RPSBLAST alignment for GI: 254780468 and conserved domain: smart00086
>gnl|CDD|128397 smart00086, PAC, Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain). PAC motif occurs C-terminal to a subset of all known PAS motifs. It is proposed to contribute to the PAS domain fold. Length = 43
Score = 41.8 bits (99), Expect = 8e-04
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 480 QYEFRVRAADNQFHWMIIRIRPMSNSNGDILRYIGIANDITEQ 522
E+R+R D + W+++ P+ + +G++ +G+ DITE+
Sbjct: 1 TVEYRLRRKDGSYIWVLVSASPIRDEDGEVEGILGVVRDITER 43