPGAVVTFIMEISTPN--LPQIYLWEPNFYKD 183 (963)
Q Consensus 125 ~~~~~~~~~~~~~~~R~~~~~~~~f~l~l~p~~~~t~~~r~~s~~--~~~i~Lw~~~~~~~ 183 (963)
......+|+..++.+|++.|++++||++++ ++++|+|+|++|.+ .+++.+|++..+..
T Consensus 84 ~~~~~~~Gd~~p~~~R~~~~~~~~fpl~~~-~~~~t~ylRi~S~~~l~l~~~~~~~~~l~~ 143 (145)
T 3jyb_A 84 LVRDQHTGESRPFQERPLPSRSYLFSLPVD-GKPMTLYVRMTSNHPLMAWFDQIDEAGLVG 143 (145)
T ss_dssp EEEEEEESTTSCSCCCSCTTCCEEEEECCS-SSCEEEEEEEECSSCEEEEEEEEEHHHHTT
T ss_pred EEEEEECCCCCCCCCCCCCCCCCEEECCCC-CCCEEEEEEEECCCCEEEEEEEECHHHHHC
T ss_conf 278885377577433563566505751579-997899999953996487053218425320