HHsearch alignment of GI: 254780470 and MMDB domain: 1jt8_A_

>1jt8_A (A:) EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii}
Probab=99.63  E-value=1e-16  Score=117.96  Aligned_cols=71  Identities=27%  Similarity=0.488  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf             97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r    1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK   80 (110)
Q Consensus         1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk   80 (110)
                      |++.+..++.|.|+++|+|+.|+|++.                                      ||+.++|+++||||+
T Consensus        14 ~~~~~~~e~~~~V~~~lG~~~~~V~~~--------------------------------------~G~~~la~i~gK~rk   55 (102)
T 1jt8_A           14 IPRKEENEILGIIEQMLGASRVRVRCL--------------------------------------DGKTRLGRIPGRLKN   55 (102)
T ss_dssp             CSCCSSCCEEEEEECSSCSSEEEEEEE--------------------------------------TTEEEEEECCHHHHH
T ss_pred             CCCCCCCEEEEEEEEECCCCEEEEEEC--------------------------------------CCCEEEEEECCCEEE
T ss_conf             799988989999999829988999979--------------------------------------999999998476020


Q ss_pred             EEEEEECCCEEEEEECCCCC-CCCEEEEEEC
Q ss_conf             16477029969999746757-8435988429
Q gi|254780470|r   81 HRIRISLGDKVKVAMNPYDM-TRARITYRFK  110 (110)
Q Consensus        81 ~~IRIl~GDkV~Ve~SPYDL-tkGRItyR~K  110 (110)
                       +|+|..||.|.|+++|||+ +||+|+|||+
T Consensus        56 -~iwI~~GD~VlV~~~~~~~k~kg~Iv~r~~   85 (102)
T 1jt8_A           56 -RIWVREGDVVIVKPWEVQGDQKCDIIWRYT   85 (102)
T ss_dssp             -HHCCCSCEEEEECCBCCTTSEEEEEEEESS
T ss_pred             -EEEECCCCEEEEEEECCCCCCEEEEEEECC
T ss_conf             -158559999999951178996799999889