HHsearch results for GI: 254780470 and protein with PDBid: 1jt8_A

>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=99.30  E-value=7.4e-13  Score=94.63  Aligned_cols=71  Identities=27%  Similarity=0.488  Sum_probs=64.4

Q ss_pred             CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf             97564599978999815898179998166776533323354433344555544455555445556882899991251120
Q gi|254780470|r    1 MPKEETLEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRK   80 (110)
Q Consensus         1 M~Ked~ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk   80 (110)
                      ||+++-.|+-|+|+++|+|++|+|.+.                                      ||...+|++.||||+
T Consensus        14 lp~~ee~e~y~~V~k~lG~~~~~V~c~--------------------------------------dg~~rl~~irGK~Rk   55 (102)
T 1jt8_A           14 IPRKEENEILGIIEQMLGASRVRVRCL--------------------------------------DGKTRLGRIPGRLKN   55 (102)
T ss_dssp             CSCCSSCCEEEEEECSSCSSEEEEEEE--------------------------------------TTEEEEEECCHHHHH
T ss_pred             CCCCCCCEEEEEEEEECCCCEEEEEEC--------------------------------------CCCEEEEEECCCCCC
T ss_conf             799978989999999839988999979--------------------------------------999999998666111


Q ss_pred             EEEEEECCCEEEEEECCCCC-CCCEEEEEEC
Q ss_conf             16477029969999746757-8435988429
Q gi|254780470|r   81 HRIRISLGDKVKVAMNPYDM-TRARITYRFK  110 (110)
Q Consensus        81 ~~IRIl~GDkV~Ve~SPYDL-tkGRItyR~K  110 (110)
                       +++|.+||.|.|++++|+. +||+|+|||.
T Consensus        56 -~~~I~~Gd~VlV~~r~~~~~~K~dIl~~Y~   85 (102)
T 1jt8_A           56 -RIWVREGDVVIVKPWEVQGDQKCDIIWRYT   85 (102)
T ss_dssp             -HHCCCSCEEEEECCBCCTTSEEEEEEEESS
T ss_pred             -CEEECCCCEEEEEEEECCCCCEEEEEEECC
T ss_conf             -249649999999972178996699999989