HHsearch results for GI: 254780468 and protein with PDBid: 3k3c_A
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.15 E-value=5.5e-10 Score=96.00 Aligned_cols=130 Identities=10% Similarity=0.037 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEE-CCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 997488899999832593899998-7997899988899762899778338978988626976899999999999607897
Q gi|254780468|r 399 GIFSDGERQSLAVLGSGDIVWDWD-IVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRG 477 (963)
Q Consensus 399 ~l~~~~er~~~al~~s~~~i~~~d-~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~ 477 (963)
....+.|+++.++++++++++.+| .++.++++|+++.+++|++ ++.|. .+.+.+++.+.+.+...++........
T Consensus 11 ~~~~~~e~~r~l~e~~p~~i~i~d~~d~~i~~~N~~~~~~~G~~--~~~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (158)
T 3k3c_A 11 KTVGAAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQ--PAREVYPELEGQQIYEMLDRVYQTGEP 86 (158)
T ss_dssp HHTCCHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCTTC--CSTTS--BHHHHSGGGGGTTHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECHHHHHHCCCH--HHCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 88878999999997006564999999988999804756655967--75697--566668602344369999998751343
Q ss_pred E----EEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf 3----899999986999689998722676879998899999998530577312321663
Q gi|254780468|r 478 R----LQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN 532 (963)
Q Consensus 478 ~----~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~ 532 (963)
. ...+++....+|+.+|+..+..++++.+|++.+++++.+|||++|++++++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~DITe~k~ae~~l~~~ 145 (158)
T 3k3c_A 87 QSGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEAR 145 (158)
T ss_dssp EEEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHH
T ss_conf 22320012331134454036898643455658787022504899888999999999999