RPSBLAST alignment for GI: 254780468 and conserved domain: TIGR00254
>gnl|CDD|161790 TIGR00254, GGDEF, diguanylate cyclase (GGDEF) domain. The GGDEF domain is named for the motif GG[DE]EF shared by many proteins carrying the domain. There is evidence that the domain has diguanylate cyclase activity. Several proteins carrying this domain also carry domains with functions relating to environmental sensing. These include PleD, a response regulator protein involved in the swarmer-to-stalked cell transition in Caulobacter crescentus, and FixL, a heme-containing oxygen sensor protein. Length = 165
Score = 100 bits (252), Expect = 1e-21
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 533 AFQDNLTGIPNRQSFLDRLTTILDLSATDDNLRPTVMVIDIDKYKKINDVLGIAVGDDVL 592
A +D LTG+ NR+ + L + L + +V++IDID +KKIND LG VGD+VL
Sbjct: 2 AVRDPLTGLYNRRYLEEMLDSELKRARRF-QRSFSVLMIDIDNFKKINDTLGHDVGDEVL 60
Query: 593 VSLTRRIGELLKFPDILARLSGNRFGIILI--SENNSLKIADFAIAMRKSIAMPINLLER 650
+ R + ++ D++ R G F +IL ++L A+ + PI +
Sbjct: 61 REVARILQSSVRGSDVVGRYGGEEFVVILPGTPLEDALSKAER--LRDAINSKPIEVAGS 118
Query: 651 E-ITVTASIGFASWTSSKITSSEMLKNAELAMYHAKHRGGNHVESFR 696
E +TVT SIG A + +T E+LK A+ A+Y AK G N V
Sbjct: 119 ETLTVTVSIGVACYPGHGLTLEELLKRADEALYQAKKAGRNRVVVAD 165