HHsearch alignment for GI: 254780471 and conserved domain: PRK10582
>PRK10582 cytochrome o ubiquinol oxidase subunit IV; Provisional.
Probab=100.00 E-value=0 Score=277.76 Aligned_cols=108 Identities=46% Similarity=0.814 Sum_probs=101.7
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 98788889877788852568999999999999999999806578846999999999999999999999704778765025
Q gi|254780471|r 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80 (119)
Q Consensus 1 m~~~~~h~~~~~~hgs~k~yliGFiLsiiLT~iaF~lV~~~~~~~~~~~~~~I~~~Av~Qi~VqL~~FLHl~~~~~~~~n 80 (119)
T Consensus 1 ~sh~~--~~~~~~Hgs~ksY~iGFvLsviLT~ipF~lVm~~~~-~~~~~~~~i~~~AvvQi~VhLvyFLHl~~~~~~~wn 77 (109)
T PRK10582 1 MSHST--DHGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAA-SPAVILGTILAMAVVQILVHLVCFLHMNTKSDEGWN 77 (109)
T ss_pred CCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 98877--889988875999999999999999999999980767-821599999999999999999996105788765424
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999999999999851130489
Q gi|254780471|r 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111 (119)
Q Consensus 81 ~~a~~Ft~~ii~iiv~GSiWIM~~l~~nMMp 111 (119)
T Consensus 78 ~~a~~Ft~~ii~I~v~GSiWIM~~ln~nMM~ 108 (109)
T PRK10582 78 MTAFVFTVLIIAILVVGSIWIMWNLNYNMMM 108 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
T ss_conf 8999999999999998699999620865117