HHsearch alignment of GI: 254780470 and MMDB domain: 1d7q_A_
>1d7q_A (A:) Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein; NMR {Homo sapiens}
Probab=99.72 E-value=1.8e-17 Score=122.37 Aligned_cols=71 Identities=18% Similarity=0.323 Sum_probs=66.9
Q ss_pred CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r 1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK 80 (110)
Q Consensus 1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk 80 (110)
|++++..++.|+|+++|+|+.|+|++ .||..++|+++||||+
T Consensus 25 ~~~~~~~e~~g~V~~~lG~~~~~V~~--------------------------------------~dg~~~l~~ipgK~Rk 66 (143)
T 1d7q_A 25 LVFKEDGQEYAQVIKMLGNGRLEAMC--------------------------------------FDGVKRLCHIRGKLRK 66 (143)
T ss_dssp CCCCCTTEEEEEEEEECSSSEEEEEE--------------------------------------TTTEEEEEECCSGGGG
T ss_pred CCCCCCCEEEEEEEEECCCCEEEEEE--------------------------------------CCCCEEEEEECCCCEE
T ss_conf 14699981899999973997899997--------------------------------------8998999996266402
Q ss_pred EEEEEECCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf 164770299699997467578435988429
Q gi|254780470|r 81 HRIRISLGDKVKVAMNPYDMTRARITYRFK 110 (110)
Q Consensus 81 ~~IRIl~GDkV~Ve~SPYDLtkGRItyR~K 110 (110)
+|+|..||.|.|+++|||++||+|+|||.
T Consensus 67 -~iwI~~GD~VlVe~~~~~~~kg~Iv~r~~ 95 (143)
T 1d7q_A 67 -KVWINTSDIILVGLRDYQDNKADVILKYN 95 (143)
T ss_dssp -SCCCCTTCEEEEECSSSSSSCCEEEEEEC
T ss_pred -EEEEECCCEEEEECCCCCCCEEEEEEECC
T ss_conf -57980799999941567685789999779