HHsearch alignment for GI: 254780470 and conserved domain: PRK12289

>PRK12289 ribosome-associated GTPase; Reviewed.
Probab=96.71  E-value=0.0081  Score=37.55  Aligned_cols=69  Identities=19%  Similarity=0.250  Sum_probs=52.9

Q ss_pred             CEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEE
Q ss_conf             45999789998158981799981667765333233544333445555444555554455568828999912511201647
Q gi|254780470|r    5 ETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRKHRIR   84 (110)
Q Consensus         5 d~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk~~IR   84 (110)
T Consensus         5 ~~~~l~G~Vi~~~-~~fY~V~~d~~~~---------------------------------~~~~~llC~~Rg~lrk~~~~   50 (351)
T PRK12289          5 TTAQLLGTVVAVQ-ANFYQVRLDQPPL---------------------------------NPPSLLLCTRRTRLKKIGQQ   50 (351)
T ss_pred             CCCCEEEEEEEEE-CCEEEEEECCCCC---------------------------------CCCCEEEEEEEEEECCCCCC
T ss_conf             5674389999777-8679999546766---------------------------------77734667875664268998


Q ss_pred             EECCCEEEEEECCCCCCCCEEEE
Q ss_conf             70299699997467578435988
Q gi|254780470|r   85 ISLGDKVKVAMNPYDMTRARITY  107 (110)
Q Consensus        85 Il~GDkV~Ve~SPYDLtkGRIty  107 (110)
T Consensus        51 v~VGD~V~ve~~d~~~~~G~I~~   73 (351)
T PRK12289         51 VMVGDRVVVEEPDWQGQRGAIAE   73 (351)
T ss_pred             CCCCCEEEEEECCCCCCEEEEEE
T ss_conf             76577799964178898188968