HHsearch results for GI: 254780468 and protein with PDBid: 3k3c_A

>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.15  E-value=5.5e-10  Score=96.00  Aligned_cols=130  Identities=10%  Similarity=0.037  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEE-CCCCEEEECHHHHHHHCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             997488899999832593899998-7997899988899762899778338978988626976899999999999607897
Q gi|254780468|r  399 GIFSDGERQSLAVLGSGDIVWDWD-IVRDRVTTTPDIATILGLASGSMHGPIRNWLPYIHINDRDNFRTILDSFVGYRRG  477 (963)
Q Consensus       399 ~l~~~~er~~~al~~s~~~i~~~d-~~~~~~~~n~~~~~~lG~~~~~l~~~~~~~~~~ihp~D~~~~~~~l~~~~~~~~~  477 (963)
                      ....+.|+++.++++++++++.+| .++.++++|+++.+++|++  ++.|.  .+.+.+++.+.+.+...++........
T Consensus        11 ~~~~~~e~~r~l~e~~p~~i~i~d~~d~~i~~~N~~~~~~~G~~--~~~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (158)
T 3k3c_A           11 KTVGAAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQ--PAREVYPELEGQQIYEMLDRVYQTGEP   86 (158)
T ss_dssp             HHTCCHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCTTC--CSTTS--BHHHHSGGGGGTTHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECHHHHHHCCCH--HHCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             88878999999997006564999999988999804756655967--75697--566668602344369999998751343


Q ss_pred             E----EEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf             3----899999986999689998722676879998899999998530577312321663
Q gi|254780468|r  478 R----LQYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQKKSLEGILCN  532 (963)
Q Consensus       478 ~----~~~e~r~r~~dG~~~w~~~~~~~i~~~~g~~~~~~g~~~DIt~~~~~~~~l~~~  532 (963)
                      .    ...+++....+|+.+|+..+..++++.+|++.+++++.+|||++|++++++++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~DITe~k~ae~~l~~~  145 (158)
T 3k3c_A           87 QSGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEAR  145 (158)
T ss_dssp             EEEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHH
T ss_conf             22320012331134454036898643455658787022504899888999999999999