HHsearch results for GI: 254780470 and protein with PDBid: 2oqk_A
>2oqk_A Putative translation initiation factor EIF-1A; malaria, eukaryotic initiation factor (EIF), SGC, structural genomics; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.15 E-value=3.5e-11 Score=84.90 Aligned_cols=65 Identities=22% Similarity=0.380 Sum_probs=59.6
Q ss_pred EEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEE
Q ss_conf 99978999815898179998166776533323354433344555544455555445556882899991251120164770
Q gi|254780470|r 7 LEFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNAVVIAYTAGRMRKHRIRIS 86 (110)
Q Consensus 7 ie~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~~VlA~isGKmRk~~IRIl 86 (110)
-|+-|+|+++|+|++|+|.+. ||...+|++.||||+ +++|.
T Consensus 32 ~e~ya~V~k~lG~~~~~V~~~--------------------------------------dg~~~l~~irgkfrk-r~~i~ 72 (117)
T 2oqk_A 32 GQEYGQVQRMLGNGRLDAYCF--------------------------------------DGQKRLCHIRGKMRK-KVWVN 72 (117)
T ss_dssp TEEEEEEEEEEETTEEEEEET--------------------------------------TSCEEEEECCHHHHH-HSCCC
T ss_pred CEEEEEEEEECCCCEEEEEEC--------------------------------------CCCEEEEEECCHHCC-CEEEC
T ss_conf 858999999749978999978--------------------------------------999999998512107-52856
Q ss_pred CCCEEEEEECCCCCCCCEEEEEEC
Q ss_conf 299699997467578435988429
Q gi|254780470|r 87 LGDKVKVAMNPYDMTRARITYRFK 110 (110)
Q Consensus 87 ~GDkV~Ve~SPYDLtkGRItyR~K 110 (110)
+||-|.|++++|+.+||.|+|+|.
T Consensus 73 ~Gd~VlV~~r~~e~~k~dIi~~Y~ 96 (117)
T 2oqk_A 73 PGDIVLVSLRDFQDSKGDIILKYT 96 (117)
T ss_dssp TTCEEEEEECTTCTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCCEEEEEEECC
T ss_conf 999999954528886899999889