HHSEARCH alignment of GI: 254780470 and SCOP domain: d2ix0a3

Alignment
>d2ix0a3 b.40.4.5 (A:558-644) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=94.80  E-value=0.023  Score=32.24  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             EEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEEC--CCE-EEEEE
Q ss_conf             9978999815898179998166776533323354433344555544455555445556882-8999912--511-20164
Q gi|254780470|r    8 EFSGIVSELLPNANFRVKLITNDDDSSADCKLDSKVKSNFSESGSESGNDGVDPISYLDNA-VVIAYTA--GRM-RKHRI   83 (110)
Q Consensus         8 e~~G~V~E~LPna~FrV~L~~~d~~~~~~~~l~~~~~~~f~~~g~~~g~~g~~~~s~~~~~-~VlA~is--GKm-Rk~~I   83 (110)
                      +|+|+|+.+.+.+.| |+|++                         ++-+|.-|+|.+.+- ...-.-.  ... |+..-
T Consensus         6 ~F~g~Is~v~~~Gif-V~L~e-------------------------~~~eGlI~~s~L~~d~y~~d~~~~~l~~~~~~~~   59 (87)
T d2ix0a3           6 RFAAEIVDISRGGMR-VRLVD-------------------------NGAIAFIPAPFLHAVRDELVCSQENGTVQIKGET   59 (87)
T ss_dssp             CEEEEEEEEETTEEE-EEETT-------------------------TCCEEEEEGGGTCSCGGGEEEETTTTEEEETTEE
T ss_pred             EEEEEEEEEECCEEE-EEEEC-------------------------CCCEEEEEEHHCCCCEEEEECCCEEEEEEECCCE
T ss_conf             898999999857099-99935-------------------------7839999904478832999233408888872309


Q ss_pred             EEECCCEEEEEECCCCCCCCEEEEE
Q ss_conf             7702996999974675784359884
Q gi|254780470|r   84 RISLGDKVKVAMNPYDMTRARITYR  108 (110)
Q Consensus        84 RIl~GDkV~Ve~SPYDLtkGRItyR  108 (110)
                      ..-+||+|+|.+.-.|..++||.++
T Consensus        60 ~~~~Gd~V~V~v~~vd~~~r~I~~~   84 (87)
T d2ix0a3          60 VYKVTDVIDVTIAEVRMETRSIIAR   84 (87)
T ss_dssp             EEETTCEEEEEEEEEETTTTEEEEE
T ss_pred             EEECCCEEEEEEEEEECCCCEEEEE
T ss_conf             9988999999999982302949999


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Exoribonuclease 2, RNB
species: Escherichia coli [TaxId: 562]