RPSBLAST alignment of GI: 254780468 and protein with PDBid: 3pfm
>3pfm_A Ggdef domain protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics, EAL domain; 2.91A {Pseudomonas fluorescens} Length = 243
Score = 114 bits (287), Expect = 8e-26
Identities = 41/226 (18%), Positives = 91/226 (40%), Gaps = 11/226 (4%)
Query: 714 AVENSELYLVYHPIIRLMD-EEIVGLEALIQWDHPKWGNISSSEFMLIAEELCMIKAINL 772
A+ L + P++ D ++ + L + + I + F+ E ++L
Sbjct: 15 ALSEQHFQLYFQPVVAARDTHLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTSRLDL 74
Query: 773 FMLERIARDIISWRDQANMPPIFILINIASKDLLDNELCEGMQALISKTLYSPSRIKLSF 832
M + Q + +N+++ L D + ++ + R+ L
Sbjct: 75 LM-------LEQVLRQMASHEDCLALNLSAATLADPHALNRVFEILRQHSDLGPRLTLEI 127
Query: 833 SESVVMGNPERSRLLLGRLRKIGISLTLDDFGTKCSLLSYLGYIPFDTVKFNGSLMTGST 892
E + +L RLR++G SL+L FG + S++ L + +K +GS +
Sbjct: 128 GEEQLPEQAMLEQLTR-RLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRDID 186
Query: 893 EKRI--AILRSIIPMAKNIETTIIAKDIYGEIDIKELTRMGCDYIQ 936
++ + +I A +I+ +IA+ + E +++ + MG +Q
Sbjct: 187 QESDKRLFIEAIQRAAHSIDLPLIAERVETEGELQVIREMGLYGVQ 232