BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780471|ref|YP_003064884.1| cytochrome o ubiquinol oxidase
subunit IV [Candidatus Liberibacter asiaticus str. psy62]
(119 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|114707979|ref|ZP_01440871.1| Prokaryotic Cytochrome C oxidase subunit IV [Fulvimarina pelagi
HTCC2506]
gi|114536608|gb|EAU39740.1| Prokaryotic Cytochrome C oxidase subunit IV [Fulvimarina pelagi
HTCC2506]
Length = 223
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 69/112 (61%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H ++ T L GF LS++LT +PF +VM D L +V A+AQI VH+
Sbjct: 19 SHGEGGEAHATLSGYLTGFGLSVVLTAVPFWLVMARPIEDGVTTALLVVSLAVAQIFVHM 78
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
++FLHM K E GW+IMA+IFT ++V I GS+WVM+HLN NMM M M+
Sbjct: 79 IYFLHMDAKSEGGWTIMALIFTAVLVIITISGSLWVMFHLNRNMMPMGDMQM 130
>gi|218532589|ref|YP_002423405.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
chloromethanicum CM4]
gi|218524892|gb|ACK85477.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
chloromethanicum CM4]
Length = 126
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 54/116 (46%), Positives = 75/116 (64%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D+ H + H +G+ K + GF+LS+ILT IPF +VM DK I + I+ QI+V
Sbjct: 9 DHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVV 68
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
H+++FLHM+TK E GW+ MA+IFTI +V I GS+WVM+HLN NMM + H
Sbjct: 69 HMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEIRH 124
>gi|163853731|ref|YP_001641774.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
extorquens PA1]
gi|240141156|ref|YP_002965636.1| cytochrome o ubiquinol oxidase, subunit IV [Methylobacterium
extorquens AM1]
gi|254563668|ref|YP_003070763.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
extorquens DM4]
gi|163665336|gb|ABY32703.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
extorquens PA1]
gi|240011133|gb|ACS42359.1| cytochrome o ubiquinol oxidase, subunit IV [Methylobacterium
extorquens AM1]
gi|254270946|emb|CAX26951.1| cytochrome o ubiquinol oxidase, subunit IV [Methylobacterium
extorquens DM4]
Length = 126
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/116 (46%), Positives = 75/116 (64%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D+ H + H +G+ K + GF+LS+ILT IPF +VM DK I + I+ QI+V
Sbjct: 9 DHGHGQDAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLGAVQIVV 68
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
H+++FLHM+TK E GW+ MA+IFTI +V I GS+WVM+HLN NMM + H
Sbjct: 69 HMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMPISPEEMRH 124
>gi|33593692|ref|NP_881336.1| cytochrome ubiquinol oxidase subunit IV [Bordetella pertussis
Tohama I]
gi|33595767|ref|NP_883410.1| cytochrome ubiquinol oxidase subunit IV [Bordetella parapertussis
12822]
gi|33600293|ref|NP_887853.1| cytochrome ubiquinol oxidase subunit IV [Bordetella bronchiseptica
RB50]
gi|33563765|emb|CAE43005.1| cytochrome ubiquinol oxidase subunit IV [Bordetella pertussis
Tohama I]
gi|33565846|emb|CAE36392.1| cytochrome ubiquinol oxidase subunit IV [Bordetella parapertussis]
gi|33567892|emb|CAE31805.1| cytochrome ubiquinol oxidase subunit IV [Bordetella bronchiseptica
RB50]
gi|332383096|gb|AEE67943.1| cytochrome ubiquinol oxidase subunit IV [Bordetella pertussis CS]
Length = 135
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H + +GT L GF+L+ ILT IPF +VM G F L I+ A+ QI+VH
Sbjct: 19 HHHEDDDGPHGTLASYLTGFVLAAILTAIPFWLVMDGVFASSRTTALVILAFAVVQIVVH 78
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
LV+FLHM K E GW+++A+IFT+++V I GS+W+MYHLN+NMM M +R++
Sbjct: 79 LVYFLHMDAKSESGWNMLALIFTLVLVVITLSGSIWIMYHLNSNMMPMSVHDVRNM 134
>gi|329915608|ref|ZP_08276292.1| Cytochrome O ubiquinol oxidase subunit IV [Oxalobacteraceae
bacterium IMCC9480]
gi|327544869|gb|EGF30239.1| Cytochrome O ubiquinol oxidase subunit IV [Oxalobacteraceae
bacterium IMCC9480]
Length = 180
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/110 (49%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
++D H+ + +G+ K L GFIL++ILT IPF +V+ F + L ++ A QI
Sbjct: 17 EHDESHHTHA-DHGSVKSYLTGFILAVILTAIPFWVVLGKVFEKSSTTALVVLGFAAVQI 75
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+VH+V+FLHM+TK E GWSI+A+IFT I+V I GS+WVMYHLN+NMM
Sbjct: 76 VVHMVYFLHMNTKSEGGWSILALIFTTILVVIMLSGSIWVMYHLNHNMMP 125
>gi|116694973|ref|YP_729184.1| bo3-type chinol oxidase, subunit IV [Ralstonia eutropha H16]
gi|113529472|emb|CAJ95819.1| bo3-type chinol oxidase, subunit IV [Ralstonia eutropha H16]
Length = 141
Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 73/112 (65%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H+ ++ + T L GF+LS+ LT IPF +VM F + + I+L QI+
Sbjct: 13 HSHGHDEDVGPHATLGGYLTGFVLSVFLTAIPFWLVMGKVFDKSSTTAIVILLIGAVQIV 72
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114
VH+++FLHM+ + E GW++++++FT+++V I GS+WVM+HLN+NMM
Sbjct: 73 VHMIYFLHMNARSEGGWNMLSLMFTLVLVVITLTGSLWVMFHLNSNMMPTMQ 124
>gi|124266931|ref|YP_001020935.1| cytochrome ubiquinol oxidase subunit IV [Methylibium petroleiphilum
PM1]
gi|124259706|gb|ABM94700.1| cytochrome ubiquinol oxidase subunit IV [Methylibium petroleiphilum
PM1]
Length = 127
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H + +G+ K ++GF+LSL+LT IPF +VM + L I+ A QI+
Sbjct: 9 HHDGHEGDEAGHGSLKGYVIGFMLSLVLTAIPFWLVMGKVIASSGLTALVILGFAAVQIV 68
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS--MEGMRSI 118
VH+V+FLHM+ K E GW+I+A+IFT+++V I GS+WVMYHLN+NMM M +R++
Sbjct: 69 VHMVYFLHMNAKSEGGWTILALIFTLVLVVITLSGSLWVMYHLNHNMMPASMHEVRNM 126
>gi|331640947|ref|ZP_08342082.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H736]
gi|331651365|ref|ZP_08352390.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M718]
gi|331671975|ref|ZP_08372771.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA280]
gi|331676100|ref|ZP_08376812.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H591]
gi|332281579|ref|ZP_08393992.1| cytochrome o ubiquinol oxidase C subunit [Shigella sp. D9]
gi|1773113|gb|AAB40185.1| cytochrome o ubiquinol oxidase C subunit [Escherichia coli]
gi|331037745|gb|EGI09965.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H736]
gi|331051106|gb|EGI23158.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M718]
gi|331070964|gb|EGI42323.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA280]
gi|331076158|gb|EGI47440.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H591]
gi|332103931|gb|EGJ07277.1| cytochrome o ubiquinol oxidase C subunit [Shigella sp. D9]
Length = 136
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 28 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 84
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 85 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 134
>gi|296444724|ref|ZP_06886687.1| cytochrome o ubiquinol oxidase subunit IV [Methylosinus
trichosporium OB3b]
gi|296257672|gb|EFH04736.1| cytochrome o ubiquinol oxidase subunit IV [Methylosinus
trichosporium OB3b]
Length = 378
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 9 MNMHSYG---TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
M+ +G +GF+L+++LT F +V F I+ + AIAQI VHL
Sbjct: 17 MDAPGHGLREGLLTYSIGFVLAVLLTAASFYLVRTTFIWGPGIIMALV-ALAIAQIGVHL 75
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
VFFLH++T ++ + +A+ F +++V + GS+W+M HL +N+M M +
Sbjct: 76 VFFLHLTTAPDNTNNALALAFGVLIVTLVVGGSLWIMSHLAHNVMPDRMMARM 128
>gi|237730406|ref|ZP_04560887.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter sp. 30_2]
gi|226905945|gb|EEH91863.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter sp. 30_2]
Length = 136
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 28 MSHSN--ESGGASHGSVKTYMTGFILSIILTVIPFWMVMTGSASP-AVILGTILAMAVVQ 84
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM++K ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 85 ILVHLVCFLHMNSKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 134
>gi|117622689|ref|YP_851602.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli APEC
O1]
gi|331645603|ref|ZP_08346707.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M605]
gi|115511813|gb|ABI99887.1| cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli APEC
O1]
gi|331045765|gb|EGI17891.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli M605]
Length = 136
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 28 MSHSNA--SSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 84
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 85 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 134
>gi|239817019|ref|YP_002945929.1| cytochrome o ubiquinol oxidase subunit IV [Variovorax paradoxus
S110]
gi|239803596|gb|ACS20663.1| cytochrome o ubiquinol oxidase subunit IV [Variovorax paradoxus
S110]
Length = 129
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+D+ H+ S+ T K + GF+L+++LT IPF +VM + L I+ A QI
Sbjct: 10 AHDDHHDDGPVSHSTFKGYMTGFVLAVVLTAIPFWLVMGNVLGKPSTTSLVILGFAAVQI 69
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
+VH+++FLHM K E GW+++A+IFTI++V I GS+WVMYH+N NMM M M+++
Sbjct: 70 VVHMIYFLHMDAKSESGWNMLALIFTIVLVVITLAGSLWVMYHMNANMMPMSVHDMKNM 128
>gi|170743800|ref|YP_001772455.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium sp.
4-46]
gi|168198074|gb|ACA20021.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium sp.
4-46]
Length = 140
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + H ++G+ + + GF+LS+ILT IPF +VM D + + I+ A QI
Sbjct: 22 AHGSAH-HPGGAHGSFRGYVTGFVLSVILTAIPFWLVMANTLDDTLVTSIVIMALAAVQI 80
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
+VH+++FLHM+TK E GW+ MA++FT+ +V I GS+WVMYH++ NMM M
Sbjct: 81 VVHMIYFLHMNTKSEGGWTFMALVFTLTLVVITLAGSIWVMYHMDQNMMPM 131
>gi|16126014|ref|NP_420578.1| ubiquinol oxidase subunit IV [Caulobacter crescentus CB15]
gi|221234785|ref|YP_002517221.1| quinol cytochrome oxidase polypeptide IV [Caulobacter crescentus
NA1000]
gi|13423196|gb|AAK23746.1| ubiquinol oxidase subunit IV [Caulobacter crescentus CB15]
gi|220963957|gb|ACL95313.1| quinol cytochrome oxidase polypeptide IV [Caulobacter crescentus
NA1000]
Length = 129
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/118 (38%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+D + + ++GT K ++GF+L++ILT IPF +VM + + ++ A+ Q++
Sbjct: 11 HDEHGDAHEAAHGTLKDYVIGFVLAVILTAIPFWLVMGDVLPSAQMTAVAVMGLAVIQVV 70
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS--MEGMRSI 118
VH+++FLHM+T+ E GW+++A+IFT+I+V I GS+WVM++LN +MM M MR
Sbjct: 71 VHMIYFLHMNTRSEGGWTMLALIFTLILVVITLAGSLWVMHNLNTHMMPEMMPDMRQA 128
>gi|319786908|ref|YP_004146383.1| cytochrome o ubiquinol oxidase subunit IV [Pseudoxanthomonas
suwonensis 11-1]
gi|317465420|gb|ADV27152.1| cytochrome o ubiquinol oxidase subunit IV [Pseudoxanthomonas
suwonensis 11-1]
Length = 139
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 44/107 (41%), Positives = 73/107 (68%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
H + ++G+ + ++GF+LS+ILT IPF +VM D+ L I+ A+ QI+V
Sbjct: 22 EHHAHDEGAHGSMRDYVIGFVLSVILTAIPFWLVMGNVIQDQGTTALVILGFAVVQIVVQ 81
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+V+FLHM+ + E GW+++A++FT+++V I GS+WVM+H+N NMM
Sbjct: 82 MVYFLHMNARSEGGWNMLALMFTVVLVVIVLAGSLWVMHHMNANMMP 128
>gi|284006411|emb|CBA71647.1| cytochrome O ubiquinol oxidase protein [Arsenophonus nasoniae]
Length = 132
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M Y N + S+G+ K L+GFILS+ILT++PF +VM + + ++ AIAQ
Sbjct: 23 MSYTNT-PHSGASHGSMKTYLIGFILSIILTVVPFWMVMNSTA-SHDTILWIVIGTAIAQ 80
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+T +D W+++A +FT++++ I +GS+W+MY+LN NMM
Sbjct: 81 ILVHLVCFLHMNTSSDDRWNLVAFLFTMLIIGIVVIGSLWIMYNLNINMM 130
>gi|260221199|emb|CBA29525.1| Cytochrome o ubiquinol oxidase protein cyoD [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 148
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 71/110 (64%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D+ H+ + T + GF+LS+ILT IPF +VM D+ L + A+ QI+V
Sbjct: 18 DDGHHAANEPHSTFSGYMTGFVLSIILTAIPFWLVMAKVITDRPTAVLVLGGFAVVQILV 77
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
H+V+FLHM+ K+E GW++++ IFT++ VAI G++WVM+H+N NMM
Sbjct: 78 HMVYFLHMNGKIEGGWTLLSTIFTVVFVAIAITGTLWVMFHMNANMMPTH 127
>gi|17988181|ref|NP_540815.1| cytochrome O ubiquinol oxidase operon protein CYOD [Brucella
melitensis bv. 1 str. 16M]
gi|17983942|gb|AAL53079.1| cytochrome o ubiquinol oxidase operon protein cyod [Brucella
melitensis bv. 1 str. 16M]
Length = 148
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+
Sbjct: 29 SSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 87
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
VHL++FL++ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 88 VHLIYFLYLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 141
>gi|319898316|ref|YP_004158409.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella clarridgeiae
73]
gi|319402280|emb|CBI75819.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella clarridgeiae
73]
Length = 209
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73
+ LVGFIL+++ T+ F VM G I I + A+ QIIV +VFFLH+++
Sbjct: 12 SIGSYLVGFILAVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIVQIVFFLHLNS 71
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W+I+ ++FT + V + G+ W + HLN NMM
Sbjct: 72 GPDAKWNIVTLLFTAMCVFVIIGGTWWAISHLNYNMM 108
>gi|300715583|ref|YP_003740386.1| cytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase
chain D) [Erwinia billingiae Eb661]
gi|299061419|emb|CAX58531.1| Cytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase
chain D) [Erwinia billingiae Eb661]
Length = 109
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/108 (43%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ N + S+G+ K ++GFILS+ILT IPF +VM G K + +++CAI Q++V
Sbjct: 2 SHSTNEHGASHGSVKSYMIGFILSIILTAIPFWMVMDGGA-SKATILGVVIVCAIVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLH++T E+ W+++A++F+ I++ I VGS+W+M++LN NMM+
Sbjct: 61 HLVYFLHLNTSSEERWNLVAIVFSAIIILIVVVGSLWIMWNLNYNMMA 108
>gi|300311776|ref|YP_003775868.1| ubiquinol oxidase subunit IV protein [Herbaspirillum seropedicae
SmR1]
gi|300074561|gb|ADJ63960.1| ubiquinol oxidase subunit IV protein [Herbaspirillum seropedicae
SmR1]
Length = 158
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 68/103 (66%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K + GF+L++ILT IPF +VM M + ++ A QI+VH+ +FLHM+ K
Sbjct: 33 TMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALAAVQIVVHIKYFLHMNGKS 92
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
E GW+++AMIFTI++V I GS+WVMYHLN+NMM ++
Sbjct: 93 EGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPENM 135
>gi|187928955|ref|YP_001899442.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J]
gi|187725845|gb|ACD27010.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J]
Length = 142
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 45/98 (45%), Positives = 67/98 (68%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ T L GF+LS+ LT IPF +VM F + +TI+L QI+VH+++FLHM+
Sbjct: 27 HATLGGYLTGFVLSVFLTAIPFWLVMANVFDRSSTTAVTILLIGAVQIVVHMIYFLHMNA 86
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
K E GW++++++FT+++V I GS+WVMYHLN NMM
Sbjct: 87 KSEGGWNMLSLMFTLVLVVITLSGSLWVMYHLNTNMMP 124
>gi|254780471|ref|YP_003064884.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040148|gb|ACT56944.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter
asiaticus str. psy62]
Length = 119
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ
Sbjct: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH
Sbjct: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
>gi|254420203|ref|ZP_05033927.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas sp. BAL3]
gi|196186380|gb|EDX81356.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas sp. BAL3]
Length = 131
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 3/119 (2%)
Query: 2 KYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
++ H H++G+ + ++GF+LS+ILT IPF +VM G + L ++ A+ Q
Sbjct: 12 SHEVDHLGHEAHNHGSFRSYMIGFVLSVILTAIPFALVMTGALPPQA-TALIVMAFAVVQ 70
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS-MEGMRSI 118
I+VH+++FLHM++K E GW+++A+IFTII+V I GS+WVMYHLN NMM M +
Sbjct: 71 IVVHMIYFLHMNSKSEGGWTMLALIFTIIVVVIALSGSLWVMYHLNTNMMPATHEMSQM 129
>gi|153007396|ref|YP_001368611.1| cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum anthropi
ATCC 49188]
gi|151559284|gb|ABS12782.1| Cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum anthropi
ATCC 49188]
Length = 122
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + S+G+ K L+GF+L+++LT++PF + M G+F ++ A+ Q
Sbjct: 1 MSSAHETHDHGASHGSLKTYLIGFVLAVVLTVVPFMLAMNGYFTP-GTTAAIVLGIAVVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
I+VHLV+FLH+ K E GW+I+A+IFT+I++AI GS+WVM+HL+ NMM M
Sbjct: 60 ILVHLVYFLHLDPKSEGGWNILALIFTVIILAIVLAGSIWVMHHLDTNMMPMYMSP 115
>gi|226329082|ref|ZP_03804600.1| hypothetical protein PROPEN_02985 [Proteus penneri ATCC 35198]
gi|225202268|gb|EEG84622.1| hypothetical protein PROPEN_02985 [Proteus penneri ATCC 35198]
Length = 110
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/110 (47%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N + + S+G+ K L+GFILS+ILT+IPF +VM+G I+ T+V A+ Q
Sbjct: 1 MSHPNT-SPSGASHGSMKSYLIGFILSVILTVIPFWMVMEGTATPATIL-WTVVGMAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+T E+ W+++A +FT++++ I VGS+W+MY+LN NMM
Sbjct: 59 IVVHLVCFLHMNTSSEERWNVVAFLFTLLIIGIVVVGSLWIMYNLNINMM 108
>gi|241667024|ref|YP_002985108.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240862481|gb|ACS60146.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 133
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT + + GF+LS+ILT IPF +VM G F + + ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFVLSIILTAIPFWLVMSGVFESPAVTAVLVMGLGAIQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH+VFFLHM+T+ E GW+IMA+IFT+I+VAI GS+WVM+HLN NMM M E M+++
Sbjct: 75 VHMVFFLHMNTRSEGGWTIMALIFTLIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|158423725|ref|YP_001525017.1| cytochrome o ubiquinol oxidase subunit IV [Azorhizobium caulinodans
ORS 571]
gi|158330614|dbj|BAF88099.1| cytochrome o ubiquinol oxidase subunit IV [Azorhizobium caulinodans
ORS 571]
Length = 132
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/112 (47%), Positives = 76/112 (67%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ + H +G+ K + GFILS+ILT IPF +VM + + + I+ A+ QI+VH
Sbjct: 18 HGAHGEDHGHGSFKSYMTGFILSVILTAIPFWLVMTNALGNNQLTAIVIMAFAVVQIVVH 77
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
+++FLHM+ KVE GWS++A+IFT+I+V I GS+WVMYHLN NMM MR
Sbjct: 78 MIYFLHMTGKVEGGWSMLALIFTVIVVVIALSGSLWVMYHLNANMMPSHDMR 129
>gi|262375302|ref|ZP_06068535.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter lwoffii
SH145]
gi|262309556|gb|EEY90686.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter lwoffii
SH145]
Length = 123
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 53/110 (48%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +D HN S+G KQ VGFILS+ILT+IPFG+VM G F + I+ I + A+AQ
Sbjct: 16 MSHD--HNAAGESHGNVKQYTVGFILSVILTVIPFGMVMAGGF-GRGILITVIAITAVAQ 72
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V L++FLHM++ E W+++A ++TI+ +AI VGS+W+M +L+ NMM
Sbjct: 73 ILVQLIYFLHMNSSSEQRWNVIAFVYTILTIAILLVGSVWIMNYLHYNMM 122
>gi|110834895|ref|YP_693754.1| cytochrome o ubiquinol oxidase, protein CyoD [Alcanivorax
borkumensis SK2]
gi|110648006|emb|CAL17482.1| cytochrome o ubiquinol oxidase, protein CyoD [Alcanivorax
borkumensis SK2]
Length = 131
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 74/110 (67%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+D+ HN + + K+ GF+L++ILT+IPF +VM G F + I+ A+ QI
Sbjct: 5 THDHDHNDADIPHVSLKEYATGFVLAVILTVIPFWLVMGGVFESSATTVMVILGFALVQI 64
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+VH+VFFLHM+ E GW+++A++FT+I+V I GS+WVM++LN NMM
Sbjct: 65 VVHMVFFLHMNFHSEGGWNMLALMFTLILVFITLAGSLWVMHNLNVNMMP 114
>gi|170748152|ref|YP_001754412.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
radiotolerans JCM 2831]
gi|170654674|gb|ACB23729.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
radiotolerans JCM 2831]
Length = 134
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/114 (44%), Positives = 75/114 (65%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H + +GT + + GF+LS+ILT+IPF +VM + + L I+ Q++VH
Sbjct: 17 DAHAHSEGGHGTFQSYMTGFVLSVILTVIPFWLVMGNVLDNSLVTTLVILALGGVQMVVH 76
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
+++FLHMSTK E GW+ MA+IFTI +V I GS+WVMYHLN+NMM M+ +
Sbjct: 77 VIYFLHMSTKSEGGWTFMALIFTITLVVIMLAGSVWVMYHLNHNMMPMDAHDVM 130
>gi|189010631|ref|ZP_03006400.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4076]
gi|189403117|ref|ZP_03006965.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4486]
gi|189404836|ref|ZP_03007598.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC869]
gi|193068714|ref|ZP_03049675.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
E110019]
gi|194428823|ref|ZP_03061358.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B171]
gi|194432628|ref|ZP_03064914.1| cytochrome o ubiquinol oxidase, subunit IV [Shigella dysenteriae
1012]
gi|194438861|ref|ZP_03070946.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 101-1]
gi|208807081|ref|ZP_03249418.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4206]
gi|208822824|ref|ZP_03263142.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4042]
gi|217326573|ref|ZP_03442657.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. TW14588]
gi|188999375|gb|EDU68361.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4076]
gi|189362449|gb|EDU80868.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4486]
gi|189373698|gb|EDU92114.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC869]
gi|192958077|gb|EDV88519.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
E110019]
gi|194413126|gb|EDX29413.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B171]
gi|194419189|gb|EDX35272.1| cytochrome o ubiquinol oxidase, subunit IV [Shigella dysenteriae
1012]
gi|194422155|gb|EDX38157.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 101-1]
gi|208726882|gb|EDZ76483.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4206]
gi|208737017|gb|EDZ84701.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4042]
gi|217322794|gb|EEC31218.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. TW14588]
Length = 124
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 16 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 72
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 73 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 122
>gi|91975078|ref|YP_567737.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris BisB5]
gi|91681534|gb|ABE37836.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris BisB5]
Length = 130
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/115 (46%), Positives = 77/115 (66%), Gaps = 2/115 (1%)
Query: 3 YDNIHNMN--MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
+D+ H + H++GT K L+GF LS++LT IPF +VM +K L I+ A Q
Sbjct: 13 HDHGHEAHVAAHNHGTLKSYLIGFGLSVVLTAIPFWLVMGDVLGNKQATGLVIMAFAAVQ 72
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
I+VH+++FLHM+T E+GW++MA+IFTI+MV I GS+WVM+HL NMM M
Sbjct: 73 IVVHMIYFLHMTTAAEEGWTMMALIFTIVMVVIALAGSLWVMHHLTTNMMPAHDM 127
>gi|239830890|ref|ZP_04679219.1| cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum intermedium
LMG 3301]
gi|239823157|gb|EEQ94725.1| cytochrome o ubiquinol oxidase subunit IV [Ochrobactrum intermedium
LMG 3301]
Length = 122
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + ++G+ K L+GF+L+++LT++PF + M G+F ++ A+ Q
Sbjct: 1 MMSSAHETHDHAAHGSLKSYLIGFVLAVVLTVVPFMLAMNGYFTP-ATTAAIVLGLAVVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
I+VHLV+FLH+ K E GW+I+A+IFT+I++AI GS+WVM+HL+ NMM M
Sbjct: 60 ILVHLVYFLHLDPKSEGGWNILALIFTVIILAIVLAGSIWVMHHLDTNMMPMYMSP 115
>gi|256060188|ref|ZP_05450368.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella neotomae
5K33]
gi|261324165|ref|ZP_05963362.1| cytochrome o ubiquinol oxidase subunit IV [Brucella neotomae 5K33]
gi|261300145|gb|EEY03642.1| cytochrome o ubiquinol oxidase subunit IV [Brucella neotomae 5K33]
Length = 121
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ ++G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+VHL++
Sbjct: 7 THDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQILVHLIY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M +
Sbjct: 66 FLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTPN 115
>gi|159184177|ref|NP_353175.2| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium
tumefaciens str. C58]
gi|159139510|gb|AAK85960.2| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium
tumefaciens str. C58]
Length = 130
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 73/101 (72%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72
S+GT K ++GF+LS+ILT IPF +VM G +K ++ + I+ + QI VH+++FLHM
Sbjct: 22 SHGTFKSYMIGFVLSVILTAIPFWLVMGGVLENKTLLVIAIMGLGVIQIFVHMIYFLHMD 81
Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
T+ E GW+ MA+IFT++++ I GS+WVMY++N NMM +
Sbjct: 82 TRSEGGWTFMALIFTVVVLLITLSGSLWVMYNMNKNMMPLH 122
>gi|315122073|ref|YP_004062562.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495475|gb|ADR52074.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 119
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 85/118 (72%), Positives = 101/118 (85%), Gaps = 2/118 (1%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGF-FLDKNIMCLTIVLCAIAQII 62
D HN HS+GT+++ L+GFILSLILT IPFG+VM+G FLDKN+ L IVLCAIAQII
Sbjct: 2 DYNHNKRTHSHGTRRESLIGFILSLILTSIPFGMVMQGSSFLDKNMTYLVIVLCAIAQII 61
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG-MRSIH 119
VHLV+FLHM+ KVEDGW++MAM+FTII++AICFVGSMWVMYHLN NMM M+ MRSIH
Sbjct: 62 VHLVYFLHMNVKVEDGWNVMAMVFTIIIIAICFVGSMWVMYHLNYNMMPMDESMRSIH 119
>gi|254690357|ref|ZP_05153611.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 6
str. 870]
gi|260755901|ref|ZP_05868249.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 6
str. 870]
gi|260676009|gb|EEX62830.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 6
str. 870]
Length = 121
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+
Sbjct: 2 SSAHQTHDHAAHGSVKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 60
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 61 VHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114
>gi|191173515|ref|ZP_03035042.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli F11]
gi|190906224|gb|EDV65836.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli F11]
Length = 124
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 16 MSHSNA--SSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 72
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 73 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 122
>gi|62289032|ref|YP_220825.1| ubiquinol oxidase subunit IV [Brucella abortus bv. 1 str. 9-941]
gi|82698969|ref|YP_413543.1| cytochrome C oxidase subunit IV [Brucella melitensis biovar Abortus
2308]
gi|148560321|ref|YP_001258092.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ovis ATCC
25840]
gi|161618035|ref|YP_001591922.1| cytochrome o ubiquinol oxidase subunit IV [Brucella canis ATCC
23365]
gi|163842321|ref|YP_001626725.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis ATCC
23445]
gi|189023307|ref|YP_001934075.1| cytochrome C oxidase subunit IV [Brucella abortus S19]
gi|254694846|ref|ZP_05156674.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 3
str. Tulya]
gi|254696475|ref|ZP_05158303.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 2
str. 86/8/59]
gi|254705226|ref|ZP_05167054.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 3
str. 686]
gi|254707255|ref|ZP_05169083.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella pinnipedialis
M163/99/10]
gi|254709204|ref|ZP_05171015.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella pinnipedialis
B2/94]
gi|254713371|ref|ZP_05175182.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti
M644/93/1]
gi|254716271|ref|ZP_05178082.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti
M13/05/1]
gi|254718265|ref|ZP_05180076.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella sp. 83/13]
gi|254731387|ref|ZP_05189965.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 4
str. 292]
gi|256030728|ref|ZP_05444342.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella pinnipedialis
M292/94/1]
gi|256158735|ref|ZP_05456610.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti
M490/95/1]
gi|256254132|ref|ZP_05459668.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella ceti B1/94]
gi|256258611|ref|ZP_05464147.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus bv. 9
str. C68]
gi|256368511|ref|YP_003106017.1| cytochrome o ubiquinol oxidase subunit IV [Brucella microti CCM
4915]
gi|260169631|ref|ZP_05756442.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. F5/99]
gi|260546326|ref|ZP_05822066.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus NCTC
8038]
gi|260567307|ref|ZP_05837777.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 4
str. 40]
gi|260759125|ref|ZP_05871473.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 4
str. 292]
gi|260760850|ref|ZP_05873193.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 2
str. 86/8/59]
gi|260884925|ref|ZP_05896539.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 9
str. C68]
gi|261215176|ref|ZP_05929457.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 3
str. Tulya]
gi|261218048|ref|ZP_05932329.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M13/05/1]
gi|261221275|ref|ZP_05935556.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti B1/94]
gi|261314737|ref|ZP_05953934.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis
M163/99/10]
gi|261316705|ref|ZP_05955902.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis
B2/94]
gi|261321102|ref|ZP_05960299.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M644/93/1]
gi|261755935|ref|ZP_05999644.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 3 str.
686]
gi|261759161|ref|ZP_06002870.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella sp. F5/99]
gi|265983226|ref|ZP_06095961.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. 83/13]
gi|265987775|ref|ZP_06100332.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis
M292/94/1]
gi|265997236|ref|ZP_06109793.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M490/95/1]
gi|297247450|ref|ZP_06931168.1| cytochrome o ubiquinol oxidase operon protein cyoD [Brucella
abortus bv. 5 str. B3196]
gi|306840008|ref|ZP_07472802.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. NF 2653]
gi|306842662|ref|ZP_07475307.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO2]
gi|306843645|ref|ZP_07476246.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO1]
gi|62195164|gb|AAX73464.1| QoxD, ubiquinol oxidase subunit IV [Brucella abortus bv. 1 str.
9-941]
gi|82615070|emb|CAJ09998.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis
biovar Abortus 2308]
gi|148371578|gb|ABQ61557.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ovis ATCC
25840]
gi|161334846|gb|ABX61151.1| cytochrome o ubiquinol oxidase subunit IV [Brucella canis ATCC
23365]
gi|163673044|gb|ABY37155.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis ATCC
23445]
gi|189018879|gb|ACD71601.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus S19]
gi|255998669|gb|ACU47068.1| cytochrome o ubiquinol oxidase subunit IV [Brucella microti CCM
4915]
gi|260096433|gb|EEW80309.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella abortus NCTC
8038]
gi|260156825|gb|EEW91905.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 4
str. 40]
gi|260669443|gb|EEX56383.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 4
str. 292]
gi|260671282|gb|EEX58103.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 2
str. 86/8/59]
gi|260874453|gb|EEX81522.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 9
str. C68]
gi|260916783|gb|EEX83644.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus bv. 3
str. Tulya]
gi|260919859|gb|EEX86512.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti B1/94]
gi|260923137|gb|EEX89705.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M13/05/1]
gi|261293792|gb|EEX97288.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M644/93/1]
gi|261295928|gb|EEX99424.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis
B2/94]
gi|261303763|gb|EEY07260.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis
M163/99/10]
gi|261739145|gb|EEY27141.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella sp. F5/99]
gi|261745688|gb|EEY33614.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 3 str.
686]
gi|262551704|gb|EEZ07694.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti M490/95/1]
gi|264659972|gb|EEZ30233.1| cytochrome o ubiquinol oxidase subunit IV [Brucella pinnipedialis
M292/94/1]
gi|264661818|gb|EEZ32079.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. 83/13]
gi|297174619|gb|EFH33966.1| cytochrome o ubiquinol oxidase operon protein cyoD [Brucella
abortus bv. 5 str. B3196]
gi|306276336|gb|EFM58036.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO1]
gi|306287197|gb|EFM58694.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. BO2]
gi|306404972|gb|EFM61257.1| cytochrome o ubiquinol oxidase subunit IV [Brucella sp. NF 2653]
Length = 121
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+
Sbjct: 2 SSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 60
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 61 VHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114
>gi|190895344|ref|YP_001985636.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli
CIAT 652]
gi|218514327|ref|ZP_03511167.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli
8C-3]
gi|190699289|gb|ACE93373.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli
CIAT 652]
gi|327188656|gb|EGE55862.1| cytochrome O ubiquinol oxidase protein, subunit IV [Rhizobium etli
CNPAF512]
Length = 133
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT + + GF LS++LT IPF +VM G F + + ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFALSIVLTAIPFWLVMSGVFESPAVTAVLVMAIGAIQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH+VFFLHM+ + E GW++MA+IFTII+VAI GS+WVM+HLN NMM M E M+++
Sbjct: 75 VHMVFFLHMNPRSEGGWTMMALIFTIIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|304395491|ref|ZP_07377374.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. aB]
gi|308185899|ref|YP_003930030.1| Cytochrome o ubiquinol oxidase protein cyoD [Pantoea vagans C9-1]
gi|304356785|gb|EFM21149.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. aB]
gi|308056409|gb|ADO08581.1| Cytochrome o ubiquinol oxidase protein cyoD [Pantoea vagans C9-1]
Length = 109
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ N + S+G+ K ++GFILS+ILT IPF +VM G + +++CA+ Q++V
Sbjct: 2 SHSVNEHGASHGSVKSYMIGFILSIILTAIPFWMVMDGSA-SHGTILGVVLVCAVIQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLH+ +K E GW+++A++F+ I++ I VGS+W+M++LN NMM
Sbjct: 61 HLVYFLHLDSKSEGGWNMVAIVFSAIIILIVVVGSLWIMWNLNYNMMP 108
>gi|197284017|ref|YP_002149889.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis HI4320]
gi|227358113|ref|ZP_03842454.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis ATCC
29906]
gi|194681504|emb|CAR40376.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis HI4320]
gi|227161449|gb|EEI46486.1| cytochrome O ubiquinol oxidase protein [Proteus mirabilis ATCC
29906]
Length = 110
Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N + + S+G+ K L+GFILS+ILT+IPF +VM+G I+ T+V A+ Q
Sbjct: 1 MSHPNT-SPSGASHGSMKSYLIGFILSVILTVIPFWMVMEGTATTSTIL-WTVVGMAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+T E+ W+++A +FT++++ I +GS+W+MY+LN NMM
Sbjct: 59 IVVHLVCFLHMNTSSEERWNVIAFLFTLLIIGIVVIGSLWIMYNLNINMM 108
>gi|225626592|ref|ZP_03784631.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti str. Cudo]
gi|237814519|ref|ZP_04593517.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus str.
2308 A]
gi|225618249|gb|EEH15292.1| cytochrome o ubiquinol oxidase subunit IV [Brucella ceti str. Cudo]
gi|237789356|gb|EEP63566.1| cytochrome o ubiquinol oxidase subunit IV [Brucella abortus str.
2308 A]
Length = 122
Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + ++G+ K L+GF+L++ILT++PF + M G+F + ++ A Q
Sbjct: 1 MMSSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
I+VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 60 ILVHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 115
>gi|262372200|ref|ZP_06065479.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter junii
SH205]
gi|262312225|gb|EEY93310.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter junii
SH205]
Length = 124
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ HN S+G KQ VGFILS++LTIIPFG+VM G F + I+ I + A+AQ++V
Sbjct: 19 HDHNAAGASHGNFKQYTVGFILSVVLTIIPFGMVMAGGF-SRGILMTVIAITAVAQVLVQ 77
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LV+FLHM+T E W+++A I+TI+ +A+ VGS+W+M +L+ NMM
Sbjct: 78 LVYFLHMNTSSEQRWNLIAFIYTILCIAVLLVGSVWIMNYLHYNMM 123
>gi|253990904|ref|YP_003042260.1| cytochrome o ubiquinol oxidase subunit IV [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782354|emb|CAQ85518.1| cyoD; Cytochrome O ubiquinol oxidase protein cyoD (Ubiquinol
oxidase chain D) [Photorhabdus asymbiotica]
Length = 110
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N S+G+ K ++GF+LS+ILT+IPF +VM G + T+V A+ Q
Sbjct: 1 MSHSNT-AHTGASHGSLKSYVIGFVLSVILTVIPFWMVMDGSA-SHTTILTTVVALAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VH ++FLHM+T E+ W+++A++FTI+++ I VGS+W+MY+LN NMM
Sbjct: 59 ILVHFIYFLHMNTSSEERWNLVALLFTILIIGIVVVGSLWIMYNLNINMM 108
>gi|116255239|ref|YP_771072.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium
leguminosarum bv. viciae 3841]
gi|115259887|emb|CAK02981.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium
leguminosarum bv. viciae 3841]
Length = 133
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT + + GF+LS+ILT IPF +VM G F + + ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFVLSVILTAIPFWLVMSGVFASPVLTAVLVMGLGAIQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH+VFFLHM+T+ E GW+IMA+IFT+I+VAI GS+WVM+HLN NMM M E M+++
Sbjct: 75 VHMVFFLHMNTRSEGGWTIMALIFTLIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|262369760|ref|ZP_06063088.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter johnsonii
SH046]
gi|262315828|gb|EEY96867.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter johnsonii
SH046]
Length = 123
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +D HN S+G KQ +GFILS+ILT+IPFG+VM G F + I+ I + A+AQ
Sbjct: 16 MSHD--HNSAGASHGNTKQYTIGFILSVILTVIPFGMVMAGGF-GRGIVMAVIAITAVAQ 72
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++V LV+FLHM++ E W+++A I+T++ +A+ VGS+W+M +L+ NMM
Sbjct: 73 VLVQLVYFLHMNSSSEQRWNVIAFIYTVLCIAVLLVGSVWIMNYLHYNMM 122
>gi|290510102|ref|ZP_06549472.1| cytochrome o ubiquinol oxidase operon protein cyoD [Klebsiella sp.
1_1_55]
gi|289776818|gb|EFD84816.1| cytochrome o ubiquinol oxidase operon protein cyoD [Klebsiella sp.
1_1_55]
Length = 136
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + +G+ K + GFILS+ILT+IPF +VM G ++ TI++ A+ Q
Sbjct: 28 MSHSTDH--SGAPHGSVKSYMTGFILSIILTVIPFAMVMSGSA-SHAVILGTILVTAVVQ 84
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLHM++K ++GW++ A IFT+I++AI VGS+W+M++LN NMM
Sbjct: 85 IVVHLVYFLHMNSKSDEGWNLTAFIFTVIIIAIVVVGSIWIMWNLNYNMM 134
>gi|225851588|ref|YP_002731821.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis ATCC
23457]
gi|256045835|ref|ZP_05448711.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv.
1 str. Rev.1]
gi|256112552|ref|ZP_05453473.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv.
3 str. Ether]
gi|256264901|ref|ZP_05467433.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis
bv. 2 str. 63/9]
gi|260563126|ref|ZP_05833612.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis
bv. 1 str. 16M]
gi|265992249|ref|ZP_06104806.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv.
1 str. Rev.1]
gi|265993992|ref|ZP_06106549.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv.
3 str. Ether]
gi|225639953|gb|ACN99866.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis ATCC
23457]
gi|260153142|gb|EEW88234.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis
bv. 1 str. 16M]
gi|262764973|gb|EEZ10894.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv.
3 str. Ether]
gi|263003315|gb|EEZ15608.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis bv.
1 str. Rev.1]
gi|263095386|gb|EEZ18987.1| prokaryotic Cytochrome C oxidase subunit IV [Brucella melitensis
bv. 2 str. 63/9]
gi|326408057|gb|ADZ65122.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis M28]
gi|326537773|gb|ADZ85988.1| cytochrome o ubiquinol oxidase subunit IV [Brucella melitensis
M5-90]
Length = 121
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 4 DNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ H + H+ +G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+
Sbjct: 2 SSAHQTHDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQIL 60
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
VHL++FL++ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 61 VHLIYFLYLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114
>gi|37527738|ref|NP_931083.1| cytochrome o ubiquinol oxidase subunit IV [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36787174|emb|CAE16250.1| cytochrome O ubiquinol oxidase protein cyoD (ubiquinol oxidase
chain D) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 110
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + S+G+ K L+GF+LS+ILT+IPF +VM G + T+V A+ Q
Sbjct: 1 MSHSDT-AHTGASHGSLKSYLIGFVLSVILTVIPFWMVMDGSA-SHTTILTTVVALAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
IIVH ++FLHM+T E+ W+++A++FTI+++ I VGS+W+MY+LN NMM
Sbjct: 59 IIVHFIYFLHMNTSSEERWNLVALLFTILIIGIVVVGSLWIMYNLNINMM 108
>gi|195970075|ref|YP_002122335.1| cytochrome o ubiquinol oxidase protein CyoD [Sinorhizobium meliloti
1021]
gi|307320582|ref|ZP_07599996.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti
AK83]
gi|186929524|emb|CAQ51297.1| Cytochrome o ubiquinol oxidase protein cyoD [Sinorhizobium meliloti
1021]
gi|306893732|gb|EFN24504.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti
AK83]
Length = 133
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H + +GT K GF+LS+ILT IPF +VM + I+ QI+
Sbjct: 16 HGHSHGHDA-GHGTLKSYATGFVLSVILTAIPFWLVMADILDSAVLTAAIIMALGAVQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH++FFLHM+T+ E GW++MA+IFTI++VAI GS+WVM+HLN NMM M E M+++
Sbjct: 75 VHMIFFLHMNTRSEGGWTMMALIFTILLVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|146310557|ref|YP_001175631.1| cytochrome o ubiquinol oxidase subunit IV [Enterobacter sp. 638]
gi|145317433|gb|ABP59580.1| cytochrome bo3 quinol oxidase subunit 4 [Enterobacter sp. 638]
Length = 108
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N H S+G+ K + GFILS+ILT+IPF +VM G K ++ +++ A+ Q
Sbjct: 1 MSHSNDHG---ASHGSVKTYMTGFILSIILTVIPFWMVMNGSA-SKPVLLGVVLVTAVIQ 56
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW+I A IFT+I++AI VGS+W+M++LN NMM
Sbjct: 57 ILVHLVCFLHMNTKSDEGWNITAFIFTVIIIAILVVGSIWIMWNLNYNMM 106
>gi|262279560|ref|ZP_06057345.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
calcoaceticus RUH2202]
gi|262259911|gb|EEY78644.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
calcoaceticus RUH2202]
Length = 124
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ HN S+G KQ VGFILS+ILTIIPFG+VM G F + I+ I + A+AQ++V
Sbjct: 18 SHDHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGILVTVIAITAVAQVLV 76
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM
Sbjct: 77 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 123
>gi|227820112|ref|YP_002824083.1| cytochrome O ubiquinol oxidase subunit IV [Sinorhizobium fredii
NGR234]
gi|227339111|gb|ACP23330.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium fredii
NGR234]
Length = 133
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT K L GF+LS+ILT IPF +VM + + I+ QI+
Sbjct: 16 HGHSHGHEA-GHGTLKSYLTGFVLSVILTAIPFWLVMAEVLDSPVLTAVIIMALGAIQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH++FFLHM+T+ E GW++MA+IFTI++V I GS+WVM+HL NMM M + M+++
Sbjct: 75 VHMIFFLHMNTRSEGGWTMMALIFTIVLVVIALSGSLWVMHHLEENMMPMSPQMMKNM 132
>gi|169633240|ref|YP_001706976.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
SDF]
gi|169795506|ref|YP_001713299.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AYE]
gi|260549406|ref|ZP_05823625.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp.
RUH2624]
gi|260554568|ref|ZP_05826789.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
ATCC 19606]
gi|169148433|emb|CAM86299.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AYE]
gi|169152032|emb|CAP00912.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii]
gi|260407515|gb|EEX00989.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp.
RUH2624]
gi|260411110|gb|EEX04407.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
ATCC 19606]
Length = 124
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ HN S+G KQ VGFILS+ILTIIPFG+VM G F + ++ I + A+AQ++V
Sbjct: 18 SHEHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGLLVTVIAITAVAQVLV 76
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM
Sbjct: 77 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 123
>gi|315500561|ref|YP_004089363.1| cytochrome o ubiquinol oxidase subunit IV [Asticcacaulis
excentricus CB 48]
gi|315418573|gb|ADU15212.1| cytochrome o ubiquinol oxidase subunit IV [Asticcacaulis
excentricus CB 48]
Length = 147
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 1 MKYDNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
+++ H + + + K L+GF LS+ILT IPF + M L + I++ +
Sbjct: 28 LQHGQGHGRDHGAGHASVKDYLIGFSLSVILTAIPFALTMLK-LLPAATLVPVILILGVI 86
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
QI+VHL +FLHM++ W+ +A IFT I+V I VGS+WVM HLN+NM
Sbjct: 87 QIVVHLRYFLHMNSSSSQVWNNLAFIFTAIIVGILIVGSLWVMTHLNHNMAP 138
>gi|261346373|ref|ZP_05974017.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rustigianii
DSM 4541]
gi|282565690|gb|EFB71225.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rustigianii
DSM 4541]
Length = 110
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M ++ S+G+ K L+GFILS+ILT+IPF +VM G + ++ T+V A+ Q
Sbjct: 1 MSHERD-AHTGASHGSVKTYLIGFILSVILTVIPFWMVMNGTA-SQGVILATVVGMAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+T ++ W+++A +FT+++V I +GS+W+MY+LN NMM
Sbjct: 59 ILVHLVCFLHMNTSSDERWNLVAFLFTMLIVGIVVIGSLWIMYNLNINMM 108
>gi|326317721|ref|YP_004235393.1| cytochrome o ubiquinol oxidase subunit IV [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374557|gb|ADX46826.1| cytochrome o ubiquinol oxidase subunit IV [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 144
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 70/104 (67%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ T +VGF+LS+ILT IPF +VM D++ L + A+ QI+VH+V FLHM+
Sbjct: 28 HSTFSGYMVGFVLSIILTAIPFWLVMAKVISDRSTAVLVLGAFAVVQILVHMVCFLHMNG 87
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
KVE GW++++ IFT++ VAI G++WVM+H+N NMM M +
Sbjct: 88 KVEGGWTMLSTIFTVVFVAIAIAGTLWVMFHMNTNMMPEHNMPA 131
>gi|86747365|ref|YP_483861.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris HaA2]
gi|86570393|gb|ABD04950.1| cytochrome C oxidase subunit IV [Rhodopseudomonas palustris HaA2]
Length = 130
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 2 KYDNIHNMNMH----SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57
+ + H H ++GT K L+GF LS++LT IPF +VM +K L I+ A
Sbjct: 10 AHGHDHGHEAHVAAQTHGTLKSYLIGFGLSVVLTAIPFWLVMGDVLGNKQATGLVIMAFA 69
Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
QI+VH+++FLHM+T E+GW++MA+IFTI+MV I GS+WVM+HL NMM M
Sbjct: 70 AVQIVVHMIYFLHMTTAAEEGWTMMALIFTIVMVVIALAGSLWVMHHLTTNMMPAHDM 127
>gi|114767474|ref|ZP_01446257.1| cytochrome o ubiquinol oxidase subunit IV [Pelagibaca bermudensis
HTCC2601]
gi|114540454|gb|EAU43536.1| cytochrome o ubiquinol oxidase subunit IV [Roseovarius sp.
HTCC2601]
Length = 127
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 68/108 (62%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ H +GT Q ++GF L+ ILTIIPF +VM + ++ + I+ QI+VHLV+
Sbjct: 5 THHAHDHGTMGQLMIGFALAAILTIIPFYLVMAEVDMARSTLVGIIMGLGAVQIVVHLVY 64
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
FLH+ E+GW+ A IF +I++ I GS+WVM+++N NMM M M
Sbjct: 65 FLHLKRSSEEGWNFFATIFAVIILVIVLAGSLWVMHNMNENMMPMHEM 112
>gi|194292955|ref|YP_002008862.1| transmembrane cytochrome o ubiquinol oxidase subunit iv
[Cupriavidus taiwanensis LMG 19424]
gi|193226859|emb|CAQ72810.1| TRANSMEMBRANE CYTOCHROME O UBIQUINOL OXIDASE (SUBUNIT IV)
OXIDOREDUCTASE PROTEIN [Cupriavidus taiwanensis LMG
19424]
Length = 135
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+D+ H + + + + GF+LS+ILT IPF +VM F + + ++ QI+
Sbjct: 19 HDHGHGES-EIHISLGGYVTGFVLSVILTAIPFWLVMGRVFEQSSTTAMVLLALGAVQIV 77
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
VH+++FLH++ + E GW+++A+IFT+++V I G++WVM+HLN+NMM
Sbjct: 78 VHMIYFLHLNARSEGGWNMLALIFTLVLVVITLTGTLWVMFHLNSNMMP 126
>gi|237808828|ref|YP_002893268.1| cytochrome o ubiquinol oxidase subunit IV [Tolumonas auensis DSM
9187]
gi|237501089|gb|ACQ93682.1| cytochrome o ubiquinol oxidase subunit IV [Tolumonas auensis DSM
9187]
Length = 109
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M ++ H S+G+ K + GFILS++LT+IPF IVM+ ++ I A+AQ
Sbjct: 1 MSHNTSHG--GASHGSVKSYITGFILSVVLTVIPFWIVMESALPPSTVIL-VIAAFAVAQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V L++FLHM TK E GW+++A +FT++++AI VGS+W+M+HLN+NMM
Sbjct: 58 ILVQLIYFLHMDTKSEGGWNMIAFVFTVLIIAIIVVGSLWIMFHLNHNMM 107
>gi|23500960|ref|NP_697087.1| ubiquinol oxidase subunit IV [Brucella suis 1330]
gi|23346817|gb|AAN29002.1| ubiquinol oxidase subunit IV [Brucella suis 1330]
Length = 121
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ ++G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+VHL++
Sbjct: 7 THDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQILVHLIY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 66 FLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMPMYMTP 114
>gi|307309510|ref|ZP_07589166.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti
BL225C]
gi|306900095|gb|EFN30715.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium meliloti
BL225C]
Length = 133
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H + +GT K + GF+LS+ILT IPF +VM + I+ QI+
Sbjct: 16 HGHSHGHDA-GHGTLKSYMTGFVLSVILTAIPFWLVMADVLDSAVLTAAIIMALGALQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH++FFLHM+T+ E GW++MA+IFTI++VAI GS+WVM+HLN NMM M E M+++
Sbjct: 75 VHMIFFLHMNTRSEGGWTMMALIFTILLVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|307129919|ref|YP_003881935.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii 3937]
gi|306527448|gb|ADM97378.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii 3937]
Length = 110
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 82/110 (74%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ S+G+ K L+GF+LS+ILT+IPFG+VM G +++ LT++ CA+ Q
Sbjct: 1 MSHS-THDHAGASHGSVKSYLIGFVLSIILTVIPFGLVMNGSA-SHSVILLTVLGCAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++FT +++AI VGS+W+M + ++NMM
Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVAIVFTALIIAIVVVGSLWIMMNAHHNMM 108
>gi|188584037|ref|YP_001927482.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium populi
BJ001]
gi|179347535|gb|ACB82947.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium populi
BJ001]
Length = 131
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K + GF+LS+ILT IPF +VM DK + + I+ A+ QI+VH+++FLHM+TK
Sbjct: 26 SFKDYVTGFVLSVILTAIPFWLVMDNVIEDKIVTGVVILALAVVQIVVHMIYFLHMNTKS 85
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
E GW+ +A+IFTI +V I GS+WVM+HLN NMM + H
Sbjct: 86 EGGWTFLALIFTITLVVITLCGSIWVMHHLNTNMMPISAEEMRH 129
>gi|209546368|ref|YP_002278258.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209539225|gb|ACI59158.1| cytochrome o ubiquinol oxidase subunit IV [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 133
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT + + GF LS++LT IPF +VM G F + L ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFRSYMTGFALSVVLTAIPFWLVMAGVFASPLVTALLVMGIGAIQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH+VFFLHM+ + E GW++MA+IFTII+VAI GS+WVM+HLN+NMM M E M+++
Sbjct: 75 VHMVFFLHMNPRSEGGWTMMALIFTIIIVAIALSGSLWVMHHLNSNMMPMSPEMMKNM 132
>gi|290474675|ref|YP_003467555.1| cytochrome o ubiquinol oxidase subunit IV [Xenorhabdus bovienii
SS-2004]
gi|289173988|emb|CBJ80775.1| cytochrome o ubiquinol oxidase, subunit IV [Xenorhabdus bovienii
SS-2004]
Length = 110
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N + + +G+ K ++GFILS+ILT+IPF +VM G ++ + LT++ A+ Q
Sbjct: 1 MSHPNT-SHSGADHGSFKTYMIGFILSVILTVIPFWMVMDGSA-SQSTILLTVIGMAVIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I VH V FLHM+T E+ W+++A+IFT++++AI VGS+W+MY+LN NMM
Sbjct: 59 IFVHFVCFLHMNTSSEERWNLVALIFTLLVIAIVVVGSLWIMYNLNINMM 108
>gi|120610894|ref|YP_970572.1| cytochrome C oxidase subunit IV [Acidovorax citrulli AAC00-1]
gi|120589358|gb|ABM32798.1| cytochrome bo3 quinol oxidase subunit 4 [Acidovorax citrulli
AAC00-1]
Length = 142
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/104 (46%), Positives = 70/104 (67%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ T +VGF+LS+ILT IPF +VM D+N L + A+ QI+VH+V FLHM+
Sbjct: 26 HSTFSGYMVGFVLSVILTAIPFWLVMAKVISDRNTAVLVLGAFAVVQILVHMVCFLHMNG 85
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
KVE GW++++ IFT++ VAI G++WVM+H+N NMM M +
Sbjct: 86 KVEGGWTMLSTIFTVVFVAIAIAGTLWVMFHMNTNMMPEHTMPA 129
>gi|86360305|ref|YP_472193.1| cytochrome O ubiquinol oxidase, subunit IV protein [Rhizobium etli
CFN 42]
gi|86284407|gb|ABC93466.1| cytochrome O ubiquinol oxidase, subunit IV protein [Rhizobium etli
CFN 42]
Length = 133
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT + + GF LS++LT IPF +VM G F + + ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFRSYMAGFALSVVLTAIPFWLVMAGVFASPAVTAVLVMAIGAVQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
VH+VFFLHM+ + E GW++MA+IFT+I+VAI GS+WVM+HLN NMM M E M+++
Sbjct: 75 VHMVFFLHMNPRSEGGWTMMALIFTLIIVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|163857711|ref|YP_001632009.1| hypothetical protein Bpet3398 [Bordetella petrii DSM 12804]
gi|163261439|emb|CAP43741.1| conserved hypothetical protein [Bordetella petrii]
Length = 125
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
N H + ++ + L+GF L+ ILT IPF IVM F + L ++ AI QI+VH
Sbjct: 9 NGHEEDPLAHASLHGYLLGFALAAILTAIPFFIVMANVFSSSRVTGLVLLALAIVQIVVH 68
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
+++FLH+ + E GW++++++FT+++V I GS+W+MYHL++NMM M MR++
Sbjct: 69 VIYFLHVDFQSEGGWNMLSIVFTLVLVVIALSGSIWIMYHLDHNMMPMSTHDMRNM 124
>gi|94314530|ref|YP_587739.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus
metallidurans CH34]
gi|93358382|gb|ABF12470.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus
metallidurans CH34]
gi|222831883|gb|EEE70360.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 66/98 (67%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ T L GF+LS+ LT +PF +VM F + + I+L QI+VH+++FLHM+
Sbjct: 24 HATLGGYLTGFVLSVFLTAVPFWLVMGKVFEKSSTTAIAILLIGAVQIVVHMIYFLHMNA 83
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
K E GW++++++FT+ +V I GS+WVM+HLN+NMM
Sbjct: 84 KSEGGWNMLSLMFTLTLVVITLTGSLWVMFHLNSNMMP 121
>gi|251790656|ref|YP_003005377.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya zeae Ech1591]
gi|247539277|gb|ACT07898.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya zeae Ech1591]
Length = 110
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 81/110 (73%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ S+G+ K LVGF+LS+ILT+IPFG+VM G N++ L ++ CAI Q
Sbjct: 1 MSHS-THDHAGASHGSVKSYLVGFVLSIILTVIPFGLVMNGSA-SHNVILLAVLGCAIIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++FT +++AI VGS+W+M + ++NMM
Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVAIVFTALIIAIVVVGSLWIMMNAHHNMM 108
>gi|163867422|ref|YP_001608619.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella tribocorum
CIP 105476]
gi|161017066|emb|CAK00624.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella tribocorum
CIP 105476]
Length = 242
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 8 NMNMHSYG-TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVH 64
+M ++ + L+GFIL++ T+ F VM G I + + A+ QIIV
Sbjct: 2 SMQNETHSPSIGSYLIGFILAVFFTLGSFIPVMYGMMESWAISTKVVYLIGMALIQIIVQ 61
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VFFLH+++ + W++ A+ F I V I G+ W + HLN NMM
Sbjct: 62 IVFFLHLNSGPDAKWNLSALWFAAICVFIIVGGTWWAISHLNYNMM 107
>gi|99082127|ref|YP_614281.1| cytochrome C oxidase subunit IV [Ruegeria sp. TM1040]
gi|99038407|gb|ABF65019.1| cytochrome C oxidase subunit IV [Ruegeria sp. TM1040]
Length = 115
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 67/106 (63%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M+ HS+G+ K +GF+LS+ILT+IPF +V+ + N I QIIVH+ +F
Sbjct: 1 MSAHSHGSYKSYAIGFVLSVILTVIPFWLVLGEVDIGVNTAIAVIFGLGAVQIIVHMHYF 60
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114
LH++ EDGW +M+++FT I++ I GS+WVM HL+ NMM
Sbjct: 61 LHVTYGAEDGWQVMSLVFTGILLIIVLAGSIWVMAHLHENMMPAHE 106
>gi|304414866|ref|ZP_07395784.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Regiella
insecticola LSR1]
gi|304283135|gb|EFL91549.1| cytochrome o ubiquinol oxidase subunit IV [Candidatus Regiella
insecticola LSR1]
Length = 108
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ S+G+ K L+GF+LS+ILT+IPF +VM ++ T+V AI QIIVHLV+
Sbjct: 6 DHAGASHGSLKSYLIGFVLSIILTVIPFAMVMSNTA-SHTLILTTVVALAIVQIIVHLVY 64
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM+ E+ W++ A +FTI+++AI VGS+W+MY+LN NMM
Sbjct: 65 FLHMNGSSEERWNLGAFLFTILVIAIIVVGSLWIMYNLNINMMP 108
>gi|255319502|ref|ZP_05360716.1| cytOchrome o ubiquinol oxidase subunit IV [Acinetobacter
radioresistens SK82]
gi|262378474|ref|ZP_06071631.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
radioresistens SH164]
gi|255303442|gb|EET82645.1| cytOchrome o ubiquinol oxidase subunit IV [Acinetobacter
radioresistens SK82]
gi|262299759|gb|EEY87671.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
radioresistens SH164]
Length = 123
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/110 (47%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +D HN ++G KQ +GFILS+ILTIIPFG+VM G F + ++ I + A AQ
Sbjct: 16 MSHD--HNSAGAAHGNFKQYTIGFILSVILTIIPFGMVMSGGFE-RGLLVTVIAITAAAQ 72
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++V LVFFLHM+ E W+++A I+T++ +AI VGS+W+M +L+ NMM
Sbjct: 73 VLVQLVFFLHMNASSEQRWNVIAFIYTVLCIAILLVGSVWIMNYLHFNMM 122
>gi|295096783|emb|CBK85873.1| cytochrome bo3 quinol oxidase subunit 4 [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 108
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N H S+G+ K + GFILS+ILT+IPF +VM G K ++ I++ A+ Q
Sbjct: 1 MSHSNDHG---ASHGSVKTYMTGFILSIILTVIPFWMVMNGSA-SKPVILGAILVTAVIQ 56
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A IFT+I++AI VGS+W+M++LN NMM
Sbjct: 57 ILVHLVCFLHMNTKSDEGWNMTAFIFTVIIIAILVVGSIWIMWNLNYNMM 106
>gi|156935022|ref|YP_001438938.1| hypothetical protein ESA_02873 [Cronobacter sakazakii ATCC BAA-894]
gi|156533276|gb|ABU78102.1| hypothetical protein ESA_02873 [Cronobacter sakazakii ATCC BAA-894]
Length = 109
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + HN +G K L+GFILS+ILT+IPF +VM G + +V A+ Q
Sbjct: 1 MSHSTDHN--GAHHGGVKTYLIGFILSVILTVIPFWMVMNGSA-SHGTLLGVVVATAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+ E+ W+++A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 ILVHLVCFLHMNASSEERWNLVAFVFTLLIIAIVVVGSIWIMWNLNYNMM 107
>gi|325161734|gb|ADY89613.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas fluorescens]
Length = 111
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ + S+G+ K +GFILS+ILT+IPFG+VM K++ ++ A+ Q
Sbjct: 1 MANAHSHDSHDASHGSVKSYAIGFILSVILTVIPFGLVMYPSL-PKSLTLWIVLAFAVIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++VHLV+FLH+ +++A +F I++ + S+W+M+ ++ NMM+
Sbjct: 60 VLVHLVYFLHLDRSAAQRNNVIAFVFAAIVIVLLVGLSLWIMFSIHTNMMA 110
>gi|260596797|ref|YP_003209368.1| cytochrome o ubiquinol oxidase protein cyoD [Cronobacter turicensis
z3032]
gi|260215974|emb|CBA28615.1| Cytochrome o ubiquinol oxidase protein cyoD [Cronobacter turicensis
z3032]
Length = 109
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + HN +G K L+GFILS+ILT+IPF +VM G + +V A+ Q
Sbjct: 1 MSHSTDHN--GAHHGGVKTYLIGFILSVILTVIPFWMVMNGSA-SHGTLLGVVVATAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+ E+ W+++A IFT++++AI VGS+W+M++LN NMM
Sbjct: 58 ILVHLVCFLHMNASSEERWNLVAFIFTLLIIAIVVVGSIWIMWNLNYNMM 107
>gi|319403608|emb|CBI77193.1| Cytochrome o ubiquinol oxidase protein cyoD (modular protein)
[Bartonella rochalimae ATCC BAA-1498]
Length = 167
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73
+ LVGFIL+++ T+ F VM G I I + A+ QIIV +VFFLH+++
Sbjct: 11 SIGSYLVGFILAVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIVQIVFFLHLNS 70
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W++ A++FT + V I G+ W + HLN NMM
Sbjct: 71 GPDARWNLTALLFTAMCVFIIIGGTWWAISHLNYNMM 107
>gi|94314709|ref|YP_587918.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus
metallidurans CH34]
gi|93358561|gb|ABF12649.1| cytochrome o ubiquinol oxidase subunit IV [Cupriavidus
metallidurans CH34]
Length = 121
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ S+G+ + L+G+ LS++LT++ FG VM G + + ++LC IAQ++V LVF
Sbjct: 7 TAHESSHGSIRSHLIGYGLSVVLTLVSFGAVMSGVLPPGYGLAVIVLLC-IAQLLVQLVF 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
FLH+ + + T+ ++AI GS+WVM++ N NMM M+ M
Sbjct: 66 FLHLGPRKGQRGNTAIFACTVFLIAIVVSGSLWVMHNANLNMMPMQSMP 114
>gi|271499589|ref|YP_003332614.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech586]
gi|270343144|gb|ACZ75909.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech586]
Length = 110
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ S+G+ K L+GF+LS+ILT+IPFG+VM I+ T++ CA+ Q
Sbjct: 1 MSHS-THDHAGASHGSVKSYLIGFVLSIILTVIPFGLVMNSSASHSAILL-TVLGCAVIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++FT +++AI VGS+W+M + ++NMM
Sbjct: 59 ILVHLVYFLHLNTSSEERWNLVAIVFTALIIAIVVVGSIWIMMNAHHNMM 108
>gi|261341030|ref|ZP_05968888.1| cytochrome o ubiquinol oxidase, subunit IV [Enterobacter
cancerogenus ATCC 35316]
gi|296101550|ref|YP_003611696.1| cytochrome o ubiquinol oxidase operon protein cyoD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|288316895|gb|EFC55833.1| cytochrome o ubiquinol oxidase, subunit IV [Enterobacter
cancerogenus ATCC 35316]
gi|295056009|gb|ADF60747.1| cytochrome o ubiquinol oxidase operon protein cyoD [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 108
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/110 (49%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N H S+G+ K + GFILS+ILT+IPF +VM G K ++ I++ A+ Q
Sbjct: 1 MSHSNDHG---ASHGSVKTYMTGFILSIILTVIPFWMVMSGSA-SKPVILGAILVTAVIQ 56
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A IFT+I++AI VGS+W+M++LN NMM
Sbjct: 57 ILVHLVCFLHMNTKSDEGWNMTAFIFTVIIIAILVVGSIWIMWNLNYNMM 106
>gi|268592045|ref|ZP_06126266.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rettgeri
DSM 1131]
gi|291312438|gb|EFE52891.1| cytochrome o ubiquinol oxidase, subunit IV [Providencia rettgeri
DSM 1131]
Length = 110
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + S+G+ K L+GFILS+ILT+IPF +VM+G + + T+V A+ Q
Sbjct: 1 MSHAKD-AHTGASHGSVKTYLIGFILSVILTVIPFWMVMEGTA-STSAILWTVVGMAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+T ++ W+++A +FT+++V I +GS+W+MY+LN NMM
Sbjct: 59 ILVHLVCFLHMNTSSDERWNLVAFLFTMLIVGIVVIGSLWIMYNLNINMM 108
>gi|212709187|ref|ZP_03317315.1| hypothetical protein PROVALCAL_00220 [Providencia alcalifaciens DSM
30120]
gi|212688099|gb|EEB47627.1| hypothetical protein PROVALCAL_00220 [Providencia alcalifaciens DSM
30120]
Length = 110
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + S+G+ K L+GFILS+ILT+IPF +VM G + ++ T+V A+ Q
Sbjct: 1 MSHAKD-AHTGASHGSVKTYLIGFILSVILTVIPFWMVMNGTA-SQGVILATVVGMAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+T ++ W+++A +FT++++ I +GS+W+MY+LN NMM
Sbjct: 59 ILVHLVCFLHMNTSSDERWNLIAFLFTMLIIGIVVIGSLWIMYNLNINMM 108
>gi|183601051|ref|ZP_02962544.1| hypothetical protein PROSTU_04673 [Providencia stuartii ATCC 25827]
gi|188019390|gb|EDU57430.1| hypothetical protein PROSTU_04673 [Providencia stuartii ATCC 25827]
Length = 110
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
S+G+ K ++GF+LS+ILT+IPF +VM+G + + T+V A+ QI+VHLV
Sbjct: 7 AHTGASHGSMKTYVIGFVLSVILTVIPFWMVMEGTA-SQATILWTVVGMAVVQILVHLVC 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
FLHM+T ++ W+++A +FT++++ I +GS+W+MY+LN NMM
Sbjct: 66 FLHMNTSSDERWNLIAFLFTMLIIGIVVIGSLWIMYNLNINMM 108
>gi|194289183|ref|YP_002005090.1| cytochrome o ubiquinol oxidase subunit iv [Cupriavidus taiwanensis
LMG 19424]
gi|193223018|emb|CAQ69023.1| cytochrome o ubiquinol oxidase, subunit IV [Cupriavidus taiwanensis
LMG 19424]
Length = 122
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ H+ + + + K +GFIL++ILT+IPF IVM G DK + TI+ A+ Q+IV
Sbjct: 15 SHAHDSHAGGHASFKGYAIGFILAVILTVIPFKIVMDGTM-DKGTILWTILGMAVVQMIV 73
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
HL +FLH+ + E +++A++FT +++ I GS+W+M++LN NMM M
Sbjct: 74 HLKYFLHLDSSSEQRSNVIALLFTALILVIVVAGSLWIMHNLNANMMVM 122
>gi|103486990|ref|YP_616551.1| cytochrome C oxidase subunit IV [Sphingopyxis alaskensis RB2256]
gi|98977067|gb|ABF53218.1| cytochrome C oxidase subunit IV [Sphingopyxis alaskensis RB2256]
Length = 128
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H + T + ++GF+LS+ILT IPF +VM I+ A+ QI+VH
Sbjct: 9 HGHGEIEMPHATMRDYVIGFVLSVILTAIPFWLVMTMPL-SAGTTGAIIMAFAVVQIVVH 67
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
+VFFLHM+ K E GWS+ +++FT+I+V I GS+WVM+HLN NMM M +
Sbjct: 68 MVFFLHMTPKAEGGWSLTSLVFTVIVVVIMLAGSLWVMHHLNTNMMPMPHEPT 120
>gi|317492923|ref|ZP_07951347.1| cytochrome o ubiquinol oxidase subunit IV protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919045|gb|EFV40380.1| cytochrome o ubiquinol oxidase subunit IV protein
[Enterobacteriaceae bacterium 9_2_54FAA]
Length = 116
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 78/115 (67%), Gaps = 6/115 (5%)
Query: 1 MKYDNIHNMN-----MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVL 55
M + + S+G+ K ++GFILS+ILT+IPF +VM+G + I+ T+V
Sbjct: 1 MSHSPTTGHHSTDNNGASHGSAKSYMIGFILSVILTVIPFWMVMEGTASHQTILI-TVVA 59
Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
A+ QI VHLV+FLHM+T E+ W+++A+ FT +++AI VGS+W+MY+LN NMM
Sbjct: 60 MAVIQIFVHLVYFLHMNTSSEERWNLIALAFTALIIAIVVVGSLWIMYNLNINMM 114
>gi|293607337|ref|ZP_06689676.1| quinol oxidase subunit IV [Achromobacter piechaudii ATCC 43553]
gi|292814181|gb|EFF73323.1| quinol oxidase subunit IV [Achromobacter piechaudii ATCC 43553]
Length = 139
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K + GFIL+ ILT IPF +VM F L I+ A+ QI+VH+++FLHM TK
Sbjct: 34 TLKSYVTGFILAAILTAIPFWLVMDRVFASSRTTALVILAFAVVQIVVHIIYFLHMDTKS 93
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
E GW+++A+IFT+++V I GS+W+MYHLN+NMM M MR++
Sbjct: 94 ESGWNMLALIFTLVLVVITLSGSIWIMYHLNSNMMPMSTHDMRNM 138
>gi|226952679|ref|ZP_03823143.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ATCC
27244]
gi|294649993|ref|ZP_06727381.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
haemolyticus ATCC 19194]
gi|226836585|gb|EEH68968.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ATCC
27244]
gi|292824086|gb|EFF82901.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
haemolyticus ATCC 19194]
Length = 109
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ HN S+G KQ VGFILS+ILTIIPFG+VM G F + I+ I + A+AQ++V
Sbjct: 3 SHDHNAAGASHGNVKQYTVGFILSVILTIIPFGMVMAGGF-SRGILVTVIAITAVAQVLV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LV+FLHM+T + W+++A I+TI+ +A+ VGS+W+M +L+ NMM
Sbjct: 62 QLVYFLHMNTSSDQRWNLIAFIYTILCIAVLLVGSVWIMNYLHYNMM 108
>gi|117617963|ref|YP_857447.1| cytochrome o ubiquinol oxidase subunit IV [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117559370|gb|ABK36318.1| cytochrome O ubiquinol oxidase protein CyoD [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 110
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/107 (46%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
++ + + S+G+ K L+GF+LSLILT +PF +VM G + T+V A+ QI V
Sbjct: 3 NHTVDNHGASHGSAKSYLIGFVLSLILTAVPFWMVMDGSA-SHTTVLATVVGMAVVQIFV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV+FLHM+T E+ W+++A+IFT++++AI VGS+W+MY+LN NMM
Sbjct: 62 HLVYFLHMNTSSEERWNLVALIFTVLIIAIVVVGSLWIMYNLNINMM 108
>gi|332160740|ref|YP_004297317.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604619|emb|CBY26117.1| cytochrome O ubiquinol oxidase subunit IV [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325664970|gb|ADZ41614.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859963|emb|CBX70292.1| cytochrome o ubiquinol oxidase protein cyoD [Yersinia
enterocolitica W22703]
Length = 115
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
S+G+ K ++GFILS+ILT+IPF +VM G + T+V A+ QIIVHLV+
Sbjct: 12 THGGASHGSLKSYIIGFILSVILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVY 70
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
FLHM+ E+ W+++A +FT +++AI VGS+W+MY+LN NMM
Sbjct: 71 FLHMNGSSEERWNLVAFLFTAMIIAIVVVGSLWIMYNLNINMM 113
>gi|254700860|ref|ZP_05162688.1| Prokaryotic Cytochrome C oxidase subunit IV [Brucella suis bv. 5
str. 513]
gi|261751370|ref|ZP_05995079.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 5 str.
513]
gi|261741123|gb|EEY29049.1| cytochrome o ubiquinol oxidase subunit IV [Brucella suis bv. 5 str.
513]
Length = 121
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ ++G+ K L+GF+L++ILT++PF + M G+F + ++ A QI+VHL++
Sbjct: 7 THDHAAHGSLKSYLIGFVLAVILTVVPFALAMGGYFTP-ATTAVIVLAIAAVQILVHLIY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM M
Sbjct: 66 FLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMMLMYMTP 114
>gi|241663143|ref|YP_002981503.1| cytochrome O ubiquinol oxidase subunit IV [Ralstonia pickettii 12D]
gi|309781939|ref|ZP_07676670.1| ubiquinol oxidase subunit IV [Ralstonia sp. 5_7_47FAA]
gi|240865170|gb|ACS62831.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12D]
gi|308919283|gb|EFP64949.1| ubiquinol oxidase subunit IV [Ralstonia sp. 5_7_47FAA]
Length = 141
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/98 (46%), Positives = 67/98 (68%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ T L GF+LS+ LT IPF +VM F + +TI+L QI+VH++FFLHM+
Sbjct: 27 HATLGGYLTGFVLSVFLTAIPFWLVMANVFDRSSTTAVTILLIGAVQIVVHMIFFLHMNA 86
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
K E GW++++++FT+++V I GS+WVMYHLN NMM
Sbjct: 87 KSEGGWNMLSLMFTLVLVVITLSGSLWVMYHLNTNMMP 124
>gi|45440613|ref|NP_992152.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar
Microtus str. 91001]
gi|51595299|ref|YP_069490.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis IP 32953]
gi|108808652|ref|YP_652568.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Antiqua]
gi|108811089|ref|YP_646856.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis
Nepal516]
gi|145600061|ref|YP_001164137.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis
Pestoides F]
gi|149364987|ref|ZP_01887022.1| cytochrome O ubiquinol oxidase subunit [Yersinia pestis CA88-4125]
gi|153949808|ref|YP_001402061.1| cytochrome O ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis IP 31758]
gi|162420623|ref|YP_001607429.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis Angola]
gi|165935892|ref|ZP_02224462.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011041|ref|ZP_02231939.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166212919|ref|ZP_02238954.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167423433|ref|ZP_02315186.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469782|ref|ZP_02334486.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis FV-1]
gi|170025461|ref|YP_001721966.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis YPIII]
gi|186894316|ref|YP_001871428.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis PB1/+]
gi|218930197|ref|YP_002348072.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis CO92]
gi|229838772|ref|ZP_04458931.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229896074|ref|ZP_04511244.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis
Pestoides A]
gi|229899340|ref|ZP_04514483.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901316|ref|ZP_04516438.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis
Nepal516]
gi|294504897|ref|YP_003568959.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
Z176003]
gi|45435470|gb|AAS61029.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis biovar
Microtus str. 91001]
gi|51588581|emb|CAH20189.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis IP 32953]
gi|108774737|gb|ABG17256.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
Nepal516]
gi|108780565|gb|ABG14623.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
Antiqua]
gi|115348808|emb|CAL21762.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis CO92]
gi|145211757|gb|ABP41164.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
Pestoides F]
gi|149291400|gb|EDM41474.1| cytochrome O ubiquinol oxidase subunit [Yersinia pestis CA88-4125]
gi|152961303|gb|ABS48764.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia
pseudotuberculosis IP 31758]
gi|162353438|gb|ABX87386.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis Angola]
gi|165916037|gb|EDR34644.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Orientalis str. IP275]
gi|165990041|gb|EDR42342.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205706|gb|EDR50186.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167057603|gb|EDR67349.1| cytochrome o ubiquinol oxidase, subunit IV [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751995|gb|ACA69513.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis YPIII]
gi|186697342|gb|ACC87971.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia
pseudotuberculosis PB1/+]
gi|229681245|gb|EEO77339.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis
Nepal516]
gi|229687742|gb|EEO79815.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695138|gb|EEO85185.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229700997|gb|EEO89026.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis
Pestoides A]
gi|262362963|gb|ACY59684.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
D106004]
gi|262366882|gb|ACY63439.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
D182038]
gi|294355356|gb|ADE65697.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia pestis
Z176003]
gi|320016354|gb|ADV99925.1| cytochrome o ubiquinol oxidase subunit IV [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 110
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + S+G+ K ++GF+LS+ILT+IPF +VM G LT+V A+ Q
Sbjct: 1 MSHSTT-THGGASHGSLKSYIIGFVLSVILTVIPFVMVMSGTA-SYTTTLLTVVGLAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLHM+T E+ W+++A++FT +++AI VGS+W+MY+LN NMM
Sbjct: 59 IVVHLVYFLHMNTSSEERWNLVALLFTAMIIAIVVVGSLWIMYNLNINMM 108
>gi|330821325|ref|YP_004350187.1| Ubiquinol oxidase, subunit IV [Burkholderia gladioli BSR3]
gi|327373320|gb|AEA64675.1| Ubiquinol oxidase, subunit IV [Burkholderia gladioli BSR3]
Length = 113
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
Query: 1 MKYDNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + H+ + S+GT LVGF+LS+ILT FG+V+ G+F M + + + A
Sbjct: 1 MAHSPAHDGHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFASTTTMVIALAVLAAV 60
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
QI+VHL+FFLHM+T W++ A ++T++ V I VGS+W+M++++ NMMS
Sbjct: 61 QIVVHLIFFLHMNTSSGQRWNLTAFVYTVLTVGIVIVGSLWIMHNVSMNMMS 112
>gi|283784255|ref|YP_003364120.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter rodentium
ICC168]
gi|282947709|emb|CBG87264.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter rodentium
ICC168]
Length = 109
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N H S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 1 MSHSNDHG--GASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-GVILGTILAMAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|238897313|ref|YP_002922990.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229465068|gb|ACQ66842.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 132
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/101 (47%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
G+ K +VGFILS++LT+IPF +VM + ++ T++ A+ QIIVHLV+FL
Sbjct: 31 GGAHQGSLKSYVVGFILSVMLTVIPFMMVMNQSA-SRTVILATVIATAVVQIIVHLVYFL 89
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HM+ E+ W+++A IFT+I++AI VGS+W+M+HLN NMM
Sbjct: 90 HMNGASEERWNLVAFIFTVIIIAIVLVGSLWIMHHLNINMM 130
>gi|113867094|ref|YP_725583.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16]
gi|113525870|emb|CAJ92215.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16]
Length = 122
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 2 KYDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
+D+ + H + + K +GFIL++ILT+IPF +VM G DK + I+ A Q
Sbjct: 12 AHDSHDSHAGHDTHASFKSYAIGFILAVILTVIPFKLVMDGSM-DKGTILWIILGMAAVQ 70
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
I+VHL +FLH+ T E +++A++FT +++ I GS+W+M++LN NMM M
Sbjct: 71 ILVHLKYFLHLDTSSEQRSNVIALLFTALILVIVVAGSLWIMHNLNANMMVM 122
>gi|311280674|ref|YP_003942905.1| cytochrome o ubiquinol oxidase subunit IV [Enterobacter cloacae
SCF1]
gi|308749869|gb|ADO49621.1| cytochrome o ubiquinol oxidase subunit IV [Enterobacter cloacae
SCF1]
Length = 108
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H S+G+ K + GFILS+ILT+IPF +VM G + T+++ A+ Q
Sbjct: 1 MSHSTDHG---ASHGSVKTYMTGFILSIILTLIPFWMVMNGSA-SHVALLGTVLVSAVVQ 56
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A +FT++++AI +GS+W+M++LN NMM
Sbjct: 57 ILVHLVCFLHMNTKSDEGWNLTAFVFTVLIIAIVVIGSIWIMWNLNYNMM 106
>gi|319407993|emb|CBI81647.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella
schoenbuchensis R1]
Length = 190
Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQ 60
+D HN + LVGFIL++ T+ F VM G + I + A+ Q
Sbjct: 2 HDKAHNPSTI------SYLVGFILAVFFTLGSFIPVMYGMLDSWAVSTKVIYLIGMALIQ 55
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V +VFFLH+++ + W+ + + F + V I G+ W + HLN NMM
Sbjct: 56 IVVQIVFFLHLNSGPDAKWNWITLWFAAMCVFIIIGGTWWAISHLNYNMM 105
>gi|319795348|ref|YP_004156988.1| cytochrome o ubiquinol oxidase subunit iv [Variovorax paradoxus
EPS]
gi|315597811|gb|ADU38877.1| cytochrome o ubiquinol oxidase subunit IV [Variovorax paradoxus
EPS]
Length = 136
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72
S+ T K + GF+L++ILT IPF +VM F + N L I+ A QI+VH+++FLHM
Sbjct: 28 SHSTFKGYMTGFVLAVILTAIPFWLVMGKVFANTNTTSLIILGFAAVQIVVHMIYFLHMD 87
Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
K E GW+++A+IFTI++V I GS+WVMYH+N NMM M M+++
Sbjct: 88 AKSESGWNMLALIFTIVLVVITLAGSLWVMYHMNTNMMPMSVHDMKNM 135
>gi|238025053|ref|YP_002909285.1| Ubiquinol oxidase subunit IV [Burkholderia glumae BGR1]
gi|237879718|gb|ACR32050.1| Ubiquinol oxidase, subunit IV [Burkholderia glumae BGR1]
Length = 113
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + H + + S+GT LVGF+LS+ILT FG+V+ G+F + L + + A
Sbjct: 1 MAHSHTHASHDDASHGTVSSYLVGFVLSVILTAASFGVVLGGWFSTNEVKILVLAVLAAV 60
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
QI+VHL+FFLHM+ W++ A +T++ V I VGS+W+M++++ NMMS
Sbjct: 61 QIVVHLIFFLHMNGSSSQRWNVTAFAYTVLTVGIVIVGSLWIMHNVSINMMS 112
>gi|77460866|ref|YP_350373.1| cytochrome C oxidase subunit IV [Pseudomonas fluorescens Pf0-1]
gi|77384869|gb|ABA76382.1| cytochrome bo3 quinol oxidase subunit 4 [Pseudomonas fluorescens
Pf0-1]
Length = 111
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ + +G+ K +GFILS+ILT+IPFG+VM K+ ++L A+ Q
Sbjct: 1 MANAHSHDSHDAGHGSVKSYAIGFILSVILTVIPFGLVMYPTL-PKSTTLAIVLLFAVIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+IVHL +FLH+ + +++A +FT I++ + S+W+M+ ++ MM+
Sbjct: 60 VIVHLYYFLHLDRSIAQRNNVIAFVFTAIVIVLLVGLSLWIMFSIHTYMMA 110
>gi|70732357|ref|YP_262113.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas fluorescens
Pf-5]
gi|68346656|gb|AAY94262.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens
Pf-5]
Length = 109
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
N H+ + +G+ K +GFILS+ILT+IPFG+VM K++ ++ A+ Q++VH
Sbjct: 3 NTHSHDEAGHGSVKSYAIGFILSVILTLIPFGLVMYPSL-PKDVTLWIVLAFAVIQVLVH 61
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
LV+FLH+ +++A IF +++ + S+W+M+ ++ MM+
Sbjct: 62 LVYFLHLDRSEAQRNNVVAFIFAALVIVLLVGLSLWIMFSIHTVMMA 108
>gi|317403926|gb|EFV84395.1| cytochrome ubiquinol oxidase subunit IV [Achromobacter xylosoxidans
C54]
Length = 132
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 50/105 (47%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K + GF+L+ ILT IPF +VM F L I+ A+ QI+VH+++FLHM TK
Sbjct: 27 TLKSYVTGFVLAAILTAIPFWLVMDRVFASSRTTALVILAFAVVQIVVHIIYFLHMDTKS 86
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
E GW+++A+IFT+++V I GS+W+MYHLN+NMM M MR++
Sbjct: 87 ESGWNMLALIFTLVLVVITLSGSIWIMYHLNSNMMPMSVHDMRNM 131
>gi|17546580|ref|NP_519982.1| transmembrane cytochrome O ubiquinol oxidase subunit IV [Ralstonia
solanacearum GMI1000]
gi|17428879|emb|CAD15563.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit iv)
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 125
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
+H +G+ + VG +LS+ LT+ F VM G + + + LC +AQ++V L
Sbjct: 9 VHAGETAPHGSLRGYTVGLLLSVALTLAAFATVMTGALPARLALAGMVGLC-VAQLLVQL 67
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114
V+FLH+ T + + T +++AI GS+WVM++ N NMM +
Sbjct: 68 VYFLHLGTGPGQRGNTAIFVCTGLLIAIVVAGSLWVMHNANENMMPTDM 116
>gi|299769502|ref|YP_003731528.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. DR1]
gi|298699590|gb|ADI90155.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. DR1]
Length = 109
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ HN S+G KQ VGFILS+ILTIIPFG+VM G F + I+ I + A+AQ++V
Sbjct: 3 SHDHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGILVTVIAIAAVAQVLV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM
Sbjct: 62 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 108
>gi|320540328|ref|ZP_08039980.1| cytochrome o ubiquinol oxidase subunit IV [Serratia symbiotica str.
Tucson]
gi|320029648|gb|EFW11675.1| cytochrome o ubiquinol oxidase subunit IV [Serratia symbiotica str.
Tucson]
Length = 112
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + + S+G+ K L+GFILS+ILT+IPF +VM + +V A+
Sbjct: 1 MSHSSHETSHGGASHGSVKSYLIGFILSIILTVIPFAMVMNDSA-SHATILAVVVGTAVI 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VHL++FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM
Sbjct: 60 QVLVHLIYFLHMNTSSEERWNLVALLFTAMVIGIVVVGSLWIMYNLNINMM 110
>gi|330811629|ref|YP_004356091.1| cytochrome o subunit VI [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379737|gb|AEA71087.1| Cytochrome o subunit VI [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 111
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ + +G+ K +GFILS+ILT+IPFG+VM K++ +++ A+ Q
Sbjct: 1 MANAHSHDGHDAGHGSVKSYAIGFILSVILTVIPFGLVMYPSL-PKSLTLWIVLIFAVVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++VHLV+FLH+ +++A +F I++ + S+W+M+ ++ NMM+
Sbjct: 60 VLVHLVYFLHLDRSAAQRNNVVAFVFAAIVIVLLVGLSLWIMFSIHTNMMA 110
>gi|319783410|ref|YP_004142886.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317169298|gb|ADV12836.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 126
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/115 (45%), Positives = 76/115 (66%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
++ H + ++G+ L GF LS++LT +PF +VM ++ + I+ A+ QIIV
Sbjct: 11 NHSHAHHGVNHGSLAGYLTGFGLSVVLTAVPFWLVMTNALGNQMASAIAIMAFAVVQIIV 70
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
H+VFFLHM+T+ E GW++MA+IFT+I+V I GS+WVMYHLN NMM M I
Sbjct: 71 HMVFFLHMNTRSESGWTMMALIFTLILVMIALTGSLWVMYHLNVNMMPGHDMSQI 125
>gi|145299868|ref|YP_001142709.1| cytochrome o ubiquinol oxidase subunit IV [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852640|gb|ABO90961.1| cytochrome O ubiquinol oxidase protein CyoD [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 110
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/107 (47%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + + S+G+ K L+GF+LS+ILT IPF +VM G F + M +T+V A+ QI V
Sbjct: 3 THSVDNHGASHGSAKSYLIGFVLSVILTAIPFWMVMDGGFTHQ-TMLITVVAMAVVQIFV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV+FLHM+T E+ W+++A++FT++++AI VGS+W+MY+LN NMM
Sbjct: 62 HLVYFLHMNTSSEERWNLVALVFTVLIIAIVVVGSLWIMYNLNINMM 108
>gi|312962953|ref|ZP_07777439.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens
WH6]
gi|311282722|gb|EFQ61317.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens
WH6]
Length = 111
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ + S+G+ K +GFILS+ILT+IPFG+VM K+I + ++ A+ Q
Sbjct: 1 MANAHSHDSHDASHGSVKSYAIGFILSVILTLIPFGLVMYPTL-PKSITLMIVLAFAVIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++VHLV+FLH+ +++A +F +++ + S+W+M+ ++ MM+
Sbjct: 60 VLVHLVYFLHLDRSEAQRENVIAFVFAGLVIVLLVGLSLWIMFSIHTYMMA 110
>gi|238920118|ref|YP_002933633.1| cytochrome o ubiquinol oxidase subunit IV [Edwardsiella ictaluri
93-146]
gi|238869687|gb|ACR69398.1| cytochrome o ubiquinol oxidase subunit IV, putative [Edwardsiella
ictaluri 93-146]
Length = 112
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + + +G K L+GFILS++LT+IPF +VM G + +V A+
Sbjct: 1 MSHSSHETSHGGAGHGGVKSYLIGFILSIVLTVIPFAVVMSGGVAHSTTL-AVVVGMAVI 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+IVHLV FLHM+T + W+++A++FT +++ I VGS+W+MY+LN NMM
Sbjct: 60 QVIVHLVCFLHMNTSSQGRWNLVALLFTAVIIGIVVVGSLWIMYNLNINMM 110
>gi|319406525|emb|CBI80167.1| Cytochrome o ubiquinol oxidase protein cyoD (modular protein)
[Bartonella sp. 1-1C]
Length = 158
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73
+ LVGFIL+++ T+ F VM G I I + A+ QIIV +VFFLH+++
Sbjct: 9 SIGSYLVGFILAVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIVQIVFFLHLNS 68
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W++ A++FT + I G+ W + HLN NMM
Sbjct: 69 GPDARWNLTALLFTAMCAFIIIGGTWWAISHLNYNMM 105
>gi|17224969|gb|AAL37191.1|AF321090_3 cytochrome o ubiquinol oxidase D [Pseudomonas putida]
Length = 111
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ + +G+ K +GF LS+ILT+IPFG+VM K+ ++L A+ Q
Sbjct: 1 MANAHSHDSHDAGHGSVKSYAIGFSLSVILTVIPFGLVMYPTL-PKSTTLAIVLLFAVIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+IVHL +FLH+ + +++A +FT I++ + S+W+M+ ++ MM+
Sbjct: 60 VIVHLYYFLHLDRSIAQRNNVIAFVFTAIVIVLLVGLSLWIMFSIHTYMMA 110
>gi|332290095|ref|YP_004420947.1| cytochrome o ubiquinol oxidase subunit IV [Gallibacterium anatis
UMN179]
gi|330432991|gb|AEC18050.1| cytochrome o ubiquinol oxidase subunit IV [Gallibacterium anatis
UMN179]
Length = 110
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M YDN H+ +G+ K L+GF LS+ILT+IPF +VM G K + + I + A+ Q
Sbjct: 1 MSYDN-HDYAATEHGSVKSYLIGFGLSVILTLIPFLMVMNGSA-SKMSLLVIIAVTAVIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+IV LV FLHM T + W++++ IFT I++ + S+W+M+ LN NMM+
Sbjct: 59 LIVQLVCFLHMGTSEDGRWNLISFIFTAIVILLLVALSIWIMWSLNANMMA 109
>gi|13475709|ref|NP_107276.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium loti
MAFF303099]
gi|14026465|dbj|BAB53062.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium loti
MAFF303099]
Length = 125
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/104 (51%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K L+GF+LS+ILT IPF +VM G +K + I+ A+ QI+VH+VFFLHM T
Sbjct: 21 SFKGYLIGFVLSVILTAIPFWLVMSGAIDNKQATAIVIMAFAVVQIVVHMVFFLHMKTAS 80
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS-MEGMRSI 118
E GWS++A+IFT+I+V I GS+WVMYHLN NMM + MR +
Sbjct: 81 EGGWSMLALIFTLILVVIVLTGSLWVMYHLNANMMPGLHDMREM 124
>gi|187734216|ref|YP_001879139.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii CDC
3083-94]
gi|187431208|gb|ACD10482.1| cytochrome o ubiquinol oxidase, subunit IV [Shigella boydii CDC
3083-94]
Length = 109
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI A+ Q
Sbjct: 1 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTIRAMAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|184158692|ref|YP_001847031.1| Heme/copper-type cytochrome/quinol oxidase subunit 4 [Acinetobacter
baumannii ACICU]
gi|213158554|ref|YP_002319852.1| cytochrome O ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB0057]
gi|215482993|ref|YP_002325198.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB307-0294]
gi|239501440|ref|ZP_04660750.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB900]
gi|293609458|ref|ZP_06691760.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|301345100|ref|ZP_07225841.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB056]
gi|301510828|ref|ZP_07236065.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB058]
gi|301595309|ref|ZP_07240317.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB059]
gi|332850731|ref|ZP_08432978.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii
6013150]
gi|332866968|ref|ZP_08437285.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii
6013113]
gi|332873684|ref|ZP_08441627.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii
6014059]
gi|183210286|gb|ACC57684.1| Heme/copper-type cytochrome/quinol oxidase, subunit 4
[Acinetobacter baumannii ACICU]
gi|193077738|gb|ABO12596.2| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
ATCC 17978]
gi|213057714|gb|ACJ42616.1| cytochrome O ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB0057]
gi|213988781|gb|ACJ59080.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
AB307-0294]
gi|292827910|gb|EFF86273.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|322507498|gb|ADX02952.1| cyoD [Acinetobacter baumannii 1656-2]
gi|323518606|gb|ADX92987.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
TCDC-AB0715]
gi|325122720|gb|ADY82243.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter
calcoaceticus PHEA-2]
gi|332730568|gb|EGJ61884.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii
6013150]
gi|332734297|gb|EGJ65425.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii
6013113]
gi|332738072|gb|EGJ68956.1| cytochrome o ubiquinol oxidase, subunit IV [Acinetobacter baumannii
6014059]
Length = 109
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ HN S+G KQ VGFILS+ILTIIPFG+VM G F + ++ I + A+AQ++V
Sbjct: 3 SHEHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGF-SRGLLVTVIAITAVAQVLV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LV+FLHM+T E W+++A I+TI+ +A+ +GS+W+M +L+ NMM
Sbjct: 62 QLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMM 108
>gi|283834252|ref|ZP_06353993.1| cytochrome o ubiquinol oxidase, subunit IV [Citrobacter youngae
ATCC 29220]
gi|291069774|gb|EFE07883.1| cytochrome o ubiquinol oxidase, subunit IV [Citrobacter youngae
ATCC 29220]
Length = 109
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ QI+V
Sbjct: 2 SHSNESGGASHGSVKTYMTGFILSIILTVIPFWMVMTGSASP-AVILGTILAMAVVQILV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM++K ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNSKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|260426875|ref|ZP_05780854.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45]
gi|260421367|gb|EEX14618.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45]
Length = 128
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Query: 5 NIHNMNM-HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ H+ + H +GT Q ++GF L+ ILTIIPF +VM L + + I+ QIIV
Sbjct: 2 SAHSHSESHGHGTMGQLMIGFALAAILTIIPFFLVMVDTGLSRTALVGIIMGLGAVQIIV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
HLV+FLH+++ E+GW+++A +F+++++ I GS+WVM+++N NMM M M
Sbjct: 62 HLVYFLHLNSSSEEGWTLLASMFSVVILVIVLAGSLWVMHNMNENMMPMPDM 113
>gi|157146955|ref|YP_001454274.1| cytochrome o ubiquinol oxidase subunit IV [Citrobacter koseri ATCC
BAA-895]
gi|157084160|gb|ABV13838.1| hypothetical protein CKO_02732 [Citrobacter koseri ATCC BAA-895]
Length = 109
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 1 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGTGSP-AVILGTILAMAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|15800159|ref|NP_286171.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
EDL933]
gi|15829737|ref|NP_308510.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. Sakai]
gi|16128414|ref|NP_414963.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str.
K-12 substr. MG1655]
gi|24111811|ref|NP_706321.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a
str. 301]
gi|30061928|ref|NP_836099.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a
str. 2457T]
gi|74311004|ref|YP_309423.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sonnei Ss046]
gi|82542917|ref|YP_406864.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii Sb227]
gi|89107299|ref|AP_001079.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str.
K-12 substr. W3110]
gi|110804456|ref|YP_687976.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 5 str.
8401]
gi|157157013|ref|YP_001461615.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
E24377A]
gi|157159954|ref|YP_001457272.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli HS]
gi|168749891|ref|ZP_02774913.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4113]
gi|168756971|ref|ZP_02781978.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4401]
gi|168761635|ref|ZP_02786642.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4501]
gi|168776265|ref|ZP_02801272.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4196]
gi|168800312|ref|ZP_02825319.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC508]
gi|170021199|ref|YP_001726153.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ATCC
8739]
gi|170080015|ref|YP_001729335.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str.
K-12 substr. DH10B]
gi|170683697|ref|YP_001742570.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
SMS-3-5]
gi|188496374|ref|ZP_03003644.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 53638]
gi|191166691|ref|ZP_03028518.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B7A]
gi|193065222|ref|ZP_03046295.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E22]
gi|195938504|ref|ZP_03083886.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. EC4024]
gi|208815375|ref|ZP_03256554.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4045]
gi|209395894|ref|YP_002269075.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4115]
gi|209917645|ref|YP_002291729.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli SE11]
gi|218549903|ref|YP_002383694.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii
ATCC 35469]
gi|218552995|ref|YP_002385908.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI1]
gi|218693892|ref|YP_002401559.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 55989]
gi|218698659|ref|YP_002406288.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI39]
gi|218703712|ref|YP_002411231.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UMN026]
gi|238899717|ref|YP_002925513.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli BW2952]
gi|253774583|ref|YP_003037414.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160498|ref|YP_003043606.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B str.
REL606]
gi|254791613|ref|YP_003076450.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. TW14359]
gi|256020399|ref|ZP_05434264.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sp. D9]
gi|256023954|ref|ZP_05437819.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia sp. 4_1_40B]
gi|260842630|ref|YP_003220408.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O103:H2
str. 12009]
gi|260853652|ref|YP_003227543.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O26:H11
str. 11368]
gi|260866590|ref|YP_003232992.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O111:H-
str. 11128]
gi|261223910|ref|ZP_05938191.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. FRIK2000]
gi|261256376|ref|ZP_05948909.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. FRIK966]
gi|291281336|ref|YP_003498154.1| Cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli
O55:H7 str. CB9615]
gi|293403549|ref|ZP_06647640.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
FVEC1412]
gi|293408578|ref|ZP_06652417.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B354]
gi|293413684|ref|ZP_06656333.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B185]
gi|293418499|ref|ZP_06660934.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B088]
gi|297516402|ref|ZP_06934788.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli OP50]
gi|298379161|ref|ZP_06989042.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
FVEC1302]
gi|300818242|ref|ZP_07098453.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
107-1]
gi|300820328|ref|ZP_07100480.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
119-7]
gi|300900497|ref|ZP_07118664.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
198-1]
gi|300903306|ref|ZP_07121234.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
84-1]
gi|300918190|ref|ZP_07134797.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
115-1]
gi|300924154|ref|ZP_07140146.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
182-1]
gi|300930271|ref|ZP_07145684.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
187-1]
gi|300957994|ref|ZP_07170159.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
175-1]
gi|301022580|ref|ZP_07186452.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
69-1]
gi|301301577|ref|ZP_07207712.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
124-1]
gi|301330705|ref|ZP_07223307.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
78-1]
gi|301647352|ref|ZP_07247164.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
146-1]
gi|307137072|ref|ZP_07496428.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H736]
gi|307312193|ref|ZP_07591829.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli W]
gi|309794841|ref|ZP_07689262.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
145-7]
gi|331661808|ref|ZP_08362731.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA143]
gi|331666783|ref|ZP_08367657.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA271]
gi|331681823|ref|ZP_08382456.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H299]
gi|78099997|sp|P0ABJ7|CYOD_ECO57 RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD;
Short=Ubiquinol oxidase chain D
gi|78099998|sp|P0ABJ6|CYOD_ECOLI RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD;
Short=Ubiquinol oxidase chain D
gi|78099999|sp|P0ABJ8|CYOD_SHIFL RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD;
Short=Ubiquinol oxidase chain D
gi|12513288|gb|AAG54779.1|AE005222_4 cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. EDL933]
gi|145655|gb|AAA23634.1| cytochrome o ubiquinol oxidase C subunit [Escherichia coli]
gi|1786632|gb|AAC73532.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str.
K-12 substr. MG1655]
gi|13359940|dbj|BAB33906.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. Sakai]
gi|24050601|gb|AAN42028.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a
str. 301]
gi|30040172|gb|AAP15905.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a
str. 2457T]
gi|73854481|gb|AAZ87188.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sonnei Ss046]
gi|81244328|gb|ABB65036.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii Sb227]
gi|85674569|dbj|BAE76209.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str.
K12 substr. W3110]
gi|110614004|gb|ABF02671.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 5 str.
8401]
gi|157065634|gb|ABV04889.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli HS]
gi|157079043|gb|ABV18751.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
E24377A]
gi|169756127|gb|ACA78826.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ATCC
8739]
gi|169887850|gb|ACB01557.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli str.
K-12 substr. DH10B]
gi|170521415|gb|ACB19593.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
SMS-3-5]
gi|187768304|gb|EDU32148.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4196]
gi|188015898|gb|EDU54020.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4113]
gi|188491573|gb|EDU66676.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli 53638]
gi|189356033|gb|EDU74452.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4401]
gi|189368086|gb|EDU86502.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4501]
gi|189377391|gb|EDU95807.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC508]
gi|190903202|gb|EDV62924.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli B7A]
gi|192927196|gb|EDV81817.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli E22]
gi|208732023|gb|EDZ80711.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4045]
gi|209157294|gb|ACI34727.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
O157:H7 str. EC4115]
gi|209743934|gb|ACI70274.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli]
gi|209743936|gb|ACI70275.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli]
gi|209743938|gb|ACI70276.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli]
gi|209743940|gb|ACI70277.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli]
gi|209743942|gb|ACI70278.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli]
gi|209910904|dbj|BAG75978.1| cytochrome O ubiquinol oxidase subunit IV [Escherichia coli SE11]
gi|218350624|emb|CAU96316.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 55989]
gi|218357444|emb|CAQ90083.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii
ATCC 35469]
gi|218359763|emb|CAQ97304.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI1]
gi|218368645|emb|CAR16384.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli IAI39]
gi|218430809|emb|CAR11683.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UMN026]
gi|238860710|gb|ACR62708.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli BW2952]
gi|242376210|emb|CAQ30901.1| cytochrome bo terminal oxidase subunit IV, subunit of cytochrome bo
terminal oxidase [Escherichia coli BL21(DE3)]
gi|253325627|gb|ACT30229.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972399|gb|ACT38070.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B str.
REL606]
gi|253976609|gb|ACT42279.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
BL21(DE3)]
gi|254591013|gb|ACT70374.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. TW14359]
gi|257752301|dbj|BAI23803.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O26:H11
str. 11368]
gi|257757777|dbj|BAI29274.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O103:H2
str. 12009]
gi|257762946|dbj|BAI34441.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O111:H-
str. 11128]
gi|260450384|gb|ACX40806.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli DH1]
gi|281599765|gb|ADA72749.1| Cytochrome O ubiquinol oxidase protein CyoD [Shigella flexneri
2002017]
gi|284920239|emb|CBG33298.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D)
[Escherichia coli 042]
gi|290761209|gb|ADD55170.1| Cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli
O55:H7 str. CB9615]
gi|291325027|gb|EFE64442.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B088]
gi|291429402|gb|EFF02422.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
FVEC1412]
gi|291433742|gb|EFF06715.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B185]
gi|291471756|gb|EFF14239.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli B354]
gi|298280274|gb|EFI21778.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
FVEC1302]
gi|300315330|gb|EFJ65114.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
175-1]
gi|300355978|gb|EFJ71848.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
198-1]
gi|300397461|gb|EFJ80999.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
69-1]
gi|300404601|gb|EFJ88139.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
84-1]
gi|300414641|gb|EFJ97951.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
115-1]
gi|300419607|gb|EFK02918.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
182-1]
gi|300461843|gb|EFK25336.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
187-1]
gi|300527113|gb|EFK48182.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
119-7]
gi|300529133|gb|EFK50195.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
107-1]
gi|300843074|gb|EFK70834.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
124-1]
gi|300843366|gb|EFK71126.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
78-1]
gi|301074497|gb|EFK89303.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
146-1]
gi|306907695|gb|EFN38197.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli W]
gi|308121494|gb|EFO58756.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
145-7]
gi|313646949|gb|EFS11406.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri 2a
str. 2457T]
gi|315059709|gb|ADT74036.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli W]
gi|315135111|dbj|BAJ42270.1| cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli DH1]
gi|315256254|gb|EFU36222.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
85-1]
gi|320173753|gb|EFW48936.1| Cytochrome O ubiquinol oxidase subunit IV [Shigella dysenteriae CDC
74-1112]
gi|320192843|gb|EFW67483.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. EC1212]
gi|320638423|gb|EFX08137.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. G5101]
gi|320643803|gb|EFX12926.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H-
str. 493-89]
gi|320649154|gb|EFX17732.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H-
str. H 2687]
gi|320656047|gb|EFX23963.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320661197|gb|EFX28628.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O55:H7
str. USDA 5905]
gi|320665173|gb|EFX32266.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. LSU-61]
gi|323184741|gb|EFZ70112.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 1357]
gi|323379726|gb|ADX51994.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli KO11]
gi|323938614|gb|EGB34863.1| cytochrome o ubiquinol oxidase IV [Escherichia coli E1520]
gi|323943235|gb|EGB39391.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli E482]
gi|323945333|gb|EGB41389.1| cytochrome o ubiquinol oxidase IV [Escherichia coli H120]
gi|323963418|gb|EGB58980.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H489]
gi|323965115|gb|EGB60574.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli M863]
gi|323972282|gb|EGB67492.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli TA007]
gi|323976087|gb|EGB71180.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
TW10509]
gi|324016711|gb|EGB85930.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
117-3]
gi|324114656|gb|EGC08624.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii
B253]
gi|324116916|gb|EGC10829.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli E1167]
gi|326341191|gb|EGD64983.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. 1044]
gi|326346034|gb|EGD69773.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli O157:H7
str. 1125]
gi|327254755|gb|EGE66371.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
STEC_7v]
gi|331060230|gb|EGI32194.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA143]
gi|331066007|gb|EGI37891.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA271]
gi|331081025|gb|EGI52190.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli H299]
gi|332341792|gb|AEE55126.1| cytochrome O ubiquinol oxidase subunit IV CyoD [Escherichia coli
UMNK88]
Length = 109
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 1 MSHSTDH--SGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|332094584|gb|EGI99630.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii 5216-82]
Length = 109
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + + S+G+ K ++GFILS+ILT+IPF +VM G ++ TI+ A+ Q++V
Sbjct: 2 SHSTDHSGASHGSVKTYMIGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|157369330|ref|YP_001477319.1| cytochrome o ubiquinol oxidase subunit IV [Serratia proteamaculans
568]
gi|157321094|gb|ABV40191.1| Cytochrome o ubiquinol oxidase subunit IV [Serratia proteamaculans
568]
Length = 112
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + + S+G+ K L+GFILS+ILT+IPF +VM G I+ +V A+
Sbjct: 1 MSHSSHETSHGGASHGSVKTYLIGFILSIILTVIPFAMVMSGTASHSTIL-AVVVGMAVI 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VHL++FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM
Sbjct: 60 QVVVHLIYFLHMNTSSEERWNLVALLFTAMIIGIVVVGSLWIMYNLNINMM 110
>gi|213621013|ref|ZP_03373796.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 105
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V
Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVVQILV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
HLV FLHM+TK ++GW++ A IFT++++AI VGS+W+M++LN N
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYN 105
>gi|94309896|ref|YP_583106.1| cytochrome c oxidase subunit IV [Cupriavidus metallidurans CH34]
gi|93353748|gb|ABF07837.1| Cytochrome o ubiquinol oxidase subunit IV [Cupriavidus
metallidurans CH34]
gi|222871193|gb|EEF08324.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
H + + K ++GF+L++ILT+IPF IVM G + M I+ A QI+VHL +FL
Sbjct: 13 ASHGHSSVKSYVIGFVLAVILTVIPFKIVMDGTME-RGTMLWIILGMAAVQIVVHLKYFL 71
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
H+ W++MA++FT++++ I GS+W+M+++N NMM
Sbjct: 72 HLDGSNGQRWNVMALLFTVLILFIVLAGSLWIMHNMNANMMP 113
>gi|325291581|ref|YP_004277445.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium sp. H13-3]
gi|325059434|gb|ADY63125.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium sp. H13-3]
Length = 131
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/98 (44%), Positives = 69/98 (70%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K ++GF++S+ILT IPF +VM +K ++ + I+ + QI VH+++FLHM TK
Sbjct: 26 TFKSYMIGFVMSVILTAIPFWLVMGDVLENKTLLVIAIMGLGVIQIFVHMIYFLHMDTKS 85
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
E GW+ MA+IFT++++ I GS+WVMY++N NMM +
Sbjct: 86 EGGWTFMALIFTVVVLLITLSGSLWVMYNMNKNMMPLH 123
>gi|222107117|ref|YP_002547908.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium vitis S4]
gi|221738296|gb|ACM39192.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium vitis S4]
Length = 132
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/100 (50%), Positives = 73/100 (73%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72
S+G+ K ++GFILS+ LT IPF +VM G +K ++ ++ Q++VH+++FLHM+
Sbjct: 24 SHGSMKTYMIGFILSVTLTSIPFYLVMSGSLTNKALLAGIVMGLGAIQVVVHMIYFLHMN 83
Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
TK E GW++MA+IFTII+V I GS+WVM+HLN NMM M
Sbjct: 84 TKSEGGWNMMALIFTIIVVVIALSGSLWVMHHLNTNMMPM 123
>gi|329890316|ref|ZP_08268659.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas diminuta
ATCC 11568]
gi|328845617|gb|EGF95181.1| cytochrome o ubiquinol oxidase subunit IV [Brevundimonas diminuta
ATCC 11568]
Length = 128
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K L+GF LS++LT IPF +VM G + + L I A+ QI+VH++FFLHM+ K
Sbjct: 26 TYKGYLIGFGLSVVLTAIPFWLVMAGVLAPQ-LTGLIITAFAVVQIVVHMIFFLHMNHKS 84
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
E GW+++A+IFT+++V I GS+WVMYHLN NMM + M+ +
Sbjct: 85 EGGWNMLALIFTLVIVVIAVAGSVWVMYHLNTNMMPVHDMQGM 127
>gi|238754225|ref|ZP_04615582.1| hypothetical protein yruck0001_21740 [Yersinia ruckeri ATCC 29473]
gi|238707472|gb|EEP99832.1| hypothetical protein yruck0001_21740 [Yersinia ruckeri ATCC 29473]
Length = 110
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + S+G+ K L+GFILS+ILT+IPF +VM+G ++ T+V A+ Q
Sbjct: 1 MSHSTT-GHGGASHGSLKSYLIGFILSIILTVIPFVMVMQGTA-SHTMILATVVTLAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
IIVHLV+FLHM+ K E+ W+++A +FT++++AI VGS+W+MY+LN NMM
Sbjct: 59 IIVHLVYFLHMNGKSEERWNLVAFLFTVMIIAIVVVGSLWIMYNLNINMM 108
>gi|220924640|ref|YP_002499942.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
nodulans ORS 2060]
gi|219949247|gb|ACL59639.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
nodulans ORS 2060]
Length = 130
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + + GF+LS ILT IPF +VM D+ + ++ A+ QI+VH+V+FLHM+T+
Sbjct: 24 TFEGYVTGFVLSAILTAIPFWLVMANVLDDRVQTTIAVLAFAVIQIVVHMVYFLHMNTRS 83
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
E GW+++A+IFT+ +V I GS+WVM+HLN NMM + H
Sbjct: 84 EGGWTVLALIFTVTLVVITLTGSIWVMHHLNTNMMPLSAEHVRH 127
>gi|270263562|ref|ZP_06191831.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera
4Rx13]
gi|270042446|gb|EFA15541.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera
4Rx13]
Length = 112
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + + S+G+ K L+GFILS+ILT+IPF +VM G I+ +V A+
Sbjct: 1 MSHSSHETSHGGASHGSVKSYLIGFILSIILTVIPFAMVMSGTASHSTIL-AVVVGMAVI 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+IVHL++FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM
Sbjct: 60 QVIVHLIYFLHMNTSSEERWNLVALLFTAMIIGIVVVGSLWIMYNLNINMM 110
>gi|91209498|ref|YP_539484.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UTI89]
gi|110640689|ref|YP_668417.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 536]
gi|215485510|ref|YP_002327941.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O127:H6
str. E2348/69]
gi|218557338|ref|YP_002390251.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli S88]
gi|218688292|ref|YP_002396504.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ED1a]
gi|237707577|ref|ZP_04538058.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia sp.
3_2_53FAA]
gi|300997384|ref|ZP_07181724.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
200-1]
gi|91071072|gb|ABE05953.1| cytochrome O ubiquinol oxidase protein CyoD [Escherichia coli
UTI89]
gi|110342281|gb|ABG68518.1| cytochrome O ubiquinol oxidase C subunit [Escherichia coli 536]
gi|215263582|emb|CAS07912.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O127:H6
str. E2348/69]
gi|218364107|emb|CAR01772.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli S88]
gi|218425856|emb|CAR06662.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli ED1a]
gi|222032224|emb|CAP74963.1| Cytochrome o ubiquinol oxidase protein cyoD [Escherichia coli LF82]
gi|226898787|gb|EEH85046.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia sp.
3_2_53FAA]
gi|281177599|dbj|BAI53929.1| cytochrome O ubiquinol oxidase subunit IV [Escherichia coli SE15]
gi|294494005|gb|ADE92761.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli
IHE3034]
gi|300304203|gb|EFJ58723.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
200-1]
gi|307628102|gb|ADN72406.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli UM146]
gi|312945006|gb|ADR25833.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli O83:H1
str. NRG 857C]
gi|315289856|gb|EFU49246.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
110-3]
gi|315299551|gb|EFU58799.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
16-3]
gi|323952959|gb|EGB48827.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H252]
gi|323958622|gb|EGB54325.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli H263]
gi|324010059|gb|EGB79278.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
57-2]
gi|324010689|gb|EGB79908.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
60-1]
Length = 109
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ QI+V
Sbjct: 2 SHSNASSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQILV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|306813105|ref|ZP_07447298.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli NC101]
gi|331656484|ref|ZP_08357446.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA206]
gi|305853868|gb|EFM54307.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli NC101]
gi|331054732|gb|EGI26741.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia coli TA206]
Length = 109
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + + S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q++V
Sbjct: 2 SHSNASSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|17547633|ref|NP_521035.1| transmembrane cytochrome O ubiquinol oxidase subunit IV [Ralstonia
solanacearum GMI1000]
gi|17429937|emb|CAD16621.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit iv)
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 121
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H + T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VH
Sbjct: 15 HGHATGGAGHATVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMGLAVVQIVVH 73
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
L++FLH+ W++MA +FT++++ I VGS+WVM+++N NMM
Sbjct: 74 LIYFLHLDGSSAQRWNVMAFLFTLLILVIVIVGSLWVMHNMNVNMM 119
>gi|222084384|ref|YP_002542913.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium
radiobacter K84]
gi|221721832|gb|ACM24988.1| cytochrome o ubiquinol oxidase subunit IV [Agrobacterium
radiobacter K84]
Length = 133
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 56/110 (50%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
S+GT K + GF+LS+ILT IPF +VM F D + I++ QIIVH+++FLH
Sbjct: 23 EASHGTFKSYMTGFVLSVILTAIPFWLVMGKVFADPVVTAALIMVFGAIQIIVHMIYFLH 82
Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM--MSMEGMRSI 118
M+TK E GW++MA+IFTI++V I GS+WVM+HLN NM MS E MR++
Sbjct: 83 MNTKSEGGWNMMALIFTIVLVIIALSGSLWVMHHLNANMMVMSPEMMRNM 132
>gi|253687435|ref|YP_003016625.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754013|gb|ACT12089.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 110
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + S+G+ K ++GF+LS+ILT+IPF +VM G N + T+V CA+ Q
Sbjct: 1 MSHSTT-DHSGASHGSVKSYVIGFVLSVILTVIPFSMVMSGTA-SHNAILFTVVGCAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++F ++++AI VGS+W+M ++NMM
Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVALVFAVLIIAIVVVGSIWIMMSAHHNMM 108
>gi|152980590|ref|YP_001354327.1| cytochrome o ubiquinol oxidase operon protein [Janthinobacterium
sp. Marseille]
gi|151280667|gb|ABR89077.1| cytochrome o ubiquinol oxidase operon protein [Janthinobacterium
sp. Marseille]
Length = 149
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 67/96 (69%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K +GFILS+ILT IPF +VM F + I+ A QI+VH+V+FLHM+TK
Sbjct: 28 SLKSYTIGFILSVILTAIPFWLVMGKVFDSSSTTAFVILGFAAVQIVVHMVYFLHMNTKS 87
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
E GWS++ +IFTI++V I GS+WVMYH+N+NMM
Sbjct: 88 EGGWSMLGLIFTIMVVVIMLAGSIWVMYHMNHNMMP 123
>gi|213425865|ref|ZP_03358615.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
Length = 109
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 74/107 (69%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V
Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVVQILV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A IFT +++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTALIIAILVVGSIWIMWNLNYNMM 107
>gi|227113457|ref|ZP_03827113.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|227327520|ref|ZP_03831544.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 110
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + S+G+ K ++GF+LS+ILT+IPF +VM G I+ T+V CA+ Q
Sbjct: 1 MSHSTT-DHSGASHGSVKSYVIGFVLSVILTVIPFSMVMSGTASHSAILF-TVVGCAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++F ++++AI VGS+W+M ++NMM
Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVALVFAVLIIAIVVVGSIWIMMSAHHNMM 108
>gi|311108526|ref|YP_003981379.1| cytochrome O ubiquinol oxidase subunit IV 2 [Achromobacter
xylosoxidans A8]
gi|310763215|gb|ADP18664.1| cytochrome O ubiquinol oxidase subunit IV 2 [Achromobacter
xylosoxidans A8]
Length = 134
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K + GF+L+ +LT IPF +VM F + L I+ A+ QI+VH+++FLHM TK
Sbjct: 29 TFKSYMTGFVLAAVLTAIPFWLVMGRVFTESRTTALVILAFAVVQIVVHIIYFLHMDTKS 88
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
E GW+++A+IFT+++V I GS+W+MYHL++NMM M MR +
Sbjct: 89 ESGWNMLALIFTLVLVVITLSGSIWIMYHLDSNMMPMSTHDMRKM 133
>gi|73540688|ref|YP_295208.1| cytochrome C oxidase subunit IV [Ralstonia eutropha JMP134]
gi|72118101|gb|AAZ60364.1| Prokaryotic Cytochrome C oxidase subunit IV [Ralstonia eutropha
JMP134]
Length = 116
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
H + + K +GF+L++ILT+IPF IVM G D+ L I+ A Q++VHL +FL
Sbjct: 12 ESHGHSSFKSYAIGFVLAVILTVIPFKIVMDGTM-DRGTTLLIILGMAAVQVVVHLKYFL 70
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HM E W++M+ +FT++++ I GS+W+M+++N NMM
Sbjct: 71 HMDGSKEQRWNVMSFLFTLLILFIVLAGSLWIMHNMNANMMP 112
>gi|170767810|ref|ZP_02902263.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia albertii
TW07627]
gi|170123298|gb|EDS92229.1| cytochrome o ubiquinol oxidase, subunit IV [Escherichia albertii
TW07627]
Length = 109
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + S+G+ K + GFILS+ILT+IPF +VM G ++ TI++ A+ Q++V
Sbjct: 2 SHSNASGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILVMAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|50085513|ref|YP_047023.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ADP1]
gi|49531489|emb|CAG69201.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter sp. ADP1]
Length = 108
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 53/110 (48%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +D HN S+G KQ +GFILS++LTIIPFG+VM G F + ++ I + A+AQ
Sbjct: 1 MSHD--HNSAGASHGNFKQYTIGFILSVVLTIIPFGMVMAGGF-GRGLLMTVIGITAVAQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++V LVFFLHM+T E W+++A I+T++ +AI VGS+W+M +L+ NMM
Sbjct: 58 VLVQLVFFLHMNTSSEQRWNLIAFIYTVLCIAILLVGSVWIMNYLHFNMM 107
>gi|167563463|ref|ZP_02356379.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis EO147]
Length = 110
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + H+ ++GT + GF+LS++LT FG+VM G + + + + A AQ
Sbjct: 1 MAHTH-HSYGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAGAQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+T W++MA +T++ I G++WVM+++N NMMS
Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTVLTALILIFGTLWVMHNVNMNMMS 109
>gi|16759420|ref|NP_455037.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763821|ref|NP_459436.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29142808|ref|NP_806150.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56414404|ref|YP_151479.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62179052|ref|YP_215469.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161504383|ref|YP_001571495.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|161615370|ref|YP_001589335.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|167551747|ref|ZP_02345500.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167992292|ref|ZP_02573390.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168232415|ref|ZP_02657473.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237552|ref|ZP_02662610.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168240264|ref|ZP_02665196.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168261126|ref|ZP_02683099.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168465531|ref|ZP_02699413.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818951|ref|ZP_02830951.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194446490|ref|YP_002039682.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194450588|ref|YP_002044475.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194470587|ref|ZP_03076571.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194737366|ref|YP_002113471.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197250726|ref|YP_002145421.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264545|ref|ZP_03164619.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197363324|ref|YP_002142961.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|198243661|ref|YP_002214394.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200389690|ref|ZP_03216301.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204927364|ref|ZP_03218566.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|207855920|ref|YP_002242571.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213023462|ref|ZP_03337909.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
gi|213052103|ref|ZP_03344981.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213416725|ref|ZP_03349869.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
gi|213584681|ref|ZP_03366507.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
gi|213649241|ref|ZP_03379294.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|213857960|ref|ZP_03384931.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|224582278|ref|YP_002636076.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|238911428|ref|ZP_04655265.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|289825082|ref|ZP_06544434.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|25331177|pir||AC0557 cytochrome o ubiquinol oxidase C chain [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16418947|gb|AAL19395.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16501711|emb|CAD08899.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138440|gb|AAO70010.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56128661|gb|AAV78167.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62126685|gb|AAX64388.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|160865730|gb|ABX22353.1| hypothetical protein SARI_02494 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161364734|gb|ABX68502.1| hypothetical protein SPAB_03141 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405153|gb|ACF65375.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194408892|gb|ACF69111.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194456951|gb|EDX45790.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194712868|gb|ACF92089.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195631677|gb|EDX50197.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197094801|emb|CAR60334.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|197214429|gb|ACH51826.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197242800|gb|EDY25420.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197289479|gb|EDY28842.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197938177|gb|ACH75510.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199602135|gb|EDZ00681.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204324029|gb|EDZ09224.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205323488|gb|EDZ11327.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205329509|gb|EDZ16273.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205333521|gb|EDZ20285.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205340021|gb|EDZ26785.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205344082|gb|EDZ30846.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205349794|gb|EDZ36425.1| cytochrome o ubiquinol oxidase, subunit IV [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206707723|emb|CAR32008.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|224466805|gb|ACN44635.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261245723|emb|CBG23520.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992153|gb|ACY87038.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157051|emb|CBW16535.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911473|dbj|BAJ35447.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320084713|emb|CBY94504.1| Cytochrome o ubiquinol oxidase protein cyoD Ubiquinol oxidase chain
D [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321226016|gb|EFX51067.1| Cytochrome O ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322614718|gb|EFY11647.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322618824|gb|EFY15712.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322623531|gb|EFY20370.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322629171|gb|EFY25950.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322631891|gb|EFY28645.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322637372|gb|EFY34074.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642057|gb|EFY38667.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322647876|gb|EFY44351.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652554|gb|EFY48908.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322653284|gb|EFY49617.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660567|gb|EFY56803.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322664719|gb|EFY60912.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322669228|gb|EFY65378.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322670773|gb|EFY66906.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322678988|gb|EFY75043.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322682016|gb|EFY78041.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322685155|gb|EFY81152.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|322713513|gb|EFZ05084.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323128759|gb|ADX16189.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|323192952|gb|EFZ78175.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323196966|gb|EFZ82108.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323203951|gb|EFZ88968.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323206964|gb|EFZ91917.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323210818|gb|EFZ95690.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323214509|gb|EFZ99260.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323223066|gb|EGA07409.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323227015|gb|EGA11196.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323230167|gb|EGA14287.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323233905|gb|EGA17994.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323238401|gb|EGA22459.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323244089|gb|EGA28098.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323246249|gb|EGA30232.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251875|gb|EGA35738.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323257872|gb|EGA41551.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323261115|gb|EGA44707.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323264955|gb|EGA48454.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323272518|gb|EGA55925.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326622142|gb|EGE28487.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|332987389|gb|AEF06372.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 109
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V
Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVVQILV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A IFT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|224826961|ref|ZP_03700059.1| cytochrome o ubiquinol oxidase subunit IV [Lutiella nitroferrum
2002]
gi|224600794|gb|EEG06979.1| cytochrome o ubiquinol oxidase subunit IV [Lutiella nitroferrum
2002]
Length = 107
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H S+G+ K L GF+LS+ILT+IPF +VM G + + TI A+ Q
Sbjct: 1 MSQAHDH---AASHGSVKSYLTGFVLSVILTVIPFWLVMNGNLNPHDTLL-TIAGFAVVQ 56
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHL +FLH+ E + +A +FT +++ + S+W+++ + MM
Sbjct: 57 ILVHLKYFLHLDFTTEGRVNTLAFLFTALVIVLLVGLSVWIIFSADALMMP 107
>gi|50120079|ref|YP_049246.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium
atrosepticum SCRI1043]
gi|261822515|ref|YP_003260621.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium wasabiae
WPP163]
gi|49610605|emb|CAG74050.1| cytochrome O ubiquinol oxidase subunit IV [Pectobacterium
atrosepticum SCRI1043]
gi|261606528|gb|ACX89014.1| cytochrome o ubiquinol oxidase subunit IV [Pectobacterium wasabiae
WPP163]
Length = 110
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 77/110 (70%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + S+G+ K ++GF+LS+ILT+IPF +VM G N + T+V CA+ Q
Sbjct: 1 MSHSTT-DHAGASHGSVKSYVIGFVLSVILTVIPFSMVMSGTA-SHNAILFTVVGCAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++F ++++AI VGS+W+M ++NMM
Sbjct: 59 ILVHLVYFLHLNTSSEERWNVVALVFAVLIIAIVVVGSIWIMMSAHHNMM 108
>gi|322834054|ref|YP_004214081.1| cytochrome o ubiquinol oxidase subunit IV [Rahnella sp. Y9602]
gi|321169255|gb|ADW74954.1| cytochrome o ubiquinol oxidase subunit IV [Rahnella sp. Y9602]
Length = 110
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + S+G+ K +GFILS+ILT+IPF +VM +++ T+V AI Q
Sbjct: 1 MSHSAT-SHGGASHGSLKSYAIGFILSVILTVIPFAMVMTDTA-SHSLILGTVVASAIIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLVFFLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM
Sbjct: 59 IVVHLVFFLHMNTSSEERWNLVALLFTAVIIFIVVVGSLWIMYNLNLNMM 108
>gi|26246435|ref|NP_752474.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli CFT073]
gi|227884562|ref|ZP_04002367.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 83972]
gi|300988018|ref|ZP_07178498.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
45-1]
gi|301049630|ref|ZP_07196581.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
185-1]
gi|26106833|gb|AAN79018.1|AE016756_201 Cytochrome O ubiquinol oxidase protein cyoD [Escherichia coli
CFT073]
gi|227838648|gb|EEJ49114.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 83972]
gi|300298623|gb|EFJ55008.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli MS
185-1]
gi|300407570|gb|EFJ91108.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
45-1]
gi|307552335|gb|ADN45110.1| cytochrome o ubiquinol oxidase protein CyoD [Escherichia coli ABU
83972]
gi|315294192|gb|EFU53543.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
153-1]
Length = 109
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N+ S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 1 MSHSNV--SGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 ILVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|300937043|ref|ZP_07151909.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
21-1]
gi|300457874|gb|EFK21367.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
21-1]
Length = 109
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/110 (45%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N+ S+G+ K + GFILS+ILT+IPF +VM G ++ TI+ A+ Q
Sbjct: 1 MSHSNV--SGGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++VHLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 58 VLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|160899494|ref|YP_001565076.1| cytochrome o ubiquinol oxidase subunit IV [Delftia acidovorans
SPH-1]
gi|160365078|gb|ABX36691.1| cytochrome o ubiquinol oxidase subunit IV [Delftia acidovorans
SPH-1]
Length = 146
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 69/104 (66%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ T + GF+LS+ILT IPF +VM D+ + + A+ QI+VH+VFFLHM+
Sbjct: 30 HSTFSGYMWGFVLSIILTAIPFWLVMSNVISDRATAVMVLGGFAVVQILVHMVFFLHMNG 89
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
K+E GW++++ IFT++ VAI G++WVM+H+N NMM M +
Sbjct: 90 KIEGGWTLLSTIFTVVFVAIGIAGTLWVMFHMNTNMMPQHTMPA 133
>gi|91775645|ref|YP_545401.1| cytochrome C oxidase subunit IV [Methylobacillus flagellatus KT]
gi|91709632|gb|ABE49560.1| cytochrome bo3 quinol oxidase subunit 4 [Methylobacillus
flagellatus KT]
Length = 112
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + ++ + + K ++GF+LS+ILT+IPFG++M L + + +TI++ A+ Q
Sbjct: 1 MSHGHV-ERAGAGHASVKSYIIGFVLSVILTVIPFGLLMFPNDLSSSTILVTILVFAVVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLHM+T E W++MA IFT+I++AI VGS+WVM+HLN+NMM
Sbjct: 60 IVVHLVYFLHMNTSSEQSWNVMAFIFTVIILAIVVVGSLWVMFHLNHNMM 109
>gi|218679506|ref|ZP_03527403.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium
etli CIAT 894]
Length = 133
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT K + GF+LS+ILT IPF +VM G + + ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFKSYMAGFVLSVILTAIPFWLVMSGVIASPALTAVLVMGLGAVQIV 74
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
VH++FFLHM+T+ E GW+IMA+IFT+I+VAI GS+WVM+HLN
Sbjct: 75 VHMIFFLHMNTRSEGGWTIMALIFTLIIVAIALSGSLWVMHHLNT 119
>gi|205351751|ref|YP_002225552.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|205271532|emb|CAR36350.1| cytochrome o ubiquinol oxidase C subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|326626786|gb|EGE33129.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 109
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ S+G+ K + GFILS+ILT+IPF +VM G ++ +I+ A+ QI+V
Sbjct: 2 SHSTESGGASHGSVKTYMTGFILSVILTVIPFWMVMTGAASP-AVILGSILAMAVLQILV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A IFT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|114327937|ref|YP_745094.1| cytochrome O ubiquinol oxidase protein cyoD [Granulibacter
bethesdensis CGDNIH1]
gi|114316111|gb|ABI62171.1| cytochrome O ubiquinol oxidase protein cyoD [Granulibacter
bethesdensis CGDNIH1]
Length = 126
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + + + S+G+ ++GFILS+ILT F IV + ++++ + A+ QI
Sbjct: 4 AHAHGASDHGSSHGSVGSYIIGFILSVILTAAAFLIVAYK-LVPEHLILPGVAALAVIQI 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+VHLVFFLHM+ E W++ A +F+++++ I GS+W+MY+L + M
Sbjct: 63 LVHLVFFLHMNASSEQRWNVTAFVFSVVVLLILVSGSIWIMYNLTSRM 110
>gi|163857014|ref|YP_001631312.1| cytochrome 0 ubiquinol oxidase [Bordetella petrii DSM 12804]
gi|163260742|emb|CAP43044.1| Predicted cytochrome 0 ubiquinol oxidase [Bordetella petrii]
Length = 120
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Query: 1 MKYDNI----HNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLC 56
M +D I H + ++GT K LVGF LS++LT+ FG+VM G M IVLC
Sbjct: 1 MSHDTIAAADHGHDDAAHGTLKSYLVGFGLSILLTLASFGLVMSGAVPRSLAMPGIIVLC 60
Query: 57 AIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+AQ++V LV+FLHM ++ A +F + ++AI GS WV++++N NMM
Sbjct: 61 -VAQLLVQLVYFLHMGASRSQRDNLSAFVFAVFVIAIIVGGSAWVLHNMNANMM 113
>gi|326389123|ref|ZP_08210703.1| cytochrome o ubiquinol oxidase subunit IV [Novosphingobium
nitrogenifigens DSM 19370]
gi|326206354|gb|EGD57191.1| cytochrome o ubiquinol oxidase subunit IV [Novosphingobium
nitrogenifigens DSM 19370]
Length = 104
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 67/101 (66%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K GF+L++ILT+IPF +VM DK++ L I A Q+IVH+++FLHM+ K E
Sbjct: 1 MKDYATGFVLAVILTVIPFYLVMTDALGDKSLTTLVIAGFAGVQVIVHMIYFLHMNAKSE 60
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
GW+++A++FT I+V I G WVMYHLN+NMM M +
Sbjct: 61 GGWNLLALVFTCILVFIVLSGVTWVMYHLNHNMMPMPHNMN 101
>gi|113867651|ref|YP_726140.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16]
gi|113526427|emb|CAJ92772.1| bo3-type quinol oxidase, subunit IV [Ralstonia eutropha H16]
Length = 125
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
++H ++G+ + +G +LS+ LT+ F VM G +V +AQ++V
Sbjct: 8 SVHADQPAAHGSVRSYTIGLLLSVALTMASFAAVMTGSL-STQAAIALVVGLCVAQLLVQ 66
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114
LV+FLH+ T + T ++ I GS+WVM++ + NMM +
Sbjct: 67 LVYFLHLGTGPGQRGNTAIFACTGFLIVIVVAGSLWVMHNADINMMPTDM 116
>gi|300947920|ref|ZP_07162068.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
116-1]
gi|300452520|gb|EFK16140.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
116-1]
Length = 109
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + + S+G+ K + GFILS+ILT+I F +VM G ++ TI+ A+ Q++V
Sbjct: 2 SHSTDHSGASHGSVKTYMTGFILSIILTVISFWMVMTGAASP-AVILGTILAMAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV FLHM+TK ++GW++ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 61 HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMM 107
>gi|260773172|ref|ZP_05882088.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio metschnikovii CIP
69.14]
gi|260612311|gb|EEX37514.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio metschnikovii CIP
69.14]
Length = 112
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M++ ++G+ K+ L+GF+ S++LT+IPF +VM + I++CA+AQ
Sbjct: 1 MEHSYEQTHGGQAHGSVKEYLLGFLYSVLLTLIPFAMVMAD-IGSPTTKVVVILICAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V LVFFLHM+T E W+++ +F++++VAI VGSMW+M HLN+NM+
Sbjct: 60 ILVQLVFFLHMNTSSEQAWNVITAVFSVVIVAIVLVGSMWIMQHLNHNML 109
>gi|293392553|ref|ZP_06636873.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera DSM
4582]
gi|291424955|gb|EFE98164.1| cytochrome o ubiquinol oxidase subunit IV [Serratia odorifera DSM
4582]
Length = 112
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Query: 1 MKYDNIH-NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + + S+ + K ++GFILS+ILT+IPF +VM G + +V A+
Sbjct: 1 MSHSSHETSHGGASHSSVKSYVIGFILSVILTVIPFSMVMSGTA-SHATILAVVVGMAVI 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+IVHLV+FLHM+T E+ W+++A++FT +++ I VGS+W+MY+LN NMM
Sbjct: 60 QVIVHLVYFLHMNTSSEERWNLVALLFTAMIIGIVVVGSLWIMYNLNINMM 110
>gi|295691073|ref|YP_003594766.1| cytochrome o ubiquinol oxidase subunit IV [Caulobacter segnis ATCC
21756]
gi|295432976|gb|ADG12148.1| cytochrome o ubiquinol oxidase subunit IV [Caulobacter segnis ATCC
21756]
Length = 129
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
++G+ K ++GF+L++ILT IPF +VM + + ++ A+ Q++VH+++FLH
Sbjct: 19 GGAHGSLKDYVIGFVLAVILTAIPFWLVMGNVLPTAQMTAVAVMGLAVIQVLVHMIYFLH 78
Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
M+++ E GW+++A++FT+I+V I GS+WVM++LN +MM M+ +
Sbjct: 79 MNSRSEGGWTLLALMFTLILVVITLSGSLWVMHNLNTHMMPTMAHDMQQM 128
>gi|167570631|ref|ZP_02363505.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis C6786]
Length = 110
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + H+ ++GT + GF+LS++LT FG+VM G + + + + A Q
Sbjct: 1 MAHTH-HSHGDEAHGTVGGYIAGFMLSVLLTAASFGLVMGGVLPPREALVS-LAVLAGVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+T W++MA +T++ I G++WVM+++N NMMS
Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTVLTALILIFGTLWVMHNVNMNMMS 109
>gi|332532049|ref|ZP_08407932.1| cytochrome O ubiquinol oxidase, subunit IV [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038390|gb|EGI74834.1| cytochrome O ubiquinol oxidase, subunit IV [Pseudoalteromonas
haloplanktis ANT/505]
Length = 118
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 1 MKYDNIH-------NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI 53
M + H + + S+G+ K L+GF+LS+ILT IPF +VM+G F K +I
Sbjct: 1 MSHSETHALKQTQSDHHDESHGSVKTYLIGFVLSVILTAIPFYMVMEGDF-SKATTLWSI 59
Query: 54 VLCAIAQIIVHLVFFLHMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
V AI QI VHL +FLH++ E S + +F+ +++ + S+W++Y N MM
Sbjct: 60 VTLAIVQIWVHLKYFLHLNFTTEDGRASTFSFLFSALIIVMVVGLSVWIIYESNAMMM 117
>gi|300722000|ref|YP_003711280.1| cytochrome o ubiquinol oxidase subunit IV [Xenorhabdus nematophila
ATCC 19061]
gi|297628497|emb|CBJ89064.1| cytochrome o ubiquinol oxidase, subunit IV [Xenorhabdus nematophila
ATCC 19061]
Length = 110
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N + + S+G+ K ++GF+LS+ILT+IPF +VM+G I+ T++ A+ Q
Sbjct: 1 MSHPNT-SHSGASHGSFKTYMIGFVLSVILTVIPFWMVMEGTASHSTILL-TVLAMAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VH ++FLHM+T E+ W+++A++FT++++ I VGS+W+MY+LN NMM
Sbjct: 59 IVVHFIYFLHMNTSSEERWNLVALLFTLLVIVIVVVGSLWIMYNLNINMM 108
>gi|27375263|ref|NP_766792.1| cytochrome O ubiquinol oxidase subunit IV [Bradyrhizobium japonicum
USDA 110]
gi|27348399|dbj|BAC45417.1| cytochrome O ubiquinol oxidase subunit IV [Bradyrhizobium japonicum
USDA 110]
Length = 126
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/104 (50%), Positives = 74/104 (71%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
T ++GF+LS++LT IPF +VM G K I L I+ A+ QI+VH+++FLHM+TK
Sbjct: 22 STFSGYMLGFVLSVVLTAIPFWLVMSGTLPSKQITALVIMAFAVVQIVVHMIYFLHMNTK 81
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
E+GWS+MA+IFTI+MV I GS+WVM HLN+NMM + M +
Sbjct: 82 SENGWSMMALIFTIVMVVIALSGSLWVMNHLNSNMMPIHQMSGM 125
>gi|186472798|ref|YP_001860140.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum
STM815]
gi|184195130|gb|ACC73094.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum
STM815]
Length = 114
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
++G+ ++GF+LS+ILT FG+V+ G+ + I + QI+VHLV+
Sbjct: 11 AHADENHGSFGSYMIGFVLSVILTAAAFGVVLAGWATGTQALYA-IAGLGLVQIVVHLVY 69
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM+T W++ A FT++ I G++WVM++++ NMMS
Sbjct: 70 FLHMNTSSGQRWNVTAFAFTVLTAVIVIGGTLWVMHNVSMNMMS 113
>gi|73538718|ref|YP_299085.1| cytochrome C oxidase subunit IV [Ralstonia eutropha JMP134]
gi|72122055|gb|AAZ64241.1| Prokaryotic Cytochrome C oxidase subunit IV [Ralstonia eutropha
JMP134]
Length = 130
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 67/98 (68%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ + + GF+LS+ILT IPF +VM F + + ++ QI+VH+++FLHM+
Sbjct: 29 HISMSGYVTGFVLSVILTTIPFWLVMGKVFEKSSTTAILLLALGAVQIVVHMIYFLHMNA 88
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
K E GW+++A++FT+++V I G++WVM+HLN+NMM
Sbjct: 89 KSEGGWNMLALMFTLVLVVITLSGTLWVMFHLNSNMMP 126
>gi|73538403|ref|YP_298770.1| cytochrome O ubiquinol oxidase subunit IV [Ralstonia eutropha
JMP134]
gi|72121740|gb|AAZ63926.1| cyoD2, RSc1861; probable transmembrane cytochrome O ubiquinol
oxidase (subunit Iv) oxidoreductase protein [Ralstonia
eutropha JMP134]
Length = 131
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72
S+G+ + +GF LSL+LT FG VM G + IV +AQ++V L FFLH+
Sbjct: 22 SHGSPRSYAIGFALSLVLTFASFGAVMSGALPP-GMGLPVIVGLCVAQLLVQLSFFLHLG 80
Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
+ T ++ I GS+WVM++ + NMM +
Sbjct: 81 IGKGQRGNSGIFACTFGLIVIVIAGSLWVMHNADTNMMPTQMT 123
>gi|209518753|ref|ZP_03267568.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. H160]
gi|209500795|gb|EEA00836.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. H160]
Length = 113
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
++ + +G+ GF+LS+ILT+ F IVM G ++ + I A QI
Sbjct: 4 SHNAHGAHSEGGHGSFGSYTAGFVLSVILTVAAFAIVMTGTLTGQSALFA-IAGLAFVQI 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+VHLVFFLHM+T W++ A FT + I G++WVM++++ NMMS
Sbjct: 63 LVHLVFFLHMNTSSSQRWNVTAFAFTALTAVIVIGGTLWVMHNVSMNMMS 112
>gi|299067541|emb|CBJ38741.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia solanacearum
CMR15]
Length = 125
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
+H +G+ + VG +LS+ LT+ F VM G + + + LC +AQ++V L
Sbjct: 9 VHAGETAVHGSLRGYTVGLLLSVALTLAAFATVMTGALPARLALAGMVGLC-VAQLLVQL 67
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEG 114
VFFLH+ + + T +++AI GS+WVM++ N NMM +
Sbjct: 68 VFFLHLGPGPGQRGNTAIFVCTGLLIAIVVAGSLWVMHNANANMMPTDM 116
>gi|53719988|ref|YP_108974.1| putative cytochrome o ubiquinol oxidase protein [Burkholderia
pseudomallei K96243]
gi|53725262|ref|YP_102390.1| ubiquinol oxidase subunit IV [Burkholderia mallei ATCC 23344]
gi|67641797|ref|ZP_00440564.1| ubiquinol oxidase, subunit IV [Burkholderia mallei GB8 horse 4]
gi|76809313|ref|YP_334220.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 1710b]
gi|121598783|ref|YP_993720.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1]
gi|124385820|ref|YP_001028822.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229]
gi|126440812|ref|YP_001059741.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 668]
gi|126450472|ref|YP_001081267.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247]
gi|126454810|ref|YP_001067026.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106a]
gi|134277478|ref|ZP_01764193.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305]
gi|167001101|ref|ZP_02266902.1| ubiquinol oxidase, subunit IV [Burkholderia mallei PRL-20]
gi|167720491|ref|ZP_02403727.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei DM98]
gi|167744575|ref|ZP_02417349.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 14]
gi|167816684|ref|ZP_02448364.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 91]
gi|167846591|ref|ZP_02472099.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei B7210]
gi|167895177|ref|ZP_02482579.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 7894]
gi|167903561|ref|ZP_02490766.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei NCTC
13177]
gi|167911809|ref|ZP_02498900.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 112]
gi|167919811|ref|ZP_02506902.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei BCC215]
gi|217420541|ref|ZP_03452046.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576]
gi|226199882|ref|ZP_03795432.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan
9]
gi|237813135|ref|YP_002897586.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia
pseudomallei MSHR346]
gi|242314110|ref|ZP_04813126.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b]
gi|254178120|ref|ZP_04884775.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399]
gi|254184265|ref|ZP_04890855.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655]
gi|254191300|ref|ZP_04897804.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur
52237]
gi|254195702|ref|ZP_04902128.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13]
gi|254199289|ref|ZP_04905655.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH]
gi|254205599|ref|ZP_04911951.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU]
gi|254258458|ref|ZP_04949512.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a]
gi|254296927|ref|ZP_04964380.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e]
gi|254357761|ref|ZP_04974034.1| ubiquinol oxidase, subunit IV [Burkholderia mallei 2002721280]
gi|52210402|emb|CAH36383.1| putative cytochrome o ubiquinol oxidase protein [Burkholderia
pseudomallei K96243]
gi|52428685|gb|AAU49278.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 23344]
gi|76578766|gb|ABA48241.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710b]
gi|121227593|gb|ABM50111.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1]
gi|124293840|gb|ABN03109.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229]
gi|126220305|gb|ABN83811.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia
pseudomallei 668]
gi|126228452|gb|ABN91992.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106a]
gi|126243342|gb|ABO06435.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247]
gi|134251128|gb|EBA51207.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305]
gi|147748885|gb|EDK55959.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH]
gi|147753042|gb|EDK60107.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU]
gi|148026888|gb|EDK84909.1| ubiquinol oxidase, subunit IV [Burkholderia mallei 2002721280]
gi|157807091|gb|EDO84261.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e]
gi|157938972|gb|EDO94642.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur
52237]
gi|160699159|gb|EDP89129.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399]
gi|169652447|gb|EDS85140.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13]
gi|184214796|gb|EDU11839.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655]
gi|217395953|gb|EEC35970.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576]
gi|225927938|gb|EEH23975.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan
9]
gi|237504955|gb|ACQ97273.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia
pseudomallei MSHR346]
gi|238522785|gb|EEP86227.1| ubiquinol oxidase, subunit IV [Burkholderia mallei GB8 horse 4]
gi|242137349|gb|EES23751.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b]
gi|243063053|gb|EES45239.1| ubiquinol oxidase, subunit IV [Burkholderia mallei PRL-20]
gi|254217147|gb|EET06531.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a]
Length = 110
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + ++GT + GF+LS++LT FG+VM G + + + + A Q
Sbjct: 1 MAHSHP-SHGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAAVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+T W++MA +T++ I G++WVM+++ NMMS
Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTVLTALILIFGTVWVMHNVGMNMMS 109
>gi|83719004|ref|YP_442317.1| ubiquinol oxidase subunit IV [Burkholderia thailandensis E264]
gi|167619297|ref|ZP_02387928.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis Bt4]
gi|257138514|ref|ZP_05586776.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264]
gi|83652829|gb|ABC36892.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264]
Length = 110
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + ++GT + GF+LS++LT FG+VM G + + + + A Q
Sbjct: 1 MAHSHP-THGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAAVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+T W++MA +T + I G++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNTSSSQRWNVMAFSYTALTALILIFGTVWVMHNVSMNMMS 109
>gi|186470621|ref|YP_001861939.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum
STM815]
gi|184196930|gb|ACC74893.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum
STM815]
Length = 125
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + S+G+ K ++G +LSL LT FG+VM + + +V + Q++V L +
Sbjct: 11 HAHDASHGSVKHYVIGMLLSLALTFASFGVVMTHVV-PRAMGLTAVVALCVVQLLVQLRY 69
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
FLH+ + + + + T +++AI GS+WV+++ N NMM +
Sbjct: 70 FLHLGSSADQRSNTGIFVCTALLIAIIVAGSLWVIHNANVNMMPTQ 115
>gi|167581212|ref|ZP_02374086.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis TXDOH]
Length = 108
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
++GT + GF+LS++LT FG+VM G + + + + A QI+VHLV+
Sbjct: 5 THGDEAHGTVGGYIAGFVLSVLLTAASFGLVMGGVLPPREALVS-LAVLAAVQIVVHLVY 63
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM+T W++MA +T++ I G++WVM++++ NMMS
Sbjct: 64 FLHMNTSSSQRWNVMAFSYTVLTALILIFGTVWVMHNVSMNMMS 107
>gi|312961436|ref|ZP_07775939.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens
WH6]
gi|311284331|gb|EFQ62909.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens
WH6]
Length = 112
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
K +IH+ S+G+ + LVGF++S++LT+IPFG+ M + + +V QI
Sbjct: 3 KQSSIHSSAGTSHGSSRSYLVGFVVSVLLTLIPFGLAMFPSL-PRTVTAWLVVALGAIQI 61
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+VHL FFLH+ T E W+++A+IF+ +++ + S+W+M +++NM++
Sbjct: 62 VVHLKFFLHLDTAQEQRWNLIALIFSAVIIVLLVGLSLWIMNSIHHNMLA 111
>gi|149926920|ref|ZP_01915179.1| Prokaryotic Cytochrome C oxidase subunit IV [Limnobacter sp.
MED105]
gi|149824472|gb|EDM83690.1| Prokaryotic Cytochrome C oxidase subunit IV [Limnobacter sp.
MED105]
Length = 133
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/96 (48%), Positives = 69/96 (71%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ + +GF+L++ILT+IPF +VM G F L I+ Q++VH+++FLHM++K
Sbjct: 24 SMRDYTIGFVLAVILTVIPFALVMGGVFESSTTTALVILGLGAVQMVVHMIYFLHMNSKS 83
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
E GWS++AM+FT+I+V I VGS+WVMYHLN NMM
Sbjct: 84 EGGWSMLAMMFTLIIVVITLVGSIWVMYHLNTNMMP 119
>gi|229592521|ref|YP_002874640.1| cytochrome C oxidase (ubiquinol oxidase) subunit IV [Pseudomonas
fluorescens SBW25]
gi|229364387|emb|CAY52169.1| cytochrome C oxidase (ubiquinol oxidase) subunit IV [Pseudomonas
fluorescens SBW25]
Length = 113
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + H+ + S+G+ K +GFILS+ILT+IPFG+VM K+I + ++ A+ Q+
Sbjct: 4 AHSHDHDSHDASHGSVKSYAIGFILSVILTLIPFGLVMYPTL-PKSITLMIVLAFAVIQV 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+VHLV+FLH+ E +++A +F +++ + S+W+M+ ++ MM+
Sbjct: 63 LVHLVYFLHLDRSKEQRDNVIAFVFAGLVILLLVGLSIWIMFSIHTFMMA 112
>gi|242240301|ref|YP_002988482.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech703]
gi|242132358|gb|ACS86660.1| cytochrome o ubiquinol oxidase subunit IV [Dickeya dadantii Ech703]
Length = 110
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 82/110 (74%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H+ + S+G+ K L+GF+LS+ILT+IPF +VM G +I+ LT++ CA+ Q
Sbjct: 1 MSHS-AHDHSGASHGSVKSYLMGFVLSIILTVIPFSMVMNGTTAH-SIILLTVLGCAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH++T E+ W+++A++FT++++AI VGS+W+M ++NMM
Sbjct: 59 ILVHLVYFLHLNTASEERWNVVAIVFTVLIIAIVVVGSIWIMMSAHHNMM 108
>gi|134095867|ref|YP_001100942.1| cytochrome o ubiquinol oxidase subunit IV [Herminiimonas
arsenicoxydans]
gi|133739770|emb|CAL62821.1| Cytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase
chain D) [Herminiimonas arsenicoxydans]
Length = 136
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 67/96 (69%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K +GFILS+ILT IPF +VM D L I+ A QI+VH+++FLHM+TK
Sbjct: 24 SLKSYAIGFILSVILTAIPFWMVMNDVLKDSGTTGLVILGFAAVQIVVHMIYFLHMNTKS 83
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
E GWS++A+IFT+++V I GS+WVMYH+N NMM
Sbjct: 84 EGGWSMLALIFTVVIVVIVLAGSLWVMYHMNTNMMP 119
>gi|150376510|ref|YP_001313106.1| cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium medicae
WSM419]
gi|150031057|gb|ABR63173.1| Cytochrome o ubiquinol oxidase subunit IV [Sinorhizobium medicae
WSM419]
Length = 133
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K + GFILS++LT IPF +VM + I+ QI+VH++FFLHM+T+
Sbjct: 28 TLKSYVTGFILSVLLTAIPFWLVMADVLESAILTAAIIMALGAIQIVVHMIFFLHMNTRS 87
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM--EGMRSI 118
E GW++MA+IFTI++VAI GS+WVM+HLN NMM M E M+++
Sbjct: 88 EGGWTMMALIFTIVLVAIALSGSLWVMHHLNTNMMPMSPEMMKNM 132
>gi|33593868|ref|NP_881512.1| cytochrome 0 ubiquinol oxidase [Bordetella pertussis Tohama I]
gi|33600272|ref|NP_887832.1| cytochrome 0 ubiquinol oxidase [Bordetella bronchiseptica RB50]
gi|33563941|emb|CAE43202.1| cytochrome 0 ubiquinol oxidase [Bordetella pertussis Tohama I]
gi|33567870|emb|CAE31784.1| cytochrome 0 ubiquinol oxidase [Bordetella bronchiseptica RB50]
gi|332383287|gb|AEE68134.1| cytochrome 0 ubiquinol oxidase [Bordetella pertussis CS]
Length = 115
Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 1 MKYD-NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + +G+ K L+GF +SL+LT FG+VM G + I +V+ +A
Sbjct: 1 MSHAVTSEDHGHADHGSLKSYLIGFAISLVLTFGSFGLVMAGTV-PRGIALAGVVVLCVA 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++V LVFFLHM + ++ +FTI+++AI GS+WV++++N NMM
Sbjct: 60 QLLVQLVFFLHMGGSKKQRDNVTTFVFTILIIAIIVGGSVWVLHNMNANMM 110
>gi|170723534|ref|YP_001751222.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida W619]
gi|169761537|gb|ACA74853.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida W619]
Length = 110
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
N H+ + ++G+ K ++GF+LS+ILT IPFG+VM KN+ L +V A+ Q++V
Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFVLSIILTAIPFGLVMYPSL-PKNLTVLIVVAMAVIQVVV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ MM+
Sbjct: 62 HLVYFLHMDRSKEQRSNVSTFLFTTMVIALLVGLSLWIMFSIHYEMMA 109
>gi|307545742|ref|YP_003898221.1| cytochrome O ubiquinol oxidase cyoD [Halomonas elongata DSM 2581]
gi|307217766|emb|CBV43036.1| K02300 cytochrome o ubiquinol oxidase operon protein cyoD
[Halomonas elongata DSM 2581]
Length = 109
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ HS+G+ K +VG ILS++LTIIPFG+VM G F L IV A+AQ++V L+
Sbjct: 6 SHEEHSHGSVKSYVVGLILSIVLTIIPFGVVMTGSF-GTPATVLIIVATAVAQVLVQLIL 64
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
F+HM+TK ++GW+ M+ +FT+ ++ + GS+W+MY+L+ NMM
Sbjct: 65 FMHMNTKADEGWNFMSFVFTVSILVLIIGGSVWIMYNLHQNMM 107
>gi|294012087|ref|YP_003545547.1| cytochrome o ubiquinol oxidase operon protein cyoD [Sphingobium
japonicum UT26S]
gi|292675417|dbj|BAI96935.1| cytochrome o ubiquinol oxidase operon protein cyoD [Sphingobium
japonicum UT26S]
Length = 139
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 3 YDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + H + +G+ ++GF LS ILT IPF +VM G D + + I+ A Q+
Sbjct: 6 HSHDHGHHEEGAHGSFGSYMIGFGLSAILTAIPFWLVMSGALNDPQLTGVVIMGFAAVQV 65
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
+VH+++FLHM+T+VE GWS MAM+ T+++V I GS+WVMYHLN NMM M
Sbjct: 66 VVHMIYFLHMNTRVEGGWSFMAMMLTVVLVVIVLSGSLWVMYHLNANMMPHAQMEM 121
>gi|258541197|ref|YP_003186630.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-01]
gi|256632275|dbj|BAH98250.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-01]
gi|256635332|dbj|BAI01301.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-03]
gi|256638387|dbj|BAI04349.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-07]
gi|256641441|dbj|BAI07396.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-22]
gi|256644496|dbj|BAI10444.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-26]
gi|256647551|dbj|BAI13492.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-32]
gi|256650604|dbj|BAI16538.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256653595|dbj|BAI19522.1| cytochrome o ubiquinol oxidase subunit IV [Acetobacter pasteurianus
IFO 3283-12]
Length = 137
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + S+G+ ++GF+L+++LT++ FG+VM + + A+ Q++VHL +
Sbjct: 34 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMSHSLSPAGTLAA-VSALALVQVLVHLHY 92
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM E W+ M +FT+ VAI VGS+++M + +MMS
Sbjct: 93 FLHMGGDSEQRWNNMCFVFTVAFVAILIVGSVFIMNNTALHMMS 136
>gi|282891622|ref|ZP_06300111.1| hypothetical protein pah_c186o006 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498485|gb|EFB40815.1| hypothetical protein pah_c186o006 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 120
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
++H++ +GT K +GFI S+ILT+I F + + + T+V A+ Q ++
Sbjct: 6 SLHDIQREWHGTLKSYAIGFIGSIILTVISFFMTSAKILSGR-FLAYTLVGLALIQAVIQ 64
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
L +FLH+ + + W + F +++ I +GS+W+MY LN+ +MS M H
Sbjct: 65 LRYFLHLGQETKPRWETIIFYFMFLVLLIIALGSLWIMYDLNDRVMSDIAMGMSH 119
>gi|148253544|ref|YP_001238129.1| cytochrome o ubiquinol oxidase subunit IV [Bradyrhizobium sp.
BTAi1]
gi|146405717|gb|ABQ34223.1| cytochrome bo3 quinol oxidase subunit 4 [Bradyrhizobium sp. BTAi1]
Length = 121
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 54/116 (46%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + H+ GT++ L+GF S++LT IPF +VM G DK L I+ A Q+
Sbjct: 5 AHAHAHDSADAHAGTRQGQLIGFGASVVLTAIPFLLVMHGTL-DKQATALIIMAFAAVQV 63
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
+VH++FFLHM+TK E GW++MA+IFTIIMV I GS+WVM+HL NMM + M
Sbjct: 64 VVHMIFFLHMNTKAEGGWTMMALIFTIIMVVIALSGSLWVMHHLTTNMMPVHEMGQ 119
>gi|194367564|ref|YP_002030174.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas
maltophilia R551-3]
gi|194350368|gb|ACF53491.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas
maltophilia R551-3]
Length = 110
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + +++G+ K L+GF+L +LT++PF +VM + + +V A+AQ
Sbjct: 1 MAHVET-SRAGNAHGSTKSYLIGFVLCALLTVVPFALVMNPVL-SRPLTLFLLVGFAVAQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V LV+FLHM K E GW++ + +FT++++ I S+W+++ ++ +MM
Sbjct: 59 ILVQLVYFLHMDRKSEGGWNLASFVFTLVILFIVVALSVWIIWSMHYHMM 108
>gi|285017726|ref|YP_003375437.1| cytochrome o ubiquinol oxidase subunit iv transmembrane protein
[Xanthomonas albilineans GPE PC73]
gi|283472944|emb|CBA15449.1| probable cytochrome o ubiquinol oxidase subunit iv transmembrane
protein [Xanthomonas albilineans]
Length = 112
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 3 YDNIHNMNMHSYGT-KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + S+G+ K L+GF+L++ILT+IPFG+VM G F K + I + A Q+
Sbjct: 4 HPSSEAHADPSHGSSLKSYLIGFVLAVILTVIPFGMVMSGAF-PKGATVIAIAVMAAVQM 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VHLV+FLHM E ++ +F+++++ I VGS+WV+++LN NMM
Sbjct: 63 LVHLVYFLHMDRSPEQRSNVHVGLFSLLIIGIVVVGSLWVLHNLNVNMM 111
>gi|190576212|ref|YP_001974057.1| putative cytochrome O ubiquinol oxidase subunit IV
[Stenotrophomonas maltophilia K279a]
gi|190014134|emb|CAQ47773.1| putative cytochrome O ubiquinol oxidase subunit IV
[Stenotrophomonas maltophilia K279a]
Length = 110
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + +++G+ K L+GF+L +LT++PF +VM L + + +V A+AQ
Sbjct: 1 MAHVET-SRAGNAHGSTKSYLIGFVLCALLTVVPFALVMN-PLLSRPLTLFLLVGFAVAQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V LV+FLHM K E GW++ + +FT++++ I S+W+++ ++ +MM
Sbjct: 59 ILVQLVYFLHMDRKSEGGWNLASFVFTLVILFIIVALSVWIIWSMHYHMM 108
>gi|33595747|ref|NP_883390.1| cytochrome 0 ubiquinol oxidase [Bordetella parapertussis 12822]
gi|33565826|emb|CAE36371.1| cytochrome 0 ubiquinol oxidase [Bordetella parapertussis]
Length = 115
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 1 MKYD-NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + + ++G+ K L+GF +SL+LT FG+VM G ++I +V+ +A
Sbjct: 1 MSHAVTSEDHGHANHGSLKSYLIGFAISLVLTFGSFGLVMAGTV-PRSIALAGVVVLCVA 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++V LVFFLHM + ++ +FTI+++AI GS+WV++++N NMM
Sbjct: 60 QLLVQLVFFLHMGGSKKQRDNVTTFVFTILIIAIIVGGSVWVLHNMNANMM 110
>gi|295699447|ref|YP_003607340.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1002]
gi|295438660|gb|ADG17829.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1002]
Length = 113
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + +G+ + GF+LS+ILT+ F IVM G + + I A+ QI
Sbjct: 4 SHSAHGAHSEGGHGSFGSYMTGFVLSVILTVAAFAIVMTGTLTGHSALFA-IAGLAVVQI 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+VHLVFFLHM+ W++ A +FT + I G++WVM++++ NMMS
Sbjct: 63 LVHLVFFLHMNASSSQRWNVTAFVFTALTAVIVVGGTLWVMHNVSMNMMS 112
>gi|296156344|ref|ZP_06839183.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. Ch1-1]
gi|295893850|gb|EFG73629.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp. Ch1-1]
Length = 110
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 4 DNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
D+ HN S+G+ VGFILS++LT+ FG+VM G ++ + I A+ QI+
Sbjct: 2 DHSHNAHAGESHGSLGSYTVGFILSVVLTVAAFGLVMTGKLTGEHALFA-IAGLALVQIV 60
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
VHLVFFLHM+T E W++MA FT++ I G++WVM++++ +MMS
Sbjct: 61 VHLVFFLHMNTSSEQRWNVMAFAFTLLTAIIVIGGTLWVMHNVSMHMMS 109
>gi|85058642|ref|YP_454344.1| cytochrome o ubiquinol oxidase subunit IV [Sodalis glossinidius
str. 'morsitans']
gi|84779162|dbj|BAE73939.1| cytochrome o ubiquinol oxidase subunit IV [Sodalis glossinidius
str. 'morsitans']
Length = 110
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + S G+ K L+GFILS+ILT+IPF IVM+G ++++ +V+CA+ Q
Sbjct: 1 MSHASA-GHTGASQGSHKSYLIGFILSIILTVIPFAIVMQGSA-SESMLIAVLVICAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLH+ST E W+++A +F ++++AI VGS+W+M++LN+N+M
Sbjct: 59 IVVHLVYFLHLSTSSEQQWNLIAFVFAVMIIAILVVGSLWIMWYLNHNLM 108
>gi|299065536|emb|CBJ36707.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum
CMR15]
Length = 121
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H + T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VH
Sbjct: 15 HGHATGGAGHATVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMGLAVVQIVVH 73
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
L++FLH+ W++MA +FT++++ I VGS+WVM+++N NMM
Sbjct: 74 LIYFLHLDGSSAQRWNVMAFLFTLLILLIVIVGSLWVMHNMNVNMM 119
>gi|34499448|ref|NP_903663.1| cytochrome o ubiquinol oxidase subunit IV [Chromobacterium
violaceum ATCC 12472]
gi|34105300|gb|AAQ61655.1| cytochrome o ubiquinol oxidase subunit IV [Chromobacterium
violaceum ATCC 12472]
Length = 106
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H + S+GT K +VGF+LS+ILT IPF +VM G F K + I+ A+ QI+V L
Sbjct: 2 SHAHDNASHGTVKSYMVGFVLSVILTAIPFWMVMGGAFT-KQATLIGILAMAVVQIVVQL 60
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+FLH+ E + + +FT +++ + V S+W++Y + MM
Sbjct: 61 KYFLHLDFSKEGKLNTFSFLFTGMVIVLLVVLSIWIIYTADALMM 105
>gi|92113085|ref|YP_573013.1| cytochrome C oxidase subunit IV [Chromohalobacter salexigens DSM
3043]
gi|91796175|gb|ABE58314.1| cytochrome bo3 quinol oxidase subunit 4 [Chromohalobacter
salexigens DSM 3043]
Length = 111
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D + + ++G+ K ++G ILS++LTIIPFG+VM G F + +TI + AI Q++V
Sbjct: 3 DAHTSHDGGNHGSVKSYVIGLILSIVLTIIPFGMVMSGGFE-TMTVVVTISIMAILQVLV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
L+ F+H+ K E+GW+ + IFT +++ I GS+W+M +L+ NMM
Sbjct: 62 QLIMFMHLDFKTEEGWNAGSFIFTALILVILVGGSLWIMQNLHANMM 108
>gi|259909263|ref|YP_002649619.1| Cytochrome o ubiquinol oxidase protein CyoD [Erwinia pyrifoliae
Ep1/96]
gi|224964885|emb|CAX56407.1| Cytochrome o ubiquinol oxidase protein CyoD [Erwinia pyrifoliae
Ep1/96]
gi|283479315|emb|CAY75231.1| Cytochrome o ubiquinol oxidase protein cyoD [Erwinia pyrifoliae DSM
12163]
gi|310766834|gb|ADP11784.1| Cytochrome o ubiquinol oxidase protein CyoD [Erwinia sp. Ejp617]
Length = 109
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + S+G+ K ++GFILS+ILT IPF +VM G K + +++CA+ Q++V
Sbjct: 2 SHPATEHGASHGSVKSYMIGFILSIILTGIPFWMVMDGGA-SKATILTVVLVCAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLH+ +K E GW+++A++F +++ I VGS+W+M++LN NMMS
Sbjct: 61 HLVYFLHLDSKSEGGWNLIAIVFAALIILIVVVGSLWIMWNLNYNMMS 108
>gi|187930227|ref|YP_001900714.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J]
gi|241664394|ref|YP_002982754.1| cytochrome O ubiquinol oxidase subunit IV [Ralstonia pickettii 12D]
gi|309782937|ref|ZP_07677657.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia sp.
5_7_47FAA]
gi|187727117|gb|ACD28282.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12J]
gi|240866421|gb|ACS64082.1| cytochrome o ubiquinol oxidase subunit IV [Ralstonia pickettii 12D]
gi|308918361|gb|EFP64038.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia sp.
5_7_47FAA]
Length = 122
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K L+GF+L++ILT IPF +VM G + + ++ T++ A+ QI+VHL++FLH+
Sbjct: 27 TVKGYLIGFVLAVILTAIPFKMVMDGGYSHQTVLV-TVMALAVVQIVVHLIYFLHLDGSS 85
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
W++MA +FT++++AI VGS+WVM+++N NMM+M
Sbjct: 86 AQRWNVMAFLFTLLILAIVVVGSLWVMHNMNANMMTM 122
>gi|91778473|ref|YP_553681.1| CyoD [Burkholderia xenovorans LB400]
gi|91691133|gb|ABE34331.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia xenovorans
LB400]
Length = 110
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 4 DNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
D+ HN S+G+ GF+LS+ILT+ FG+VM G ++ + I A QI+
Sbjct: 2 DHSHNAHAGESHGSIGSYTAGFVLSVILTVAAFGLVMTGKLTGEHALFA-IAGLAFVQIV 60
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
VHLVFFLHM+T E W++MA FT++ I G++WVM++++ +MMS
Sbjct: 61 VHLVFFLHMNTSSEQRWNVMAFAFTLLTAIIVIGGTLWVMHNVSMHMMS 109
>gi|188534643|ref|YP_001908440.1| Cytochrome o ubiquinol oxidase protein cyoD (Ubiquinol oxidase
chain D) [Erwinia tasmaniensis Et1/99]
gi|292487459|ref|YP_003530331.1| cytochrome o ubiquinol oxidase protein cyoD [Erwinia amylovora
CFBP1430]
gi|292898701|ref|YP_003538070.1| cytochrome O ubiquinol oxidase subunit IV [Erwinia amylovora ATCC
49946]
gi|188029685|emb|CAO97564.1| Cytochrome o ubiquinol oxidase protein cyoD (Ubiquinol oxidase
chain D) [Erwinia tasmaniensis Et1/99]
gi|291198549|emb|CBJ45657.1| cytochrome O ubiquinol oxidase subunit IV [Erwinia amylovora ATCC
49946]
gi|291552878|emb|CBA19923.1| Cytochrome o ubiquinol oxidase protein cyoD [Erwinia amylovora
CFBP1430]
gi|312171563|emb|CBX79821.1| Cytochrome o ubiquinol oxidase protein cyoD [Erwinia amylovora ATCC
BAA-2158]
Length = 109
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + S+G+ K ++GFILS+ILT IPF +VM G K + +++CA+ Q++V
Sbjct: 2 SHPATEHGASHGSVKSYMIGFILSIILTGIPFWMVMDGGA-SKATILAVVLVCAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLH+ +K E GW+++A++F +++ I VGS+W+M++LN NMMS
Sbjct: 61 HLVYFLHLDSKSEGGWNLIAIVFAALIILIVVVGSLWIMWNLNYNMMS 108
>gi|190573374|ref|YP_001971219.1| putative transmembrane quinol oxidase subunit 4 [Stenotrophomonas
maltophilia K279a]
gi|254523523|ref|ZP_05135578.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp.
SKA14]
gi|30351180|gb|AAP22951.1| cytochrome oxidase subunit IV [Rhizobium arachis]
gi|190011296|emb|CAQ44909.1| putative transmembrane quinol oxidase subunit 4 [Stenotrophomonas
maltophilia K279a]
gi|219721114|gb|EED39639.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp.
SKA14]
Length = 113
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H S+GT K L+GF+L+++LT+IPF +VM G F + + + I + A+ Q++
Sbjct: 6 HAHDHGTGGESHGTVKSYLIGFVLAVVLTVIPFWMVMSGDF-SRTVNGVVIAITAVLQML 64
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VHLVFFLH+ E W++ A FT++++ I VG++WVM+++N +MM
Sbjct: 65 VHLVFFLHLDRSSESRWNVNAAAFTVVVIGIIVVGTLWVMHNMNVHMM 112
>gi|119387827|ref|YP_918861.1| cytochrome C oxidase subunit IV [Paracoccus denitrificans PD1222]
gi|461330|emb|CAA55035.1| cytochrome ba(3) [Paracoccus denitrificans]
gi|119378402|gb|ABL73165.1| cytochrome ba3 quinol oxidase subunit 4 [Paracoccus denitrificans
PD1222]
Length = 127
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 72/104 (69%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ + GF+LS+ILT IPFG+VM G F + + +T++ A+ QI+VH+V+FLHM+ K
Sbjct: 20 SHASYIKGFLLSVILTAIPFGLVMAGGFESRALTAVTVIGFAVVQILVHMVYFLHMNGKQ 79
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
E+GW++++ IFT+++V I GS+WVMYH+N NMM +
Sbjct: 80 EEGWTMLSTIFTVVVVVILLAGSLWVMYHMNTNMMPQMDHELMQ 123
>gi|8134389|sp|Q9WWR4|CYOD_PSEPU RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; AltName:
Full=Cytochrome o ubiquinol oxidase subunit IV
gi|4586340|dbj|BAA76359.1| cytochrome o ubiquinol oxidase D [Pseudomonas putida]
Length = 110
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
N H+ + ++G+ K ++GFILS+ILT IPFG+ M KN+ L IV A+ Q++V
Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFILSIILTAIPFGLAMSPSL-PKNLTVLIIVAMAVIQVVV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ M++
Sbjct: 62 HLVYFLHMDRSKEQRNNVWTFLFTTLVIALLVGLSLWIMFSIHFEMLA 109
>gi|152968964|ref|YP_001334073.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206576416|ref|YP_002240092.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella pneumoniae
342]
gi|238893376|ref|YP_002918110.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae
NTUH-K2044]
gi|262042465|ref|ZP_06015624.1| cytochrome o ubiquinol oxidase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288936842|ref|YP_003440901.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella variicola
At-22]
gi|330011525|ref|ZP_08307111.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella sp. MS 92-3]
gi|150953813|gb|ABR75843.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206565474|gb|ACI07250.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella pneumoniae
342]
gi|238545692|dbj|BAH62043.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259040169|gb|EEW41281.1| cytochrome o ubiquinol oxidase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288891551|gb|ADC59869.1| cytochrome o ubiquinol oxidase subunit IV [Klebsiella variicola
At-22]
gi|328534142|gb|EGF60777.1| cytochrome o ubiquinol oxidase, subunit IV [Klebsiella sp. MS 92-3]
Length = 109
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/110 (47%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H + S+G+ K + GFILS+ILT+IPF +VM G ++ TI++ A+ Q
Sbjct: 1 MSHSTDH--SGASHGSVKSYMTGFILSIILTVIPFAMVMSGSA-SHAVILGTILVTAVVQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHLV+FLHM++K ++GW++ A IFT+I++AI VGS+W+M++LN NMM
Sbjct: 58 IVVHLVYFLHMNSKSDEGWNLTAFIFTVIIIAIVVVGSIWIMWNLNYNMM 107
>gi|70732058|ref|YP_261814.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas fluorescens
Pf-5]
gi|68346357|gb|AAY93963.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas fluorescens
Pf-5]
Length = 112
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+G+++ LVGF LSL+LT+IPF +VM +N+ +V + QI+VHL +FLH+ T
Sbjct: 15 HGSRRSYLVGFALSLVLTLIPFALVMYPSL-PRNVTLWAVVGLGMIQILVHLRYFLHLDT 73
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
E W++ A+IF+ +++ + S+W+M +++NM++
Sbjct: 74 ATEQRWNLTALIFSAVVIFLLVGLSLWIMNSIHHNMLA 111
>gi|194364921|ref|YP_002027531.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas
maltophilia R551-3]
gi|194347725|gb|ACF50848.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas
maltophilia R551-3]
Length = 113
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H S+G+ K L+GF+L+++LT+IPF +VM G F + + + I + A+ Q++
Sbjct: 6 HAHDHAAGGESHGSVKSYLIGFVLAVVLTVIPFWMVMSGDF-SRTVNGVVIAITAVLQML 64
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VHLVFFLH+ E W++ A FT++++ I VG++WVM+++N +MM
Sbjct: 65 VHLVFFLHLDRSSESRWNVNAAAFTVVVIGIIVVGTLWVMHNMNVHMM 112
>gi|301058564|ref|ZP_07199569.1| cytochrome o ubiquinol oxidase, subunit IV [delta proteobacterium
NaphS2]
gi|300447296|gb|EFK11056.1| cytochrome o ubiquinol oxidase, subunit IV [delta proteobacterium
NaphS2]
Length = 109
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + G+ + + GF+LS++LT+IPF +VM G ++++ I I QI +HL +
Sbjct: 7 DSSGAGRGSLRTYISGFVLSVVLTVIPFALVMGGGV-PRSVVIWGICGAGIVQIFIHLHY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
FLH+ T W++MA++FT++++ I G++WVM LN+ MM
Sbjct: 66 FLHLDTSSAARWNVMALVFTLLIIFIFVGGTVWVMVTLNSRMM 108
>gi|161524385|ref|YP_001579397.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia multivorans
ATCC 17616]
gi|189350860|ref|YP_001946488.1| cytochrome o ubiquinol oxidase protein [Burkholderia multivorans
ATCC 17616]
gi|221198370|ref|ZP_03571416.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2M]
gi|221208953|ref|ZP_03581950.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2]
gi|221215750|ref|ZP_03588710.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD1]
gi|160341814|gb|ABX14900.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia multivorans
ATCC 17616]
gi|189334882|dbj|BAG43952.1| cytochrome o ubiquinol oxidase protein [Burkholderia multivorans
ATCC 17616]
gi|221164362|gb|EED96848.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD1]
gi|221171236|gb|EEE03686.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2]
gi|221182302|gb|EEE14703.1| ubiquinol oxidase, subunit IV [Burkholderia multivorans CGD2M]
Length = 110
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + + + A Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGSYVAGFILSVLLTAASFGLVMGGVLSPHASLVA-LAVLAFVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|262396851|ref|YP_003288704.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio sp. Ex25]
gi|262340445|gb|ACY54239.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio sp. Ex25]
Length = 103
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M+ H + + GFI SLILT+IPF V D + CA+ QI VH +F
Sbjct: 1 MDQHVETSASDYVKGFIASLILTVIPFYFVWTKSLPD-TTTYAILFGCALVQIFVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM TK + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMETKTSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101
>gi|77361151|ref|YP_340726.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D)
[Pseudoalteromonas haloplanktis TAC125]
gi|76876062|emb|CAI87284.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D)
[Pseudoalteromonas haloplanktis TAC125]
Length = 119
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 1 MKYDNIHN--------MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLT 52
M + H + S+G+ K L+GF+LS+ILT IPF +VM G F K +
Sbjct: 1 MSHSETHALKQMQNEHHHDESHGSVKSYLIGFVLSVILTAIPFYMVMSGDF-SKATTLYS 59
Query: 53 IVLCAIAQIIVHLVFFLHMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+ A+ QI VHL +FLH++ E S + +F+ +++ + S+W++Y N MM
Sbjct: 60 IITLAVVQIWVHLKYFLHLNFITEDGRASTFSFLFSALIIVMVVGLSVWIIYESNAMMM 118
>gi|315125955|ref|YP_004067958.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D)
[Pseudoalteromonas sp. SM9913]
gi|315014469|gb|ADT67807.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D)
[Pseudoalteromonas sp. SM9913]
Length = 118
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 1 MKYDNIHN-------MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI 53
M + H + S+G+ K L+GF+LS+ILT IPF +VM+G F K +I
Sbjct: 1 MSHSETHALAQMQSQHHDQSHGSVKTYLIGFVLSVILTAIPFWMVMEGDF-SKVTTLWSI 59
Query: 54 VLCAIAQIIVHLVFFLHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
V AI QI VHL +FLH++ E + +F+ +++ + S+W++Y N MM
Sbjct: 60 VTFAIVQIWVHLKYFLHLNFTTDEGKANTFTFLFSALIIVMVVGLSVWIIYESNAMMM 117
>gi|107028752|ref|YP_625847.1| cytochrome C oxidase subunit IV [Burkholderia cenocepacia AU 1054]
gi|116690089|ref|YP_835712.1| cytochrome C oxidase subunit IV [Burkholderia cenocepacia HI2424]
gi|170733423|ref|YP_001765370.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia cenocepacia
MC0-3]
gi|206560505|ref|YP_002231269.1| cytochrome O ubiquinol oxidase protein [Burkholderia cenocepacia
J2315]
gi|254247836|ref|ZP_04941157.1| Heme/copper-type cytochrome/quinol oxidase [Burkholderia
cenocepacia PC184]
gi|105897916|gb|ABF80874.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia cenocepacia
AU 1054]
gi|116648178|gb|ABK08819.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia cenocepacia
HI2424]
gi|124872612|gb|EAY64328.1| Heme/copper-type cytochrome/quinol oxidase [Burkholderia
cenocepacia PC184]
gi|169816665|gb|ACA91248.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia cenocepacia
MC0-3]
gi|198036546|emb|CAR52443.1| cytochrome O ubiquinol oxidase protein [Burkholderia cenocepacia
J2315]
Length = 110
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + + + A Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIG-LAVLAFVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAIVIVGTLWVMHNVSMNMMS 109
>gi|91225752|ref|ZP_01260781.1| hypothetical protein V12G01_07168 [Vibrio alginolyticus 12G01]
gi|91189641|gb|EAS75916.1| hypothetical protein V12G01_07168 [Vibrio alginolyticus 12G01]
Length = 103
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M+ H + + GFI SLILT+IPF V D + CA+ QI VH +F
Sbjct: 1 MDQHVETSSSDYVKGFIASLILTVIPFYFVWTKSLPD-TTTYAILFGCALVQIFVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM TK + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMETKTSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101
>gi|325522318|gb|EGD00930.1| ubiquinol oxidase, subunit IV [Burkholderia sp. TJI49]
Length = 110
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + + + A Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLVA-LAVLAFVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|291616541|ref|YP_003519283.1| CyoD [Pantoea ananatis LMG 20103]
gi|291151571|gb|ADD76155.1| CyoD [Pantoea ananatis LMG 20103]
gi|327392972|dbj|BAK10394.1| cytochrome o ubiquinol oxidase protein CyoD [Pantoea ananatis
AJ13355]
Length = 109
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ N + S+G+ K ++GFILS+ILT IPF +VM G I+ + +V + ++V
Sbjct: 2 SHSVNEHGASHGSVKSYMIGFILSIILTGIPFWMVMDGSASHGTILGVVLVCAVVQ-VLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLH+ +K E GW+++A++F+ I++ I VGS+W+M++LN NMM
Sbjct: 61 HLVYFLHLDSKSEGGWNMVAIVFSAIIILIVVVGSLWIMWNLNYNMMP 108
>gi|254428964|ref|ZP_05042671.1| cytochrome o ubiquinol oxidase subunit IV [Alcanivorax sp. DG881]
gi|196195133|gb|EDX90092.1| cytochrome o ubiquinol oxidase subunit IV [Alcanivorax sp. DG881]
Length = 118
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K+ GF+L++ILT+IPF +VM + I+ A+ QI+VH+VFFLHM+
Sbjct: 19 SLKEYATGFVLAVILTVIPFWLVMGDVLESSTTTVMVILGFALVQIVVHMVFFLHMNFHS 78
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
E GW+++A+IFT+I+V I GS+WVM++LN NMM
Sbjct: 79 EGGWNMLALIFTLILVFITLAGSLWVMHNLNVNMMP 114
>gi|78066842|ref|YP_369611.1| cytochrome C oxidase subunit IV [Burkholderia sp. 383]
gi|77967587|gb|ABB08967.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia sp. 383]
Length = 110
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + + + A Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIA-LAVLAFVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|46446826|ref|YP_008191.1| putative cytochrome O ubiquinol oxidase chain IV cyoD [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400467|emb|CAF23916.1| putative cytochrome O ubiquinol oxidase chain IV cyoD [Candidatus
Protochlamydia amoebophila UWE25]
Length = 120
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 1 MKYD-NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M ++ N+ ++ +GT K ++GF SLILT++ F V ++++ I A+
Sbjct: 1 MCHELNLDDVKKEWHGTIKSYVIGFTASLILTLLSFSFVFFKILKGQDLVYTLI-GFALT 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
Q V LVFFLH+ + + W +A+ FTI+++ I +GS+W+M+ LN MM H
Sbjct: 60 QTFVQLVFFLHIGQEPKPRWESIALGFTILILLIVVIGSLWIMHDLNERMMGYMTQEMTH 119
>gi|221067298|ref|ZP_03543403.1| cytochrome o ubiquinol oxidase subunit IV [Comamonas testosteroni
KF-1]
gi|220712321|gb|EED67689.1| cytochrome o ubiquinol oxidase subunit IV [Comamonas testosteroni
KF-1]
Length = 141
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 67/103 (65%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + GFIL++ILT IPF +VM D+ + L A+ Q++VH+V+FLHM+ K+
Sbjct: 22 TMGDYVKGFILAVILTAIPFYLVMNNVITDRTTAVAVLGLFAVIQVLVHMVYFLHMNGKI 81
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
+ GW++++ IFT+I +AI G++WVM+H+N NMM M
Sbjct: 82 QGGWTMLSTIFTVIFLAIAISGTLWVMFHMNTNMMPGHEMHQA 124
>gi|254524619|ref|ZP_05136674.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp.
SKA14]
gi|219722210|gb|EED40735.1| cytochrome o ubiquinol oxidase subunit IV [Stenotrophomonas sp.
SKA14]
Length = 110
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + +++G+ L+GF+L +LT++PF +VM + + +V A+AQ
Sbjct: 1 MAHVET-SRAGNAHGSTTSYLIGFVLCALLTVVPFALVMNPVL-SRPLTLFLLVGFAVAQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+V LV+FLHM K E GW++ + +FT++++ I S+W+++ ++ +MM
Sbjct: 59 ILVQLVYFLHMDRKSEGGWNLASFVFTLVILFIVVALSVWIIWSMHYHMM 108
>gi|104780180|ref|YP_606678.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas entomophila
L48]
gi|95109167|emb|CAK13864.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas entomophila
L48]
Length = 110
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/104 (35%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ ++G+ K ++GF+LS+ILT IPFG+VM KN+ L +V A+ Q++VHLV+
Sbjct: 7 THHEGNHGSVKSYMIGFVLSIILTAIPFGLVMFPSL-PKNLTVLVVVAMAVIQVVVHLVY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM E ++ +FT++++A+ S+W+M+ ++ M++
Sbjct: 66 FLHMDRSKEQRSNVSTFLFTVLVIALLVGLSLWIMFSIHFEMLA 109
>gi|92118914|ref|YP_578643.1| cytochrome C oxidase subunit IV [Nitrobacter hamburgensis X14]
gi|91801808|gb|ABE64183.1| cytochrome bo3 quinol oxidase subunit 4 [Nitrobacter hamburgensis
X14]
Length = 113
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K L+G +L+L LT IPFG+V + I + AIAQ++VHL +FLH+ K
Sbjct: 20 TIKSYLIGVVLALALTAIPFGLVAAHTLPPIQ-TFVIIGVAAIAQVVVHLRYFLHLDFKP 78
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
++A+ F +++ I G++W+M+ M
Sbjct: 79 SSQNKLVALCFAAVVLLILVGGTLWIMFDRYYRM 112
>gi|222111442|ref|YP_002553706.1| cytochrome o ubiquinol oxidase subunit Iv [Acidovorax ebreus TPSY]
gi|221730886|gb|ACM33706.1| cytochrome o ubiquinol oxidase subunit IV [Acidovorax ebreus TPSY]
Length = 139
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 70/103 (67%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
TK + GFIL++ILT+IPF +VM ++ L + + A+ Q++VH+V+FLHM+ K+
Sbjct: 23 TKGDYVKGFILAVILTVIPFWLVMADVIQNRTTAVLVLGIFAMVQVVVHMVYFLHMNGKI 82
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
+ GW++++ IFTI+ +A+ +G++WVM+H+N NMM
Sbjct: 83 QGGWTMLSTIFTIVFLAVTIIGTLWVMFHMNANMMPAHANPMA 125
>gi|26987551|ref|NP_742976.1| cytochrome o ubiquinol oxidase, protein CyoD [Pseudomonas putida
KT2440]
gi|148546082|ref|YP_001266184.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida F1]
gi|325275995|ref|ZP_08141820.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas sp. TJI-51]
gi|24982224|gb|AAN66440.1|AE016273_9 cytochrome o ubiquinol oxidase, protein CyoD [Pseudomonas putida
KT2440]
gi|18149144|dbj|BAB83596.1| cytochrome o oxidase D [Pseudomonas putida]
gi|42795026|gb|AAS45859.1| CyoD [Pseudomonas putida]
gi|148510140|gb|ABQ77000.1| Cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida F1]
gi|313497178|gb|ADR58544.1| CyoD [Pseudomonas putida BIRD-1]
gi|324098876|gb|EGB96897.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas sp. TJI-51]
Length = 110
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
N H+ + ++G+ K ++GF+LS+ILT IPFG+ M KN+ L IV A+ Q++V
Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFVLSIILTAIPFGLAMTASL-PKNLTVLIIVAMAVIQVVV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ M++
Sbjct: 62 HLVYFLHMDRSKEQRNNVSTFLFTTLVIALLVGLSLWIMFSIHFEMLA 109
>gi|317047167|ref|YP_004114815.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. At-9b]
gi|316948784|gb|ADU68259.1| cytochrome o ubiquinol oxidase subunit IV [Pantoea sp. At-9b]
Length = 109
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ + S+G+ K ++GFILS+ILT IPF +VM G K + +++CA+ Q++V
Sbjct: 2 SHSATEHGASHGSVKSYMIGFILSIILTAIPFWMVMDGSA-SKGTILAVVLVCAVVQVLV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HLV+FLH+ +K E GW+++A++F +++ I VGS+W+M++LN NMM
Sbjct: 61 HLVYFLHLDSKSEGGWNMVAIVFAAVIILIVVVGSLWIMWNLNYNMM 107
>gi|83747511|ref|ZP_00944549.1| CyoD [Ralstonia solanacearum UW551]
gi|83725825|gb|EAP72965.1| CyoD [Ralstonia solanacearum UW551]
Length = 122
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+
Sbjct: 27 SVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMALAVVQIVVHLIYFLHLDGSS 85
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
W++MA +FT++++AI VGS+WVM+++N NMM
Sbjct: 86 AQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 120
>gi|264678283|ref|YP_003278190.1| cytochrome C oxidase subunit IV [Comamonas testosteroni CNB-2]
gi|299532079|ref|ZP_07045473.1| cytochrome C oxidase subunit IV [Comamonas testosteroni S44]
gi|262208796|gb|ACY32894.1| cytochrome C oxidase subunit IV [Comamonas testosteroni CNB-2]
gi|298719741|gb|EFI60704.1| cytochrome C oxidase subunit IV [Comamonas testosteroni S44]
Length = 141
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/103 (42%), Positives = 67/103 (65%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + GFIL++ILT IPF +VM D+ + L A+ Q+IVH+V+FLHM+ K+
Sbjct: 22 TMGDYVKGFILAVILTAIPFYLVMNNIITDRTTAVAVLGLFAVIQVIVHMVYFLHMNGKI 81
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
+ GW++++ IFT+I +AI G++WVM+H+N NMM M
Sbjct: 82 QGGWTMLSTIFTVIFLAIAISGTLWVMFHMNTNMMPGHEMHQA 124
>gi|283850557|ref|ZP_06367845.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio sp.
FW1012B]
gi|283574128|gb|EFC22100.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio sp.
FW1012B]
Length = 107
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
G+ + VGF+LS++LT+IPF +VM G + AI QI+V L +FLH
Sbjct: 10 AAGTGSVRSYTVGFVLSVVLTVIPFALVMSGALSPSA-TVFCVFAAAIVQIVVQLHYFLH 68
Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+ T W++++++FT++++ + GS+WVMY L+ M
Sbjct: 69 LDTSSGMHWNLLSLVFTVLIMTLFIGGSIWVMYSLHYRM 107
>gi|123443352|ref|YP_001007326.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122090313|emb|CAL13179.1| cytochrome O ubiquinol oxidase subunit CyoD [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 95
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K L+GFILS+ILT+IPF +VM G + T+V A+ QIIVHLV+FLHM+ E
Sbjct: 1 MKSYLIGFILSVILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSE 59
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W+++A +FT +++AI VGS+W+MY+LN NMM
Sbjct: 60 ERWNLVAFLFTAMIIAIVVVGSLWIMYNLNINMM 93
>gi|121595099|ref|YP_986995.1| cytochrome C oxidase subunit IV [Acidovorax sp. JS42]
gi|120607179|gb|ABM42919.1| cytochrome bo3 quinol oxidase subunit 4 [Acidovorax sp. JS42]
Length = 142
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 72/105 (68%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ TK + GFIL++ILT+IPF +VM +++ L + + A+ Q++VH+V+FLHM+
Sbjct: 24 HVTKGDYVKGFILAVILTVIPFALVMGDVIQNRSTAVLVLGIFAMVQVVVHMVYFLHMNG 83
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSI 118
K++ GW++++ IFTI+ +A+ +G++WVM+H+N NMM
Sbjct: 84 KIQGGWTMLSTIFTIVFLAVTIIGTLWVMFHMNANMMPAHANPMA 128
>gi|300702890|ref|YP_003744491.1| cytochrome o ubiquinol oxidase, subunit iv [Ralstonia solanacearum
CFBP2957]
gi|299070552|emb|CBJ41847.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum
CFBP2957]
Length = 122
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/95 (45%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+
Sbjct: 27 TVKGYLIGFVLAVILTVIPFKMVMGGGFSHDTVLV-TVMALAVVQIVVHLIYFLHLDGSS 85
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
W++MA +FT++++AI VGS+WVM+++N NMM
Sbjct: 86 AQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 120
>gi|167589186|ref|ZP_02381574.1| Cytochrome C oxidase subunit IV [Burkholderia ubonensis Bu]
Length = 110
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+V+ G + + + A+ Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYIAGFILSVLLTAASFGLVLGGVQSPHASLIA-LAVLALVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM++ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNSSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|239995160|ref|ZP_04715684.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D)
[Alteromonas macleodii ATCC 27126]
gi|332143297|ref|YP_004429035.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D)
[Alteromonas macleodii str. 'Deep ecotype']
gi|327553319|gb|AEB00038.1| cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D)
[Alteromonas macleodii str. 'Deep ecotype']
Length = 123
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + + + ++G K ++GFILS++LT IPF +VM G K ++V + QI
Sbjct: 15 HASSTHNSDDAHGDVKSYIIGFILSVVLTAIPFTLVMNGDL-SKVTTIWSVVTLGLVQIW 73
Query: 63 VHLVFFLHMST-KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VHL +FLH++ E + + +F+ +++ + S+W++Y N MM
Sbjct: 74 VHLKYFLHLNFVTEEGRANTFSFLFSALIIFMVVGLSVWIIYESNAMMM 122
>gi|332992078|gb|AEF02133.1| cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D)
[Alteromonas sp. SN2]
Length = 130
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
+ +G+ K L+GF+LS+ILT+IPF +VM+G F K +IV+ A+ QI VHL +FL
Sbjct: 29 HAAEHGSVKTYLIGFVLSVILTLIPFVMVMEGDF-SKVTTLWSIVVFALVQIWVHLKYFL 87
Query: 70 HMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
H++ E S ++ +F+ +++ + S+W++Y N MM
Sbjct: 88 HLNFVTEDGRASTISFLFSALIIFMVVGLSIWIIYESNAMMM 129
>gi|296115138|ref|ZP_06833779.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter
hansenii ATCC 23769]
gi|295978239|gb|EFG84976.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter
hansenii ATCC 23769]
Length = 110
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D + S+G+ L GF++S++LT FG+VM F M I L A+ QI+V
Sbjct: 3 DAHTSSAGESHGSVGSYLTGFVISVLLTAAAFGLVMAHTFSPSGTMGA-ITLLAVVQIVV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HL+FFLHM+ E W+IMA FT++ V I G++++M+ + NMMS
Sbjct: 62 HLIFFLHMNGSSEQRWNIMAFAFTVVTVLILVGGTIFIMHDTSINMMS 109
>gi|66044395|ref|YP_234236.1| cytochrome C oxidase subunit IV [Pseudomonas syringae pv. syringae
B728a]
gi|63255102|gb|AAY36198.1| Prokaryotic Cytochrome C oxidase subunit IV [Pseudomonas syringae
pv. syringae B728a]
gi|330969178|gb|EGH69244.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 110
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
++ H+ +S+G+ K ++GF+LS+ILT IPF +VM K++ +++ AI QI+V
Sbjct: 3 NSHHSAEDNSHGSVKSYVIGFVLSIILTAIPFALVMSPSL-PKDMTIAIVLVFAIIQILV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HL +FLH+ ++MA FT +++ + S+W+++ ++ MM+
Sbjct: 62 HLHYFLHLDFTSVQRNNVMAFAFTTMVIVLLVGLSLWIIFSVHREMMA 109
>gi|238750997|ref|ZP_04612493.1| hypothetical protein yrohd0001_1290 [Yersinia rohdei ATCC 43380]
gi|238765442|ref|ZP_04626363.1| hypothetical protein ykris0001_44090 [Yersinia kristensenii ATCC
33638]
gi|238696336|gb|EEP89132.1| hypothetical protein ykris0001_44090 [Yersinia kristensenii ATCC
33638]
gi|238710687|gb|EEQ02909.1| hypothetical protein yrohd0001_1290 [Yersinia rohdei ATCC 43380]
Length = 95
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++GFILS+ILT+IPF +VM G + T+V A+ QIIVHLV+FLHM+ E
Sbjct: 1 MKSYIIGFILSVILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSE 59
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W+++A +FT +++AI VGS+W+MY+LN NMM
Sbjct: 60 ERWNLVAFLFTAMIIAIVVVGSLWIMYNLNINMM 93
>gi|71733637|ref|YP_273479.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|237799927|ref|ZP_04588388.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|257487314|ref|ZP_05641355.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289623938|ref|ZP_06456892.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289646772|ref|ZP_06478115.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
aesculi str. 2250]
gi|289678123|ref|ZP_06499013.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
syringae FF5]
gi|298485880|ref|ZP_07003956.1| Cytochrome O ubiquinol oxidase subunit IV [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|302186053|ref|ZP_07262726.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
syringae 642]
gi|71554190|gb|AAZ33401.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|298159569|gb|EFI00614.1| Cytochrome O ubiquinol oxidase subunit IV [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|320323022|gb|EFW79112.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329855|gb|EFW85843.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330870268|gb|EGH04977.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330874428|gb|EGH08577.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330890459|gb|EGH23120.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
mori str. 301020]
gi|330895789|gb|EGH28078.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330939016|gb|EGH42488.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330975784|gb|EGH75850.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330988098|gb|EGH86201.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009080|gb|EGH89136.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331022782|gb|EGI02839.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 110
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
++ H+ +S+G+ K ++GF+LS+ILT IPF +VM K++ +++ AI QI+V
Sbjct: 3 NSHHSAEDNSHGSVKSYIIGFVLSIILTAIPFALVMSPSL-PKDMTIAIVLVFAIIQILV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HL +FLH+ ++MA FT +++ + S+W+++ ++ MM+
Sbjct: 62 HLHYFLHLDFTSVQRNNVMAFAFTTMVIVLLVGLSLWIIFSVHREMMA 109
>gi|167031867|ref|YP_001667098.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida GB-1]
gi|166858355|gb|ABY96762.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas putida GB-1]
Length = 110
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 5 NIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
N H+ + ++G+ K ++GF+LS+ILT IPFG+ M KN+ L IV A+ Q++V
Sbjct: 3 NAHDTHHEGNHGSVKSYMIGFVLSIILTAIPFGLAMTASL-PKNLTVLIIVAMAVIQVVV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLHM E ++ +FT +++A+ S+W+M+ ++ M++
Sbjct: 62 HLVYFLHMDRSKEQRNNVSTFLFTTMVIALLVGLSLWIMFSIHFEMLA 109
>gi|297620726|ref|YP_003708863.1| putative cytochrome o ubiquinol oxidase, subunit IV [Waddlia
chondrophila WSU 86-1044]
gi|297376027|gb|ADI37857.1| putative cytochrome o ubiquinol oxidase, subunit IV [Waddlia
chondrophila WSU 86-1044]
Length = 121
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS 72
+GT +GF +SL+ T I F +V F + + TI A Q +V L+FFLH+
Sbjct: 14 WHGTYLSYGIGFFVSLVFTSISFLLVAYDAFPPVS-LIYTIATLAFLQAVVQLIFFLHLG 72
Query: 73 TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
+ + W F ++++ I VGS+WVM LN MM M + H
Sbjct: 73 QEGKPHWETFIFFFMLLILLIIVVGSLWVMNDLNERMMPKHNMTAAH 119
>gi|207721795|ref|YP_002252233.1| transmembrane cytochrome o ubiquinol oxidase (subunit iv) protein
[Ralstonia solanacearum MolK2]
gi|206586959|emb|CAQ17543.1| transmembrane cytochrome o ubiquinol oxidase (subunit iv) protein
[Ralstonia solanacearum MolK2]
Length = 123
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+
Sbjct: 28 SVKGYLIGFVLAVILTVIPFKMVMSGGFSHDTVLV-TVMALAVVQIVVHLIYFLHLDGSS 86
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
W++MA +FT++++AI VGS+WVM+++N NMM
Sbjct: 87 AQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 121
>gi|117922465|ref|YP_871657.1| cytochrome C oxidase subunit IV [Shewanella sp. ANA-3]
gi|117614797|gb|ABK50251.1| cytochrome C oxidase subunit IV [Shewanella sp. ANA-3]
Length = 113
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+D+ H + + + K LVGF+LS++LT IPF VM F + + IV A+ QI
Sbjct: 7 SHDHSHGADDLA-ASIKSYLVGFVLSVVLTAIPFWAVMTHHFEQSTTLAIVIVT-ALVQI 64
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VHL +FLH+ E + + +FT +++ + S+W++ N MM
Sbjct: 65 LVHLKYFLHLDFSKEGKINTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|90409892|ref|ZP_01217909.1| hypothetical protein P3TCK_03976 [Photobacterium profundum 3TCK]
gi|90329245|gb|EAS45502.1| hypothetical protein P3TCK_03976 [Photobacterium profundum 3TCK]
Length = 103
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
N H+ + GFI SL+LTIIPF L + + + CAI Q++VHLV+F
Sbjct: 2 SNQHAQSSMNGYTKGFIGSLVLTIIPFYFAATK-MLPHAVTLVILFACAIVQVVVHLVYF 60
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LHM + W++++++FT I+V I GS+W+M++LN+NMM
Sbjct: 61 LHMDRSEKGQWNLLSLVFTGIVVFILIAGSLWIMWNLNHNMM 102
>gi|187919715|ref|YP_001888746.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia
phytofirmans PsJN]
gi|187718153|gb|ACD19376.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia
phytofirmans PsJN]
Length = 110
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 4 DNIHN-MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
D+ HN S+G+ GFILS++LT+ FG+VM G +N + L + QI+
Sbjct: 2 DHSHNAHAGESHGSIGSYTTGFILSVVLTVAAFGLVMTGTLTGENALLAIAGLA-LVQIV 60
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
VHL+FFLH++T E W++MA FT++ I G++WVM++++ +MMS
Sbjct: 61 VHLIFFLHLNTSSEQRWNVMAFAFTLLTAVIVIGGTLWVMHNVSMHMMS 109
>gi|170745536|ref|YP_001766993.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
radiotolerans JCM 2831]
gi|170659137|gb|ACB28191.1| cytochrome o ubiquinol oxidase subunit IV [Methylobacterium
radiotolerans JCM 2831]
Length = 182
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ L+G L+ +LT+ F +V F + IV AIAQ+ VHLVFFLH++T
Sbjct: 65 GIRGYLIGLALATLLTVCSFAVVHAKFVWAPAVPVAVIV-FAIAQMGVHLVFFLHITTGP 123
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++ ++MA+ F ++ V + GS+W+M ++N+NMM
Sbjct: 124 DNINNVMALAFGVLFVVLLIGGSVWIMSNMNSNMMP 159
>gi|260778346|ref|ZP_05887239.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio coralliilyticus
ATCC BAA-450]
gi|260606359|gb|EEX32644.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio coralliilyticus
ATCC BAA-450]
Length = 103
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M+ H + GF+ SLILT+IPF V D + + CA+ QI VH +F
Sbjct: 1 MDQHLETGASDYVKGFVASLILTVIPFYFVWTQSLPD-TTTYVLLFGCALVQIFVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEVKTSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101
>gi|212634274|ref|YP_002310799.1| Quinol oxidase subunit V [Shewanella piezotolerans WP3]
gi|212555758|gb|ACJ28212.1| Quinol oxidase subunit V [Shewanella piezotolerans WP3]
Length = 111
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K LVGF+LS++LT IPF VM F K + ++ A+ QI+VHL +FLH+ E
Sbjct: 19 VKSYLVGFMLSVVLTAIPFWAVMSHHFE-KPLTIALVLGSAVVQIVVHLKYFLHLDFSKE 77
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ + +FT +++ + S+W++Y N MM
Sbjct: 78 GKLNTFSFLFTALIIVMVVGLSVWIIYAANALMM 111
>gi|49474943|ref|YP_032984.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella henselae str.
Houston-1]
gi|49237748|emb|CAF26940.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella henselae str.
Houston-1]
Length = 228
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQ 60
++ HN + LVGFIL++ T+ F VM G I + + AI Q
Sbjct: 4 HNETHNPSTS------SYLVGFILAVFFTLGSFIPVMYGMMDSWAISTKVVYLIGMAIIQ 57
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
IIV ++FFLH+++ + W++ A+ F I V + G+ W + HLN NMM
Sbjct: 58 IIVQIIFFLHLNSGPDAKWNLSALWFAAICVFVIIGGTWWAISHLNYNMM 107
>gi|217422660|ref|ZP_03454163.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576]
gi|217394891|gb|EEC34910.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 576]
Length = 107
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + ++GT L GFILS++LT FG+V+ G + + + A QI+VHLV+
Sbjct: 4 SHDGEAHGTVGGYLAGFILSVLLTAASFGLVLSGALSSHASLIA-LAVLAFVQIVVHLVY 62
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM+ W++MA +T++ AI VG++WVM+++ NMMS
Sbjct: 63 FLHMNGSSSQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 106
>gi|53716518|ref|YP_105024.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 23344]
gi|53722915|ref|YP_111900.1| cytochrome O ubiquinol oxidase protein [Burkholderia pseudomallei
K96243]
gi|67641747|ref|ZP_00440515.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei GB8
horse 4]
gi|76817781|ref|YP_336148.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 1710b]
gi|121597003|ref|YP_990968.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1]
gi|124382029|ref|YP_001025369.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10229]
gi|126445034|ref|YP_001063705.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 668]
gi|126446731|ref|YP_001077433.1| ubiquinol oxidase, subunit IV [Burkholderia mallei NCTC 10247]
gi|126456685|ref|YP_001076599.1| ubiquinol oxidase subunit IV [Burkholderia pseudomallei 1106a]
gi|134278624|ref|ZP_01765338.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305]
gi|226195663|ref|ZP_03791250.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan
9]
gi|237510118|ref|ZP_04522833.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia
pseudomallei MSHR346]
gi|242313191|ref|ZP_04812208.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b]
gi|251767252|ref|ZP_04820032.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei
PRL-20]
gi|254177413|ref|ZP_04884069.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399]
gi|254184768|ref|ZP_04891357.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655]
gi|254185987|ref|ZP_04892505.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur
52237]
gi|254193750|ref|ZP_04900182.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13]
gi|254202956|ref|ZP_04909318.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH]
gi|254208290|ref|ZP_04914639.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU]
gi|254263772|ref|ZP_04954637.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a]
gi|254301043|ref|ZP_04968487.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e]
gi|52213329|emb|CAH39372.1| cytochrome O ubiquinol oxidase protein [Burkholderia pseudomallei
K96243]
gi|52422488|gb|AAU46058.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 23344]
gi|76582254|gb|ABA51728.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710b]
gi|121224801|gb|ABM48332.1| ubiquinol oxidase, subunit IV [Burkholderia mallei SAVP1]
gi|126224525|gb|ABN88030.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 668]
gi|126230453|gb|ABN93866.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106a]
gi|126239585|gb|ABO02697.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei
NCTC 10247]
gi|134250408|gb|EBA50488.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 305]
gi|147746001|gb|EDK53079.1| ubiquinol oxidase, subunit IV [Burkholderia mallei FMH]
gi|147750977|gb|EDK58045.1| ubiquinol oxidase, subunit IV [Burkholderia mallei JHU]
gi|157811393|gb|EDO88563.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 406e]
gi|157933673|gb|EDO89343.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pasteur
52237]
gi|160698453|gb|EDP88423.1| ubiquinol oxidase, subunit IV [Burkholderia mallei ATCC 10399]
gi|169650501|gb|EDS83194.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei S13]
gi|184215360|gb|EDU12341.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1655]
gi|225932148|gb|EEH28148.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei Pakistan
9]
gi|235002323|gb|EEP51747.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia
pseudomallei MSHR346]
gi|238522722|gb|EEP86165.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei GB8
horse 4]
gi|242136430|gb|EES22833.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1106b]
gi|243063388|gb|EES45574.1| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei
PRL-20]
gi|254214774|gb|EET04159.1| ubiquinol oxidase, subunit IV [Burkholderia pseudomallei 1710a]
gi|261826610|gb|ABM99196.2| cytochrome o ubiquinol oxidase, subunit IV [Burkholderia mallei
NCTC 10229]
Length = 110
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + ++GT L GFILS++LT FG+V+ G + + + A QI+VHLV+
Sbjct: 7 SHDGEAHGTVGGYLAGFILSVLLTAASFGLVLSGALSSHASLIA-LAVLAFVQIVVHLVY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM+ W++MA +T++ AI VG++WVM+++ NMMS
Sbjct: 66 FLHMNGSSSQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 109
>gi|83718186|ref|YP_438682.1| ubiquinol oxidase subunit IV [Burkholderia thailandensis E264]
gi|257141752|ref|ZP_05590014.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264]
gi|83652011|gb|ABC36075.1| ubiquinol oxidase, subunit IV [Burkholderia thailandensis E264]
Length = 110
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + ++GT + GFILS++LT FG+V+ G + + + A QI+VHLV+
Sbjct: 7 SHDGEAHGTVGGYVAGFILSVLLTAASFGLVLSGALSSHASLIA-LAVLAFVQIVVHLVY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM+ W++MA +T++ AI VG++WVM+++ NMMS
Sbjct: 66 FLHMNGSSSQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 109
>gi|269964141|ref|ZP_06178438.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831096|gb|EEZ85258.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 103
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + GFI SLILT+IPF V D + CAI QI VH +F
Sbjct: 1 MEQHLDTGASDYVKGFIASLILTVIPFYCVWAQVLPD-TATYAVLFGCAIVQIFVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K E W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEVKTSEGQWNVVSLMFTAIVVLILIAGSIWIIYNMNVNM 101
>gi|71897568|ref|ZP_00679813.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa
Ann-1]
gi|71732471|gb|EAO34524.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa
Ann-1]
Length = 113
Score = 100 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57
M + H+ + K L+GF+L++ILT IPF IVM F K + A
Sbjct: 1 MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETTVALVSALA 59
Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM
Sbjct: 60 AVQMLVHLVYFLHMDRSEEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112
>gi|28198530|ref|NP_778844.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa
Temecula1]
gi|182681209|ref|YP_001829369.1| cytochrome o ubiquinol oxidase subunit IV [Xylella fastidiosa M23]
gi|28056614|gb|AAO28493.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa
Temecula1]
gi|182631319|gb|ACB92095.1| cytochrome o ubiquinol oxidase subunit IV [Xylella fastidiosa M23]
gi|307579655|gb|ADN63624.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 113
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57
M + H+ + K L+GF+L++ILT IPF IVM F K + A
Sbjct: 1 MSHHPHHSSEPTAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETTVALVSALA 59
Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM
Sbjct: 60 AVQMLVHLVYFLHMDRSKEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112
>gi|307293187|ref|ZP_07573033.1| cytochrome o ubiquinol oxidase subunit IV [Sphingobium
chlorophenolicum L-1]
gi|306881253|gb|EFN12469.1| cytochrome o ubiquinol oxidase subunit IV [Sphingobium
chlorophenolicum L-1]
Length = 133
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/105 (46%), Positives = 72/105 (68%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
++G+ + ++GF LS+ILT IPF +VM G D + + I+ A Q++VH+++FLH
Sbjct: 17 EGAHGSLRSNMIGFGLSVILTAIPFWLVMSGVLGDPQLTGVIIMGFAAVQVVVHMIYFLH 76
Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
M+T+VE GWS MAM+ T+++V I GS+WVMYHLN NMM M
Sbjct: 77 MNTRVEGGWSFMAMMLTVVLVVIVLSGSLWVMYHLNANMMPHADM 121
>gi|15837988|ref|NP_298676.1| cytochrome O ubiquinol oxidase, subunit IV [Xylella fastidiosa
9a5c]
gi|9106395|gb|AAF84196.1|AE003970_3 cytochrome O ubiquinol oxidase, subunit IV [Xylella fastidiosa
9a5c]
Length = 113
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57
M + H+ + K L+GF+L++ILT IPF IVM F K + A
Sbjct: 1 MSHHPHHSSEPAAPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETSVALVSALA 59
Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM
Sbjct: 60 AVQMLVHLVYFLHMDRSKEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112
>gi|28868536|ref|NP_791155.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968330|ref|ZP_03396474.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae
pv. tomato T1]
gi|301383462|ref|ZP_07231880.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
tomato Max13]
gi|302060281|ref|ZP_07251822.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
tomato K40]
gi|302129918|ref|ZP_07255908.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28851774|gb|AAO54850.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213926968|gb|EEB60519.1| cytochrome o ubiquinol oxidase, subunit IV [Pseudomonas syringae
pv. tomato T1]
gi|330873013|gb|EGH07162.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330957415|gb|EGH57675.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330963121|gb|EGH63381.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331015175|gb|EGH95231.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 110
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
++ H+ +S+G+ K ++GF+LS+ILT IPF +VM L K++ +++ AI QI+V
Sbjct: 3 NSHHSAEDNSHGSVKSYIIGFVLSVILTAIPFALVMS-PMLPKDMTIAIVLVFAIIQILV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HL +FLH+ ++MA FT +++ + S+W+++ ++ MM+
Sbjct: 62 HLHYFLHLDFTSVQRNNVMAFAFTTMVIVLLVGLSLWIIFSVHREMMA 109
>gi|303246930|ref|ZP_07333206.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio
fructosovorans JJ]
gi|302491637|gb|EFL51520.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio
fructosovorans JJ]
Length = 110
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + N G+ + +GF+LSL+LT+IPF +VM G + A+ QI
Sbjct: 4 THASGDNDVRAGSGSFRTYTLGFVLSLVLTVIPFALVMTGAL-PHGATLACLYAAAVIQI 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+VHL +FLH+ W++++++FT ++ + GS+W+MY L++ M
Sbjct: 63 VVHLHYFLHLDRSSGMYWNMLSLLFTFFIMFLFIGGSLWIMYSLHSRM 110
>gi|113972153|ref|YP_735946.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-4]
gi|113886837|gb|ABI40889.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-4]
Length = 113
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+D+ H + + + K LVGF LS++LT IPF VM F ++ +V+ A+ QI
Sbjct: 7 SHDHSHGADDLA-ASIKSYLVGFGLSVVLTAIPFWAVMTHHFE-QSTTLAIVVVTALVQI 64
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VHL +FLH+ E + + +FT +++ + S+W++ N MM
Sbjct: 65 LVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|109897618|ref|YP_660873.1| cytochrome C oxidase subunit IV [Pseudoalteromonas atlantica T6c]
gi|109699899|gb|ABG39819.1| cytochrome bo3 quinol oxidase subunit 4 [Pseudoalteromonas
atlantica T6c]
Length = 105
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H+ ++G+ K L+GF+LS+ILT IPF +VM G F K+++ ++V A+ QI+VHL
Sbjct: 2 SHSAEATAHGSVKSYLIGFVLSVILTAIPFWMVMSGHF-GKSVLFYSVVSFALVQIVVHL 60
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+FLH++ V+ A +FT +++ + S+W++Y N MM
Sbjct: 61 KYFLHLNFSVKGRLDTFAFLFTALIIVMVVGLSIWIIYSANAMMM 105
>gi|148978616|ref|ZP_01815043.1| hypothetical protein VSWAT3_04531 [Vibrionales bacterium SWAT-3]
gi|145962282|gb|EDK27564.1| hypothetical protein VSWAT3_04531 [Vibrionales bacterium SWAT-3]
Length = 103
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H K ++GF+ SLILTIIPF +V + + CA+ QI VH +F
Sbjct: 1 MEQHLDSGAKDYVIGFVASLILTIIPFYVVWAHALPS-TETYVVLFGCALVQIFVHFKYF 59
Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEVKTTDGQWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101
>gi|153833176|ref|ZP_01985843.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio harveyi HY01]
gi|148870606|gb|EDL69514.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio harveyi HY01]
Length = 103
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + GFI SLILT+IPF V D + CA+ QI VH +F
Sbjct: 1 MENHLDTGASDYVKGFIASLILTVIPFYCVWAQVLPD-TATYAVLFGCALVQIFVHFKYF 59
Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K E W+ ++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEVKTPEGQWNFVSLMFTAIVVLILIAGSIWIIYNMNVNM 101
>gi|134296911|ref|YP_001120646.1| cytochrome C oxidase subunit IV [Burkholderia vietnamiensis G4]
gi|134140068|gb|ABO55811.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia vietnamiensis
G4]
Length = 110
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
+ ++GT + +VGF+LS++LT FG+VM G K + VL AQI+VHLV F
Sbjct: 8 HHDEAHGTARGYVVGFVLSVLLTAASFGLVMAGVLAPKAAVIALAVLA-FAQILVHLVCF 66
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
LHM+T W++MA +T++ I VG++WVM++++ NMMS
Sbjct: 67 LHMNTASSQRWNVMAFSYTVLTALILIVGTLWVMHNVSMNMMS 109
>gi|71274827|ref|ZP_00651115.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa
Dixon]
gi|71899871|ref|ZP_00682020.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa
Ann-1]
gi|170729928|ref|YP_001775361.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa M12]
gi|71164559|gb|EAO14273.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa
Dixon]
gi|71730388|gb|EAO32470.1| Prokaryotic Cytochrome C oxidase subunit IV [Xylella fastidiosa
Ann-1]
gi|167964721|gb|ACA11731.1| cytochrome O ubiquinol oxidase subunit IV [Xylella fastidiosa M12]
Length = 113
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 1 MKYDNIHNMNMHSYGT---KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCA 57
M + H+ K L+GF+L++ILT IPF IVM F K + A
Sbjct: 1 MSHHPHHSSEPTVPSQSTHLKSYLIGFVLAVILTAIPFAIVMNRSF-SKETTVALVSALA 59
Query: 58 IAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VHLV+FLHM E ++ +F+++++ I VGS+WVM++LN +MM
Sbjct: 60 AVQMLVHLVYFLHMDRSEEQRSNVHVALFSLLVIGIVIVGSLWVMHNLNIHMM 112
>gi|156976719|ref|YP_001447625.1| cytochrome o ubiquinol oxidase protein CyoD [Vibrio harveyi ATCC
BAA-1116]
gi|156528313|gb|ABU73398.1| hypothetical protein VIBHAR_05494 [Vibrio harveyi ATCC BAA-1116]
Length = 103
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + GFI SLILT+IPF V D + CA+ QI VH +F
Sbjct: 1 MENHLDTGASDYVKGFIASLILTVIPFYCVWAQLLPD-TATYAVLFGCALVQIFVHFKYF 59
Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K E W+ ++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEVKTPEGQWNFVSLMFTAIVVLILIAGSIWIIYNMNVNM 101
>gi|254500701|ref|ZP_05112852.1| cytochrome o ubiquinol oxidase subunit IV [Labrenzia alexandrii
DFL-11]
gi|222436772|gb|EEE43451.1| cytochrome o ubiquinol oxidase subunit IV [Labrenzia alexandrii
DFL-11]
Length = 104
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + + + L GF L+++LT IPFG+V G + I A+ Q++VHLVF
Sbjct: 3 HTDHTEHRSLGTYLTGFALAIVLTAIPFGLVWTGALTGPAV-YGVIAAAAVIQVLVHLVF 61
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
FLH++ K G ++ + F +++ I GS+W+M+ L++ MM
Sbjct: 62 FLHLNFKSTPGENLFFLAFAAVLICIMVGGSLWIMFDLHHRMM 104
>gi|84386634|ref|ZP_00989660.1| hypothetical protein V12B01_00852 [Vibrio splendidus 12B01]
gi|84378440|gb|EAP95297.1| hypothetical protein V12B01_00852 [Vibrio splendidus 12B01]
Length = 103
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + GFI SLILTIIPF IV + + CA+ QI VH +F
Sbjct: 1 MEQHLDSGATDYVKGFIASLILTIIPFYIVWAHVLPS-TETYVILFGCALVQIFVHFKYF 59
Query: 69 LHMS-TKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEAKSSDGRWNLVSLMFTAIVVLILIAGSVWIIYNMNVNM 101
>gi|329114807|ref|ZP_08243564.1| Ubiquinol oxidase subunit IV [Acetobacter pomorum DM001]
gi|326695938|gb|EGE47622.1| Ubiquinol oxidase subunit IV [Acetobacter pomorum DM001]
Length = 110
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + S+G+ ++GF+L+++LT++ FG+VM + + A+ Q++VHL +
Sbjct: 7 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMSHSLSPAGTLAA-VSALALVQVLVHLHY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
FLHM E W+ M +FT+ VAI VGS+++M + +MMS
Sbjct: 66 FLHMGGDSEQRWNNMCFVFTVAFVAILIVGSVFIMNNTALHMMS 109
>gi|163800404|ref|ZP_02194305.1| hypothetical protein 1103602000595_AND4_06974 [Vibrio sp. AND4]
gi|159175847|gb|EDP60641.1| hypothetical protein AND4_06974 [Vibrio sp. AND4]
Length = 103
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + GFI SLILT+IPF V D + + CA+ QI VH +F
Sbjct: 1 MESHLDTGASDYVKGFIASLILTVIPFYCVWAKVLPD-AATYVVLFGCALVQIFVHFKYF 59
Query: 69 LHMSTKV-EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K E W+ ++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEVKTPEGQWNFVSLMFTAIVVLILIAGSIWIIYNMNVNM 101
>gi|319762686|ref|YP_004126623.1| cytochrome o ubiquinol oxidase subunit iv [Alicycliphilus
denitrificans BC]
gi|330824827|ref|YP_004388130.1| cytochrome o ubiquinol oxidase subunit IV [Alicycliphilus
denitrificans K601]
gi|317117247|gb|ADU99735.1| cytochrome o ubiquinol oxidase subunit IV [Alicycliphilus
denitrificans BC]
gi|329310199|gb|AEB84614.1| cytochrome o ubiquinol oxidase subunit IV [Alicycliphilus
denitrificans K601]
Length = 124
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 67/98 (68%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T+ + GF+L++ILT IPF +VM G D+ L + L A QI+VH+V+FLHM+ K+
Sbjct: 26 TRGDYVKGFVLAVILTAIPFWLVMNGAIQDRTTGALVLGLFAAVQIVVHMVYFLHMNGKI 85
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
+ GW++++ +FTI+ +A+ G++WVM+H+N MM
Sbjct: 86 QGGWTMLSTLFTIVFLAVTIAGTLWVMFHMNAAMMPSH 123
>gi|127511303|ref|YP_001092500.1| cytochrome C oxidase subunit IV [Shewanella loihica PV-4]
gi|126636598|gb|ABO22241.1| cytochrome C oxidase subunit IV [Shewanella loihica PV-4]
Length = 108
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M H + + + K L GF+LS++LT IPF VM + +++ A+ Q
Sbjct: 1 MSQATTHGQDDLA-ASIKSYLTGFLLSVVLTGIPFWAVMTHSLE-TSTTLAIVLVLAVVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHL +FLH+ E + ++ +FT +++ + S+W++Y N+ MM
Sbjct: 59 ILVHLKYFLHLDFSKEGKVNTLSFMFTALVIVMVVGLSVWIIYAANDLMM 108
>gi|332184971|ref|ZP_08386720.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17]
gi|332014695|gb|EGI56751.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17]
Length = 101
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/91 (51%), Positives = 65/91 (71%)
Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80
++GF+LS+ILT IPF VM G D L I+ A QI+VH+++FLHM+TK E GW+
Sbjct: 1 MIGFVLSVILTAIPFWAVMTGALGDTQTTALVIMGLAFVQIVVHMIYFLHMNTKSEGGWT 60
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
+MA++FT ++V I GS+WVMYH+N NMM
Sbjct: 61 MMALVFTAVLVVITLSGSIWVMYHMNTNMMP 91
>gi|172061019|ref|YP_001808671.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria
MC40-6]
gi|171993536|gb|ACB64455.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria
MC40-6]
Length = 110
Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + L Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVVLTAASFGLVMGGVLSPHASLIALAALA-FVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|115352155|ref|YP_773994.1| cytochrome C oxidase subunit IV [Burkholderia ambifaria AMMD]
gi|171318688|ref|ZP_02907832.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria
MEX-5]
gi|254252017|ref|ZP_04945335.1| cytochrome o ubiquinol oxidase [Burkholderia dolosa AUO158]
gi|115282143|gb|ABI87660.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia ambifaria
AMMD]
gi|124894626|gb|EAY68506.1| cytochrome o ubiquinol oxidase [Burkholderia dolosa AUO158]
gi|171096123|gb|EDT41048.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria
MEX-5]
Length = 110
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + L Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIALAALA-FVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|167585492|ref|ZP_02377880.1| cytochrome C oxidase subunit IV [Burkholderia ubonensis Bu]
Length = 110
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
+ ++GT +VGF+LS++LT FG+VM G K + VL AQI+VHLV F
Sbjct: 8 HHDEAHGTAGGYIVGFVLSVLLTAASFGLVMGGVLAPKAAVIALAVLA-FAQILVHLVCF 66
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
LHM+T W++MA +T++ I VG++WVM++++ NMMS
Sbjct: 67 LHMNTSSSQRWNVMAFSYTVLTALILIVGTLWVMHNVSMNMMS 109
>gi|152994134|ref|YP_001338969.1| cytochrome o ubiquinol oxidase subunit IV [Marinomonas sp. MWYL1]
gi|150835058|gb|ABR69034.1| Cytochrome o ubiquinol oxidase subunit IV [Marinomonas sp. MWYL1]
Length = 107
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H+ +S+G+ K + GF+LS+ILT IPF +VM F DK +TI+L AI QI VH
Sbjct: 2 SDHSSEANSHGSVKSYVTGFVLSVILTGIPFWMVMTEAF-DKGPTYVTIILLAIVQIFVH 60
Query: 65 LVFFLHMSTKVEDG-WSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
L +FLH++ E G + +F ++++ + S+W++Y N MM
Sbjct: 61 LKYFLHLNFTSEQGKLDAYSFLFALMIIVMVVALSVWIIYASNAMMM 107
>gi|260769714|ref|ZP_05878647.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio furnissii CIP
102972]
gi|260615052|gb|EEX40238.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio furnissii CIP
102972]
gi|315182290|gb|ADT89203.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio furnissii NCTC
11218]
Length = 104
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
N H K + GFI SLILTIIPF V + + + CAI Q+ VH V+F
Sbjct: 2 SNQHVDSGKSDYIKGFIASLILTIIPFYFVATQSL-PEAVTFALMFGCAIVQVFVHFVYF 60
Query: 69 LHMSTKVE-DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
LHM T+ E W++++++FT ++V I GS+W+M++LN NMM
Sbjct: 61 LHMETRTEDGRWNLVSLMFTALVVLILIGGSIWIMWNLNINMM 103
>gi|170701549|ref|ZP_02892499.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria
IOP40-10]
gi|170133543|gb|EDT01921.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia ambifaria
IOP40-10]
Length = 110
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + +G+ + GFILS++LT FG+VM G + L + Q
Sbjct: 1 MAHSHS-SQLEEGHGSVGGYVAGFILSVLLTAASFGLVMGGVLSPHASLIALAALA-LVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|325921009|ref|ZP_08182892.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas gardneri ATCC
19865]
gi|325548516|gb|EGD19487.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas gardneri ATCC
19865]
Length = 111
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSY-GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + H ++ G K L+GF++++ILT+IPF +VM G F K + + I L A
Sbjct: 1 MANHHAHETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVIVISLMAAV 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q++VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 60 QMLVHMVYFLHMDRSPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|312881378|ref|ZP_07741175.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309371018|gb|EFP98473.1| cytochrome O ubiquinol oxidase subunit IV [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 103
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + + GF+ SLILT+IPF + + + CAI QI+VH +F
Sbjct: 1 MGQHVETSSSDYVKGFVASLILTVIPFYLAYTKAL-PNGVTYALLFGCAIVQILVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K E W+I+++ FT I+V I GS+W++Y++ NM
Sbjct: 60 LHMEAKTSEGQWNIVSLAFTAIIVLILIAGSVWIIYNMTANM 101
>gi|186472485|ref|YP_001859827.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum
STM815]
gi|184194817|gb|ACC72781.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia phymatum
STM815]
Length = 113
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 1 MKYDNIHNMNMH-SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M + N H ++ +G +VGF+L+++LT FGIVM+G+ L + A+
Sbjct: 1 MAHSNSHALDAEAGHGGIGGYVVGFVLAVVLTAAAFGIVMQGWL-PAAYAPLVLAALAVV 59
Query: 60 QIIVHLVFFLHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
QI+VHLV FLHMS W+ +A+ +T++ G++WVM++++ NMMS
Sbjct: 60 QIVVHLVCFLHMSVSTSGQRWNTLALAYTVLAAMFLVFGTVWVMHNVSMNMMS 112
>gi|289670391|ref|ZP_06491466.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 111
Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++
Sbjct: 4 HRHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVVVISVMAAVQML 62
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|330819565|ref|YP_004348427.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia gladioli
BSR3]
gi|327371560|gb|AEA62915.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia gladioli
BSR3]
Length = 126
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
GT K ++G ILS++LT + FG VM + +V C +AQ+IV L +FLH+ T
Sbjct: 19 GTLKGYVIGMILSVLLTFVSFGAVMTDIVPRGWGLAAIVVAC-VAQLIVQLFYFLHIGTA 77
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
+ + T ++A+ S+WV+++ N NMM
Sbjct: 78 RSQRANTGIFLCTGFLIAVIVGLSLWVIHNANVNMMPTH 116
>gi|146338788|ref|YP_001203836.1| cytochrome o ubiquinol oxidase subunit IV [Bradyrhizobium sp.
ORS278]
gi|146191594|emb|CAL75599.1| cytochrome o ubiquinol oxidase, subunit IV (Ubiquinol oxidase chain
D) [Bradyrhizobium sp. ORS278]
Length = 123
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/103 (53%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
GT++ L+GF LS++LT IPF +VM G DK + L I+ A Q++VH++FFLHM+TK
Sbjct: 20 GTRQGQLIGFGLSVVLTAIPFLLVMNGSL-DKQVSALIIMAFAAVQVVVHMIFFLHMNTK 78
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRS 117
E GW++MA+IFTIIMV I GS+WVM+HL NMM + M S
Sbjct: 79 AEGGWTMMALIFTIIMVVIALSGSLWVMHHLTTNMMPVHEMGS 121
>gi|167566667|ref|ZP_02359583.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis EO147]
gi|167573742|ref|ZP_02366616.1| ubiquinol oxidase, subunit IV [Burkholderia oklahomensis C6786]
Length = 110
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D + + ++GT + GFILS++LT FG+V+ G + L QI+V
Sbjct: 3 DTHLSHDGEAHGTVGGYVAGFILSVLLTAASFGLVLSGALSSHASLIALAALA-FVQIVV 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLHM+ W++MA +T++ AI VG++WVM+++ NMMS
Sbjct: 62 HLVYFLHMNASSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVGMNMMS 109
>gi|433189|dbj|BAA02483.1| ubiquinol oxidase subunit IV precursor [Acetobacter aceti]
gi|229365480|dbj|BAH57988.1| ubiquinol oxidase subunit IV [Acetobacter lovaniensis]
Length = 109
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + S+G+ ++GF+L+++LT++ FG+VM I A+ Q++VHL +
Sbjct: 7 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMTPQ-PSPAGTLAAISALALVQVLVHLHY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
FLHM E W+ M +FT+ VAI VG++++M + + M
Sbjct: 66 FLHMGGSSEQRWNNMCFVFTVAFVAILIVGTVFIMNNTEHMM 107
>gi|114561409|ref|YP_748922.1| cytochrome C oxidase subunit IV [Shewanella frigidimarina NCIMB
400]
gi|114332702|gb|ABI70084.1| cytochrome C oxidase subunit IV [Shewanella frigidimarina NCIMB
400]
Length = 109
Score = 98.3 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + + K LVGF+LS++LT IPF VM F D +V+ A+ Q
Sbjct: 1 MSNAHASHGEGDFSASVKSYLVGFVLSVVLTGIPFWSVMTHQF-DHMTTLWVVVITALVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHL +FLH+ E + + +FT +++ + S+W++Y N MM
Sbjct: 60 IVVHLKYFLHLDFSKEGRINTFSFLFTALIIVMVVGLSVWIIYAANELMM 109
>gi|296533148|ref|ZP_06895777.1| cytochrome o ubiquinol oxidase subunit IV [Roseomonas cervicalis
ATCC 49957]
gi|296266520|gb|EFH12516.1| cytochrome o ubiquinol oxidase subunit IV [Roseomonas cervicalis
ATCC 49957]
Length = 123
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
D + H++G L G + SL LT +PF IV+ G+ + + ++L A+AQ+ V
Sbjct: 15 DPAAAQSAHAHGDALGYLRGLLWSLALTALPFAIVLGGWL-PRELAVPAVLLLAVAQMAV 73
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
HLV+FLH+ T + W++MA +FT ++V I +GS+WVM +L+ NMM
Sbjct: 74 HLVYFLHLRTAPGERWTLMAFLFTAVVVGIVVIGSLWVMQNLDANMMP 121
>gi|319424516|gb|ADV52590.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella putrefaciens
200]
Length = 113
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 2 KYDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
+ + H+ + K L+GF+LS++LT IPF VM F K +++ AI Q
Sbjct: 5 SHTDKHSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQ 63
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHL +FLH+ E + + +FT +++ + S+W++ N MM
Sbjct: 64 IVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|21230619|ref|NP_636536.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66769385|ref|YP_244147.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. campestris str. 8004]
gi|188992572|ref|YP_001904582.1| Cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. campestris str. B100]
gi|21112200|gb|AAM40460.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66574717|gb|AAY50127.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. campestris str. 8004]
gi|167734332|emb|CAP52542.1| Cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. campestris]
Length = 111
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + N G K L+GF++++ILT+IPF +VM G F K + + I + A Q++
Sbjct: 4 HHHTENAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVIVISVMAAVQML 62
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|332307456|ref|YP_004435307.1| cytochrome o ubiquinol oxidase subunit IV [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174785|gb|AEE24039.1| cytochrome o ubiquinol oxidase subunit IV [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 105
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H+ ++G+ K LVGF+LS+ILT IPF +VM G F K+++ ++V AI QI+VHL
Sbjct: 2 SHSAETTAHGSVKSYLVGFVLSVILTGIPFWMVMSGHF-GKSVLFYSVVSFAIVQIVVHL 60
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+FLH+ V+ A +FT +++ + S+W++Y N MM
Sbjct: 61 KYFLHLDFSVKGRMDTFAFLFTALIIVMVVGLSIWIIYSANAMMM 105
>gi|153837559|ref|ZP_01990226.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio parahaemolyticus
AQ3810]
gi|149749056|gb|EDM59867.1| cytOchrome o ubiquinol oxidase subunit IV [Vibrio parahaemolyticus
AQ3810]
gi|328470437|gb|EGF41348.1| hypothetical protein VP10329_06552 [Vibrio parahaemolyticus 10329]
Length = 103
Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + + GF+ SLILT+IPF V + + + CA+ QI VH +F
Sbjct: 1 MGQHVETSSSDYVKGFVASLILTVIPFYFVWAQTL-PASTTYVVMFTCALVQIFVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEAKTSDGRWNLVSLMFTAIVVLILIAGSIWIIYNMNVNM 101
>gi|21321322|dbj|BAB97176.1| ubiquinol oxidase subunit IV [Acetobacter pasteurianus]
Length = 109
Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ + S+G+ ++GF+L+++LT++ FG+VM + + A+ Q++VHL +
Sbjct: 7 SSSGESHGSVSSYIIGFVLAVVLTVLSFGVVMSHSLSPAGTLAA-VSALALVQVLVHLHY 65
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
FLHM E W+ M +FT+ VAI VGS+++M + + M
Sbjct: 66 FLHMGGDSEQRWNNMCFVFTVAFVAILIVGSVFIMNNTEHMM 107
>gi|89072118|ref|ZP_01158714.1| hypothetical protein SKA34_08788 [Photobacterium sp. SKA34]
gi|89052219|gb|EAR57670.1| hypothetical protein SKA34_08788 [Photobacterium sp. SKA34]
Length = 103
Score = 97.5 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMS-TKVED 77
+ GFI SLI+T+IPF V F + ++ CAI QI VH +FLHM E
Sbjct: 11 DYVKGFIASLIITVIPFYCVWAKIFT-EATTYAVLLGCAIVQIFVHFKYFLHMEAKSSEG 69
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
W+I++++FT I+V I GS+W++Y++N NM
Sbjct: 70 KWNIVSLMFTSIVVLILIAGSVWIIYNMNVNM 101
>gi|28900485|ref|NP_800140.1| hypothetical protein VPA0630 [Vibrio parahaemolyticus RIMD 2210633]
gi|260365638|ref|ZP_05778159.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
K5030]
gi|260877438|ref|ZP_05889793.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
AN-5034]
gi|260898919|ref|ZP_05907360.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
Peru-466]
gi|260901247|ref|ZP_05909642.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
AQ4037]
gi|28808865|dbj|BAC61973.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308089178|gb|EFO38873.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
Peru-466]
gi|308090840|gb|EFO40535.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
AN-5034]
gi|308106803|gb|EFO44343.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
AQ4037]
gi|308111444|gb|EFO48984.1| cytochrome o ubiquinol oxidase, subunit IV [Vibrio parahaemolyticus
K5030]
Length = 103
Score = 97.5 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M H + + GF+ SLILT+IPF V + + + CA+ QI VH +F
Sbjct: 1 MGQHVETSSSDYVKGFVASLILTVIPFYFVWAQTL-PASATYVVMFTCALVQIFVHFKYF 59
Query: 69 LHMSTK-VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LHM K + W++++++FT I+V I GS+W++Y++N NM
Sbjct: 60 LHMEAKTSDGRWNLVSLMFTAIVVLILIAGSIWIIYNMNVNM 101
>gi|288962725|ref|YP_003453019.1| cytochrome o ubiquinol oxidase operon protein [Azospirillum sp.
B510]
gi|288914991|dbj|BAI76475.1| cytochrome o ubiquinol oxidase operon protein [Azospirillum sp.
B510]
Length = 139
Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
++GT ++GF+LS+ILT+IPF +VM G D + ++ A+ QIIVH+V+FLH
Sbjct: 30 AGAHGTFGSYMIGFVLSVILTVIPFWLVMNGTL-DNVTTTVVVLALAVVQIIVHMVYFLH 88
Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
M+ + E GWS++AMIFTII+V I F GS+WVMYHLN+NMM
Sbjct: 89 MNGRAEGGWSMLAMIFTIIVVVIMFSGSLWVMYHLNHNMMP 129
>gi|170724797|ref|YP_001758823.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella woodyi ATCC
51908]
gi|169810144|gb|ACA84728.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella woodyi ATCC
51908]
Length = 111
Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N + + G+ K L+GF+LS++LT IPF V+ F DK + +++ A+ QI+VHL +
Sbjct: 10 NSSANFMGSVKSYLMGFMLSVVLTAIPFWAVITHHF-DKPVTLGLVLVTAVVQIVVHLKY 68
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
FLH+ E + + +FT +++ + S+W++Y N+ MM
Sbjct: 69 FLHLDFSKEGKLNTFSFLFTALIIVMVVGLSVWIIYAANDLMM 111
>gi|134296073|ref|YP_001119808.1| cytochrome C oxidase subunit IV [Burkholderia vietnamiensis G4]
gi|134139230|gb|ABO54973.1| cytochrome bo3 quinol oxidase subunit 4 [Burkholderia vietnamiensis
G4]
Length = 110
Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + + M +G+ GFILS++LT FG+V+ G + L Q
Sbjct: 1 MAHSHSSQM-EEGHGSVGGYFAGFILSVLLTAASFGLVLGGVLSPHASLIALAALA-FVQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLV+FLHM+ W++MA +T++ AI VG++WVM++++ NMMS
Sbjct: 59 IVVHLVYFLHMNGSSGQRWNVMAFSYTVLTAAILIVGTLWVMHNVSMNMMS 109
>gi|58581255|ref|YP_200271.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84623175|ref|YP_450547.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188575779|ref|YP_001912708.1| cytOchrome o ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|289662732|ref|ZP_06484313.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. vasculorum NCPPB702]
gi|58425849|gb|AAW74886.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84367115|dbj|BAE68273.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|188520231|gb|ACD58176.1| cytOchrome o ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 111
Score = 97.1 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++
Sbjct: 4 HHHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVVVISVMAAVQML 62
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|166713085|ref|ZP_02244292.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 111
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + G K L+GF++++ILT+IPF +VM G F K + I + A Q++
Sbjct: 4 HHHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTVTVISVMAAVQML 62
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|325914849|ref|ZP_08177184.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas vesicatoria
ATCC 35937]
gi|325538940|gb|EGD10601.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas vesicatoria
ATCC 35937]
Length = 111
Score = 96.8 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++
Sbjct: 4 HHHTETAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTIVVISVMAAVQML 62
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|146294942|ref|YP_001185366.1| cytochrome C oxidase subunit IV [Shewanella putrefaciens CN-32]
gi|145566632|gb|ABP77567.1| cytochrome C oxidase subunit IV [Shewanella putrefaciens CN-32]
Length = 113
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 2 KYDNIHNMNMHS-YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
+ + H+ S + K L+GF+LS++LT IPF VM F K +++ AI Q
Sbjct: 5 SHTDKHSHGTDSLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQ 63
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I+VHL +FLH+ E + + +FT +++ + S+W++ N MM
Sbjct: 64 IVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|21242014|ref|NP_641596.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas axonopodis
pv. citri str. 306]
gi|78046866|ref|YP_363041.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|294627029|ref|ZP_06705619.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294664345|ref|ZP_06729709.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325928656|ref|ZP_08189835.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas perforans
91-118]
gi|21107412|gb|AAM36132.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas axonopodis
pv. citri str. 306]
gi|78035296|emb|CAJ22941.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|292598691|gb|EFF42838.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292605885|gb|EFF49172.1| cytochrome O ubiquinol oxidase subunit IV [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325540984|gb|EGD12547.1| cytochrome bo3 quinol oxidase subunit 4 [Xanthomonas perforans
91-118]
Length = 111
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + G K L+GF++++ILT+IPF +VM G F K + + I + A Q++
Sbjct: 4 HHHTDTAADAHAGGLKSYLIGFVMAVILTVIPFAMVMSGAF-SKGVTIVVISVMAAVQML 62
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
VH+V+FLHM E ++ +F+++++ I VGS+WV++++N NMM
Sbjct: 63 VHMVYFLHMDRTPEQRSNVQVGLFSLLIIGIVIVGSLWVLHNMNVNMM 110
>gi|193212540|ref|YP_001998493.1| cytochrome o ubiquinol oxidase subunit IV [Chlorobaculum parvum
NCIB 8327]
gi|193086017|gb|ACF11293.1| cytochrome o ubiquinol oxidase subunit IV [Chlorobaculum parvum
NCIB 8327]
Length = 108
Score = 96.8 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M+ +I N + + K + GFIL+++LTII F +V+ G K I + + A AQ
Sbjct: 1 MEQTHIENTATE-HVSYKNYITGFILAVVLTIISFSLVLTGVV-PKQIAVIGLFAAAAAQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I VHL +FLH+ + W+++ + FT +++ I G++WV++ LN+ MM
Sbjct: 59 IAVHLYYFLHLDSSKSQRWNVITISFTALLLFIFIAGTIWVIHTLNSRMM 108
>gi|120596925|ref|YP_961499.1| cytochrome C oxidase subunit IV [Shewanella sp. W3-18-1]
gi|160877455|ref|YP_001556771.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS195]
gi|217975292|ref|YP_002360043.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS223]
gi|120557018|gb|ABM22945.1| cytochrome C oxidase subunit IV [Shewanella sp. W3-18-1]
gi|160862977|gb|ABX51511.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS195]
gi|217500427|gb|ACK48620.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS223]
gi|315269657|gb|ADT96510.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS678]
Length = 113
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K L+GF+LS++LT IPF VM F K +++ AI QI+VHL +FLH+
Sbjct: 20 SIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQIVVHLKYFLHLDFSK 78
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
E + + +FT +++ + S+W++ N MM
Sbjct: 79 EGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|304412072|ref|ZP_07393682.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS183]
gi|307305967|ref|ZP_07585713.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
BA175]
gi|304349622|gb|EFM14030.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS183]
gi|306911460|gb|EFN41886.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
BA175]
Length = 113
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K L+GF+LS++LT IPF VM F K +++ AI QI+VHL +FLH+
Sbjct: 20 SIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAIVQIVVHLKYFLHLDFSK 78
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
E + + +FT +++ + S+W++ N MM
Sbjct: 79 EGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|153002719|ref|YP_001368400.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS185]
gi|151367337|gb|ABS10337.1| Cytochrome o ubiquinol oxidase subunit IV [Shewanella baltica
OS185]
Length = 113
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 2 KYDNIHNMNMHSY---GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAI 58
+ + H + + + K L+GF+LS++LT IPF VM F K +++ AI
Sbjct: 3 AHSHTHKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFE-KATTLSLVLVMAI 61
Query: 59 AQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
QI+VHL +FLH+ E + + +FT +++ + S+W++ N MM
Sbjct: 62 VQIVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|114049401|ref|YP_739951.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-7]
gi|113890843|gb|ABI44894.1| cytochrome C oxidase subunit IV [Shewanella sp. MR-7]
Length = 113
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K LVGF+LS++LT IPF VM F ++ +V+ A+ QI+VHL +FLH+
Sbjct: 20 SIKSYLVGFVLSVVLTAIPFWAVMTHHFE-QSTTLAIVVVTALVQILVHLKYFLHLDFSK 78
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
E + + +FT +++ + S+W++ N MM
Sbjct: 79 EGKINTFSFLFTALIIVMVVGLSVWIILEANALMM 113
>gi|326793470|ref|YP_004311290.1| cytochrome o ubiquinol oxidase subunit IV [Marinomonas mediterranea
MMB-1]
gi|326544234|gb|ADZ89454.1| cytochrome o ubiquinol oxidase subunit IV [Marinomonas mediterranea
MMB-1]
Length = 108
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 5 NIHNMNMH-SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+ H+ + H ++G+ +VGF+LS++LT+IPF VM F D+ + IV+ A+ QI V
Sbjct: 2 SQHDHDSHDAHGSVSSYVVGFVLSVVLTVIPFWAVMTSAF-DRATLFAVIVVTAVVQIFV 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
HL +FLH++ E ++ IFT I++ + S+W++Y MM
Sbjct: 61 HLKYFLHLNFTKEGKLDTLSFIFTAIIIIMVVALSIWIIYESVLMMM 107
>gi|89073979|ref|ZP_01160485.1| cytochrome o ubiquinol oxidase subunit IV [Photobacterium sp.
SKA34]
gi|89050307|gb|EAR55811.1| cytochrome o ubiquinol oxidase subunit IV [Photobacterium sp.
SKA34]
Length = 112
Score = 95.6 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H ++G+ K+ L G ILS+ILT++PF +VM G K ++ I++ A+AQ
Sbjct: 1 MANSSEHGQGGQAHGSVKEYLNGLILSIILTVVPFAMVMAG-IGSKPLIIGVIMVFAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I V LV+FLHM+ + W+ + +F +++VAI +GS+W+M HLN+NM+
Sbjct: 60 IFVQLVYFLHMNASSKQMWNTSSAVFVVVIVAIILIGSLWIMEHLNHNML 109
>gi|58040344|ref|YP_192308.1| cytochrome o ubiquinol oxidase subunit IV [Gluconobacter oxydans
621H]
gi|58002758|gb|AAW61652.1| Cytochrome o ubiquinol oxidase subunit IV [Gluconobacter oxydans
621H]
Length = 111
Score = 95.2 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M M S+G+ L+GF+L++ILT+ F VM + + + A+ Q
Sbjct: 1 MTQAPTTTMTGDSHGSYPSYLIGFVLAVILTVASFAAVMTHALSP-GMTMAALTVLAVVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
I+VHLVFFLHM+T E W++M IF V + G++++M+ NMMS
Sbjct: 60 IVVHLVFFLHMNTSTEQSWNLMCFIFAAASVIVIIGGTIFIMHDTAINMMS 110
>gi|330502492|ref|YP_004379361.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas mendocina
NK-01]
gi|328916778|gb|AEB57609.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas mendocina
NK-01]
Length = 111
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFL--DKNIMCLTIVLCAI 58
M + + H + K L GFILS+ILT+IPF +VM L + +T+VL +
Sbjct: 1 MAHQDNHAAHAVG---FKDYLTGFILSVILTVIPFMLVMHPEVLGLSRGATLITVVLFGL 57
Query: 59 AQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
AQ++VHLV+FLHM T E W++++MIFT++++A S+W+M+ ++ +MM
Sbjct: 58 AQVLVHLVYFLHMKTDAEGRWNVVSMIFTVLIIAFVVGLSVWIMWSMHYHMM 109
>gi|254234442|ref|ZP_04927765.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
C3719]
gi|126166373|gb|EAZ51884.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
C3719]
Length = 111
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H+ + +G+ +GF+LS+ILT IPF +VM G F ++ LT+V+ + Q++VHL
Sbjct: 5 AHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGF-SRHATILTMVVLGLVQVVVHL 63
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
+ FLHM+ E W++MA IFT+I++ + S+W+++ + MM M
Sbjct: 64 ICFLHMNKSSEGRWNVMAFIFTVIVILLVVGLSLWIIFSADMLMMPMP 111
>gi|90579540|ref|ZP_01235349.1| cytochrome o ubiquinol oxidase subunit IV [Vibrio angustum S14]
gi|90439114|gb|EAS64296.1| cytochrome o ubiquinol oxidase subunit IV [Vibrio angustum S14]
Length = 112
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/110 (40%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + H ++G+ K+ L G ILS+ILT++PF +VM G K ++ I++ A+AQ
Sbjct: 1 MANSSEHGQGGQAHGSVKEYLNGLILSIILTVVPFVMVMAG-IGSKPLIIGVIMVFAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
I V LV+FLHM+T + W+ + +F +++VAI +GS+W+M HLN+NM+
Sbjct: 60 IFVQLVYFLHMNTSSKQMWNTSSAVFVVVIVAIILIGSLWIMEHLNHNML 109
>gi|148254209|ref|YP_001238794.1| cytochrome O ubiquinol oxidase protein subunit IV [Bradyrhizobium
sp. BTAi1]
gi|146406382|gb|ABQ34888.1| cytochrome bb3 quinol oxidase subunit 4 [Bradyrhizobium sp. BTAi1]
Length = 130
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 8 NMNMHSYGTKKQ----CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+G + + G L+++LT F I +I IV AIAQ+ V
Sbjct: 15 APGEQQHGDLRSRILFHVAGLGLAVLLTAASFFIAGTNLVWQPSIPVALIV-LAIAQMGV 73
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
HLVFFLH++T ++ +++A+ F +I+V + GS+W+M +LN+NMM M+ + +
Sbjct: 74 HLVFFLHITTGPDNTNNVLALAFGLIIVFLVVGGSLWIMSNLNHNMMPMDPLMQMQ 129
>gi|20378346|gb|AAM20917.1|AF439739_4 cytochrome bo subunit D [Vitreoscilla sp. C1]
Length = 103
Score = 94.1 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ N H G+ KQ +VGFI+S+ILT+IPFG+VM G + K I T+V+ AQ+ V LVF
Sbjct: 3 SHNNHDAGSVKQYVVGFIISIILTVIPFGMVMGG--MPKGITVATLVITMFAQVWVQLVF 60
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
FLHM + W I + +T + +AI FVGS+W++ L++ MM
Sbjct: 61 FLHMKREDAQRWHIASFWYTFLTIAILFVGSVWILSELHSFMM 103
>gi|308070783|ref|YP_003872388.1| Heme/copper-type cytochrome/quinol oxidase, subunit 4
[Paenibacillus polymyxa E681]
gi|305860062|gb|ADM71850.1| Heme/copper-type cytochrome/quinol oxidase, subunit 4
[Paenibacillus polymyxa E681]
Length = 111
Score = 94.1 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H + S+G+ K ++GFILS++LTIIP G+VM L + + I+ A+ Q +V L
Sbjct: 10 SHGHDD-SHGSVKSYVIGFILSIVLTIIPLGVVMNH-MLSRTSTMVVILAAAVLQFLVQL 67
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
FF+H+ W++M +IF ++++ GS+W+M
Sbjct: 68 FFFMHIRESNGPRWNVMTLIFGVVILLTVVGGSVWIM 104
>gi|312964549|ref|ZP_07778805.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
2362-75]
gi|312290783|gb|EFR18660.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
2362-75]
gi|323191347|gb|EFZ76610.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
RN587/1]
gi|330910221|gb|EGH38731.1| cytochrome O ubiquinol oxidase subunit 4 [Escherichia coli AA86]
Length = 91
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80
+ GFILS+ILT+IPF +VM G ++ TI+ A+ QI+VHLV FLHM+TK ++GW+
Sbjct: 1 MTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQILVHLVCFLHMNTKSDEGWN 59
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 60 MTAFVFTVLIIAILVVGSIWIMWNLNYNMM 89
>gi|301025684|ref|ZP_07189200.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
196-1]
gi|312970524|ref|ZP_07784705.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
1827-70]
gi|299879996|gb|EFI88207.1| cytOchrome o ubiquinol oxidase subunit IV [Escherichia coli MS
196-1]
gi|310337173|gb|EFQ02311.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
1827-70]
gi|315616631|gb|EFU97248.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 3431]
gi|320181589|gb|EFW56504.1| Cytochrome O ubiquinol oxidase subunit IV [Shigella boydii ATCC
9905]
gi|320197133|gb|EFW71750.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli
WV_060327]
gi|320201673|gb|EFW76249.1| Cytochrome O ubiquinol oxidase subunit IV [Escherichia coli
EC4100B]
gi|323157117|gb|EFZ43241.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
EPECa14]
gi|323160461|gb|EFZ46409.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli
E128010]
gi|323164228|gb|EFZ50035.1| cytochrome o ubiquinol oxidase subunit IV [Shigella sonnei 53G]
gi|323170514|gb|EFZ56164.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli LT-68]
gi|323178303|gb|EFZ63881.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia coli 1180]
gi|325498280|gb|EGC96139.1| cytochrome o ubiquinol oxidase subunit IV [Escherichia fergusonii
ECD227]
gi|332085679|gb|EGI90843.1| cytochrome o ubiquinol oxidase subunit IV [Shigella dysenteriae
155-74]
gi|332098563|gb|EGJ03529.1| cytochrome o ubiquinol oxidase subunit IV [Shigella boydii 3594-74]
gi|332760715|gb|EGJ91003.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri
4343-70]
gi|332761669|gb|EGJ91948.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri
2747-71]
gi|332763720|gb|EGJ93958.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-671]
gi|332768345|gb|EGJ98529.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri
2930-71]
gi|333007851|gb|EGK27327.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-218]
gi|333010886|gb|EGK30312.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-272]
gi|333021384|gb|EGK40637.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-227]
gi|333021987|gb|EGK41233.1| cytochrome o ubiquinol oxidase subunit IV [Shigella flexneri K-304]
Length = 91
Score = 93.7 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80
+ GFILS+ILT+IPF +VM G ++ TI+ A+ Q++VHLV FLHM+TK ++GW+
Sbjct: 1 MTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWN 59
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ A +FT++++AI VGS+W+M++LN NMM
Sbjct: 60 MTAFVFTVLIIAILVVGSIWIMWNLNYNMM 89
>gi|319945343|ref|ZP_08019605.1| cytochrome o ubiquinol oxidase subunit IV [Lautropia mirabilis ATCC
51599]
gi|319741913|gb|EFV94338.1| cytochrome o ubiquinol oxidase subunit IV [Lautropia mirabilis ATCC
51599]
Length = 105
Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 67/103 (65%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M + + C +GF+L++ILT+IPFG+VM G F D L I+ + QIIVH+V+F
Sbjct: 1 MGQPPHVSGTDCNIGFLLAVILTLIPFGLVMTGAFEDTGTAALIIMGLGVVQIIVHMVYF 60
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
L ++ + E W++ A+I T+++VAI VG++W M L+ N++
Sbjct: 61 LQLNCRAEGSWTLPALIVTVLLVAILLVGTLWGMPPLDGNVVP 103
>gi|310644019|ref|YP_003948777.1| cytochrome o ubiquinol oxidase subunit iv [Paenibacillus polymyxa
SC2]
gi|309248969|gb|ADO58536.1| Cytochrome o ubiquinol oxidase subunit IV [Paenibacillus polymyxa
SC2]
Length = 111
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H + S+G+ K ++GFILS++LTIIP +VM L + + I+ A+ Q +V L
Sbjct: 10 SHGHDD-SHGSVKSYVIGFILSIVLTIIPLFVVMNH-MLSRTSTMVVILAAAVLQFLVQL 67
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
FF+H+ W++M +IF ++++ GS+W+M
Sbjct: 68 FFFMHIRESNGPRWNVMTLIFGVVILLTVVGGSVWIM 104
>gi|320186058|gb|EFW60803.1| Cytochrome O ubiquinol oxidase subunit IV [Shigella flexneri CDC
796-83]
Length = 91
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80
+ GFILS+ILT+IPF +VM G ++ TI+ A+ Q++VHLV FLHM+TK ++GW+
Sbjct: 1 MTGFILSIILTVIPFWMVMTGAASP-AVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWN 59
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ A +FT++++ I VGS+W+M++LN NMM
Sbjct: 60 MTAFVFTVLIITILVVGSIWIMWNLNYNMM 89
>gi|240849796|ref|YP_002971184.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella grahamii
as4aup]
gi|240266919|gb|ACS50507.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella grahamii
as4aup]
Length = 182
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 8 NMNMHSYG-TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIM--CLTIVLCAIAQIIVH 64
+M ++G + LVGFIL++ T+ F VM G + ++ AI QIIV
Sbjct: 2 SMQNETHGPSTGSYLVGFILAVFFTLGSFVPVMYGMMESWAVSTKVAYLLGMAIIQIIVQ 61
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VFFLH+++ + W++ A+ F I V + G+ W + HLN NMM
Sbjct: 62 IVFFLHLNSGPDAKWNLSALWFAAICVFVIIGGTWWAISHLNYNMM 107
>gi|319778050|ref|YP_004134480.1| cytochrome o ubiquinol oxidase subunit iv [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317171769|gb|ADV15306.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 136
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
G ++G+ L+++LTI F + + + +V+ A+AQ+ VHLVFFLH++T
Sbjct: 31 GGLLGYVIGYGLAILLTIASFLAAQTD-LIYQPAVISALVVLAVAQMGVHLVFFLHLTTG 89
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
++ +I+A+ F +++VA+ +GS+W+M HLN NM +M
Sbjct: 90 PDNTNNILALAFGVLIVALVVLGSVWIMAHLNENMAAM 127
>gi|251794161|ref|YP_003008892.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus sp. JDR-2]
gi|247541787|gb|ACS98805.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus sp. JDR-2]
Length = 110
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 4 DNIHNMNMH-SYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ H + H S+G+ K ++GF++S++LTI+P +V+ +DK + I++ A+ Q +
Sbjct: 6 THGHGHDEHESHGSMKSYVIGFVISIVLTILPLVVVLND-MMDKTPTLIFILIMAVLQFV 64
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
V L FF+H+ + + +++MA+IF ++++ GS+W+M
Sbjct: 65 VQLFFFMHLREEKKPRYNVMALIFGLVILVTIIAGSIWIM 104
>gi|293607262|ref|ZP_06689603.1| cytochrome o ubiquinol oxidase subunit IV [Achromobacter piechaudii
ATCC 43553]
gi|292814354|gb|EFF73494.1| cytochrome o ubiquinol oxidase subunit IV [Achromobacter piechaudii
ATCC 43553]
Length = 116
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H+ + +G+ K ++GF+LSL+LT FG+VM G I + +V + Q++V
Sbjct: 9 HGHDDHAADHGSLKSYIIGFVLSLLLTFGSFGLVMHGAL-SHTITIIGVVALCVLQLLVQ 67
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LV+FLHM + E ++ A +FT++++AI GS WV+Y++N NM
Sbjct: 68 LVYFLHMGSSKESRDNLSAFVFTVLIIAIIVGGSAWVLYNMNVNM 112
>gi|294143095|ref|YP_003559073.1| cytochrome o ubiquinol oxidase subunit IV [Shewanella violacea
DSS12]
gi|7657998|dbj|BAA94867.1| quinol oxidase subunit V [Shewanella violacea]
gi|293329564|dbj|BAJ04295.1| cytochrome o ubiquinol oxidase, subunit IV [Shewanella violacea
DSS12]
Length = 111
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
+ + + + K LVGF+LS+ILT IPF VM F K I +++ A+ QI
Sbjct: 4 AHTSESLTSDDFMASVKSYLVGFLLSVILTGIPFWAVMTHHFE-KPITLGLVLVMAVVQI 62
Query: 62 IVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VHL +FLH+ E + + +FT +++ + S+W++Y N MM
Sbjct: 63 VVHLKYFLHLDFSKEGKINTFSFLFTALIMVMVMGLSVWIIYAANALMM 111
>gi|15596517|ref|NP_250011.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
PAO1]
gi|107100771|ref|ZP_01364689.1| hypothetical protein PaerPA_01001799 [Pseudomonas aeruginosa PACS2]
gi|116049272|ref|YP_791925.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152984607|ref|YP_001349424.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
PA7]
gi|218892575|ref|YP_002441444.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
LESB58]
gi|254239692|ref|ZP_04933014.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
2192]
gi|296390303|ref|ZP_06879778.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
PAb1]
gi|81541485|sp|Q9I424|CYOD_PSEAE RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD; AltName:
Full=Cytochrome o ubiquinol oxidase subunit IV
gi|9947258|gb|AAG04709.1|AE004561_5 cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
PAO1]
gi|115584493|gb|ABJ10508.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126193070|gb|EAZ57133.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
2192]
gi|150959765|gb|ABR81790.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
PA7]
gi|218772803|emb|CAW28588.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
LESB58]
Length = 111
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H+ + +G+ +GF+LS+ILT IPF +VM G F ++ LT+V+ + Q++VHL
Sbjct: 5 AHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGF-SRHATILTMVVLGLVQVVVHL 63
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
+ FLHM+ E W++MA IFT+I++ + S+W+++ + MM M
Sbjct: 64 ICFLHMNMSSEGRWNVMAFIFTVIVILLVVGLSLWIIFSADMLMMPMP 111
>gi|121602245|ref|YP_989521.1| cytochrome o ubiquinol oxidase, subunit IV [Bartonella
bacilliformis KC583]
gi|120614422|gb|ABM45023.1| cytochrome o ubiquinol oxidase, subunit IV [Bartonella
bacilliformis KC583]
Length = 123
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 2 KYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIA 59
+++ H+ + + LVGF+L++I T F VM G I I + AI
Sbjct: 3 EHNETHDP------SIRSYLVGFVLAVIFTFCSFIPVMYGMLEGWAISTKVIYLIGMAII 56
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
QIIV ++FFLH+++ + W+ +A+ F + V I G+ W + HLN NMM
Sbjct: 57 QIIVQIIFFLHLNSGPDAKWNFVALWFAVTCVTIIIGGTWWAISHLNYNMM 107
>gi|260459333|ref|ZP_05807588.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium
opportunistum WSM2075]
gi|259034887|gb|EEW36143.1| cytochrome o ubiquinol oxidase subunit IV [Mesorhizobium
opportunistum WSM2075]
Length = 136
Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
G ++G+ L+++LTI F + + + +V+ A+AQ+ VHLVFFLH++T
Sbjct: 31 GGLLGYVIGYGLAILLTIASFLAAQTD-LIYQPAVISALVVLAVAQMGVHLVFFLHLTTG 89
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
++ +I+A+ F +++VA+ +GS+W+M HLN NM +M
Sbjct: 90 PDNTNNILALAFGVLIVALVVLGSVWIMAHLNENMAAM 127
>gi|323529725|ref|YP_004231877.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1001]
gi|323386727|gb|ADX58817.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1001]
Length = 110
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
++G+ + + GF+LS+ LT F +VM+G F + M V A QI+VHL FF
Sbjct: 8 SADSNHGSVRGYVCGFVLSVALTAAAFWLVMRGAFPAQTAMIALSV-LAFVQIVVHLAFF 66
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
LH+ W++MA+ +T + G++WVM++++ NMMS
Sbjct: 67 LHVDMSARQRWNVMALAYTALAALFLIGGTVWVMHNVSMNMMS 109
>gi|239906128|ref|YP_002952867.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio magneticus
RS-1]
gi|239795992|dbj|BAH74981.1| cytochrome o ubiquinol oxidase subunit IV [Desulfovibrio magneticus
RS-1]
Length = 107
Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + N GT K +GF S++LT++ FG+VM G + + L + A+ Q
Sbjct: 1 MSHSPTDNAGAAV-GTVKSYALGFAASVVLTLVSFGLVMGGAL-PRLPLILALFALAVIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+ V L +FLH+ W++MA++FT ++ + GS+W+MY L+ M
Sbjct: 59 LFVQLRYFLHVDRSSAMYWNLMALLFTFFLMFLFIGGSIWIMYGLHERM 107
>gi|300690265|ref|YP_003751260.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum
PSI07]
gi|299077325|emb|CBJ49951.1| cytochrome o ubiquinol oxidase, subunit IV [Ralstonia solanacearum
PSI07]
Length = 121
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T K L+GF+L++ILT+IPF +VM G F ++ T++ A+ QI+VHL++FLH+
Sbjct: 26 TVKGYLIGFVLAVILTVIPFKMVMGGGFSHGTVLV-TVMALAVVQIVVHLIYFLHLDGSS 84
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
W++MA +FT++++AI VGS+WVM+++
Sbjct: 85 SQRWNVMAFLFTLLILAIVIVGSLWVMHNM 114
>gi|187477294|ref|YP_785318.1| cytochrome O ubiquinol oxidase subunit IV [Bordetella avium 197N]
gi|115421880|emb|CAJ48399.1| cytochrome O ubiquinol oxidase subunit IV [Bordetella avium 197N]
Length = 113
Score = 91.4 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M + +G+ K ++GFILS+ILT+ F +VM G F + ++ I++ + Q
Sbjct: 1 MSAHHDAAHADGGHGSLKSYIIGFILSIILTLGSFWLVMNGTF-SRPLVLGGILVLCVVQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
++V LVFF+HM T + ++ A +FT++++AI GS+WV++++N NM+
Sbjct: 60 LLVQLVFFMHMGTAKSEQDNLSAFLFTVMIIAIIVGGSIWVLHNMNANML 109
>gi|170692897|ref|ZP_02884059.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia graminis
C4D1M]
gi|170142553|gb|EDT10719.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia graminis
C4D1M]
Length = 110
Score = 91.0 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
+G+ + L GF+LS++LT F +VM G F + M + + A QI+VHLVFF
Sbjct: 8 SADQGHGSLRGYLAGFVLSVVLTAAAFWLVMHGAFPAQTAMIA-LSVLAFVQIVVHLVFF 66
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
LH+ W++MA+ +T + G++WVM++++ NMMS
Sbjct: 67 LHIDMSAGQRWNVMALAYTALAALFLIGGTVWVMHNVSMNMMS 109
>gi|295701244|ref|YP_003610245.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1002]
gi|295441567|gb|ADG20734.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1002]
Length = 108
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
S+G+ + L GF LS++LT FG+ + D + I + Q++VHLV FLH
Sbjct: 8 AGSHGSLTRYLAGFFLSVLLTAGAFGVGLYDAI-DATTAMIAIAVLGFLQVVVHLVCFLH 66
Query: 71 MSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++ GW+++++ +TI+ A +G++WVM ++ MMS
Sbjct: 67 LTLSPGQGWNVLSLCYTILAAAFLILGTVWVMRNVEMLMMS 107
>gi|319405035|emb|CBI78645.1| cytochrome o ubiquinol oxidase subunit IV (fragment) [Bartonella
sp. AR 15-3]
Length = 135
Score = 90.6 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTI--VLCAIAQIIVHLVFFLHMST 73
LVGFILS++ T+ F VM G I I + A+ QII+ +VFFLH+S+
Sbjct: 11 GIGSYLVGFILSVLFTLGSFIPVMYGLLDSWAISTKVIYLIGMALIQIIIQIVFFLHLSS 70
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W++ A++F + V I G+ W + HLN NMM
Sbjct: 71 GPDAKWNLAALLFAAMCVFIIIGGTWWAISHLNYNMM 107
>gi|307725994|ref|YP_003909207.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1003]
gi|307586519|gb|ADN59916.1| cytochrome o ubiquinol oxidase subunit IV [Burkholderia sp.
CCGE1003]
Length = 110
Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
+G+ + GF+LS++LT F +VM+G + M + + A QI+VHLVFF
Sbjct: 8 SAESGHGSTGGYVCGFVLSVVLTAAAFWLVMRGALPAQTAMIA-LSVLAFVQIVVHLVFF 66
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
LH+ W++MA+ +T + G++WVM++++ NMMS
Sbjct: 67 LHIDMSAGQRWNVMALAYTALAALFLIGGTVWVMHNVSMNMMS 109
>gi|317403853|gb|EFV84327.1| cytochrome o ubiquinol oxidase subunit IV [Achromobacter
xylosoxidans C54]
Length = 116
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H+ + +G+ K ++GF+LSL+LT FG+VM G I + +V + Q++V
Sbjct: 9 HGHDDHAADHGSLKSYIIGFVLSLLLTFGSFGLVMSGAL-SHTITIIGVVALCVLQLLVQ 67
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LV+FLHM ++ +FT++++AI GS WV+Y++N NM
Sbjct: 68 LVYFLHMGASKSARDNLATFVFTVMIIAIIVGGSAWVLYNMNVNM 112
>gi|313106309|ref|ZP_07792553.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
39016]
gi|310879055|gb|EFQ37649.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas aeruginosa
39016]
Length = 111
Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H+ + +G+ +GF+LS+ILT IPF +VM G F ++ LT+V+ + Q++VHL
Sbjct: 5 AHDNHGAGHGSLGSYAIGFVLSVILTAIPFYMVMDGGF-SRHATILTMVVLGLVQVVVHL 63
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSME 113
+ FLHM+ E W++MA IF +I++ + S+W+++ + MM M
Sbjct: 64 ICFLHMNMSSEGRWNVMAFIFMVIVILLVVGLSLWIIFSADMLMMPMP 111
>gi|33519707|ref|NP_878539.1| cytochrome O ubiquinol oxidase subunit CyoD [Candidatus Blochmannia
floridanus]
gi|33504052|emb|CAD83313.1| cytochrome O ubiquinol oxidase subunit CyoD [Candidatus Blochmannia
floridanus]
Length = 100
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K +GFILSLI TIIPF I+ F + + ++ CAI QI +HL++FLH++
Sbjct: 7 IKHYCIGFILSLIFTIIPFYIIQHNCFE-QQTSYIIVIFCAITQIYIHLIYFLHLNQISN 65
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
W+++++IFT +V I GS+W+M HL++N+MS
Sbjct: 66 QMWNVISLIFTTFIVLILITGSIWIMTHLHHNLMS 100
>gi|311108452|ref|YP_003981305.1| cytochrome O ubiquinol oxidase subunit IV 1 [Achromobacter
xylosoxidans A8]
gi|310763141|gb|ADP18590.1| cytochrome O ubiquinol oxidase subunit IV 1 [Achromobacter
xylosoxidans A8]
Length = 116
Score = 88.7 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ H+ + +G+ K ++GF+LSL+LT FG+VM G I + +V + Q++V
Sbjct: 9 HGHDDHAADHGSLKSYIIGFVLSLLLTFGSFGLVMNGGL-SHTITIIGVVALCVLQLLVQ 67
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LV+FLHM ++ +FT+++++I GS WV+Y++N NM
Sbjct: 68 LVYFLHMGASKSARDNLATFVFTLMIISIIVGGSAWVLYNMNVNM 112
>gi|226310782|ref|YP_002770676.1| quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599]
gi|226093730|dbj|BAH42172.1| quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599]
Length = 105
Score = 88.3 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M H + HS+G+ K+ ++GFILS++LTIIP +VM L K + I++ A+ Q
Sbjct: 1 MAQHQNHGGH-HSHGSMKEYVIGFILSIVLTIIPLVLVMN-SILSKTATMIAILVMAVLQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
++ LVFF+H+ + +++ +I +++V GS+W+M
Sbjct: 59 FVIQLVFFMHIREGEKPRYNVQTLILGLVIVITIVAGSLWIM 100
>gi|57340142|gb|AAW50058.1| hypothetical protein FTT0284 [synthetic construct]
Length = 145
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+
Sbjct: 27 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAVLAVV 85
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
Q+ V LVFFLH+ST + W++++ IF II+V I G+MW+M+ L + MM +
Sbjct: 86 QLFVQLVFFLHLSTDSKARWNLVSAIFAIIVVVIVVAGTMWIMFDLYDMMMYPYDVP 142
>gi|110635861|ref|YP_676069.1| cytochrome C oxidase subunit IV [Mesorhizobium sp. BNC1]
gi|110286845|gb|ABG64904.1| cytochrome bo3 quinol oxidase subunit 4 [Chelativorans sp. BNC1]
Length = 103
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ Q L GF+L+L+LT IPF IV G + + + A+ Q+ VHL +FLHM+
Sbjct: 10 SLTQYLTGFVLALVLTAIPFAIVATGAA-PRAQSLAVVTVAAVVQVFVHLWYFLHMNFST 68
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+I+A F I++ I GS W+M+ L++ M
Sbjct: 69 TPRENILAFAFAAILILIMLGGSFWIMFDLHSRM 102
>gi|209363942|ref|YP_002268300.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii Dugway
5J108-111]
gi|212212544|ref|YP_002303480.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii
CbuG_Q212]
gi|212218407|ref|YP_002305194.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii
CbuK_Q154]
gi|215919090|ref|YP_002332979.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii RSA 493]
gi|206583975|gb|ACI15270.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii RSA 493]
gi|207081875|gb|ACI23138.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii Dugway
5J108-111]
gi|212010954|gb|ACJ18335.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii
CbuG_Q212]
gi|212012669|gb|ACJ20049.1| cytochrome O ubiquinol oxidase protein [Coxiella burnetii
CbuK_Q154]
Length = 111
Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 9 MNMHSYGTKKQ----CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
++ SYGT K+ +VG IL +ILT++ F VM F + I + A+ Q IV
Sbjct: 5 LSEESYGTGKKKLSIYIVGMILCVILTLVSFMTVMYSAFPP-TTLVAIIFVSALIQFIVQ 63
Query: 65 LVFFLHMSTKVED-GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+V FL ++ K E ++M+ IFTI+++ + GS+W+M+ L+ MM
Sbjct: 64 VVCFLRLNAKNEQSRMNLMSFIFTIVILFVLIGGSLWIMWSLHYRMM 110
>gi|146339413|ref|YP_001204461.1| cytochrome O ubiquinol oxidase protein subunit IV [Bradyrhizobium
sp. ORS278]
gi|146192219|emb|CAL76224.1| Cytochrome O ubiquinol oxidase protein subunit IV [Bradyrhizobium
sp. ORS278]
Length = 135
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 31 TIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIM 90
T F I +I IV AIAQ+ VHLVFFLH++T ++ +++A+ F +I+
Sbjct: 47 TATSFFIAGTHLVWRPSIPVALIV-LAIAQMGVHLVFFLHITTGPDNTNNVLALAFGLII 105
Query: 91 VAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
V + GS+W+M +LN+NMM M + +
Sbjct: 106 VVLVVGGSLWIMANLNHNMMPMTQLMQMQ 134
>gi|329296774|ref|ZP_08254110.1| Cytochrome o ubiquinol oxidase protein cyoD [Plautia stali
symbiont]
Length = 91
Score = 85.6 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80
++GFILS+ILT IPF +VM G I+ + +V + ++VHLV+FLH+ +K E GW+
Sbjct: 1 MIGFILSIILTAIPFWMVMDGSASHGTILGVVLVCAVVQ-VLVHLVYFLHLDSKSEGGWN 59
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++A++F+ +++ I +GS+W+M++LN NMM+
Sbjct: 60 MVAIVFSAVIILIVVIGSLWIMWNLNYNMMA 90
>gi|238791422|ref|ZP_04635060.1| hypothetical protein yinte0001_25730 [Yersinia intermedia ATCC
29909]
gi|238729038|gb|EEQ20554.1| hypothetical protein yinte0001_25730 [Yersinia intermedia ATCC
29909]
Length = 84
Score = 85.2 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 29 ILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTI 88
ILT+IPF +VM G + T+V A+ QIIVHLV+FLHM+ E+ W+++A +FT
Sbjct: 2 ILTVIPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSEERWNLVAFLFTA 60
Query: 89 IMVAICFVGSMWVMYHLNNNMM 110
+++AI VGS+W+MY+LN NMM
Sbjct: 61 MIIAIVVVGSLWIMYNLNINMM 82
>gi|149189685|ref|ZP_01867967.1| hypothetical protein VSAK1_06650 [Vibrio shilonii AK1]
gi|148836497|gb|EDL53452.1| hypothetical protein VSAK1_06650 [Vibrio shilonii AK1]
Length = 103
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK-VED 77
+ GF +L+LT++PF +V + + CAI Q+ VH +FLHM K +
Sbjct: 11 DYIKGFCAALVLTVVPFYLVWAQSL-PASTTYFVLFACAIVQVFVHFKYFLHMEAKTSDG 69
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHL 105
W++++++FTI++V I GS+W+MY++
Sbjct: 70 QWNLVSLLFTIVVVFILIAGSLWIMYNM 97
>gi|209808983|ref|YP_002264521.1| cytochrome o ubiquinol oxidase subunit CyoD [Aliivibrio salmonicida
LFI1238]
gi|208010545|emb|CAQ80914.1| cytochrome o ubiquinol oxidase subunit CyoD [Aliivibrio salmonicida
LFI1238]
Length = 109
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
K + GFI SLILT+IPF G + + + ++L AIAQ++VHL +FLHM + +
Sbjct: 17 KGYITGFIASLILTMIPFYFAYTGVL-SREVTIVVLILSAIAQLVVHLFYFLHMDSTEKG 75
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHL 105
+++++ +FT ++V I GS+W+M++L
Sbjct: 76 RFNMLSFVFTAVIVFIVIAGSIWIMWNL 103
>gi|49473795|ref|YP_031837.1| cytochrome o ubiquinol oxidase subunit IV [Bartonella quintana str.
Toulouse]
gi|49239298|emb|CAF25624.1| Cytochrome o ubiquinol oxidase subunit IV [Bartonella quintana str.
Toulouse]
Length = 168
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 8 NMNMHSY-GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIM--CLTIVLCAIAQIIVH 64
+M+ ++ + VGFIL++ T+ F VM G I ++ AI QIIV
Sbjct: 2 SMHNETHIPSTSSYFVGFILAVFFTLGSFIPVMYGMMESWAISTKVAYLIGMAIIQIIVQ 61
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+VFFLH++ + W++ A+ F I V + G+ W + HLN NMM
Sbjct: 62 IVFFLHLNAGPDAKWNLSALWFAAICVFVIIGGTWWAISHLNYNMM 107
>gi|21623361|gb|AAM67996.1| cytochrome o ubiquinol oxidase D [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 123
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
K +VGF+ SL LTIIPF + F + I I+LCA++QII+H ++FLH+ ++
Sbjct: 31 KSYIVGFLFSLFLTIIPFFCTLNHLF-SRKINFFVILLCALSQIIIHFIYFLHLDFSKKN 89
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
W+I++++F +I+V I GS+W+MY+LN++
Sbjct: 90 SWNIISLLFILIIVFIIVFGSIWIMYNLNHH 120
>gi|114330709|ref|YP_746931.1| cytochrome C oxidase subunit IV [Nitrosomonas eutropha C91]
gi|114307723|gb|ABI58966.1| cytochrome bo3 quinol oxidase subunit 4 [Nitrosomonas eutropha C91]
Length = 116
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ GF L+L LT++PF +V ++ + +TI + A+ Q +VH +FLH+ K +
Sbjct: 25 SYMWGFGLALGLTLVPFALVQWQAMA-RDPLLITIAVLALVQTVVHFRYFLHLDRKRK-R 82
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
++ ++F+ ++ I G++W+M +L M +
Sbjct: 83 EDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI 116
>gi|260430480|ref|ZP_05784453.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45]
gi|260418509|gb|EEX11766.1| cytOchrome o ubiquinol oxidase subunit IV [Citreicella sp. SE45]
Length = 99
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
+ LVGF L+L LT++PF +V G + + +TI + A+AQI VHL FFLH+ +
Sbjct: 9 RMYLVGFGLALTLTLVPFALVHWGLMQGR-TLAITIAVLAVAQIAVHLRFFLHIDLSRQK 67
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+ ++FT++++AI G++W+M +L M
Sbjct: 68 REDLQLILFTVLLLAIMAFGTLWIMGNLATRM 99
>gi|226314759|ref|YP_002774655.1| quinol oxidase polypeptide IV [Brevibacillus brevis NBRC 100599]
gi|226097709|dbj|BAH46151.1| probable quinol oxidase polypeptide IV [Brevibacillus brevis NBRC
100599]
Length = 105
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
+ +G+ K ++GF+LSLI TIIP + ++ +LD + + + A+ Q IV
Sbjct: 2 HGTTEQHGGHGSLKSYVIGFVLSLIFTIIP-ILALENGWLDSDKRLIIYLGAALFQFIVQ 60
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
L FF+H+ + + +++M+++ + +V + +GS+W+M
Sbjct: 61 LFFFMHLKEEDKPRYNLMSLLLGLFIVFLIVIGSIWIM 98
>gi|54296268|ref|YP_122637.1| cytochrome o ubiquinol oxidase subunit IV [Legionella pneumophila
str. Paris]
gi|53750053|emb|CAH11445.1| Cytochrome o ubiquinol oxidase subunit IV [Legionella pneumophila
str. Paris]
Length = 112
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 1 MKYDNIHNMNMHSYGTKKQ----CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLC 56
M++ H + YGT ++ LVGFI LT+ F +VM F K + I
Sbjct: 1 MEH---HGIKEPDYGTGQKKLGLYLVGFISCTFLTLFSFWVVMSHIF-SKTEVLTLIFSS 56
Query: 57 AIAQIIVHLVFFLHMSTKVED-GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
A Q +V ++ FL +ST+ + ++M +FT +++ +GS+W+M++LN M
Sbjct: 57 ACIQFLVQVICFLRLSTQTQQGRTNVMTFLFTGVILTSIILGSLWIMWNLNYYM 110
>gi|30410824|ref|NP_660785.2| cytochrome O ubiquinol oxidase D [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008334|sp|Q8K996|CYOD_BUCAP RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD
Length = 108
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
K +VGF+ SL LTIIPF + F + I I+LCA++QII+H ++FLH+ ++
Sbjct: 16 KSYIVGFLFSLFLTIIPFFCTLNHLF-SRKINFFVILLCALSQIIIHFIYFLHLDFSKKN 74
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
W+I++++F +I+V I GS+W+MY+LN++
Sbjct: 75 SWNIISLLFILIIVFIIVFGSIWIMYNLNHH 105
>gi|328675366|gb|AEB28041.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella cf. novicida
3523]
Length = 110
Score = 83.7 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+
Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFALVGFKLLSP-VALCVTVAVLAVV 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+ V LVFFLH+ST + W++++ IF II+V I G+MW+M+ L + MM
Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIIVVIIVVAGTMWIMFDLYDMMM 110
>gi|319760377|ref|YP_004124315.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia
vafer str. BVAF]
gi|318039091|gb|ADV33641.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia
vafer str. BVAF]
Length = 100
Score = 83.7 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ +GF+LSLILTIIPF + F DK I+ + + CA+ QI +HLV+FLH+
Sbjct: 6 SNTSYFIGFVLSLILTIIPFYTIQYNIF-DKKILLIITISCALIQIYIHLVYFLHLIHIS 64
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W I ++IFTI +V I +GS+W+M HL++N+M
Sbjct: 65 DRKWIITSLIFTIFIVFILVLGSVWIMTHLHHNLM 99
>gi|162147816|ref|YP_001602277.1| cytochrome o ubiquinol oxidase protein cyoD [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542439|ref|YP_002274668.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786393|emb|CAP55975.1| putative cytochrome o ubiquinol oxidase protein cyoD
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530116|gb|ACI50053.1| cytochrome o ubiquinol oxidase subunit IV [Gluconacetobacter
diazotrophicus PAl 5]
Length = 110
Score = 83.3 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 20 CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGW 79
L GF++S++LT FG+VM F I + A Q++VHLVFFLHM+T E W
Sbjct: 19 YLTGFVISVVLTAAAFGVVMAHSFSPSG-TIAAIAILAAVQVVVHLVFFLHMNTSSEQRW 77
Query: 80 SIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS 111
++MA +FT+ V I VG++++M+ NMMS
Sbjct: 78 NVMAFVFTVTAVLILIVGTVFIMHDTAINMMS 109
>gi|157694209|ref|YP_001488671.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus pumilus
SAFR-032]
gi|157682967|gb|ABV64111.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus pumilus
SAFR-032]
Length = 126
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H+ H + K +VGFILS++LT++ F I + G + + I A Q + L
Sbjct: 5 THSSAEHEHFPWK-HVVGFILSIVLTVLAFWIAI-GAEIGSSAKLWIIFGFAFIQAFLQL 62
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
F+HM+ + +F + I +GS+W+
Sbjct: 63 FMFMHMTESENGTVQVGNTLFGLFCAIIFVIGSVWIF 99
>gi|304407875|ref|ZP_07389526.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus
curdlanolyticus YK9]
gi|304343358|gb|EFM09201.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus
curdlanolyticus YK9]
Length = 109
Score = 82.9 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K ++GFI+S++LTIIP +VM + KN + I++ A+ Q V L FF+H+
Sbjct: 17 SLKSYVIGFIMSIVLTIIPLVVVMND-MMSKNGTIVLILILAVLQFAVQLWFFMHLKEGE 75
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVM 102
W+I A++F I+++ + GS+W+M
Sbjct: 76 NAKWNIAALLFAILILVVVVAGSIWIM 102
>gi|71892023|ref|YP_277753.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796129|gb|AAZ40880.1| cytochrome o ubiquinol oxidase, subunit IV [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 100
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T+K L+GF+LSL+LTI+PF +V K ++ + + C+I QII+HL+FFLH+
Sbjct: 6 TQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVF-CSIMQIIIHLIFFLHLGNVS 64
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
W+++++IFTI +V I +GS+W+M HL++N+M
Sbjct: 65 NQAWNLISLIFTIFIVFILVLGSVWIMTHLHHNLM 99
>gi|254368561|ref|ZP_04984577.1| hypothetical protein FTAG_01545 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121464|gb|EDO65655.1| hypothetical protein FTAG_01545 [Francisella tularensis subsp.
holarctica FSC022]
Length = 110
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+
Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAVLAVV 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+ V LVFFLH+ST + W++++ IF I++V I G+MW+M+ L + MM
Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIVVVVIVVAGTMWIMFDLYDMMM 110
>gi|56707438|ref|YP_169334.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110669909|ref|YP_666466.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis FSC198]
gi|118496812|ref|YP_897862.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. novicida U112]
gi|134302622|ref|YP_001122593.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis WY96-3418]
gi|187932181|ref|YP_001892166.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. mediasiatica FSC147]
gi|194324507|ref|ZP_03058279.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. novicida FTE]
gi|208780573|ref|ZP_03247912.1| cytochrome o ubiquinol oxidase subunit IV [Francisella novicida
FTG]
gi|224456518|ref|ZP_03664991.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254370869|ref|ZP_04986874.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. tularensis FSC033]
gi|254372176|ref|ZP_04987668.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. novicida GA99-3549]
gi|254373657|ref|ZP_04989141.1| cytochrome O ubiquinol oxidase subunit IV [Francisella novicida
GA99-3548]
gi|254874275|ref|ZP_05246985.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. tularensis MA00-2987]
gi|54113735|gb|AAV29501.1| NT02FT0909 [synthetic construct]
gi|56603930|emb|CAG44917.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320242|emb|CAL08300.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis FSC198]
gi|118422718|gb|ABK89108.1| cytochrome bo terminal oxidase subunit IV [Francisella novicida
U112]
gi|134050399|gb|ABO47470.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151569112|gb|EDN34766.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. tularensis FSC033]
gi|151569906|gb|EDN35560.1| cytochrome O ubiquinol oxidase subunit IV [Francisella novicida
GA99-3549]
gi|151571379|gb|EDN37033.1| cytochrome O ubiquinol oxidase subunit IV [Francisella novicida
GA99-3548]
gi|187713090|gb|ACD31387.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. mediasiatica FSC147]
gi|194321342|gb|EDX18828.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. novicida FTE]
gi|208743548|gb|EDZ89853.1| cytochrome o ubiquinol oxidase subunit IV [Francisella novicida
FTG]
gi|254840274|gb|EET18710.1| cytochrome bo terminal oxidase subunit IV [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282158580|gb|ADA77971.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. tularensis NE061598]
gi|328676274|gb|AEB27144.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella cf. novicida
Fx1]
Length = 110
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+
Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAVLAVV 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+ V LVFFLH+ST + W++++ IF II+V I G+MW+M+ L + MM
Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIIVVVIVVAGTMWIMFDLYDMMM 110
>gi|89255628|ref|YP_512989.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica LVS]
gi|115314132|ref|YP_762855.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica OSU18]
gi|156501577|ref|YP_001427642.1| cytochrome C oxidase/ubiquinol oxidase subunit IV [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167009930|ref|ZP_02274861.1| cytOchrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica FSC200]
gi|254367022|ref|ZP_04983058.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica 257]
gi|290953473|ref|ZP_06558094.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica URFT1]
gi|295313271|ref|ZP_06803908.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica URFT1]
gi|89143459|emb|CAJ78635.1| Cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica LVS]
gi|115129031|gb|ABI82218.1| cytochrome o ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica OSU18]
gi|134252848|gb|EBA51942.1| cytochrome O ubiquinol oxidase subunit IV [Francisella tularensis
subsp. holarctica 257]
gi|156252180|gb|ABU60686.1| cytochrome C oxidase/ubiquinol oxidase subunit IV [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 110
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 1 MKYDNIHNMN-MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIA 59
M +++++ + +YGT K + GF+LS+++T I F +V +C+T+ + A+
Sbjct: 1 MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSP-VALCVTVAILAVV 59
Query: 60 QIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
Q+ V LVFFLH+ST + W++++ IF I++V I G+MW+M+ L + MM
Sbjct: 60 QLFVQLVFFLHLSTDSKARWNLVSAIFAIVVVVIVVAGTMWIMFDLYDMMM 110
>gi|238759271|ref|ZP_04620438.1| hypothetical protein yaldo0001_8190 [Yersinia aldovae ATCC 35236]
gi|238702558|gb|EEP95108.1| hypothetical protein yaldo0001_8190 [Yersinia aldovae ATCC 35236]
Length = 80
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 33 IPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVA 92
IPF +VM G + T+V A+ QIIVHLV+FLHM+ K E+ W+++A +FT +++A
Sbjct: 2 IPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGKSEERWNLVAFLFTAMIIA 60
Query: 93 ICFVGSMWVMYHLNNNMM 110
I VGS+W+MY+LN NMM
Sbjct: 61 IVVVGSLWIMYNLNINMM 78
>gi|218514775|ref|ZP_03511615.1| putative cytochrome o ubiquinol oxidase protein CyoD [Rhizobium
etli 8C-3]
Length = 91
Score = 81.4 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ + H +GT K + GF+LS+ILT IPF +VM G + + ++ QI+
Sbjct: 16 HGHSHGHQA-GHGTFKSYMAGFVLSVILTAIPFWLVMSGVIASPALTAVLVMGLGAVQIV 74
Query: 63 VHLVFFLHMSTKVEDG 78
VH++FFLHM+T+
Sbjct: 75 VHMIFFLHMNTRERGR 90
>gi|194016546|ref|ZP_03055160.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus pumilus ATCC
7061]
gi|194012019|gb|EDW21587.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus pumilus ATCC
7061]
Length = 126
Score = 81.0 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 6 IHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
++ H + K +VGFILS++LTI+ F I + G + + I A Q + L
Sbjct: 5 TNSSAEHEHFPWK-HVVGFILSIVLTILAFWIAI-GAEIGSSAKLWIIFGFAFIQAFLQL 62
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
F+HM+ + +F + I +GS+W+
Sbjct: 63 FMFMHMTESENGTVQVGNTLFGLFCAIIFVIGSVWIF 99
>gi|238783618|ref|ZP_04627639.1| hypothetical protein yberc0001_14010 [Yersinia bercovieri ATCC
43970]
gi|238715496|gb|EEQ07487.1| hypothetical protein yberc0001_14010 [Yersinia bercovieri ATCC
43970]
Length = 80
Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 33 IPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVA 92
IPF +VM G + T+V A+ QIIVHLV+FLHM+ E+ W+++A +FT +++A
Sbjct: 2 IPFAMVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSEERWNLVAFLFTAMIIA 60
Query: 93 ICFVGSMWVMYHLNNNMM 110
I VGS+W+MY+LN NMM
Sbjct: 61 IVVVGSLWIMYNLNINMM 78
>gi|254472570|ref|ZP_05085969.1| cytochrome o ubiquinol oxidase subunit IV [Pseudovibrio sp. JE062]
gi|211958034|gb|EEA93235.1| cytochrome o ubiquinol oxidase subunit IV [Pseudovibrio sp. JE062]
Length = 99
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
M+ S+ + K+ + GFIL+L LT+IPF V F + I LCA+ Q+ VHL +F
Sbjct: 1 MHPQSH-SAKRLITGFILALALTLIPFAAVWTMAF-PVELTFGIIALCALVQVGVHLHYF 58
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
L + ++ +++AM F +++ + G++W+M+ L MM
Sbjct: 59 LGIDSRT-PIENVLAMSFAGVLIFLMVGGTLWIMFDLYERMM 99
>gi|254488164|ref|ZP_05101369.1| cytochrome o ubiquinol oxidase subunit IV [Roseobacter sp. GAI101]
gi|214045033|gb|EEB85671.1| cytochrome o ubiquinol oxidase subunit IV [Roseobacter sp. GAI101]
Length = 103
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ GF L++ LT + F + F + T+ + AIAQ++VH FFLH+ +
Sbjct: 11 LRMYFTGFGLAVTLTALSFLTAILQPFGPVG-LFATLAVLAIAQVVVHFRFFLHIDLSRQ 69
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ ++FT +++AI G++W++ L MM
Sbjct: 70 AREDLQLILFTGLLIAIMVAGTIWILGDLMTRMM 103
>gi|85717119|ref|ZP_01048079.1| Cytochrome C oxidase subunit IV [Nitrobacter sp. Nb-311A]
gi|85696079|gb|EAQ33977.1| Cytochrome C oxidase subunit IV [Nitrobacter sp. Nb-311A]
Length = 102
Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K LVG +L+ +LT IPFG V + I + A+AQ++VHL +FL + K
Sbjct: 2 LKSYLVGVLLASVLTAIPFGFVATRTLPPGQTLI-VIGVAAVAQVVVHLRYFLRLDLKSR 60
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYH 104
+A+ F ++ I G++W+M+
Sbjct: 61 SQDKFIALCFAATVLFILVGGTLWIMFD 88
>gi|118591209|ref|ZP_01548608.1| Prokaryotic Cytochrome C oxidase subunit IV [Stappia aggregata IAM
12614]
gi|118436285|gb|EAV42927.1| Prokaryotic Cytochrome C oxidase subunit IV [Stappia aggregata IAM
12614]
Length = 101
Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
MN + + L GF+L+++LT IPF +V G + + V + +IVHLVFF
Sbjct: 1 MNHSAERSLSTYLTGFVLAVLLTAIPFALVWGGLLAGSAVYAVIAVAAVLQ-VIVHLVFF 59
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
LH+ K ++ + F +++ I GS+W+M L++ M
Sbjct: 60 LHIDLKSTPAENLFFLAFAAVLIFIMVGGSLWIMMDLHHRM 100
>gi|296284679|ref|ZP_06862677.1| hypothetical protein CbatJ_13713 [Citromicrobium bathyomarinum
JL354]
Length = 132
Score = 77.9 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ ++ + GF++SL+LT+ F ++ L I A+ QI+ HL
Sbjct: 10 DPQGNAASEIRSYATGFVISLLLTVGAFAALLSD--LPTTWKIALICGAALIQIVAHLRN 67
Query: 68 FLHMSTKVEDG-WSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
FLH+S ++ ++F++ ++AI G+ ++M L M
Sbjct: 68 FLHLSLADAQSEEDLLLVLFSVCLLAIMAGGTWYIMSDLGGRM 110
>gi|94495037|ref|ZP_01301618.1| cytochrome o ubiquinol oxidase, subunit IV [Sphingomonas sp. SKA58]
gi|94425303|gb|EAT10323.1| cytochrome o ubiquinol oxidase, subunit IV [Sphingomonas sp. SKA58]
Length = 103
Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ LVG+ ++++T + F IV K + ++ A QI++ FLH+S +
Sbjct: 11 VRSYLVGYAGAIVMTGVAFAIVQWPIASPK-LTFAAVLTLAFTQIVLQFRCFLHISLRRS 69
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ ++F+ ++VA+ G++ ++ +L MM
Sbjct: 70 ARDDLQLILFSTLVVALMVGGTLVILLNLRERMM 103
>gi|255019614|ref|ZP_05291695.1| hypothetical protein ACA_2321 [Acidithiobacillus caldus ATCC 51756]
gi|254970958|gb|EET28439.1| hypothetical protein ACA_2321 [Acidithiobacillus caldus ATCC 51756]
Length = 121
Score = 77.1 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+ N +++ L GFIL+ +L + +V ++ I+ CA +I
Sbjct: 5 HANPIEHPEVQMASRRGYLTGFILASVLMALATFLVSSHALPPFALLLA-IMACAGFAVI 63
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMS-MEGMRSIH 119
+ F LH+ + W+ +A++ + + I + W+ L M + GM +H
Sbjct: 64 AQVYFLLHIDISEHNIWNTVALVAFVPLFVITIGLTWWMFSQLYLRTMPSIPGMPGMH 121
>gi|32490899|ref|NP_871153.1| hypothetical protein WGLp150 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166105|dbj|BAC24296.1| cyoD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 109
Score = 76.7 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 57/93 (61%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
K +G+ILS T IPF +++ + L ++ I++CA +Q I+ FFL++
Sbjct: 17 KSYFIGYILSFFFTCIPFLLIINKWNLYNELIYNLIIICAFSQAIIQFTFFLNIFDNSRI 76
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
W ++++ FTI+++ I GS+W+M HL++N+M
Sbjct: 77 NWKLISLTFTILIIFILIFGSIWIMNHLHHNLM 109
>gi|332187380|ref|ZP_08389118.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17]
gi|332012541|gb|EGI54608.1| cytochrome o ubiquinol oxidase subunit IV [Sphingomonas sp. S17]
Length = 127
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 1 MKYDNIHNMNMHSY----GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLC 56
M D + G + ++G + +LT F +V + ++
Sbjct: 9 MARDETAPGEESEHDSIAGGVRSYVIGLAAAAVLTAASFALVQMDIIWGPAV-PAALLAL 67
Query: 57 AIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGMR 116
AI Q+ VHLVFFLH++T ++ +++A++F +++V + +GS+W+M HLN+N+M
Sbjct: 68 AIGQMGVHLVFFLHITTGPDNSNNVLALLFGVLIVTLVLLGSIWIMGHLNHNLMGPMATP 127
>gi|238795551|ref|ZP_04639066.1| hypothetical protein ymoll0001_11420 [Yersinia mollaretii ATCC
43969]
gi|238720670|gb|EEQ12471.1| hypothetical protein ymoll0001_11420 [Yersinia mollaretii ATCC
43969]
Length = 75
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 37 IVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFV 96
+VM G + T+V A+ QIIVHLV+FLHM+ E+ W+++A +FT +++AI V
Sbjct: 1 MVMSGTA-SHTTILATVVGLAVVQIIVHLVYFLHMNGSSEERWNLVAFLFTAMIIAIVVV 59
Query: 97 GSMWVMYHLNNNMM 110
GS+W+MY+LN NMM
Sbjct: 60 GSLWIMYNLNINMM 73
>gi|294851454|ref|ZP_06792127.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|294820043|gb|EFG37042.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
Length = 73
Score = 75.6 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 48/66 (72%)
Query: 51 LTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ ++ A QI+VHL++FLH+ K E GW+++A++FT I++AI +GS+W+MYHL+ NMM
Sbjct: 1 MIVLAIAAVQILVHLIYFLHLDPKSEGGWNMLALVFTGIILAIVLIGSIWIMYHLDTNMM 60
Query: 111 SMEGMR 116
M
Sbjct: 61 PMYMTP 66
>gi|27377828|ref|NP_769357.1| cytochrome O ubiquinol oxidase protein [Bradyrhizobium japonicum
USDA 110]
gi|7451519|pir||JC5902 ubiquinol oxidase (EC 1.-.-.-) IV - Bradyrhizobium japonicum
gi|27350973|dbj|BAC47982.1| cytochrome O ubiquinol oxidase protein [Bradyrhizobium japonicum
USDA 110]
Length = 129
Score = 74.4 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 34 PFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAI 93
F I +I IV AIAQ+ VHLVFFLH++T ++ +++A+ F +++V +
Sbjct: 44 SFFIAGTDLVWQPSIPVALIV-LAIAQMGVHLVFFLHITTGPDNTNNVLALAFGLLVVFL 102
Query: 94 CFVGSMWVMYHLNNNMMSMEGMRSI 118
G++W+M HLN NM M+ + +
Sbjct: 103 VVGGTVWIMSHLNGNMPPMDQIMRM 127
>gi|330993478|ref|ZP_08317413.1| Cytochrome o ubiquinol oxidase protein CyoD [Gluconacetobacter sp.
SXCC-1]
gi|329759508|gb|EGG76017.1| Cytochrome o ubiquinol oxidase protein CyoD [Gluconacetobacter sp.
SXCC-1]
Length = 84
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 29 ILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTI 88
ILT+ FG+VM I L A+ QI+VHL++FLHM+ E W++MA +FT+
Sbjct: 2 ILTVAAFGLVMSHAMSPSA-TGGAIALLAVVQIVVHLIYFLHMNGSSEQRWNVMAFVFTV 60
Query: 89 IMVAICFVGSMWVMYHLNNNMMS 111
+ V + G+M++M+ + NMMS
Sbjct: 61 LSVLVLVAGTMFIMHDTSINMMS 83
>gi|315646201|ref|ZP_07899321.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus vortex
V453]
gi|315278400|gb|EFU41716.1| cytochrome o ubiquinol oxidase subunit IV [Paenibacillus vortex
V453]
Length = 107
Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M N H +G+ K +GF S+ILT+IP +VM + + ++ A+ Q
Sbjct: 1 MVPSNSHQT-PEGHGSFKSYTIGFFCSIILTLIPITVVMNDWLEG-TWNSVVLMTAAVLQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
++V L+FF+H+ + + +++++++ ++++ + GSMW+M
Sbjct: 59 LMVQLLFFMHLREENKPRYNLISLVLGLVILLVIVAGSMWIM 100
>gi|16799095|ref|NP_469363.1| hypothetical protein lin0016 [Listeria innocua Clip11262]
gi|16412437|emb|CAC95249.1| qoxD [Listeria innocua Clip11262]
Length = 110
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MAQNNKSNAAHAEGGIPWKHIVGFALSIILTLLAVWVAIYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107
>gi|46906242|ref|YP_012631.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093031|ref|ZP_00230810.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 4b
H7858]
gi|116871439|ref|YP_848220.1| quinol oxidase AA3, subunit IV [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217965918|ref|YP_002351596.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria monocytogenes
HCC23]
gi|226222656|ref|YP_002756763.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes Clip81459]
gi|254824761|ref|ZP_05229762.1| quinol oxidase AA3 [Listeria monocytogenes FSL J1-194]
gi|254851825|ref|ZP_05241173.1| quinol oxidase AA3 [Listeria monocytogenes FSL R2-503]
gi|254930850|ref|ZP_05264209.1| quinol oxidase AA3 [Listeria monocytogenes HPB2262]
gi|255519797|ref|ZP_05387034.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes FSL J1-175]
gi|290892054|ref|ZP_06555051.1| quinol oxidase AA3 [Listeria monocytogenes FSL J2-071]
gi|300763371|ref|ZP_07073369.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes FSL N1-017]
gi|315273206|ref|ZP_07869233.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria marthii FSL
S4-120]
gi|46879506|gb|AAT02808.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes serotype 4b
str. F2365]
gi|47018599|gb|EAL09353.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 4b
H7858]
gi|116740317|emb|CAK19435.1| quinol oxidase AA3, subunit IV [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217335188|gb|ACK40982.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria monocytogenes
HCC23]
gi|225875118|emb|CAS03808.1| Putative quinol oxidase aa3-600 chain IV [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605117|gb|EEW17725.1| quinol oxidase AA3 [Listeria monocytogenes FSL R2-503]
gi|290558648|gb|EFD92165.1| quinol oxidase AA3 [Listeria monocytogenes FSL J2-071]
gi|293582394|gb|EFF94426.1| quinol oxidase AA3 [Listeria monocytogenes HPB2262]
gi|293594000|gb|EFG01761.1| quinol oxidase AA3 [Listeria monocytogenes FSL J1-194]
gi|300515648|gb|EFK42697.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes FSL N1-017]
gi|307569539|emb|CAR82718.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes L99]
gi|313616168|gb|EFR89266.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria marthii FSL
S4-120]
gi|313621617|gb|EFR92434.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria innocua FSL
S4-378]
gi|328468340|gb|EGF39346.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes 1816]
gi|328476159|gb|EGF46865.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes 220]
gi|332310354|gb|EGJ23449.1| Quinol oxidase subunit 4 [Listeria monocytogenes str. Scott A]
Length = 110
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107
>gi|16802064|ref|NP_463549.1| hypothetical protein lmo0016 [Listeria monocytogenes EGD-e]
gi|47095077|ref|ZP_00232689.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 1/2a
F6854]
gi|224498292|ref|ZP_03666641.1| hypothetical protein LmonF1_00795 [Listeria monocytogenes Finland
1988]
gi|224503060|ref|ZP_03671367.1| hypothetical protein LmonFR_11156 [Listeria monocytogenes FSL
R2-561]
gi|254827441|ref|ZP_05232128.1| quinol oxidase AA3 [Listeria monocytogenes FSL N3-165]
gi|254830691|ref|ZP_05235346.1| hypothetical protein Lmon1_05004 [Listeria monocytogenes 10403S]
gi|254899669|ref|ZP_05259593.1| hypothetical protein LmonJ_07646 [Listeria monocytogenes J0161]
gi|254913128|ref|ZP_05263140.1| qoxD [Listeria monocytogenes J2818]
gi|254937509|ref|ZP_05269206.1| quinol oxidase AA3 [Listeria monocytogenes F6900]
gi|284803249|ref|YP_003415114.1| hypothetical protein LM5578_3006 [Listeria monocytogenes 08-5578]
gi|284996390|ref|YP_003418158.1| hypothetical protein LM5923_2955 [Listeria monocytogenes 08-5923]
gi|16409375|emb|CAC98231.1| qoxD [Listeria monocytogenes EGD-e]
gi|47016422|gb|EAL07343.1| quinol oxidase AA3, subunit IV [Listeria monocytogenes str. 1/2a
F6854]
gi|258599818|gb|EEW13143.1| quinol oxidase AA3 [Listeria monocytogenes FSL N3-165]
gi|258610110|gb|EEW22718.1| quinol oxidase AA3 [Listeria monocytogenes F6900]
gi|284058811|gb|ADB69752.1| hypothetical protein LM5578_3006 [Listeria monocytogenes 08-5578]
gi|284061857|gb|ADB72796.1| hypothetical protein LM5923_2955 [Listeria monocytogenes 08-5923]
gi|293591130|gb|EFF99464.1| qoxD [Listeria monocytogenes J2818]
Length = 110
Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS++LT++ + + N+ + I + A Q
Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107
>gi|254992950|ref|ZP_05275140.1| quinol oxidase aa3-600 chain IV [Listeria monocytogenes FSL J2-064]
Length = 110
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 60 AALQLLMFMHMTEGRDGKIQISNILFAAFIAIVVVIGSYWVMEIGHMN 107
>gi|254512695|ref|ZP_05124761.1| Prokaryotic Cytochrome C oxidase subunit IV superfamily
[Rhodobacteraceae bacterium KLH11]
gi|221532694|gb|EEE35689.1| Prokaryotic Cytochrome C oxidase subunit IV superfamily
[Rhodobacteraceae bacterium KLH11]
Length = 102
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
++ ++G+ SL+LT + FGI F ++ + +TI L +AQ++V LV+FLH+ +
Sbjct: 7 RRYVIGYGGSLLLTFVVFGIA-YQFGIETPGVYMTIGLLGLAQLVVQLVYFLHIDRRRSS 65
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+ ++F+ +++ I G++WV+ +L M
Sbjct: 66 REDLDLILFSTLVLLIIIGGTIWVLGNLAMRM 97
>gi|289433389|ref|YP_003463261.1| quinol oxidase AA3, subunit IV [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289169633|emb|CBH26167.1| quinol oxidase AA3, subunit IV [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 110
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MAQNNKSNAAHAESGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107
>gi|313640101|gb|EFS04727.1| cytochrome aa3 quinol oxidase, subunit IV [Listeria seeligeri FSL
S4-171]
Length = 110
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MAQNNKSNTAHAEGGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 60 AALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 107
>gi|167463408|ref|ZP_02328497.1| hypothetical protein Plarl_12766 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322382243|ref|ZP_08056155.1| cytochrome quinol oxidase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153791|gb|EFX46160.1| cytochrome quinol oxidase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 106
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
N H+ + G + +VG+++S++LT++ V N++ I + A Q +
Sbjct: 2 SNSHDTSAEHKGFPWKHVVGYLVSIVLTLLALW-VAFKSGFSINVLMTFIYILAFLQAAL 60
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
L+ F+HM+ + M++ + + + GS+WVM +
Sbjct: 61 QLLMFMHMTESSNGKYQTGTMLYAVFIAIVIAAGSVWVMSSGHA 104
>gi|299820826|ref|ZP_07052715.1| quinol oxidase subunit IV [Listeria grayi DSM 20601]
gi|299817847|gb|EFI85082.1| quinol oxidase subunit IV [Listeria grayi DSM 20601]
Length = 109
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIV 63
+N ++ H Q ++GF LS+ILT++ + + D ++ + I + A Q ++
Sbjct: 3 ENKNSTQTHKAHGPWQHIIGFALSIILTLLAVWVALYSTL-DHSVKVVIIFIFAFIQAML 61
Query: 64 HLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
L F+HM+ + + ++F + + I +GS WVM + N
Sbjct: 62 QLFMFMHMTEGKDGKVNTSGILFALFIAIIVVIGSYWVMEIGHMN 106
>gi|126730195|ref|ZP_01746007.1| cytochrome O ubiquinol oxidase subunit IV [Sagittula stellata E-37]
gi|126709575|gb|EBA08629.1| cytochrome O ubiquinol oxidase subunit IV [Sagittula stellata E-37]
Length = 103
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ GF +++LT + F + F I ++ + A Q++VH FFLH+ +
Sbjct: 11 LRMYFTGFAAAIVLTALSFATAILQPFGPMGI-FASLAVLAAVQVVVHFRFFLHIDFSRQ 69
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ ++FT +++AI G++WV+ +L MM
Sbjct: 70 KREDLQLILFTGLIIAIMVAGTVWVLGNLMARMM 103
>gi|126642214|ref|YP_001085198.1| cytochrome o ubiquinol oxidase subunit IV [Acinetobacter baumannii
ATCC 17978]
Length = 74
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 37 IVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFV 96
+VM G F + ++ I + A+AQ++V LV+FLHM+T E W+++A I+TI+ +A+ +
Sbjct: 1 MVMAGGF-SRGLLVTVIAITAVAQVLVQLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLI 59
Query: 97 GSMWVMYHLNNNMM 110
GS+W+M +L+ NMM
Sbjct: 60 GSVWIMNYLHYNMM 73
>gi|154687939|ref|YP_001423100.1| QoxD [Bacillus amyloliquefaciens FZB42]
gi|154353790|gb|ABS75869.1| QoxD [Bacillus amyloliquefaciens FZB42]
Length = 122
Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
HS+ K +VGF LS+ILT++ + + + I A Q + L+ F
Sbjct: 5 SAEHSHFPWK-HIVGFALSIILTLLALWVAVYTELSPSAKL-WIIFGFAFIQAGLQLLMF 62
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+HM+ G + +F + +GS+W+ ++
Sbjct: 63 MHMTESENGGIQVGNTLFGFFGAIVIILGSIWIFAAHYHH 102
>gi|56421991|ref|YP_149309.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus kaustophilus
HTA426]
gi|56381833|dbj|BAD77741.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus kaustophilus
HTA426]
Length = 99
Score = 71.0 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N H + ++GF+LSL+LT + + K + + IVL AI Q + L
Sbjct: 2 GANSHRESFPWKHIIGFLLSLVLTFAALWVALSSGLPLKAV-IVIIVLFAIIQASLQLFL 60
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
F+H++ M+++ + + GS+WVM
Sbjct: 61 FMHVNESDSGKVQTFNMVYSFFIAVVVVAGSIWVM 95
>gi|296331456|ref|ZP_06873928.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676443|ref|YP_003868115.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus subtilis
subsp. spizizenii str. W23]
gi|317411865|sp|E0TW64|QOX4_BACPZ RecName: Full=Quinol oxidase subunit 4; AltName: Full=Quinol
oxidase aa3-600, subunit qoxD; AltName: Full=Quinol
oxidase polypeptide IV
gi|296151571|gb|EFG92448.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414687|gb|ADM39806.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 124
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
HS+ K +VGF LS++LT++ + + L + I A Q + L+ F
Sbjct: 5 SAEHSHFPWK-HIVGFALSIVLTLLALWVAVY-TDLSSSAKLWIIFGFAFIQAALQLLMF 62
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+HM+ G + +F + +GS+W+ ++
Sbjct: 63 MHMTESENGGIQVGNTLFGFFGAIVIVLGSIWIFAAHYHH 102
>gi|219682374|ref|YP_002468758.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219622107|gb|ACL30263.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|311086195|gb|ADP66277.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086771|gb|ADP66852.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087359|gb|ADP67439.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087857|gb|ADP67936.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 105
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K L+GF+ S +LT +PF + ++ FF + + + +LCAI+QII+H V+FLH+S E
Sbjct: 13 IKSYLLGFLFSSLLTTLPFLLAIEKFFCSE-VNYIIFLLCAISQIIIHFVYFLHLSFDPE 71
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W+++ ++F II++ I GS+W+M++LN+N M
Sbjct: 72 ERWNLITLLFVIIIIFIVVFGSIWIMFNLNHNTM 105
>gi|308175541|ref|YP_003922246.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus
amyloliquefaciens DSM 7]
gi|307608405|emb|CBI44776.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus
amyloliquefaciens DSM 7]
gi|328555519|gb|AEB26011.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus
amyloliquefaciens TA208]
gi|328913891|gb|AEB65487.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus
amyloliquefaciens LL3]
Length = 122
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
HS+ K +VGF LS+ILT++ + + L + I A Q + L+ F
Sbjct: 5 SAEHSHFPWK-HIVGFALSIILTLLALWVAVY-TDLSSSAKLWIIFGFAFIQAGLQLLMF 62
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+HM+ G + +F + +GS+W+ ++
Sbjct: 63 MHMTESENGGIQVGNTLFGFFGAIVIILGSIWIFAAHYHH 102
>gi|15617067|ref|NP_240280.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
gi|219681819|ref|YP_002468205.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|257471521|ref|ZP_05635520.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|11386746|sp|P57541|CYOD_BUCAI RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD
gi|25331171|pir||F84984 cytochrome o ubiquinol oxidase subunit IV [imported] - Buchnera sp.
(strain APS)
gi|10039132|dbj|BAB13166.1| cytochrome o ubiquinol oxidase subunit IV [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
gi|219624662|gb|ACL30817.1| cytochrome O ubiquinol oxidase subunit IV [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
Length = 105
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K L+GF+ S +LT +PF + ++ FF + + + +LCAI+QII+H V+FLH+S E
Sbjct: 13 MKSYLLGFLFSSLLTTLPFLLAIEKFFCSE-VNYIIFLLCAISQIIIHFVYFLHLSFDPE 71
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ W+++ ++F II++ I GS+W+M++LN+N M
Sbjct: 72 ERWNLITLLFVIIIIFIVVFGSIWIMFNLNHNTM 105
>gi|16080865|ref|NP_391693.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311779|ref|ZP_03593626.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. subtilis str. 168]
gi|221316104|ref|ZP_03597909.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221321017|ref|ZP_03602311.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221325301|ref|ZP_03606595.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313371|ref|YP_004205658.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus subtilis
BSn5]
gi|464515|sp|P34959|QOX4_BACSU RecName: Full=Quinol oxidase subunit 4; AltName: Full=Quinol
oxidase aa3-600, subunit QoxD; AltName: Full=Quinol
oxidase polypeptide IV
gi|143399|gb|AAA22689.1| quinol oxidase [Bacillus subtilis]
gi|413964|emb|CAA51596.1| ipa-40d qoxD [Bacillus subtilis subsp. subtilis str. 168]
gi|2636349|emb|CAB15840.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis
subsp. subtilis str. 168]
gi|291486405|dbj|BAI87480.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus subtilis subsp.
natto BEST195]
gi|320019645|gb|ADV94631.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus subtilis
BSn5]
Length = 124
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
HS+ K +VGFILS++LT++ + + L + I A Q + L+ F
Sbjct: 5 SAEHSHFPWK-HIVGFILSIVLTLLALWVAVY-TDLSSSAKLWIIFGFAFIQAALQLLMF 62
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+HM+ + +F + +GS+W+ ++
Sbjct: 63 MHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAHYHH 102
>gi|294498633|ref|YP_003562333.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium QM
B1551]
gi|295703992|ref|YP_003597067.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium DSM
319]
gi|294348570|gb|ADE68899.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium QM
B1551]
gi|294801651|gb|ADF38717.1| cytochrome o quinol oxidase subunit IV [Bacillus megaterium DSM
319]
Length = 98
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 12 HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71
++G+ K +GFI S+ILT+IP +V+ F KNI+ +I+ A+ Q + L FF+H+
Sbjct: 2 ENHGSLKAYTIGFIFSIILTVIPLMLVLNHVFA-KNILLASILGMAVLQFFIQLFFFMHI 60
Query: 72 STKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
+ +++MA+I I+ V GS+W+M
Sbjct: 61 KDGEKPRYNVMALILGIVFVITIVAGSIWIM 91
>gi|311070325|ref|YP_003975248.1| cytochrome aa3-600 quinol oxidase subunit IV [Bacillus atrophaeus
1942]
gi|310870842|gb|ADP34317.1| cytochrome aa3-600 quinol oxidase (subunit IV) [Bacillus atrophaeus
1942]
Length = 122
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N H++ K +VGF LS++LT++ + + + I A Q + L+
Sbjct: 2 ATNEHNHFPWK-HIVGFALSIVLTLLALWVAVYTELSPSAKL-WIIFGFAFIQAALQLLM 59
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
F+HM + +F + +GS+W+ ++
Sbjct: 60 FMHMRESENGTIQVGNTLFGFFGAIVIVLGSVWIFAAHYHH 100
>gi|138897017|ref|YP_001127470.1| cytochrome aa3 quinol oxidase polypeptide IV [Geobacillus
thermodenitrificans NG80-2]
gi|134268530|gb|ABO68725.1| Cytochrome aa3 quinol oxidase polypeptide IV [Geobacillus
thermodenitrificans NG80-2]
Length = 99
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N H + L+GF+LSL+LT + + K + + IVL A+ Q + L
Sbjct: 2 GTNGHHESFPWKHLIGFVLSLLLTFAALWVALSSGLPLKAV-IVVIVLFAMIQASLQLFM 60
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
F+H+ M+++ + I GS+WVM
Sbjct: 61 FMHVVESDSGKVQTFNMVYSFFIAVIVVAGSVWVM 95
>gi|149182658|ref|ZP_01861126.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. SG-1]
gi|148849627|gb|EDL63809.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. SG-1]
Length = 100
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
VGFI+SL+LT V L ++ I A+ Q + L F+H++ +
Sbjct: 11 SHFVGFIMSLVLTFAAAW-VALKTSLSFTVVMWVIGTLAVVQAGLQLFMFMHVNEGEDGK 69
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
I+ +I+ + + +GS+WV+ +
Sbjct: 70 VQIINIIYAVFCAVVIVIGSIWVLTSGHA 98
>gi|198282920|ref|YP_002219241.1| hypothetical protein Lferr_0784 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667693|ref|YP_002425123.1| cytochrome o ubiquinol oxidase, subunit IV [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247441|gb|ACH83034.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519906|gb|ACK80492.1| cytochrome o ubiquinol oxidase, subunit IV [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 118
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 3 YDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQII 62
+D+ T + GF +S IL + +V ++ I +CA II
Sbjct: 5 HDDPTLHPEVQMSTSRGYFSGFAISSILMFVATFLVASRAVPPFGLLM-VISVCAGIAII 63
Query: 63 VHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMMSMEGM 115
+ F LH+ + W+ +A++ + + I + W+ L M M GM
Sbjct: 64 AQIYFLLHIDVSEHNIWNTVALVLFMPLFLITIGLTWWMFSQLYLRTMIMPGM 116
>gi|218289388|ref|ZP_03493622.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus
acidocaldarius LAA1]
gi|258510664|ref|YP_003184098.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|218240494|gb|EED07675.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus
acidocaldarius LAA1]
gi|257477390|gb|ACV57709.1| cytochrome aa3 quinol oxidase, subunit IV [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 106
Score = 67.1 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 31 TIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIM 90
T I F + + ++ IV+ + Q++V L F+H + + W + A+ F + +
Sbjct: 29 TAIAFWLALA-THQPPALVITIIVILGVGQLLVQLYMFMHFTESDDRAWQVPAIYFGLFI 87
Query: 91 VAICFVGSMWVM 102
V GS+W+M
Sbjct: 88 VFCVVGGSIWIM 99
>gi|295695109|ref|YP_003588347.1| cytochrome C oxidase subunit IV [Bacillus tusciae DSM 2912]
gi|295410711|gb|ADG05203.1| cytochrome C oxidase subunit IV [Bacillus tusciae DSM 2912]
Length = 104
Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 5 NIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
N + +G+ ++ ++ F + ++ T+I F +V G + ++ I+ A+ Q+I+
Sbjct: 10 NTGTESASGHGSVRKHIISFAIMILFTVIAFAMV--GAGMSPTVVIPVILALAVIQVILQ 67
Query: 65 LVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMW 100
L F+H++ K ++ ++ V +W
Sbjct: 68 LWDFMHLNQKGHSFPTLFIASGAMLGFIFVLVLVLW 103
>gi|229541706|ref|ZP_04430766.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus coagulans 36D1]
gi|229326126|gb|EEN91801.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus coagulans 36D1]
Length = 94
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
++GF+LS++LT++ + + L K + TI A Q V L F+H+
Sbjct: 10 GHIIGFLLSIVLTLVALYVALY-TNLSKTAIIWTIGFFAFLQAGVQLFMFMHVKEGESGK 68
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMY 103
++ MI++II+ + G++WVM+
Sbjct: 69 INVGNMIYSIIIAIVVVYGTIWVMH 93
>gi|260430762|ref|ZP_05784734.1| cytochrome C oxidase subunit IV [Silicibacter lacuscaerulensis
ITI-1157]
gi|260418203|gb|EEX11461.1| cytochrome C oxidase subunit IV [Silicibacter lacuscaerulensis
ITI-1157]
Length = 93
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 21 LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWS 80
++G+ SL+LT+ F V + + LTI L +AQ+IV LV+FLH+ +
Sbjct: 1 MIGYGSSLLLTLAMFATVHWFGIETRGV-YLTIGLLGLAQLIVQLVYFLHIDRRRSSRED 59
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNM-MS 111
+ ++F+ +++ I G++W++ +L M M
Sbjct: 60 LDLVLFSTLVLLIIIGGTVWILGNLAMRMHMP 91
>gi|226314593|ref|YP_002774489.1| cytochrome c oxidase polypeptide IVB [Brevibacillus brevis NBRC
100599]
gi|226097543|dbj|BAH45985.1| cytochrome c oxidase polypeptide IVB [Brevibacillus brevis NBRC
100599]
Length = 105
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 14 YGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMST 73
+ K+ LV FI SL+LT + F V IV A Q L ++HM
Sbjct: 17 HEGPKRHLVAFIGSLVLTALAFIAVAYEAIPS-GFTVPFIVALAFVQAFFQLYVWMHMDQ 75
Query: 74 KVED--GWSIMAMIFTIIMVAICFVGSMWV 101
K + SI A +F I+M I F+ +WV
Sbjct: 76 KGHEFARISIFAGLFVIMMAIIVFIFWVWV 105
>gi|330950891|gb|EGH51151.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae Cit
7]
Length = 78
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 34 PFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAI 93
PF +VM K++ +++ AI QI+VHL +FLH+ ++MA FT +++ +
Sbjct: 1 PFALVMSPSL-PKDMTIAIVLVFAIIQILVHLHYFLHLDFTSVQRNNVMAFAFTTMVIVL 59
Query: 94 CFVGSMWVMYHLNNNMMS 111
S+W+++ ++ MM+
Sbjct: 60 LVGLSLWIIFSVHREMMA 77
>gi|94498851|ref|ZP_01305392.1| Prokaryotic Cytochrome C oxidase subunit IV [Sphingomonas sp.
SKA58]
gi|94421692|gb|EAT06752.1| Prokaryotic Cytochrome C oxidase subunit IV [Sphingomonas sp.
SKA58]
Length = 85
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 49/67 (73%)
Query: 51 LTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
L I+ A Q++VH+++FLHM+++VE GWS MAM+ TI++V I GSMWVMYHLN NMM
Sbjct: 1 LLILAFAAVQVVVHMIYFLHMNSRVEGGWSFMAMMLTIVLVVIVLSGSMWVMYHLNANMM 60
Query: 111 SMEGMRS 117
M+
Sbjct: 61 PHADMQM 67
>gi|258510524|ref|YP_003183958.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477250|gb|ACV57569.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 107
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
G + ++G+ LSLI T I F + + + + + + + A QI V L FF+H++
Sbjct: 13 GGLAKYIIGYGLSLIFTAIAFWLALSHAMSIRP-LIILLFVLAALQIGVQLFFFMHVTEG 71
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVM 102
+ + ++ +I + SMW+M
Sbjct: 72 DGPPYHALLLLLGMIFTFAVAMMSMWIM 99
>gi|52082323|ref|YP_081114.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus licheniformis
ATCC 14580]
gi|52787714|ref|YP_093543.1| QoxD [Bacillus licheniformis ATCC 14580]
gi|319648197|ref|ZP_08002414.1| QoxD protein [Bacillus sp. BT1B_CT2]
gi|52005534|gb|AAU25476.1| cytochrome aa3 quinol oxidase (subunit IV) [Bacillus licheniformis
ATCC 14580]
gi|52350216|gb|AAU42850.1| QoxD [Bacillus licheniformis ATCC 14580]
gi|317389832|gb|EFV70642.1| QoxD protein [Bacillus sp. BT1B_CT2]
Length = 121
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
HS+ K +VGF+LS++LT++ ++ L I AI Q + L+
Sbjct: 5 QSAEHSHFPWK-HIVGFVLSIVLTLLALWVIYTD--LSMAAKLWIIFGFAIIQAGLQLLM 61
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
F+HM+ + +F + GS+W+ N +
Sbjct: 62 FMHMTESDSGKIQVGNTLFAAFIAVAIIAGSVWIFAAHNYH 102
>gi|228963800|ref|ZP_04124940.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228795871|gb|EEM43339.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 103
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MAQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIITAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|207744471|ref|YP_002260863.1| hypothetical ubiquinol oxidase subunit ( partial sequence) protein
[Ralstonia solanacearum IPO1609]
gi|206595877|emb|CAQ62804.1| hypothetical ubiquinol oxidase subunit ( partial sequence) protein
[Ralstonia solanacearum IPO1609]
Length = 56
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 42/54 (77%)
Query: 57 AIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
A+ QI+VHL++FLH+ W++MA +FT++++AI VGS+WVM+++N NMM
Sbjct: 1 AVVQIVVHLIYFLHLDGSSAQRWNVMAFLFTLLILAIVIVGSLWVMHNMNINMM 54
>gi|47568830|ref|ZP_00239524.1| quinol oxidase, subunit IV [Bacillus cereus G9241]
gi|47554506|gb|EAL12863.1| quinol oxidase, subunit IV [Bacillus cereus G9241]
Length = 103
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MSQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|319892052|ref|YP_004148927.1| quinol oxidase polypeptide IV QoxD [Staphylococcus pseudintermedius
HKU10-03]
gi|317161748|gb|ADV05291.1| quinol oxidase polypeptide IV QoxD [Staphylococcus pseudintermedius
HKU10-03]
gi|323464839|gb|ADX76992.1| quinol oxidase subunit IV [Staphylococcus pseudintermedius ED99]
Length = 96
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + +GFI S+ILT++ + + I A Q + L+ F+H++
Sbjct: 3 TIVKHTIGFIASIILTLLAVFVTLYTSL-SFQAKVTIIFGFAFIQAFLQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ + +IF II+ I +G+ WVM +
Sbjct: 62 DGRVQLAKVIFAIIITLITVIGTYWVMQGGH 92
>gi|229195023|ref|ZP_04321800.1| Quinol oxidase, subunit IV [Bacillus cereus m1293]
gi|228588458|gb|EEK46499.1| Quinol oxidase, subunit IV [Bacillus cereus m1293]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TDLPLSTILTTIIVMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 103
>gi|229028499|ref|ZP_04184619.1| Quinol oxidase, subunit IV [Bacillus cereus AH1271]
gi|228732812|gb|EEL83674.1| Quinol oxidase, subunit IV [Bacillus cereus AH1271]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MDQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIVMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|222094455|ref|YP_002528514.1| quinol oxidase, subunit iv (cytochrome c oxidase, subunit iv)
[Bacillus cereus Q1]
gi|221238512|gb|ACM11222.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV)
[Bacillus cereus Q1]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-SDLPLSTILTTIIVMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 103
>gi|261420865|ref|YP_003254547.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. Y412MC61]
gi|297531650|ref|YP_003672925.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. C56-T3]
gi|319768536|ref|YP_004134037.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. Y412MC52]
gi|261377322|gb|ACX80065.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp.
Y412MC61]
gi|297254902|gb|ADI28348.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. C56-T3]
gi|317113402|gb|ADU95894.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp.
Y412MC52]
Length = 99
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N H + ++GF+LSL+LT + + K ++ + +V + Q + L
Sbjct: 2 GTNGHHESFPWKHIIGFLLSLVLTFAALWVALSSGLPLKAVIVIIVVFA-VIQASLQLFM 60
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
F+H++ M ++ + + GS+WVM
Sbjct: 61 FMHVNESDSGRIQTFNMAYSFFIAIVVVAGSIWVM 95
>gi|229171483|ref|ZP_04299067.1| Quinol oxidase, subunit IV [Bacillus cereus MM3]
gi|228612021|gb|EEK69259.1| Quinol oxidase, subunit IV [Bacillus cereus MM3]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MDQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|295402443|ref|ZP_06812396.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus
thermoglucosidasius C56-YS93]
gi|312112704|ref|YP_003991020.1| cytochrome aa3 quinol oxidase subunit IV [Geobacillus sp. Y4.1MC1]
gi|294975534|gb|EFG51159.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217805|gb|ADP76409.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp. Y4.1MC1]
Length = 99
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N H + +VGFI SL+LT + + + IV+ A+ Q + L
Sbjct: 2 GANHHHETFPWKHIVGFIFSLLLTFAALWVALSSGL-STGAIIGIIVILAVIQASLQLFM 60
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103
F+HM+ + M ++ + + VGS+W M
Sbjct: 61 FMHMTESDSGKIQTINMAYSFFIAVVVVVGSIWTMS 96
>gi|30018877|ref|NP_830508.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus cereus ATCC
14579]
gi|75762631|ref|ZP_00742476.1| Cytochrome aa3 quinol oxidase polypeptide IV [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218233610|ref|YP_002365494.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus B4264]
gi|218895753|ref|YP_002444164.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus G9842]
gi|228899383|ref|ZP_04063644.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 4222]
gi|228906453|ref|ZP_04070334.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 200]
gi|228942998|ref|ZP_04105503.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228951198|ref|ZP_04113313.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228957118|ref|ZP_04118888.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228975946|ref|ZP_04136467.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977447|ref|ZP_04137841.1| Quinol oxidase, subunit IV [Bacillus thuringiensis Bt407]
gi|229042561|ref|ZP_04190304.1| Quinol oxidase, subunit IV [Bacillus cereus AH676]
gi|229068384|ref|ZP_04201687.1| Quinol oxidase, subunit IV [Bacillus cereus F65185]
gi|229078011|ref|ZP_04210620.1| Quinol oxidase, subunit IV [Bacillus cereus Rock4-2]
gi|229108307|ref|ZP_04237926.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-15]
gi|229126126|ref|ZP_04255147.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-Cer4]
gi|229143424|ref|ZP_04271853.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST24]
gi|229149038|ref|ZP_04277282.1| Quinol oxidase, subunit IV [Bacillus cereus m1550]
gi|229177228|ref|ZP_04304615.1| Quinol oxidase, subunit IV [Bacillus cereus 172560W]
gi|29894419|gb|AAP07709.1| Cytochrome aa3 quinol oxidase polypeptide IV [Bacillus cereus ATCC
14579]
gi|74489878|gb|EAO53249.1| Cytochrome aa3 quinol oxidase polypeptide IV [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218161567|gb|ACK61559.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus B4264]
gi|218545032|gb|ACK97426.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus G9842]
gi|228606234|gb|EEK63668.1| Quinol oxidase, subunit IV [Bacillus cereus 172560W]
gi|228634420|gb|EEK91005.1| Quinol oxidase, subunit IV [Bacillus cereus m1550]
gi|228640052|gb|EEK96453.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST24]
gi|228657333|gb|EEL13150.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-Cer4]
gi|228675144|gb|EEL30369.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-15]
gi|228705349|gb|EEL57726.1| Quinol oxidase, subunit IV [Bacillus cereus Rock4-2]
gi|228714845|gb|EEL66717.1| Quinol oxidase, subunit IV [Bacillus cereus F65185]
gi|228726780|gb|EEL77994.1| Quinol oxidase, subunit IV [Bacillus cereus AH676]
gi|228782271|gb|EEM30455.1| Quinol oxidase, subunit IV [Bacillus thuringiensis Bt407]
gi|228783782|gb|EEM31840.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228802565|gb|EEM49412.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228808495|gb|EEM54999.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228816662|gb|EEM62782.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228853180|gb|EEM97956.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 200]
gi|228860237|gb|EEN04636.1| Quinol oxidase, subunit IV [Bacillus thuringiensis IBL 4222]
gi|326938472|gb|AEA14368.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MAQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|229056467|ref|ZP_04195879.1| Quinol oxidase, subunit IV [Bacillus cereus AH603]
gi|228720864|gb|EEL72414.1| Quinol oxidase, subunit IV [Bacillus cereus AH603]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHGHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + A ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRIQILTMIYSFFVAAATVGLTVWIFFSM 103
>gi|229165640|ref|ZP_04293412.1| Quinol oxidase, subunit IV [Bacillus cereus AH621]
gi|228617814|gb|EEK74867.1| Quinol oxidase, subunit IV [Bacillus cereus AH621]
Length = 103
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + A ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRIQILTMIYSFFVAAATVGLTVWIFFSM 103
>gi|52144611|ref|YP_082217.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV)
[Bacillus cereus E33L]
gi|206977797|ref|ZP_03238687.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus
H3081.97]
gi|217958284|ref|YP_002336830.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH187]
gi|229154400|ref|ZP_04282519.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 4342]
gi|301052349|ref|YP_003790560.1| quinol oxidase subunit IV [Bacillus anthracis CI]
gi|51978080|gb|AAU19630.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV)
[Bacillus cereus E33L]
gi|206743994|gb|EDZ55411.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus
H3081.97]
gi|217064048|gb|ACJ78298.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH187]
gi|228629048|gb|EEK85756.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 4342]
gi|300374518|gb|ADK03422.1| quinol oxidase, subunit IV [Bacillus cereus biovar anthracis str.
CI]
gi|324324741|gb|ADY20001.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 103
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 103
>gi|30260850|ref|NP_843227.1| quinol oxidase, subunit IV [Bacillus anthracis str. Ames]
gi|47525981|ref|YP_017330.1| quinol oxidase subunit IV [Bacillus anthracis str. 'Ames Ancestor']
gi|49183691|ref|YP_026943.1| quinol oxidase subunit IV [Bacillus anthracis str. Sterne]
gi|65318128|ref|ZP_00391087.1| COG3125: Heme/copper-type cytochrome/quinol oxidase, subunit 4
[Bacillus anthracis str. A2012]
gi|170709009|ref|ZP_02899440.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0389]
gi|229601937|ref|YP_002865295.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0248]
gi|254762357|ref|ZP_05214201.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
Australia 94]
gi|30254299|gb|AAP24713.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
Ames]
gi|47501129|gb|AAT29805.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
'Ames Ancestor']
gi|49177618|gb|AAT52994.1| quinol oxidase, subunit IV [Bacillus anthracis str. Sterne]
gi|170126111|gb|EDS95007.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0389]
gi|229266345|gb|ACQ47982.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0248]
Length = 103
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI+ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIAMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|56963899|ref|YP_175630.1| cytochrome aa3 quinol oxidase subunit IV QoxD [Bacillus clausii
KSM-K16]
gi|56910142|dbj|BAD64669.1| cytochrome aa3 quinol oxidase subunit IV QoxD [Bacillus clausii
KSM-K16]
Length = 104
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
+ +G + ++GF+LS++LT++ VM L ++ + + + A Q+ V L
Sbjct: 6 ETAANHHGFPWKHVIGFVLSIVLTLLAVW-VMSQTNLAWDVRIIIVFVFAFIQMTVQLHM 64
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
F+H+ + F II+ I +GS V+ +
Sbjct: 65 FMHIGEGKAGYVQVGHTWFAIIIAVIIVIGSYLVLRTGHI 104
>gi|229541232|ref|ZP_04430292.1| cytochrome c oxidase, subunit IV [Bacillus coagulans 36D1]
gi|229325652|gb|EEN91327.1| cytochrome c oxidase, subunit IV [Bacillus coagulans 36D1]
Length = 109
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K +V FIL + LTII F V L K I+L A Q++ L +F+HM+ K
Sbjct: 25 MKYQVVSFILMMFLTIIAFWAV--HAHLSKWFTIPVILLLAAIQVVFQLFYFMHMNHKHH 82
Query: 77 DGWSIMAMIFTIIMVAICFV 96
+G + T++
Sbjct: 83 EGPKLFIFGGTLVAFVTVLA 102
>gi|319652991|ref|ZP_08007096.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. 2_A_57_CT2]
gi|317395340|gb|EFV76073.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. 2_A_57_CT2]
Length = 101
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 9 MNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF 68
+ S ++GF++SL+LT GIV+ L ++ I A+ Q + L F
Sbjct: 2 EHHQSKSFPISHVIGFVVSLVLTFAAAGIVL-KTNLSFKVIMWIIGSLAVIQAGMQLFMF 60
Query: 69 LHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
+H+ + +++ MI+ + MV + VGS+WV+ +
Sbjct: 61 MHLREGEDGKTNLVNMIYAVFMVIVIVVGSIWVLTSGHA 99
>gi|229016029|ref|ZP_04172985.1| Quinol oxidase, subunit IV [Bacillus cereus AH1273]
gi|229022248|ref|ZP_04178793.1| Quinol oxidase, subunit IV [Bacillus cereus AH1272]
gi|228739051|gb|EEL89502.1| Quinol oxidase, subunit IV [Bacillus cereus AH1272]
gi|228745262|gb|EEL95308.1| Quinol oxidase, subunit IV [Bacillus cereus AH1273]
Length = 103
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIVMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRIQVLTMIYSFFVATATVGLTVWIFFSM 103
>gi|196047111|ref|ZP_03114329.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB108]
gi|225862678|ref|YP_002748056.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB102]
gi|196022092|gb|EDX60781.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB108]
gi|225788629|gb|ACO28846.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus 03BB102]
Length = 103
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|49480257|ref|YP_034956.1| quinol oxidase subunit IV (cytochrome C oxidase subunit IV)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|165872915|ref|ZP_02217539.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0488]
gi|167635163|ref|ZP_02393479.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0442]
gi|167641836|ref|ZP_02400076.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0193]
gi|170689434|ref|ZP_02880625.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0465]
gi|177652861|ref|ZP_02935234.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0174]
gi|190568522|ref|ZP_03021428.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis
Tsiankovskii-I]
gi|196035699|ref|ZP_03103102.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus W]
gi|227816429|ref|YP_002816438.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
CDC 684]
gi|254684223|ref|ZP_05148083.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
CNEVA-9066]
gi|254725885|ref|ZP_05187667.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A1055]
gi|254734415|ref|ZP_05192128.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
Western North America USA6153]
gi|254742101|ref|ZP_05199788.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
Kruger B]
gi|254755777|ref|ZP_05207810.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
Vollum]
gi|49331813|gb|AAT62459.1| quinol oxidase, subunit IV (cytochrome C oxidase, subunit IV)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|164711328|gb|EDR16881.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0488]
gi|167510184|gb|EDR85590.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0193]
gi|167529422|gb|EDR92173.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0442]
gi|170666596|gb|EDT17368.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0465]
gi|172081895|gb|EDT66964.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
A0174]
gi|190560316|gb|EDV14295.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis
Tsiankovskii-I]
gi|195991666|gb|EDX55631.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus W]
gi|227006937|gb|ACP16680.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus anthracis str.
CDC 684]
Length = 103
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIVMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|42779847|ref|NP_977094.1| quinol oxidase, subunit IV [Bacillus cereus ATCC 10987]
gi|42735764|gb|AAS39702.1| quinol oxidase, subunit IV [Bacillus cereus ATCC 10987]
Length = 103
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|163938624|ref|YP_001643508.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus
weihenstephanensis KBAB4]
gi|229131647|ref|ZP_04260528.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST196]
gi|163860821|gb|ABY41880.1| Cytochrome aa3 quinol oxidase subunit IV [Bacillus
weihenstephanensis KBAB4]
gi|228651795|gb|EEL07751.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST196]
Length = 103
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + L + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHGHSGFPWSHVFGFILSLALTFLALYVALY-TNLPLSTILTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRIQVLTMIYSFFVATATVGLTVWIFFSM 103
>gi|206967909|ref|ZP_03228865.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH1134]
gi|229095349|ref|ZP_04226341.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-29]
gi|229101460|ref|ZP_04232201.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-28]
gi|229114299|ref|ZP_04243719.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-3]
gi|229188906|ref|ZP_04315939.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 10876]
gi|206736829|gb|EDZ53976.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH1134]
gi|228594611|gb|EEK52397.1| Quinol oxidase, subunit IV [Bacillus cereus ATCC 10876]
gi|228669137|gb|EEL24559.1| Quinol oxidase, subunit IV [Bacillus cereus Rock1-3]
gi|228681948|gb|EEL36084.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-28]
gi|228688208|gb|EEL42094.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-29]
Length = 103
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTTL-PLSTVLTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|229159779|ref|ZP_04287787.1| Quinol oxidase, subunit IV [Bacillus cereus R309803]
gi|228623716|gb|EEK80534.1| Quinol oxidase, subunit IV [Bacillus cereus R309803]
Length = 103
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + + + TI++ A+AQ
Sbjct: 1 MGQNNNQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTSL-PLSTVLTTIIIMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|294499883|ref|YP_003563583.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus megaterium QM
B1551]
gi|295705268|ref|YP_003598343.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus megaterium DSM
319]
gi|294349820|gb|ADE70149.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus megaterium QM
B1551]
gi|294802927|gb|ADF39993.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus megaterium DSM
319]
Length = 102
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N G + G ILSL LT G+V+ L ++I I++ A+ Q + LV
Sbjct: 3 NKQGQKAGFPLSHVFGLILSLALTFAALGLVVL-ADLSRSITMTLIMILALLQAAMQLVM 61
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
F+HM+ + ++++ + VG++W++
Sbjct: 62 FMHMTESENGKVQVANILYSFFIALCIVVGTLWIL 96
>gi|196042071|ref|ZP_03109356.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus
NVH0597-99]
gi|218901894|ref|YP_002449728.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH820]
gi|228925886|ref|ZP_04088970.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229089761|ref|ZP_04221021.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-42]
gi|229120349|ref|ZP_04249599.1| Quinol oxidase, subunit IV [Bacillus cereus 95/8201]
gi|229183032|ref|ZP_04310264.1| Quinol oxidase, subunit IV [Bacillus cereus BGSC 6E1]
gi|196027096|gb|EDX65718.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus
NVH0597-99]
gi|218538317|gb|ACK90715.1| cytochrome aa3 quinol oxidase, subunit IV [Bacillus cereus AH820]
gi|228600489|gb|EEK58077.1| Quinol oxidase, subunit IV [Bacillus cereus BGSC 6E1]
gi|228663159|gb|EEL18749.1| Quinol oxidase, subunit IV [Bacillus cereus 95/8201]
gi|228693569|gb|EEL47272.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-42]
gi|228833901|gb|EEM79454.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 103
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N G + GFILSL LT + + + I+ I A+AQ
Sbjct: 1 MGQNNTQANGHAHSGFPWSHVFGFILSLALTFLALYVALYTSLPLSTILTSII-AMAVAQ 59
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 60 ALLQLIMFMHLKEG-EGRIQILTMIYSFFVATATVGLTVWIFFSM 103
>gi|212638124|ref|YP_002314644.1| cytochrome aa3 quinol oxidase subunit IV [Anoxybacillus
flavithermus WK1]
gi|212559604|gb|ACJ32659.1| Cytochrome aa3 quinol oxidase subunit IV [Anoxybacillus
flavithermus WK1]
Length = 99
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+VGF+ SLILT + V + I+ I A+ Q + L F+H++ +
Sbjct: 10 SHVVGFLFSLILTFVAVF-VALKMNVSYTIVMWIIGSLAVIQAGLQLFMFMHVTEGEDGK 68
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
+++ M + + + + GS+WV+ +
Sbjct: 69 TNVINMAYAVFVAIVIVAGSIWVLTSGHA 97
>gi|15614630|ref|NP_242933.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus halodurans
C-125]
gi|10174686|dbj|BAB05786.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus halodurans
C-125]
Length = 136
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M ++ HS+ +VGF LS+I T++ VM N+ + I + A Q
Sbjct: 1 MAHEKE-TTATHSHSFPWMHVVGFALSIIFTLLAVW-VMSQTHWSWNVRVIVIFIFAFIQ 58
Query: 61 IIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNM 109
+ V L F+HM I F I + I VGS V+ + +
Sbjct: 59 MTVQLHMFMHMGEGKSGTVQIGHTWFAIAIAVIIVVGSYLVLTTGHLHT 107
>gi|311068009|ref|YP_003972932.1| cytochrome c oxidase, subunit IVB [Bacillus atrophaeus 1942]
gi|310868526|gb|ADP32001.1| cytochrome c oxidase, subunit IVB [Bacillus atrophaeus 1942]
Length = 110
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V + I+L A+ Q+I L +F+HM+ K
Sbjct: 25 MKYQVLSFGLMIGLTLVAFLTVASDDIGNW-FTIPFIILLAVIQVIFQLFYFMHMNQKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + IF + + FV +W
Sbjct: 84 EAPALFLYSGIFVAFITVLAFVTIIW 109
>gi|154685911|ref|YP_001421072.1| CtaF [Bacillus amyloliquefaciens FZB42]
gi|308173457|ref|YP_003920162.1| cytochrome caa3 oxidase subunit IV [Bacillus amyloliquefaciens DSM
7]
gi|154351762|gb|ABS73841.1| CtaF [Bacillus amyloliquefaciens FZB42]
gi|307606321|emb|CBI42692.1| cytochrome caa3 oxidase (subunit IV) [Bacillus amyloliquefaciens
DSM 7]
gi|328553614|gb|AEB24106.1| cytochrome c oxidase, subunit IVB [Bacillus amyloliquefaciens
TA208]
gi|328911592|gb|AEB63188.1| cytochrome c oxidase subunit IV [Bacillus amyloliquefaciens LL3]
Length = 110
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V ++L A+ Q+I L +F+HMS K
Sbjct: 25 MKYQVISFGLMIGLTLVAFLTVAADGIAGW-FTMPFLILLAVIQVIFQLFYFMHMSQKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ S+ + IF + + FV +W
Sbjct: 84 EAPSLFLYSGIFVAFITVLAFVTIIW 109
>gi|269940554|emb|CBI48933.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus
subsp. aureus TW20]
Length = 92
Score = 60.9 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ VGFI S++LT++ + + I A Q + L+ F+H++ +
Sbjct: 2 KHTVGFIASIVLTLLAVYVTLYTSLT-FQAKLTIIFGFAFVQAGLQLLMFMHLTEGKDGR 60
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+IF +++ VG+ WVM +
Sbjct: 61 LQTFKVIFALVITLCFVVGTYWVMQGGH 88
>gi|27904893|ref|NP_778019.1| cytochrome O ubiquinol oxidase protein CyoD [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|46395812|sp|Q89AA6|CYOD_BUCBP RecName: Full=Cytochrome o ubiquinol oxidase protein CyoD
gi|27904291|gb|AAO27124.1| cytochrome O ubiquinol oxidase protein CyoD [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 100
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 44/67 (65%)
Query: 43 FLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
+N + I++C QI+ H+ FFL++ +E W ++++IF++++ I +GS+WV+
Sbjct: 31 IFSRNYLYAFIIVCLFFQILAHIKFFLNLDFSLEQRWKLISVIFSLVVGLIILLGSIWVI 90
Query: 103 YHLNNNM 109
+LNNN+
Sbjct: 91 KNLNNNL 97
>gi|206978404|ref|ZP_03239274.1| cytochrome c oxidase, subunit IVB [Bacillus cereus H3081.97]
gi|217961426|ref|YP_002339994.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH187]
gi|222097389|ref|YP_002531446.1| cytochrome c oxidase, subunit iv [Bacillus cereus Q1]
gi|229031571|ref|ZP_04187571.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1271]
gi|229140669|ref|ZP_04269217.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST26]
gi|229174608|ref|ZP_04302137.1| Cytochrome c oxidase, subunit IV [Bacillus cereus MM3]
gi|229198057|ref|ZP_04324769.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1293]
gi|206743384|gb|EDZ54821.1| cytochrome c oxidase, subunit IVB [Bacillus cereus H3081.97]
gi|217066356|gb|ACJ80606.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH187]
gi|221241447|gb|ACM14157.1| cytochrome c oxidase, subunit IV [Bacillus cereus Q1]
gi|228585415|gb|EEK43521.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1293]
gi|228608860|gb|EEK66153.1| Cytochrome c oxidase, subunit IV [Bacillus cereus MM3]
gi|228642741|gb|EEK99024.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST26]
gi|228729860|gb|EEL80840.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1271]
gi|324327841|gb|ADY23101.1| cytochrome c oxidase, subunit IVB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 110
Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFAAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|57650251|ref|YP_185931.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus
COL]
gi|87161285|ref|YP_493658.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194755|ref|YP_499551.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|257795210|ref|ZP_05644189.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9781]
gi|269202669|ref|YP_003281938.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus
ED98]
gi|57284437|gb|AAW36531.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus
COL]
gi|87127259|gb|ABD21773.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202313|gb|ABD30123.1| quinol oxidase, subunit IV, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|257789182|gb|EEV27522.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9781]
gi|262074959|gb|ACY10932.1| quinol oxidase, subunit IV [Staphylococcus aureus subsp. aureus
ED98]
gi|283470269|emb|CAQ49480.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus ST398]
gi|302750883|gb|ADL65060.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|312829452|emb|CBX34294.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|323438881|gb|EGA96617.1| quinol oxidase polypeptide IV [Staphylococcus aureus O11]
gi|323441726|gb|EGA99370.1| quinol oxidase polypeptide IV [Staphylococcus aureus O46]
gi|329313727|gb|AEB88140.1| Probable quinol oxidase subunit 4 [Staphylococcus aureus subsp.
aureus T0131]
gi|329727950|gb|EGG64398.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus 21189]
gi|329728296|gb|EGG64735.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus 21172]
gi|329729021|gb|EGG65433.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus 21193]
Length = 92
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ VGFI S++LT++ + + + I A Q + L+ F+H++ +
Sbjct: 2 KHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFVQAGLQLLMFMHLTEGKDGR 60
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+IF +++ VG+ WVM +
Sbjct: 61 LQTFKVIFALVITLCFVVGTYWVMQGGH 88
>gi|291484041|dbj|BAI85116.1| cytochrome caa3 oxidase subunit IV [Bacillus subtilis subsp. natto
BEST195]
Length = 110
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LTI+ F V I+L A Q+I L +F+HM+ K
Sbjct: 25 MKYQVLSFGLMIGLTIVAFLTVATDGVGSW-FTIPFIILLAAIQVIFQLYYFMHMNQKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + +F + + FV +W
Sbjct: 84 EAPALFLYSGVFVAFITVLAFVTIIW 109
>gi|16078556|ref|NP_389375.1| cytochrome caa3 oxidase subunit IV [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309362|ref|ZP_03591209.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313689|ref|ZP_03595494.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318611|ref|ZP_03599905.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322885|ref|ZP_03604179.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315254|ref|YP_004207541.1| cytochrome c oxidase subunit IVB [Bacillus subtilis BSn5]
gi|117084|sp|P24013|COX4_BACSU RecName: Full=Cytochrome c oxidase subunit 4B; AltName:
Full=Caa-3605 subunit 4B; AltName: Full=Cytochrome aa3
subunit 4B; AltName: Full=Cytochrome c oxidase
polypeptide IVB
gi|39872|emb|CAA38079.1| cytochrome-c oxidase subunit IVB [Bacillus subtilis]
gi|2339995|emb|CAB11345.1| cytochrome c oxidase subunit IV, aa3 type [Bacillus subtilis subsp.
subtilis str. 168]
gi|2633863|emb|CAB13365.1| cytochrome caa3 oxidase (subunit IV) [Bacillus subtilis subsp.
subtilis str. 168]
gi|320021528|gb|ADV96514.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis BSn5]
Length = 110
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LTI+ F V I+L A Q+I L +F+HM+ K
Sbjct: 25 MKYQVLSFGLMIGLTIVAFLTVATDGVGSW-FTIPFIILLAAIQVIFQLYYFMHMNQKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + +F + + FV +W
Sbjct: 84 EAPALFLYSGVFVAFITVLAFVTIIW 109
>gi|73663042|ref|YP_301823.1| quinol oxidase polypeptide IV [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642234|sp|Q49WI1|QOX4_STAS1 RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|72495557|dbj|BAE18878.1| quinol oxidase polypeptide IV [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 96
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LTI+ + + N I A Q V L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTILAVFVTLYTSMA-LNAKITIIFGFAFIQAAVQLLMFMHLTESK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ ++F II+ I +G+ WVM +
Sbjct: 62 DGNLQTFKVLFAIIITLITVIGTYWVMQGGH 92
>gi|257427775|ref|ZP_05604173.1| CyoD protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257274616|gb|EEV06103.1| CyoD protein [Staphylococcus aureus subsp. aureus 65-1322]
Length = 92
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ VGFI S++LT++ + + + I A Q + L+ F+H++ +
Sbjct: 2 KHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFIQAGLQLLMFMHLTEGKDGR 60
Query: 79 WSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+IF +++ VG+ WVM +
Sbjct: 61 LQTFKVIFALVITLCFVVGTYWVMQGGH 88
>gi|330684199|gb|EGG95943.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis VCU121]
Length = 96
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + + I A Q V L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FHAKVTIIFGFAFIQAAVQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ +IF II+ VG+ WVM +++
Sbjct: 62 DGRVQSFKVIFAIIITLAIVVGTYWVMQGGHSH 94
>gi|15924048|ref|NP_371582.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926644|ref|NP_374177.1| hypothetical protein SA0910 [Staphylococcus aureus subsp. aureus
N315]
gi|21282670|ref|NP_645758.1| hypothetical protein MW0941 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485897|ref|YP_043118.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus
subsp. aureus MSSA476]
gi|82750668|ref|YP_416409.1| quinol oxidase polypeptide IV [Staphylococcus aureus RF122]
gi|148267550|ref|YP_001246493.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus JH9]
gi|150393606|ref|YP_001316281.1| cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus
subsp. aureus JH1]
gi|151221139|ref|YP_001331961.1| quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979381|ref|YP_001441640.1| hypothetical protein SAHV_1050 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509242|ref|YP_001574901.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141967|ref|ZP_03566460.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316215|ref|ZP_04839428.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731666|ref|ZP_04865831.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253732579|ref|ZP_04866744.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus TCH130]
gi|255005845|ref|ZP_05144446.2| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|258407081|ref|ZP_05680230.1| quinol oxidase subunit 4 [Staphylococcus aureus A9763]
gi|258421827|ref|ZP_05684748.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9719]
gi|258435225|ref|ZP_05688964.1| quinol oxidase polypeptide IV [Staphylococcus aureus A9299]
gi|258443320|ref|ZP_05691663.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8115]
gi|258446917|ref|ZP_05695070.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6300]
gi|258449895|ref|ZP_05697993.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6224]
gi|258454993|ref|ZP_05702956.1| quinol oxidase polypeptide IV [Staphylococcus aureus A5937]
gi|262049396|ref|ZP_06022269.1| hypothetical protein SAD30_2047 [Staphylococcus aureus D30]
gi|262052834|ref|ZP_06025020.1| hypothetical protein SA930_1112 [Staphylococcus aureus 930918-3]
gi|282894083|ref|ZP_06302314.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A8117]
gi|282925070|ref|ZP_06332731.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9765]
gi|282927279|ref|ZP_06334901.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A10102]
gi|284023984|ref|ZP_06378382.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus 132]
gi|294848045|ref|ZP_06788792.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A9754]
gi|295405862|ref|ZP_06815671.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8819]
gi|296277098|ref|ZP_06859605.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus MR1]
gi|297208308|ref|ZP_06924738.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245453|ref|ZP_06929324.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8796]
gi|300912384|ref|ZP_07129827.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381387|ref|ZP_07364039.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|81649532|sp|Q6GAF5|QOX4_STAAS RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|81704532|sp|Q7A184|QOX4_STAAW RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|81705893|sp|Q7A6A1|QOX4_STAAN RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|81781806|sp|Q99V39|QOX4_STAAM RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|123548916|sp|Q2YX17|QOX4_STAAB RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|125987514|sp|Q2FI20|QOX4_STAA3 RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|125987515|sp|Q2FZK2|QOX4_STAA8 RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|125987516|sp|Q5HH26|QOX4_STAAC RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|13700859|dbj|BAB42155.1| SA0910 [Staphylococcus aureus subsp. aureus N315]
gi|14246828|dbj|BAB57220.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204108|dbj|BAB94806.1| MW0941 [Staphylococcus aureus subsp. aureus MW2]
gi|49244340|emb|CAG42768.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus
subsp. aureus MSSA476]
gi|82656199|emb|CAI80612.1| probable quinol oxidase polypeptide IV [Staphylococcus aureus
RF122]
gi|147740619|gb|ABQ48917.1| Cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus JH9]
gi|149946058|gb|ABR51994.1| Cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus
subsp. aureus JH1]
gi|150373939|dbj|BAF67199.1| quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721516|dbj|BAF77933.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160368051|gb|ABX29022.1| possible cytochrome c oxidase subunit IV [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253724665|gb|EES93394.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253729357|gb|EES98086.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus TCH130]
gi|257841236|gb|EEV65681.1| quinol oxidase subunit 4 [Staphylococcus aureus A9763]
gi|257842160|gb|EEV66588.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9719]
gi|257848886|gb|EEV72869.1| quinol oxidase polypeptide IV [Staphylococcus aureus A9299]
gi|257851410|gb|EEV75349.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8115]
gi|257854249|gb|EEV77199.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6300]
gi|257856815|gb|EEV79718.1| quinol oxidase polypeptide IV [Staphylococcus aureus A6224]
gi|257862873|gb|EEV85638.1| quinol oxidase polypeptide IV [Staphylococcus aureus A5937]
gi|259159282|gb|EEW44340.1| hypothetical protein SA930_1112 [Staphylococcus aureus 930918-3]
gi|259162505|gb|EEW47074.1| hypothetical protein SAD30_2047 [Staphylococcus aureus D30]
gi|282590968|gb|EFB96043.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A10102]
gi|282592668|gb|EFB97676.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9765]
gi|282763569|gb|EFC03698.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A8117]
gi|285816736|gb|ADC37223.1| quinol oxidase polypeptide IV QoxD [Staphylococcus aureus 04-02981]
gi|294824845|gb|EFG41267.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A9754]
gi|294969297|gb|EFG45317.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8819]
gi|296887047|gb|EFH25950.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177756|gb|EFH37006.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8796]
gi|298694295|gb|ADI97517.1| probable quinol oxidase polypeptide IV [Staphylococcus aureus
subsp. aureus ED133]
gi|300886630|gb|EFK81832.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332668|gb|ADL22861.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus aureus
subsp. aureus JKD6159]
gi|304340062|gb|EFM06004.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315130358|gb|EFT86345.1| possible cytochrome c oxidase subunit IV [Staphylococcus aureus
subsp. aureus CGS03]
gi|315197481|gb|EFU27817.1| possible cytochrome c oxidase subunit IV [Staphylococcus aureus
subsp. aureus CGS01]
gi|320141126|gb|EFW32973.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320143183|gb|EFW34973.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus MRSA177]
Length = 96
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
T + VGFI S++LT++ + + + I A Q + L+ F+H++
Sbjct: 2 STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFVQAGLQLLMFMHLTEG 60
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ +IF +++ VG+ WVM +
Sbjct: 61 KDGRLQTFKVIFALVITLCFVVGTYWVMQGGH 92
>gi|223043905|ref|ZP_03613947.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus capitis
SK14]
gi|314933254|ref|ZP_07840619.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus caprae
C87]
gi|222442809|gb|EEE48912.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus capitis
SK14]
gi|313653404|gb|EFS17161.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus caprae
C87]
Length = 96
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + + I A Q V L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FHAKVTIIFGFAFIQAAVQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ +IF II+ +G+ WVM +++
Sbjct: 62 DGRVQSFKVIFAIIITLAIVIGTYWVMQGGHSH 94
>gi|49483222|ref|YP_040446.1| quinol oxidase polypeptide IV [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425112|ref|ZP_05601538.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257430409|ref|ZP_05606791.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus
68-397]
gi|257433112|ref|ZP_05609470.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus E1410]
gi|257436010|ref|ZP_05612057.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M876]
gi|258423559|ref|ZP_05686449.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9635]
gi|282903607|ref|ZP_06311495.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus C160]
gi|282905377|ref|ZP_06313232.1| cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908349|ref|ZP_06316180.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282910636|ref|ZP_06318439.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282913833|ref|ZP_06321620.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M899]
gi|282916309|ref|ZP_06324071.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus D139]
gi|282918758|ref|ZP_06326493.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus C427]
gi|282923880|ref|ZP_06331556.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus C101]
gi|283770121|ref|ZP_06343013.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus H19]
gi|283957804|ref|ZP_06375255.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293500871|ref|ZP_06666722.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus 58-424]
gi|293509827|ref|ZP_06668536.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M809]
gi|293526413|ref|ZP_06671098.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M1015]
gi|295427547|ref|ZP_06820179.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297591502|ref|ZP_06950140.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus MN8]
gi|81651376|sp|Q6GI26|QOX4_STAAR RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|49241351|emb|CAG40035.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus
subsp. aureus MRSA252]
gi|257272088|gb|EEV04220.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257278537|gb|EEV09156.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus
68-397]
gi|257281205|gb|EEV11342.1| cytochrome c oxidase subunit IV [Staphylococcus aureus subsp.
aureus E1410]
gi|257284292|gb|EEV14412.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M876]
gi|257846260|gb|EEV70284.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A9635]
gi|282313852|gb|EFB44244.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus C101]
gi|282316568|gb|EFB46942.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus C427]
gi|282319749|gb|EFB50097.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus D139]
gi|282321901|gb|EFB52225.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M899]
gi|282325241|gb|EFB55550.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282328014|gb|EFB58296.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330669|gb|EFB60183.1| cytochrome aa3 quinol oxidase subunit IV [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282595225|gb|EFC00189.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus C160]
gi|283460268|gb|EFC07358.1| quinol oxidase subunit 4 [Staphylococcus aureus subsp. aureus H19]
gi|283789953|gb|EFC28770.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290920485|gb|EFD97548.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M1015]
gi|291095876|gb|EFE26137.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus 58-424]
gi|291467277|gb|EFF09794.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
subsp. aureus M809]
gi|295127905|gb|EFG57539.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297576388|gb|EFH95104.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus MN8]
gi|312438567|gb|ADQ77638.1| quinol oxidase subunit IV [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193726|gb|EFU24121.1| putative quinol oxidase polypeptide IV [Staphylococcus aureus
subsp. aureus CGS00]
Length = 96
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
T + VGFI S++LT++ + + + I A Q + L+ F+H++
Sbjct: 2 STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFIQAGLQLLMFMHLTEG 60
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ +IF +++ VG+ WVM +
Sbjct: 61 KDGRLQTFKVIFALVITLCFVVGTYWVMQGGH 92
>gi|258451993|ref|ZP_05700009.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A5948]
gi|257860208|gb|EEV83040.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus aureus
A5948]
Length = 96
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
T + VGFI S++LT++ + + + I A Q + L+ F+H++
Sbjct: 2 STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLT-IIFGFAFVQAGLQLLMFMHLTEG 60
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ +IF +++ VG+ WVM +
Sbjct: 61 KDGRLQTFKVIFALVITLCFIVGTYWVMQGGH 92
>gi|229075697|ref|ZP_04208679.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-18]
gi|229098411|ref|ZP_04229356.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-29]
gi|229117437|ref|ZP_04246813.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-3]
gi|228666047|gb|EEL21513.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-3]
gi|228685028|gb|EEL38961.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-29]
gi|228707473|gb|EEL59664.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-18]
Length = 110
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|47565816|ref|ZP_00236855.1| cytochrome o ubiquinol oxidase, protein CyoD, putative [Bacillus
cereus G9241]
gi|75762089|ref|ZP_00741995.1| Cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218899097|ref|YP_002447508.1| cytochrome c oxidase, subunit IVB [Bacillus cereus G9842]
gi|228902447|ref|ZP_04066601.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 4222]
gi|228909767|ref|ZP_04073590.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 200]
gi|228941102|ref|ZP_04103658.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228966962|ref|ZP_04128000.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228974034|ref|ZP_04134607.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980626|ref|ZP_04140934.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis Bt407]
gi|228987084|ref|ZP_04147209.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157518|ref|ZP_04285595.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 4342]
gi|47557096|gb|EAL15425.1| cytochrome o ubiquinol oxidase, protein CyoD, putative [Bacillus
cereus G9241]
gi|74490423|gb|EAO53733.1| Cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218545539|gb|ACK97933.1| cytochrome c oxidase, subunit IVB [Bacillus cereus G9842]
gi|228625968|gb|EEK82718.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 4342]
gi|228772678|gb|EEM21119.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228779094|gb|EEM27353.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis Bt407]
gi|228785670|gb|EEM33676.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792696|gb|EEM40260.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228818555|gb|EEM64624.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228850056|gb|EEM94887.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 200]
gi|228857191|gb|EEN01697.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis IBL 4222]
gi|326941713|gb|AEA17609.1| cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 110
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|152974414|ref|YP_001373931.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023166|gb|ABS20936.1| Cytochrome aa3 quinol oxidase subunit IV [Bacillus cytotoxicus NVH
391-98]
Length = 98
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
N G + GFILSL LT + + + ++ I A+AQ + LV F+
Sbjct: 5 NQAHSGFPWSHVFGFILSLALTFLALYVALYTSLPLSTVLTSII-AMAVAQAALQLVMFM 63
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
HM E +AM+F+ + + G++W+ + +
Sbjct: 64 HMKEG-EGIAQTIAMLFSFFIAVVTVAGTVWIFFSM 98
>gi|30264012|ref|NP_846389.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Ames]
gi|47529449|ref|YP_020798.1| cytochrome c oxidase subunit IVB [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186851|ref|YP_030103.1| cytochrome c oxidase subunit IVB [Bacillus anthracis str. Sterne]
gi|49479382|ref|YP_038003.1| cytochrome c oxidase subunit IV [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141546|ref|YP_085282.1| cytochrome c oxidase, subunit IV [Bacillus cereus E33L]
gi|65321336|ref|ZP_00394295.1| COG3125: Heme/copper-type cytochrome/quinol oxidase, subunit 4
[Bacillus anthracis str. A2012]
gi|165872200|ref|ZP_02216839.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0488]
gi|167633708|ref|ZP_02392032.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0442]
gi|167641026|ref|ZP_02399283.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0193]
gi|170688777|ref|ZP_02879981.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0465]
gi|170705699|ref|ZP_02896162.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0389]
gi|177654357|ref|ZP_02936286.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0174]
gi|190565970|ref|ZP_03018889.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis
Tsiankovskii-I]
gi|196035905|ref|ZP_03103307.1| cytochrome c oxidase, subunit IVB [Bacillus cereus W]
gi|196038632|ref|ZP_03105940.1| cytochrome c oxidase, subunit IVB [Bacillus cereus NVH0597-99]
gi|196045812|ref|ZP_03113041.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB108]
gi|218905072|ref|YP_002452906.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH820]
gi|225865923|ref|YP_002751301.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB102]
gi|227816715|ref|YP_002816724.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. CDC 684]
gi|228916578|ref|ZP_04080144.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928988|ref|ZP_04092020.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935256|ref|ZP_04098082.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947660|ref|ZP_04109950.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229092990|ref|ZP_04224121.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-42]
gi|229123462|ref|ZP_04252661.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 95/8201]
gi|229186181|ref|ZP_04313350.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BGSC 6E1]
gi|229604459|ref|YP_002868241.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0248]
gi|254683708|ref|ZP_05147568.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str.
CNEVA-9066]
gi|254721543|ref|ZP_05183332.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A1055]
gi|254736053|ref|ZP_05193759.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Western
North America USA6153]
gi|254743944|ref|ZP_05201627.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Kruger
B]
gi|254754277|ref|ZP_05206312.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Vollum]
gi|254758032|ref|ZP_05210059.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str.
Australia 94]
gi|301055432|ref|YP_003793643.1| cytochrome c oxidase subunit IV [Bacillus anthracis CI]
gi|30258657|gb|AAP27875.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Ames]
gi|47504597|gb|AAT33273.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180778|gb|AAT56154.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. Sterne]
gi|49330938|gb|AAT61584.1| cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975015|gb|AAU16565.1| cytochrome c oxidase, subunit IV [Bacillus cereus E33L]
gi|164712147|gb|EDR17685.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0488]
gi|167511076|gb|EDR86465.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0193]
gi|167531114|gb|EDR93801.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0442]
gi|170129239|gb|EDS98103.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0389]
gi|170667293|gb|EDT18052.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0465]
gi|172080847|gb|EDT65928.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0174]
gi|190562889|gb|EDV16855.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis
Tsiankovskii-I]
gi|195991554|gb|EDX55520.1| cytochrome c oxidase, subunit IVB [Bacillus cereus W]
gi|196023252|gb|EDX61930.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB108]
gi|196030355|gb|EDX68954.1| cytochrome c oxidase, subunit IVB [Bacillus cereus NVH0597-99]
gi|218538510|gb|ACK90908.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH820]
gi|225788317|gb|ACO28534.1| cytochrome c oxidase, subunit IVB [Bacillus cereus 03BB102]
gi|227005660|gb|ACP15403.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. CDC 684]
gi|228597357|gb|EEK55008.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BGSC 6E1]
gi|228659949|gb|EEL15590.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 95/8201]
gi|228690361|gb|EEL44147.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-42]
gi|228812180|gb|EEM58511.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824421|gb|EEM70227.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830795|gb|EEM76400.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843157|gb|EEM88239.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268867|gb|ACQ50504.1| cytochrome c oxidase, subunit IVB [Bacillus anthracis str. A0248]
gi|300377601|gb|ADK06505.1| cytochrome c oxidase, subunit IV [Bacillus cereus biovar anthracis
str. CI]
Length = 110
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|70726905|ref|YP_253819.1| hypothetical protein SH1904 [Staphylococcus haemolyticus JCSC1435]
gi|123659872|sp|Q4L562|QOX4_STAHJ RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|68447629|dbj|BAE05213.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 96
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + I A Q V L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTT-IIFGFAFIQAAVQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ +IF II+ + +G+ WVM +++
Sbjct: 62 DGQVQSFKVIFAIIITLVTVIGTYWVMQGGHSH 94
>gi|239826489|ref|YP_002949113.1| cytochrome C oxidase subunit IV [Geobacillus sp. WCH70]
gi|239806782|gb|ACS23847.1| cytochrome c oxidase, subunit IV [Geobacillus sp. WCH70]
Length = 110
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F+L ++ T+I F V F I+L A+ Q++ L +F+HMS K
Sbjct: 25 MKHQVISFVLMILFTLIAFTAVGYDKFSPW-FSVPFILLLAVVQVLFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVGSMW 100
+ ++ ++ I+VA ++W
Sbjct: 84 EMPAL--FMYGGILVAFV---TIW 102
>gi|205373049|ref|ZP_03225855.1| CtaF [Bacillus coahuilensis m4-4]
Length = 109
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ +V F L + LT++ F V GF + + I+L A+ Q+I L +F+HMS K
Sbjct: 25 MRMQVVTFALMIFLTLVAFIAVAGGF--SEWFIFPFILLLAVIQVIFQLYYFMHMSHKGH 82
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ ++ + F + + F+ +W+
Sbjct: 83 EAPALFLYSGAFVAFLTVLAFITIVWI 109
>gi|317129343|ref|YP_004095625.1| cytochrome C oxidase subunit IV [Bacillus cellulosilyticus DSM
2522]
gi|315474291|gb|ADU30894.1| cytochrome C oxidase subunit IV [Bacillus cellulosilyticus DSM
2522]
Length = 116
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ L+ F+ + LT + F + I+L A+ Q+++ L F+H++ +
Sbjct: 28 MRKQLISFVFMIFLTSMAFISIASDAI-PATFAIPFILLLAVIQVVLQLYVFMHLNERGN 86
Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99
+IM I+T +++AI V ++
Sbjct: 87 GWTNIM--IWTGVLIAILTVATL 107
>gi|242242362|ref|ZP_04796807.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis W23144]
gi|242234169|gb|EES36481.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis W23144]
gi|319401615|gb|EFV89825.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis FRI909]
Length = 96
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + + I A Q + L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMT-FHAKVTIIFGFAFIQAALQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ +IF II+ I +G+ WVM +
Sbjct: 62 DGRLQSFKVIFAIIITLITVIGTYWVMQGGH 92
>gi|289551130|ref|YP_003472034.1| quinol oxidase polypeptide IV QoxD [Staphylococcus lugdunensis
HKU09-01]
gi|315658631|ref|ZP_07911501.1| quinol oxidase subunit IV [Staphylococcus lugdunensis M23590]
gi|289180662|gb|ADC87907.1| quinol oxidase polypeptide IV QoxD [Staphylococcus lugdunensis
HKU09-01]
gi|315496262|gb|EFU84587.1| quinol oxidase subunit IV [Staphylococcus lugdunensis M23590]
Length = 96
Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + +GFI S++LT++ + + + I A Q + L+ F+H++
Sbjct: 3 TIVKHTIGFIASIVLTLLAVFVTLYTTLT-FHAKVTIIFGFAFIQAALQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ +IF II+ + +G+ WVM +++
Sbjct: 62 DGQVQSFKVIFAIIITLVTVIGTYWVMQGGHSH 94
>gi|228474443|ref|ZP_04059178.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis
SK119]
gi|314936751|ref|ZP_07844098.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis
subsp. hominis C80]
gi|228271802|gb|EEK13149.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis
SK119]
gi|313655370|gb|EFS19115.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus hominis
subsp. hominis C80]
Length = 96
Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + I A Q + L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKTT-IIFGFAFIQAALQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ +IF II+ I +G+ WVM +
Sbjct: 62 DGRLQSAKVIFAIIITLITVIGTYWVMQGGH 92
>gi|228922692|ref|ZP_04085991.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836966|gb|EEM82308.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 110
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MRHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|242373278|ref|ZP_04818852.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis
M23864:W1]
gi|242348988|gb|EES40590.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis
M23864:W1]
Length = 96
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + + I A Q V L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FHAKVTIIFGFAFIQAAVQLLMFMHLTEGR 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ +IF II+ +G+ WVM +++
Sbjct: 62 DGRLQSFKVIFAIIITLAIVIGTYWVMQGGHSH 94
>gi|229019143|ref|ZP_04175977.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1273]
gi|229025386|ref|ZP_04181804.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1272]
gi|228735971|gb|EEL86548.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1272]
gi|228742159|gb|EEL92325.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH1273]
Length = 110
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAFPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|149181711|ref|ZP_01860203.1| CtaF [Bacillus sp. SG-1]
gi|148850559|gb|EDL64717.1| CtaF [Bacillus sp. SG-1]
Length = 110
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ +V F L + LT++ F V G K + I+L A+ Q+I L +F+HMS K
Sbjct: 26 MRMQVVSFALMIFLTLVAFVAV--GGGFSKWFVVPFILLLAVVQLIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ ++ + + + F+ +W+
Sbjct: 84 EAPALFLYSGALVAFITVLTFLTIVWI 110
>gi|27467674|ref|NP_764311.1| putative quinol oxidase polypeptide IV QoxD [Staphylococcus
epidermidis ATCC 12228]
gi|57866535|ref|YP_188228.1| quinol oxidase, subunit IV [Staphylococcus epidermidis RP62A]
gi|251810511|ref|ZP_04824984.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876584|ref|ZP_06285449.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis SK135]
gi|293366954|ref|ZP_06613629.1| quinol oxidase subunit IV [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675020|sp|Q5HQB2|QOX4_STAEQ RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|81842949|sp|Q8CPP9|QOX4_STAES RecName: Full=Probable quinol oxidase subunit 4; AltName:
Full=Quinol oxidase polypeptide IV
gi|27315218|gb|AAO04353.1|AE016746_143 putative quinol oxidase polypeptide IV QoxD [Staphylococcus
epidermidis ATCC 12228]
gi|57637193|gb|AAW53981.1| quinol oxidase, subunit IV [Staphylococcus epidermidis RP62A]
gi|251805922|gb|EES58579.1| cytochrome c oxidase subunit IV [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294672|gb|EFA87201.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis SK135]
gi|291318929|gb|EFE59300.1| quinol oxidase subunit IV [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329732860|gb|EGG69206.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis VCU144]
gi|329734218|gb|EGG70534.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis VCU028]
gi|329735521|gb|EGG71809.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus
epidermidis VCU045]
Length = 96
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + + I A Q + L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTNMT-FHAKVTIIFGFAFIQAALQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLN 106
+ +IF II+ + +G+ WVM +
Sbjct: 62 DGRLQSFKVIFAIIITLVTVIGTYWVMQGGH 92
>gi|42783036|ref|NP_980283.1| cytochrome c oxidase, subunit IVB [Bacillus cereus ATCC 10987]
gi|42738963|gb|AAS42891.1| cytochrome c oxidase, subunit IVB [Bacillus cereus ATCC 10987]
Length = 110
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|296331067|ref|ZP_06873541.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674222|ref|YP_003865894.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151711|gb|EFG92586.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412466|gb|ADM37585.1| cytochrome c oxidase, subunit IVB [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 110
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LTI+ F V I+L A Q+I L +F+HM+ K
Sbjct: 25 MKYQVLSFGLMIGLTIVAFLTVATDGVGSW-FTIPFIILLAAIQVIFQLYYFMHMNQKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + +F + + FV +W
Sbjct: 84 EAPAMFLYSGMFVAFITVLAFVTIIW 109
>gi|319649711|ref|ZP_08003867.1| CtaF protein [Bacillus sp. 2_A_57_CT2]
gi|317398873|gb|EFV79555.1| CtaF protein [Bacillus sp. 2_A_57_CT2]
Length = 111
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LTI+ F F + I++ AI Q+I L +F+HMS K
Sbjct: 26 MKHQVITFALMIFLTIVAFVAAGYEGFSGW-FIVPFILILAIVQVIFQLYYFMHMSHKGH 84
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + + I F+ +W
Sbjct: 85 EAPALFLYSGALVGFITIIAFLTVIW 110
>gi|224476168|ref|YP_002633774.1| putative quinol oxidase polypeptide IV [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420775|emb|CAL27589.1| putative quinol oxidase polypeptide IV [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 96
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + N I A Q + L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSLT-LNAKITIIFGFAFIQAALQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ +IF II+ + +GS WVM ++ M
Sbjct: 62 DGQAQSFKVIFAIIITLVTVIGSYWVMVGGHSAHM 96
>gi|172057994|ref|YP_001814454.1| cytochrome C oxidase subunit IV [Exiguobacterium sibiricum 255-15]
gi|171990515|gb|ACB61437.1| cytochrome C oxidase subunit IV [Exiguobacterium sibiricum 255-15]
Length = 109
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 20 CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGW 79
L F L + LT+I FG VM I + AI Q+ + L F+HM+ K
Sbjct: 28 QLTSFALMIFLTLIAFGAVMAELMPHWAAGGFLI-IMAIVQVYLQLYMFMHMNNKGNTWV 86
Query: 80 SIMAM--IFTIIMVAICFVGSMW 100
+M IF + + +W
Sbjct: 87 KVMMALGIFVALTIVATLRLLIW 109
>gi|157692165|ref|YP_001486627.1| cytochrome-c oxidase subunit IV [Bacillus pumilus SAFR-032]
gi|194014575|ref|ZP_03053192.1| cytochrome c oxidase, subunit IV [Bacillus pumilus ATCC 7061]
gi|157680923|gb|ABV62067.1| cytochrome-c oxidase subunit IV [Bacillus pumilus SAFR-032]
gi|194013601|gb|EDW23166.1| cytochrome c oxidase, subunit IV [Bacillus pumilus ATCC 7061]
Length = 109
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K L+ F L + LT + F + + I+L A+ Q+ L +F+HM+ K
Sbjct: 24 MKHQLISFGLMIGLTFVAFLTIASEDVGNW-FAVPFILLLAVIQVAFQLYYFMHMNQKGH 82
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + +F + + F+ +W
Sbjct: 83 ETPALFLYSGVFVAFITVLAFLTIIW 108
>gi|52080095|ref|YP_078886.1| cytochrome caa3 oxidase subunit IV [Bacillus licheniformis ATCC
14580]
gi|52785469|ref|YP_091298.1| CtaF [Bacillus licheniformis ATCC 14580]
gi|319646130|ref|ZP_08000360.1| CtaF protein [Bacillus sp. BT1B_CT2]
gi|52003306|gb|AAU23248.1| cytochrome caa3 oxidase (subunit IV) [Bacillus licheniformis ATCC
14580]
gi|52347971|gb|AAU40605.1| CtaF [Bacillus licheniformis ATCC 14580]
gi|317391880|gb|EFV72677.1| CtaF protein [Bacillus sp. BT1B_CT2]
Length = 109
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F L + LTI+ F V I+L A+ Q+ L +F+HMS +
Sbjct: 25 MRYQVISFGLMIGLTIVAFLTVASDA--GVWFTVPFILLLAVIQVAFQLYYFMHMSQRGH 82
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + + + + FV +W
Sbjct: 83 EAPTLFLYSGVLVAFVTVLAFVTLIW 108
>gi|206971011|ref|ZP_03231962.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH1134]
gi|218236053|ref|YP_002368741.1| cytochrome c oxidase, subunit IVB [Bacillus cereus B4264]
gi|228954217|ref|ZP_04116245.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960202|ref|ZP_04121859.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047626|ref|ZP_04193215.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH676]
gi|229071440|ref|ZP_04204662.1| Cytochrome c oxidase, subunit IV [Bacillus cereus F65185]
gi|229081193|ref|ZP_04213703.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-2]
gi|229111411|ref|ZP_04240963.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-15]
gi|229129218|ref|ZP_04258191.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-Cer4]
gi|229146512|ref|ZP_04274883.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST24]
gi|229152139|ref|ZP_04280333.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1550]
gi|229180216|ref|ZP_04307560.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 172560W]
gi|229192149|ref|ZP_04319117.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 10876]
gi|296504435|ref|YP_003666135.1| cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis
BMB171]
gi|206733783|gb|EDZ50954.1| cytochrome c oxidase, subunit IVB [Bacillus cereus AH1134]
gi|218164010|gb|ACK64002.1| cytochrome c oxidase, subunit IVB [Bacillus cereus B4264]
gi|228591356|gb|EEK49207.1| Cytochrome c oxidase, subunit IV [Bacillus cereus ATCC 10876]
gi|228603425|gb|EEK60902.1| Cytochrome c oxidase, subunit IV [Bacillus cereus 172560W]
gi|228631331|gb|EEK87966.1| Cytochrome c oxidase, subunit IV [Bacillus cereus m1550]
gi|228637145|gb|EEK93604.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST24]
gi|228654455|gb|EEL10320.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-Cer4]
gi|228672027|gb|EEL27319.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock1-15]
gi|228702237|gb|EEL54713.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock4-2]
gi|228711731|gb|EEL63684.1| Cytochrome c oxidase, subunit IV [Bacillus cereus F65185]
gi|228723720|gb|EEL75076.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH676]
gi|228799470|gb|EEM46430.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805537|gb|EEM52128.1| Cytochrome c oxidase, subunit IV [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|296325487|gb|ADH08415.1| cytochrome c oxidase polypeptide IVB [Bacillus thuringiensis
BMB171]
Length = 110
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MRHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|229162875|ref|ZP_04290832.1| Cytochrome c oxidase, subunit IV [Bacillus cereus R309803]
gi|228620757|gb|EEK77626.1| Cytochrome c oxidase, subunit IV [Bacillus cereus R309803]
Length = 110
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVG 97
+ S +++ +++ + +
Sbjct: 84 EAASF--FLYSGLLIGLITIL 102
>gi|222150985|ref|YP_002560138.1| hypothetical protein MCCL_0735 [Macrococcus caseolyticus JCSC5402]
gi|222120107|dbj|BAH17442.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 115
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ + F + + LT + F +V G L K + ++L A+ Q+I+ +F+HM K
Sbjct: 26 MRMQVTTFAIMIFLTFVAFAMVAAG--LSKEFVIPAVLLLALIQVILQFYYFMHMKHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVM 102
+ ++ + GS VM
Sbjct: 84 GTAQLF------MLTGLFIAGSFIVM 103
>gi|229104503|ref|ZP_04235170.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-28]
gi|228678945|gb|EEL33155.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-28]
Length = 100
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 14 MKHQVITFALMIFLTLVAFVAVAYPKTFSPTFSVPFILLLAVVQVIFQLYYFMHMSHKGH 73
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 74 EAASFFLYSGLLIGLITILAFMTIVWI 100
>gi|138894620|ref|YP_001125073.1| cytochrome caa3-type oxidase IV [Geobacillus thermodenitrificans
NG80-2]
gi|196247771|ref|ZP_03146473.1| cytochrome c oxidase, subunit IV [Geobacillus sp. G11MC16]
gi|1841880|dbj|BAA11114.1| cytochrome c oxidase subunit IV [Geobacillus stearothermophilus]
gi|134266133|gb|ABO66328.1| Cytochrome caa3-type oxidase IV [Geobacillus thermodenitrificans
NG80-2]
gi|196212555|gb|EDY07312.1| cytochrome c oxidase, subunit IV [Geobacillus sp. G11MC16]
Length = 110
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K
Sbjct: 25 MRHQVIAFVLMILLTLIAFAAVGYEEFSHW-FVIPFILLLAGVQVAFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVGS 98
+ ++ ++M+ + + S
Sbjct: 84 EFPALFIYGGVLVMLVLVWAFS 105
>gi|311029887|ref|ZP_07707977.1| cytochrome c oxidase, subunit IVB [Bacillus sp. m3-13]
Length = 110
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K +V F+L + LT++ F V G + K + I+L AI Q I L +F+HM+ K
Sbjct: 26 MKYQVVSFVLMIFLTLLAFLAV--GAEMSKYFIVPFIILMAIVQCIFQLYYFMHMNHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + + ++ + F +W
Sbjct: 84 ETPALFLYSGLAVGLITILAFTTIIW 109
>gi|152976355|ref|YP_001375872.1| cytochrome c oxidase subunit IV [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025107|gb|ABS22877.1| Cytochrome c oxidase subunit IV bacillaceae [Bacillus cytotoxicus
NVH 391-98]
Length = 112
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LTI+ F V I+L A+ Q+I L +F+HMS K
Sbjct: 26 MKHQVITFGLMIFLTIVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLYYFMHMSHKGH 85
Query: 77 DGWSIM 82
+ S
Sbjct: 86 EAASFF 91
>gi|30022029|ref|NP_833660.1| cytochrome c oxidase polypeptide IVB [Bacillus cereus ATCC 14579]
gi|29897585|gb|AAP10861.1| Cytochrome c oxidase polypeptide IVB [Bacillus cereus ATCC 14579]
Length = 110
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MRHQVITFALMIFLTLVAFVAVAYPKTFSPIFSVPFILLLAVVQVIFQLCYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMWV 101
+ S + + ++ + F+ +W+
Sbjct: 84 EAASFFLYSGLLIGLITILAFMTIVWI 110
>gi|229086505|ref|ZP_04218677.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-44]
gi|228696822|gb|EEL49635.1| Cytochrome c oxidase, subunit IV [Bacillus cereus Rock3-44]
Length = 112
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F L + LTI+ F V I+L A+ Q+I L +F+HMS K
Sbjct: 26 MRHQVITFGLMIFLTIVAFAAVAYPKTFSPLFSVPFILLLAVVQVIFQLYYFMHMSHKGH 85
Query: 77 DGWSIM 82
+ S
Sbjct: 86 EAASFF 91
>gi|255020825|ref|ZP_05292881.1| hypothetical protein ACA_1047 [Acidithiobacillus caldus ATCC 51756]
gi|254969616|gb|EET27122.1| hypothetical protein ACA_1047 [Acidithiobacillus caldus ATCC 51756]
Length = 87
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 31 TIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIM 90
+I +V ++ I +CA I + F LH+ + W+ ++++ I +
Sbjct: 1 MLIATFLVSSHAAPPFGLLL-VITVCAGIATIAQIYFLLHIDISEHNIWNTVSLVAFIPL 59
Query: 91 VAICFVGSMWVMYHLNNNMMSMEGMRSIH 119
+ + W+ L M M +H
Sbjct: 60 FVLTIGLTWWMFSQLYLRTMPP--MPGMH 86
>gi|163941680|ref|YP_001646564.1| cytochrome c oxidase subunit IV [Bacillus weihenstephanensis
KBAB4]
gi|229013146|ref|ZP_04170290.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides DSM 2048]
gi|229061604|ref|ZP_04198946.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH603]
gi|229134749|ref|ZP_04263558.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST196]
gi|229168680|ref|ZP_04296402.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH621]
gi|163863877|gb|ABY44936.1| Cytochrome c oxidase subunit IV bacillaceae [Bacillus
weihenstephanensis KBAB4]
gi|228614836|gb|EEK71939.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH621]
gi|228648795|gb|EEL04821.1| Cytochrome c oxidase, subunit IV [Bacillus cereus BDRD-ST196]
gi|228717695|gb|EEL69348.1| Cytochrome c oxidase, subunit IV [Bacillus cereus AH603]
gi|228748096|gb|EEL97957.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides DSM 2048]
Length = 110
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K +V F L + LT++ F V I+L A+ Q+I L +F+HMS K
Sbjct: 24 MKHQVVTFSLMIFLTLVAFAAVAYPKTFSPIFSVPFILLLAVIQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIM 82
+ S
Sbjct: 84 EAASFF 89
>gi|295399680|ref|ZP_06809661.1| cytochrome c oxidase, subunit IV [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978083|gb|EFG53680.1| cytochrome c oxidase, subunit IV [Geobacillus thermoglucosidasius
C56-YS93]
Length = 110
Score = 55.5 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L ++LT+I F V F I+L AI Q++ L +F+HMS K
Sbjct: 25 MKHQVISFTLMILLTLISFFAVGYDKFSHW-FSVPFILLLAIVQVMFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + +F + F +W
Sbjct: 84 EIPAMFMYSGMFVTFLTVWAFATIVW 109
>gi|228989831|ref|ZP_04149811.1| Quinol oxidase, subunit IV [Bacillus pseudomycoides DSM 12442]
gi|228996022|ref|ZP_04155677.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock3-17]
gi|229003638|ref|ZP_04161453.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock1-4]
gi|228757604|gb|EEM06834.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock1-4]
gi|228763718|gb|EEM12610.1| Quinol oxidase, subunit IV [Bacillus mycoides Rock3-17]
gi|228769978|gb|EEM18561.1| Quinol oxidase, subunit IV [Bacillus pseudomycoides DSM 12442]
Length = 101
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTK 74
G + GFILSL LT + + + I+ I++ A+AQ + V F+HM+
Sbjct: 13 GFPWSHVFGFILSLALTFLAVYVTLYTSLPLSTILTA-ILVMAVAQAALQFVMFMHMTEG 71
Query: 75 VEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
E + ++F + A+ VG++W+ + +
Sbjct: 72 -EGVIQTITIVFHFFIAAVTVVGTVWIFFSM 101
>gi|212639691|ref|YP_002316211.1| cytochrome caa3 oxidase subunit IV [Anoxybacillus flavithermus WK1]
gi|212561171|gb|ACJ34226.1| Cytochrome caa3 oxidase (subunit IV) [Anoxybacillus flavithermus
WK1]
Length = 110
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L + LT+I F V F I+L A+ Q+I L +F+HMS K
Sbjct: 25 MKHQIISFTLMIFLTLIAFFAVGYEGFSAW-FSVPFILLLAVVQVIFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAM--IFTIIMVAICFVGSMWV 101
+ ++ + + F+ +W+
Sbjct: 84 ELPALFIYGGVAVAFVTIWAFLTVVWI 110
>gi|228992677|ref|ZP_04152603.1| Cytochrome c oxidase, subunit IV [Bacillus pseudomycoides DSM
12442]
gi|228998721|ref|ZP_04158308.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock3-17]
gi|229006223|ref|ZP_04163909.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock1-4]
gi|228755064|gb|EEM04423.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock1-4]
gi|228761189|gb|EEM10148.1| Cytochrome c oxidase, subunit IV [Bacillus mycoides Rock3-17]
gi|228767009|gb|EEM15646.1| Cytochrome c oxidase, subunit IV [Bacillus pseudomycoides DSM
12442]
Length = 112
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F L + LTI+ F V I+L A+ Q+I L +F+HMS K
Sbjct: 26 MRHQVITFGLMIFLTIVAFVAVAYPKTFSPLFSVPFILLLAVVQVIFQLYYFMHMSHKGH 85
Query: 77 DGWSIM 82
+ +
Sbjct: 86 EAATFF 91
>gi|461802|sp|Q03440|COX4_BACP3 RecName: Full=Cytochrome c oxidase subunit 4B; AltName:
Full=Cytochrome aa3 subunit 4B; AltName: Full=Cytochrome
c oxidase polypeptide IVB
gi|77451|pir||JX0143 cytochrome-c oxidase (EC 1.9.3.1) chain IV precursor - thermophilic
bacterium PS-3
gi|217152|dbj|BAA03048.1| cytochrome c oxidase subunit 4 [Bacillus sp. PS3]
Length = 110
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K
Sbjct: 25 MRHQMIAFVLMILLTLIAFAAVGYEEFSHW-FVVPFILLLAAVQVAFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVGS 98
+ ++ +M+ + + +
Sbjct: 84 EFPAMFIYGGVAVMLLLVWAFT 105
>gi|261419282|ref|YP_003252964.1| cytochrome C oxidase subunit IV [Geobacillus sp. Y412MC61]
gi|297530748|ref|YP_003672023.1| cytochrome C oxidase subunit IV [Geobacillus sp. C56-T3]
gi|319766098|ref|YP_004131599.1| cytochrome C oxidase subunit IV [Geobacillus sp. Y412MC52]
gi|261375739|gb|ACX78482.1| cytochrome c oxidase, subunit IV [Geobacillus sp. Y412MC61]
gi|297254000|gb|ADI27446.1| cytochrome c oxidase, subunit IV [Geobacillus sp. C56-T3]
gi|317110964|gb|ADU93456.1| cytochrome c oxidase, subunit IV [Geobacillus sp. Y412MC52]
Length = 110
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K
Sbjct: 25 MRHQMIAFVLMILLTLIAFAAVGYEEFSHW-FVVPFILLLAAVQVAFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVGS 98
+ ++ +M+ + + +
Sbjct: 84 EFPAMFIYGGVAVMLLLVWAFT 105
>gi|56419620|ref|YP_146938.1| cytochrome c oxidase subunit IV [Geobacillus kaustophilus HTA426]
gi|56379462|dbj|BAD75370.1| cytochrome c oxidase subunit IV [Geobacillus kaustophilus HTA426]
Length = 110
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ ++ F+L ++LT+I F V F + I+L A Q+ L +F+HMS K
Sbjct: 25 MRHQMIAFVLMILLTLIAFAAVGYEEFSHW-FVVPFILLLAAVQVAFQLYYFMHMSHKGH 83
Query: 77 DGWSIMAMIFTIIMVAICFVGS 98
+ ++ +M+ + + +
Sbjct: 84 EFPAMFIYGGVAVMLLLVWAFT 105
>gi|295703492|ref|YP_003596567.1| cytochrome c oxidase subunit IV [Bacillus megaterium DSM 319]
gi|294801151|gb|ADF38217.1| cytochrome c oxidase, subunit IV [Bacillus megaterium DSM 319]
Length = 110
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F + L LT+I F V + F + IVL A+ Q+I L +F+HM+ K
Sbjct: 26 MKMQVISFGMMLFLTLIAFFAVYQEF--SGWYIMPVIVLLAVVQVIFQLYYFMHMNHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ + + ++ + FV +W
Sbjct: 84 TIPAFFLYSGVLVALLTILAFVTIIW 109
>gi|251799267|ref|YP_003013998.1| cytochrome C oxidase subunit IV [Paenibacillus sp. JDR-2]
gi|247546893|gb|ACT03912.1| cytochrome C oxidase subunit IV [Paenibacillus sp. JDR-2]
Length = 105
Score = 54.8 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
K+ +V FI S++LT+I F V G + + + + ++ CAI Q+ V + F++HM +
Sbjct: 19 GPKKHIVAFIFSILLTLIAFAAVAGGEI-NTDFIYIILIGCAILQVFVQMAFWMHMKDRG 77
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMW 100
I + ++ + W
Sbjct: 78 HTFAIIGILFGVFVVFTCVIMAEYW 102
>gi|294498141|ref|YP_003561841.1| cytochrome c oxidase subunit IV [Bacillus megaterium QM B1551]
gi|294348078|gb|ADE68407.1| cytochrome c oxidase, subunit IV [Bacillus megaterium QM B1551]
Length = 110
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K +V F + L LT+I F V + F + IVL A+ Q+I L +F+HM+ K
Sbjct: 26 MKMQVVSFAMMLFLTLIAFFAVYQEF--SGWYIMPVIVLLAVVQVIFQLYYFMHMNHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ + + ++ + FV +W
Sbjct: 84 TIPAFFLYSGVLVALLTILAFVTIIW 109
>gi|15615175|ref|NP_243478.1| cytochrome caa3 oxidase (subunit IV) [Bacillus halodurans C-125]
gi|10175233|dbj|BAB06331.1| cytochrome caa3 oxidase (subunit IV) [Bacillus halodurans C-125]
Length = 114
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ + F L + LTII F V + ++L A+ Q + L+FF+HM K
Sbjct: 26 IRRQFIVFALMIFLTIIAFLTVAADVV-PRTFAIPFVLLLALIQFTLQLLFFMHMKDKDH 84
Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99
++ + + V +
Sbjct: 85 GWANVFMITGIFVTVPTIAALML 107
>gi|312111801|ref|YP_003990117.1| cytochrome C oxidase subunit IV [Geobacillus sp. Y4.1MC1]
gi|311216902|gb|ADP75506.1| cytochrome c oxidase, subunit IV [Geobacillus sp. Y4.1MC1]
Length = 110
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++ F L ++LT+I F V F I+L AI Q++ L +F+HMS K
Sbjct: 25 MKHQVISFTLMILLTLISFFAVGCDKFSHW-FSVPFILLLAIVQVMFQLYYFMHMSHKGH 83
Query: 77 DGWSIM--AMIFTIIMVAICFVGSMW 100
+ ++ + +F + F +W
Sbjct: 84 EIPAMFMYSGMFVTFLTVWAFATIVW 109
>gi|23098895|ref|NP_692361.1| cytochrome c oxidase subunit IV [Oceanobacillus iheyensis HTE831]
gi|22777122|dbj|BAC13396.1| cytochrome c oxidase subunit IV (aa3 type) [Oceanobacillus
iheyensis HTE831]
Length = 106
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K+ +V F L + T+I F VM DK + +++ A+ QI +F+HM K
Sbjct: 22 MKKQIVTFALMIFFTLIAFFAVMLEI--DKMFVIPLLLILAVVQIAFQFFYFMHMKDKGH 79
Query: 77 DGWSIMA---MIFTIIMVAICFVGSMW 100
+ S + + T++++ V + W
Sbjct: 80 EVPSQIIYGGIFVTMLVILTFTVITWW 106
>gi|218288765|ref|ZP_03493028.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius
LAA1]
gi|218241123|gb|EED08299.1| cytochrome C oxidase subunit IV [Alicyclobacillus acidocaldarius
LAA1]
Length = 106
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
Q + G++LSL+LT I F +V ++ L + L A+ ++V L F+H++
Sbjct: 17 QYVTGYVLSLVLTAIAFVLVAFHVLPVPLLLVLLMALAALQ-VLVQLFLFMHVTEGDGSR 75
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
+AM + +GS+W+M
Sbjct: 76 VKGLAMGLGLFFTLAIALGSIWIM 99
>gi|255025410|ref|ZP_05297396.1| hypothetical protein LmonocytFSL_02104 [Listeria monocytogenes
FSL J2-003]
Length = 77
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS++LT++ + + N+ + I + A Q
Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 IIVHLVFFLHMSTKVEDG 78
+ L+ F+HM+ +
Sbjct: 60 AALQLLMFMHMTEGRDGK 77
>gi|167461104|ref|ZP_02326193.1| hypothetical protein Plarl_00788 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 104
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 12 HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71
H + + ++ +I+SL+LT++ F V+ G DK + L ++L + Q+I LV+++HM
Sbjct: 14 HKHEGPRNHIISYIISLLLTMLAFAAVLYGGL-DKTFLYLFLLLLGVVQVIFQLVYWMHM 72
Query: 72 STKVEDGWSIMAMIFTIIMVAICFVGSM 99
K I+++IF ++++ ++
Sbjct: 73 KEKGHVLP-IISLIFGVVVMLTAVAAAV 99
>gi|196249840|ref|ZP_03148536.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp.
G11MC16]
gi|196210716|gb|EDY05479.1| cytochrome aa3 quinol oxidase, subunit IV [Geobacillus sp.
G11MC16]
Length = 99
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
N H + L+GF+LSL+LT + + K + + IVL A+ Q + L
Sbjct: 2 GTNGHHESFPWKHLIGFVLSLLLTFAALWVALSSGLPLKAV-IVVIVLFAMIQASLQLFM 60
Query: 68 FLHMSTKVEDGWSIMAMIFTIIMV 91
F+H++ M+++ +
Sbjct: 61 FMHVAESDSGKVQTFNMVYSFFIA 84
>gi|299535601|ref|ZP_07048922.1| cytochrome aa3 quinol oxidase, subunit IV [Lysinibacillus
fusiformis ZC1]
gi|298728801|gb|EFI69355.1| cytochrome aa3 quinol oxidase, subunit IV [Lysinibacillus
fusiformis ZC1]
Length = 94
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
KQ ++GF SL+LTI+ +V F + N+ +++ A+AQ V LV F+H+ +
Sbjct: 7 KQHVMGFGFSLLLTIVALAVV--KFDMSLNMAFGILLVTALAQATVQLVLFMHIGESEDK 64
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVM 102
+++++ + + +G+++ M
Sbjct: 65 KTLYTTILYSVFVGVVTIIGTLFAM 89
>gi|239636439|ref|ZP_04677441.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus warneri
L37603]
gi|239597794|gb|EEQ80289.1| cytochrome aa3 quinol oxidase, subunit IV [Staphylococcus warneri
L37603]
Length = 96
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
T + VGFI S++LT++ + + I A Q + L+ F+H++
Sbjct: 3 TIVKHTVGFIASIVLTLLAVFVTLYTSMT-FQAKVTIIFGFAFIQAALQLLMFMHLTEGK 61
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ + +IF II+ I +G+ WVM +++
Sbjct: 62 DGRVQLFKVIFAIIITLIIVIGTYWVMQGGHSH 94
>gi|322151|pir||F45335 cytochrome-c oxidase (EC 1.9.3.1) chain IVb - Bacillus firmus
gi|142789|gb|AAA22367.1| cytochrome oxidase subunit IV [Bacillus firmus]
Length = 114
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ +V F L + LT++ F V ++ I + A+ Q + L FF+HM K
Sbjct: 26 IRKQIVAFALMIFLTLMSFMAVATDVI-PRSFAIPFIFILAVIQFALQLFFFMHMKDKDH 84
Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99
+ + I V +
Sbjct: 85 GWANAFMISGIFITVPTIAALML 107
>gi|288553206|ref|YP_003425141.1| cytochrome caa3 subunit IV [Bacillus pseudofirmus OF4]
gi|298286795|sp|Q04452|COX4_BACPE RecName: Full=Cytochrome c oxidase subunit 4B; AltName:
Full=Cytochrome aa3 subunit 4B; AltName: Full=Cytochrome
c oxidase polypeptide IVB
gi|288544366|gb|ADC48249.1| cytochrome caa3 subunit IV [Bacillus pseudofirmus OF4]
Length = 114
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ +V F L + LT++ F V ++ I + A+ Q + L FF+HM K
Sbjct: 26 IRKQIVVFALMIFLTLMSFMAVATDVI-PRSFAIPFIFILAVIQFALQLFFFMHMKDKDH 84
Query: 77 DGWSIMAMIFTIIMVAICFVGSM 99
+ + I V +
Sbjct: 85 GWANAFMISGIFITVPTIAALML 107
>gi|304405376|ref|ZP_07387035.1| cytochrome C oxidase subunit IV [Paenibacillus curdlanolyticus YK9]
gi|304345415|gb|EFM11250.1| cytochrome C oxidase subunit IV [Paenibacillus curdlanolyticus YK9]
Length = 106
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 12 HSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71
H + ++ +V +I SL+LT+I F VM G + + + +++ A Q+ V + F++HM
Sbjct: 16 HKHEGPQKHIVAYIFSLLLTLIAFAAVMAGEV-NTSFIIFILLMMAGLQVFVQMGFWMHM 74
Query: 72 STKVEDGWSIMAMIFTIIMVAICFVGSMW 100
+ I + +++ + + W
Sbjct: 75 KDRGHLYPIIGILTGVVVVFTMVIMAEYW 103
>gi|229918525|ref|YP_002887171.1| cytochrome C oxidase subunit IV [Exiguobacterium sp. AT1b]
gi|229469954|gb|ACQ71726.1| cytochrome C oxidase subunit IV [Exiguobacterium sp. AT1b]
Length = 104
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 20 CLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGW 79
L+ F + ++LT + FG V I + A+ Q+ + L F+HM+ + W
Sbjct: 23 QLISFAMMILLTFVAFGAVYAELMPVWAAGGFLI-ILAVIQVFLQLYIFMHMNNRGN-TW 80
Query: 80 SIMAMIFTIIMVAICFV 96
+ M I + I
Sbjct: 81 IVGMMWLGIFVAIITVA 97
>gi|323488487|ref|ZP_08093732.1| cytochrome caa3 oxidase (subunit IV) [Planococcus donghaensis
MPA1U2]
gi|323397855|gb|EGA90656.1| cytochrome caa3 oxidase (subunit IV) [Planococcus donghaensis
MPA1U2]
Length = 110
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ L F + + LT+I F +V GF ++ I+L A Q+++ L +F+HMS K
Sbjct: 26 MRGHLATFAIMIFLTLIAFTMVAAGF--SVYLIVPIILLLAGIQVVLQLYYFMHMSGKGH 83
Query: 77 DGWSIMAM--IFTIIMVAICFVGSMW 100
+ +F + + FV +W
Sbjct: 84 GMIAFFMFSGMFVAFITVLTFVTIIW 109
>gi|289807956|ref|ZP_06538585.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 41
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 31/37 (83%)
Query: 74 KVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
K ++GW++ A IFT++++AI VGS+W+M++LN NMM
Sbjct: 3 KSDEGWNMTAFIFTVLIIAILVVGSIWIMWNLNYNMM 39
>gi|297583922|ref|YP_003699702.1| cytochrome C oxidase subunit IV [Bacillus selenitireducens MLS10]
gi|297142379|gb|ADH99136.1| cytochrome C oxidase subunit IV [Bacillus selenitireducens MLS10]
Length = 115
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
K +V + L + +T + F + I+L A Q+I L F+HM K
Sbjct: 28 KTQIVSYFLMIAITSMAFISIATDAIPS-GFAIPFILLLAGIQVIFQLYVFMHMGEKKTS 86
Query: 78 GWSIMAMIFTIIMVAICFVGSM 99
+IM I++ +++A VG++
Sbjct: 87 WVNIM--IWSGMLIAALTVGAL 106
>gi|327441187|dbj|BAK17552.1| heme/copper-type cytochrome/quinol oxidase, subunit 4 [Solibacillus
silvestris StLB046]
Length = 114
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLH 70
H+ ++ +V F + + LT I F V+ F + I+L A Q+++ L F+H
Sbjct: 20 EHAKAHMRKQVVNFAIMIFLTFIAFAAVLADFAP--TFIIPIILLLAGVQVVLQLYAFMH 77
Query: 71 MSTKVEDG--------WSIMAMIFTIIMVAICFV 96
+ + WS + FT + +
Sbjct: 78 LEDRTTHMVGVIEFFIWSAAFIAFTFFLAFTTII 111
>gi|255028385|ref|ZP_05300336.1| hypothetical protein LmonL_02601 [Listeria monocytogenes LO28]
Length = 71
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 46 KNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
N+ + I + A Q + L+ F+HM+ + I ++F + + +GS WVM
Sbjct: 6 TNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIG 65
Query: 106 NNN 108
+ N
Sbjct: 66 HMN 68
>gi|289811051|ref|ZP_06541680.1| cytochrome o ubiquinol oxidase subunit IV [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 40
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 15 GTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIV 54
G+ K + GFILS+ILT+IPF +VM G I+ +
Sbjct: 1 GSVKTYMTGFILSVILTVIPFWMVMTGAASPAVILGSILA 40
>gi|319654028|ref|ZP_08008120.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp.
2_A_57_CT2]
gi|317394221|gb|EFV74967.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp.
2_A_57_CT2]
Length = 94
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ ++GF+ S++LT+I + + + +++ A Q V LV F+H +
Sbjct: 8 KQVLGFVFSIMLTVIALSV--YFLDMSFELAMTILLITAFIQAAVQLVVFMHAGESKDKK 65
Query: 79 WSIMAMIFTIIMVAICFVGSM 99
+ + + + G++
Sbjct: 66 SIYTTLYYGFFIALVTVFGTL 86
>gi|313625762|gb|EFR95395.1| quinol oxidase subunit 4 [Listeria innocua FSL J1-023]
Length = 62
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 50 CLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNN 108
+ I + A Q + L+ F+HM+ + I ++F + + +GS WVM + N
Sbjct: 1 VVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMN 59
>gi|332969497|gb|EGK08516.1| prokaryotic cytochrome C oxidase subunit IV superfamily protein
[Desmospora sp. 8437]
Length = 105
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
++ + ++ F+ L+ T I F +V L +N++ I+L A Q+++ L F+H+ K
Sbjct: 21 SEGRYMLSFVWMLLFTGISFVLV-GMNLLPENLIIPAILLLAALQVLMQLFTFMHLDFKW 79
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWV 101
++ I+ WV
Sbjct: 80 YLTATVFMGSGCIVAATAIIAMLYWV 105
>gi|23099711|ref|NP_693177.1| cytochrome aa3 quinol oxidase subunit IV [Oceanobacillus iheyensis
HTE831]
gi|22777941|dbj|BAC14212.1| cytochrome aa3 quinol oxidase subunit IV [Oceanobacillus iheyensis
HTE831]
Length = 94
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ + GFI SL+LT+I + + + +++ A Q V L+ F+H + G
Sbjct: 8 KQVNGFIFSLLLTVIALSV--YFLDMSFAMGLTILIVTAFIQAGVQLIVFMHAGESEDKG 65
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
++ + ++ + GS+ M
Sbjct: 66 TIYTSIYYGALIALLTVFGSLLAM 89
>gi|332974251|gb|EGK11183.1| cytochrome c oxidase subunit 4B [Desmospora sp. 8437]
Length = 101
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ + F++ L+LT + F V + ++ + I+ A Q+++ F+H+ K E
Sbjct: 20 KYVASFVVMLLLTGLSFAAVAMN-IVPQSWIIPLILALATVQVLMQFFSFMHLHLKKEAV 78
Query: 79 WSIMAMIFTIIMVAIC 94
I++ +++ + + +
Sbjct: 79 --IVSFMYSGVFLGLI 92
>gi|261406336|ref|YP_003242577.1| cytochrome aa3 quinol oxidase subunit IV [Paenibacillus sp.
Y412MC10]
gi|329922313|ref|ZP_08277990.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus sp. HGF5]
gi|261282799|gb|ACX64770.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus sp.
Y412MC10]
gi|328942176|gb|EGG38447.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus sp. HGF5]
Length = 95
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ + G+I SL+L+ + +++ + +++ AI Q V L+ F+H+ +
Sbjct: 9 KHVAGYISSLVLSAVALVVLLD---MPAASKVAVLLVTAILQAAVQLMLFMHVGESEDKK 65
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
+ + F + + + G++++
Sbjct: 66 SVYINIAFALFVGLVTIFGTLFIF 89
>gi|253574493|ref|ZP_04851834.1| cytochrome c oxidase subunit 4 [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846198|gb|EES74205.1| cytochrome c oxidase subunit 4 [Paenibacillus sp. oral taxon 786
str. D14]
Length = 94
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
Q ++G++ SLIL+ + +V + + +++CA Q+ V L F+H+ G
Sbjct: 8 QHVMGYVFSLILSAVALSVVFWD--MSFAVGMTILLVCAAVQMSVQLFMFMHIGENRSKG 65
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
+++ + + + G++ M
Sbjct: 66 ALYANLVYALFVGLVTVFGTLLTM 89
>gi|299534637|ref|ZP_07047969.1| cytochrome caa3 oxidase subunit IV [Lysinibacillus fusiformis ZC1]
gi|298730010|gb|EFI70553.1| cytochrome caa3 oxidase subunit IV [Lysinibacillus fusiformis ZC1]
Length = 114
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ ++ F + + T I F +V F K ++ ++L A Q+++ L F+H+ K
Sbjct: 27 MRKQVINFAIMIFFTFIAFAVVAADF--SKYLIMPFVLLLAGVQVVLQLYSFMHLEDKKT 84
Query: 77 D--------GWSIMAMIFTIIMVAICFV 96
W + + FT + + +
Sbjct: 85 HFGGVIGFFMWMGILIAFTFFLAFLTII 112
>gi|315646712|ref|ZP_07899828.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus vortex
V453]
gi|315277918|gb|EFU41241.1| cytochrome aa3 quinol oxidase, subunit IV [Paenibacillus vortex
V453]
Length = 95
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ + G+I SL+L+ + +++ + +++ AI Q V L+ F+H+ +
Sbjct: 9 KHVAGYISSLVLSAVALVVLLD---MPTASKFAILLVTAILQAAVQLMLFMHVGESDDKK 65
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
+ + F + + + G++++
Sbjct: 66 SVYINIAFALFVGLVTIFGTLFIF 89
>gi|89099557|ref|ZP_01172432.1| cytochrome c oxidase, subunit IV [Bacillus sp. NRRL B-14911]
gi|89085710|gb|EAR64836.1| cytochrome c oxidase, subunit IV [Bacillus sp. NRRL B-14911]
Length = 84
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
++ F L + LT++ F V F + I++ A+ Q+I L +F+HMS K +
Sbjct: 1 MQVITFALMIFLTLVAFVAVGYEEFSAW-FIVPFILILAVVQVIFQLYYFMHMSHKGHEA 59
Query: 79 WSIMAMIFTIIMVAICFV 96
++ ++
Sbjct: 60 PALFLYSGLLVGAITVLA 77
>gi|253574579|ref|ZP_04851920.1| cytochrome C oxidase subunit IV [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846284|gb|EES74291.1| cytochrome C oxidase subunit IV [Paenibacillus sp. oral taxon 786
str. D14]
Length = 106
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
+ + ++ ++ FI S++LT+I + ++ + +++ A+ Q++V L +++
Sbjct: 14 HRQRHEGPEKHIIAFIFSIVLTLI-AFAAVAAGGVNTAFTVILLLVMAVLQVLVQLGYWM 72
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103
HM K + + W+ +
Sbjct: 73 HMKDKGHLIPILFMAGGFFVAFTAIIAALYWMWW 106
>gi|126649760|ref|ZP_01721996.1| hypothetical protein BB14905_16220 [Bacillus sp. B14905]
gi|126593479|gb|EAZ87424.1| hypothetical protein BB14905_16220 [Bacillus sp. B14905]
Length = 114
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ ++ F + + T I F +V F K ++ ++L A Q+++ L F+H+ K
Sbjct: 27 MRKQVLNFAIMIFFTFIAFAVVAADF--SKYLIMPFVLLLAGVQVVLQLYSFMHLEDKKT 84
Query: 77 D--------GWSIMAMIFTIIMVAICFV 96
W + + FT + + +
Sbjct: 85 HYGGVIGFFMWMGILIAFTFFLAFLTII 112
>gi|169826978|ref|YP_001697136.1| cytochrome caa3 oxidase (subunit IV) [Lysinibacillus sphaericus
C3-41]
gi|168991466|gb|ACA39006.1| cytochrome caa3 oxidase (subunit IV) [Lysinibacillus sphaericus
C3-41]
Length = 114
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
++ ++ F + + T I F +V F K ++ ++L A Q+++ L F+H+ K
Sbjct: 27 MRKQVLNFAIMIFFTFIAFAVVAADF--SKYLIMPFVLLLAGVQVVLQLYSFMHLEDKKT 84
Query: 77 D--------GWSIMAMIFTIIMVAICFV 96
W + + FT + + +
Sbjct: 85 HFGGVIGFFMWMGILIAFTFFLAFLTII 112
>gi|126651762|ref|ZP_01723964.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905]
gi|126591440|gb|EAZ85547.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905]
Length = 94
Score = 42.4 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+ ++GF LS+ILTII V F + I +++ A Q + LV F+H +
Sbjct: 8 KQVMGFALSIILTIIA-ACVYF-FQISMPITMTILLVTAFIQAGLQLVVFMHAGETNDKP 65
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
+ + +++ + G++ M
Sbjct: 66 AIYTNIYYGLVIALVTIFGTLLCM 89
>gi|212224619|ref|YP_002307855.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
NA1]
gi|212009576|gb|ACJ16958.1| hypothetical membrane protein, conserved [Thermococcus onnurineus
NA1]
Length = 345
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K L+GF++++I +I GIV G ++ ++ + + L+FF ++ E
Sbjct: 4 LKAYLIGFLIAVI--VIAAGIVWYG---GWKLLLQVVLALGFLSVTLMLLFFTALTFYAE 58
Query: 77 D-GWSIMAMIFTII 89
+ + IFT+I
Sbjct: 59 SWKYGGILAIFTVI 72
>gi|295698392|ref|YP_003603047.1| hypothetical protein RIEPE_0169 [Candidatus Riesia pediculicola
USDA]
gi|291157309|gb|ADD79754.1| hypothetical protein RIEPE_0169 [Candidatus Riesia pediculicola
USDA]
Length = 70
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 51 LTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNNNMM 110
+ I + +IA+I +H + FL++ E + I ++F II+ I GS+W+M+HL NM
Sbjct: 1 MIIFISSIARISIHFLVFLNLKLFKEKIYKISFLMFFIIISFILSSGSLWIMHHLRTNMS 60
Query: 111 SMEGM 115
+
Sbjct: 61 NQHET 65
>gi|330950892|gb|EGH51152.1| cytochrome o ubiquinol oxidase subunit IV [Pseudomonas syringae
Cit 7]
Length = 31
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 4 DNIHNMNMHSYGTKKQCLVGFILSLILT 31
++ H+ +S+G+ K ++GF+LS+ILT
Sbjct: 3 NSHHSAEDNSHGSVKSYVIGFVLSIILT 30
>gi|327439286|dbj|BAK15651.1| heme/copper-type cytochrome/quinol oxidase, subunit 4 [Solibacillus
silvestris StLB046]
Length = 93
Score = 41.7 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
++GF+ SLILT+I +++ + + +++ A Q + + F+H +
Sbjct: 8 GQIMGFVFSLILTVIA--MLVYFTDMSFTTGMVILLVTAFIQAGLQFIVFMHAGETNDKW 65
Query: 79 WSIMAMIFTIIMVAICFVGSMWVM 102
+++ I +V + +GS+ ++
Sbjct: 66 AIYSNIVYGIGLVVLTVLGSLLIL 89
>gi|89099674|ref|ZP_01172548.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. NRRL
B-14911]
gi|89085617|gb|EAR64744.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. NRRL
B-14911]
Length = 84
Score = 41.3 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 23 GFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIM 82
GF+ SLILT + +++ F + + +V+ A Q + LV F+H + G
Sbjct: 2 GFVFSLILTAVA--LMVYFFDMSYAVGLTILVITAFIQAALQLVVFMHAGESDDKGTIFT 59
Query: 83 AMIFTIIMVAICFVGSMWVM 102
+ ++I + + G++ M
Sbjct: 60 NIYYSIFIALVTVFGTLLTM 79
>gi|313635469|gb|EFS01713.1| quinol oxidase subunit 4 [Listeria seeligeri FSL N1-067]
Length = 60
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MAQNNKSNTAHAEGGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
Query: 61 I 61
Sbjct: 60 A 60
>gi|315290024|ref|ZP_07872199.1| quinol oxidase subunit 4 [Listeria ivanovii FSL F6-596]
gi|313630856|gb|EFR98565.1| quinol oxidase subunit 4 [Listeria ivanovii FSL F6-596]
Length = 59
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQ 60
M +N N G + +VGF LS+ILT++ + + N+ + I + A Q
Sbjct: 1 MAQNNKSNAAHAEGGIPWKHIVGFALSIILTLLAVWVALYSTLT-TNVKVVIIFIFAFIQ 59
>gi|126653832|ref|ZP_01725695.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905]
gi|126589669|gb|EAZ83806.1| cytochrome aa3 quinol oxidase subunit IV [Bacillus sp. B14905]
Length = 93
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
KQ ++GF SL+LT++ + + F + + +++ A+AQ V LV F+H+ +
Sbjct: 7 KQHVMGFGFSLLLTLV--ALAVVTFDMSYKVAFAILLVTALAQATVQLVLFMHIGESEDK 64
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVM 102
+++++ + + +G+++ M
Sbjct: 65 KTLYTTILYSVFVGVVTIIGTLFAM 89
>gi|56964155|ref|YP_175886.1| cytochrome caa3 oxidase subunit IV CoxD [Bacillus clausii KSM-K16]
gi|56910398|dbj|BAD64925.1| cytochrome caa3 oxidase subunit IV CoxD [Bacillus clausii KSM-K16]
Length = 115
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
+ +V F+L L LT++ F V N I++ A+ Q+++ L+FF+HM K
Sbjct: 27 IRNQIVVFVLMLFLTVLAFAAVGADII-PTNFAVPFILILAVVQLLLQLLFFMHMKDKDH 85
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWV 101
++ + + V + +
Sbjct: 86 TWATVFIITGIFVTVPTIVSLMLLI 110
>gi|169829428|ref|YP_001699586.1| cytochrome aa3 quinol oxidase subunit IV [Lysinibacillus sphaericus
C3-41]
gi|168993916|gb|ACA41456.1| cytochrome aa3 quinol oxidase subunit IV [Lysinibacillus sphaericus
C3-41]
Length = 93
Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 18 KQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVED 77
KQ ++GF SL+LT++ + + F + + +++ A+AQ V LV F+H+ +
Sbjct: 7 KQHVMGFGFSLLLTLV--ALAVVTFDMSYKMAFAILLVTALAQATVQLVLFMHIGESEDK 64
Query: 78 GWSIMAMIFTIIMVAICFVGSMWVM 102
+++++ + + +G+++ M
Sbjct: 65 KTLYTTILYSVFVGVVTIIGTLFAM 89
>gi|283780695|ref|YP_003371450.1| caa(3)-type oxidase, subunit IV [Pirellula staleyi DSM 6068]
gi|283439148|gb|ADB17590.1| caa(3)-type oxidase, subunit IV [Pirellula staleyi DSM 6068]
Length = 173
Score = 37.1 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIV----MKGFFLDKNIMCLTIVLC 56
M + + + + H G + + F+ +LT I F + ++ + + V C
Sbjct: 1 MGHASGSHTHTHVPGGVGKYVAVFVALCVLTAISFAVGNSQQLRENAPGVMMAMMMAVSC 60
Query: 57 AIAQIIVHLVFFLHMSTKVEDGW--SIMAMIFTIIMVAICF 95
A A +++ +FF+H+ + + +I A I + +V +
Sbjct: 61 AKASLVI--LFFMHLKYEANWKYVLTIPASIMSFFLVLMLI 99
>gi|149923342|ref|ZP_01911750.1| Caa(3)-type oxidase, subunit IV [Plesiocystis pacifica SIR-1]
gi|149815822|gb|EDM75344.1| Caa(3)-type oxidase, subunit IV [Plesiocystis pacifica SIR-1]
Length = 256
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 7 HNMNMHSYGT-KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H H + T Q FI L LTI+ + + G + + + +C + +++
Sbjct: 15 HPHEDHHHVTPVWQFTAVFIALLFLTILTYAVSFAGLGPASLPVAMAVAICKGSLVVL-- 72
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSM 99
FF+H++ + A +F + ++ I +
Sbjct: 73 -FFMHLAYEDR----FYAFVFVVSLIFIAIFFTF 101
>gi|218671103|ref|ZP_03520774.1| hypothetical protein RetlG_05283 [Rhizobium etli GR56]
Length = 41
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 81 IMAMIFTIIMVAICFVGSMWVMYHLNNNMMSM 112
+MA+IFT+I+VAI GS+WVM+HLN NMM M
Sbjct: 1 MMALIFTLIIVAIALSGSLWVMHHLNTNMMPM 32
>gi|297625015|ref|YP_003706449.1| cytochrome c class I [Truepera radiovictrix DSM 17093]
gi|297166195|gb|ADI15906.1| cytochrome c class I [Truepera radiovictrix DSM 17093]
Length = 464
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 3 YDNIHNMNMH-------SYGT-KKQCL-VGFILSLILTIIPFGIVMKG----FFLDKNIM 49
+ H + H ++G+ + V +L++I T I F +V ++ + +
Sbjct: 2 HKPEHETSPHKPEGHPEAHGSSVGFYIFVAVVLAII-TYIEFALVEHQETWFAWMSRPWL 60
Query: 50 CLTIVLCAIAQIIVHLVFFLHMST 73
+V+ + + ++ ++FF+H+
Sbjct: 61 FFWLVVLSAIKFLMVVMFFMHLKQ 84
>gi|315645045|ref|ZP_07898171.1| cytochrome C oxidase subunit IV [Paenibacillus vortex V453]
gi|315279466|gb|EFU42771.1| cytochrome C oxidase subunit IV [Paenibacillus vortex V453]
Length = 109
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
+ H ++ +V FI S++LT I + ++ + +++ A+ Q+ V + +++
Sbjct: 17 HRHRVEGPEKHIVVFIFSIVLTAI-AFAAVAAGGINTAFTIIILLVMAVLQVFVQMGYWM 75
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103
H+ K + + + + WV +
Sbjct: 76 HLKDKGHLMPILFMIGGFFVASTCIVMALFWVWW 109
>gi|261404605|ref|YP_003240846.1| cytochrome C oxidase subunit IV [Paenibacillus sp. Y412MC10]
gi|261281068|gb|ACX63039.1| cytochrome C oxidase subunit IV [Paenibacillus sp. Y412MC10]
Length = 107
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
+ H ++ +V FI S++LT I + ++ + +++ A+ Q+ V + +++
Sbjct: 15 HRHRVEGPEKHIVVFIFSIVLTAI-AFAAVAAGGINTAFTIILLLVMAVLQVFVQMGYWM 73
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103
H+ K + + + + WV +
Sbjct: 74 HLKDKGHLMPILFMIGGFFVASTCIVMALFWVWW 107
>gi|240102383|ref|YP_002958692.1| TRP-repeat-containing protein [Thermococcus gammatolerans EJ3]
gi|239909937|gb|ACS32828.1| TRP-repeat-containing protein [Thermococcus gammatolerans EJ3]
Length = 339
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 17 KKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVE 76
K ++GF+++++ I IV + + I+ + L+FF ++ E
Sbjct: 4 LKAYIIGFLIAVL--AIAGFIVYE---WGWVKLLQLILAVGFVGFTLALLFFTALTLYAE 58
Query: 77 DGWSIMAMIFTIIMVAICFVGSMWVM 102
W A++ ++ AI GS V+
Sbjct: 59 S-WKYGAIL--AVLTAIAGYGSYLVL 81
>gi|298247274|ref|ZP_06971079.1| integral membrane sensor signal transduction histidine kinase
[Ktedonobacter racemifer DSM 44963]
gi|297549933|gb|EFH83799.1| integral membrane sensor signal transduction histidine kinase
[Ktedonobacter racemifer DSM 44963]
Length = 391
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 7 HNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMK 40
H H + L+G+ L+++ T I F I M
Sbjct: 10 HRHADHRHSWWHSPLLGYPLAVLFTAIAFLIPMS 43
>gi|299137318|ref|ZP_07030500.1| acriflavin resistance protein [Acidobacterium sp. MP5ACTX8]
gi|298600723|gb|EFI56879.1| acriflavin resistance protein [Acidobacterium sp. MP5ACTX8]
Length = 1075
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 16 TKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKV 75
+ K +G ILS+IL F I+M F + I+L AI I ++ FL ++
Sbjct: 889 SFKSFAIGLILSIIL---VFLILMAQFAS---FVDPFIILLAIPPGISGVILFLLVTGTS 942
Query: 76 EDGWSIMAMIFTIIMVAICFVGSMWV 101
+IM+++ ++M I S+ +
Sbjct: 943 ---INIMSLMGVLMMTGIVVSDSILI 965
>gi|290985578|ref|XP_002675502.1| predicted protein [Naegleria gruberi]
gi|284089099|gb|EFC42758.1| predicted protein [Naegleria gruberi]
Length = 827
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 7 HNMNMHSYGTKKQC-LVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHL 65
H H + + ++ F LS+++T+ F ++ F+ I + +++ I++
Sbjct: 442 HYHCEHEHTFFRYFTVIYFQLSILITL--FLLIGFTFYFIGWISGVCLIVLL---IMISF 496
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHLNN 107
V F+ + D +F +M + +G+++++ LN
Sbjct: 497 VLFMRVDIDAADA------LFACLMTFMFLLGAIFILGSLNA 532
>gi|229137497|ref|ZP_04266107.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST26]
gi|228645944|gb|EEL02168.1| Quinol oxidase, subunit IV [Bacillus cereus BDRD-ST26]
Length = 49
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
A+AQ ++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 1 MAVAQALLQLIMFMHLKEG-EGRVQVLTMIYSFFVATATVGLTVWIFFSM 49
>gi|312196014|ref|YP_004016075.1| integral membrane export protein [Frankia sp. EuI1c]
gi|311227350|gb|ADP80205.1| putative integral membrane export protein [Frankia sp. EuI1c]
Length = 755
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
S G+ L+GF+ +LI+ I F V + + + I+ H
Sbjct: 180 GQSAGSGSSILIGFLAALIILAIVFRTVAATVLPLASAVVALVSGLGAIYILSH 233
>gi|332969686|gb|EGK08702.1| cytochrome-c oxidase subunit IV [Desmospora sp. 8437]
Length = 74
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 27 SLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIF 86
L++T I F V +F +I I++ A Q+I+ L F+H+ + + M
Sbjct: 1 MLLVTAIAFASVGSRYF-PASITLTVILVMAGIQLILQLTSFMHLDRRSQIPILFMTAGL 59
Query: 87 TIIMVAIC 94
++ +
Sbjct: 60 GFSLIIVV 67
>gi|329895173|ref|ZP_08270857.1| Fructokinase [gamma proteobacterium IMCC3088]
gi|328922487|gb|EGG29828.1| Fructokinase [gamma proteobacterium IMCC3088]
Length = 300
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 8 NMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVF 67
HS+ L F +L+LT P IV+ G + + + L A Q+ +L
Sbjct: 203 GSAHHSHDIIGYYLGSFAANLLLTYAPNYIVLGGGVSLTDGLLNRVRLSAFEQLGGYLGR 262
Query: 68 FLHMST 73
F H+
Sbjct: 263 FHHVDE 268
>gi|158315441|ref|YP_001507949.1| MMPL domain-containing protein [Frankia sp. EAN1pec]
gi|158110846|gb|ABW13043.1| MMPL domain protein [Frankia sp. EAN1pec]
Length = 781
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 20/54 (37%)
Query: 11 MHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVH 64
S G+ +GF +LI+ + F V + + + + I+ H
Sbjct: 180 GQSDGSGSSVFIGFAAALIILALVFRTVAATVLPLASAVAALVSGLGVIYILSH 233
>gi|229010128|ref|ZP_04167341.1| Quinol oxidase, subunit IV [Bacillus mycoides DSM 2048]
gi|228751125|gb|EEM00938.1| Quinol oxidase, subunit IV [Bacillus mycoides DSM 2048]
Length = 49
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
A+AQ ++ L+ F+H+ E ++ MI++ + ++W+ + +
Sbjct: 1 MAVAQALLQLIMFMHLKEG-EGRIQVLTMIYSFFVATATVGLTVWIFFSM 49
>gi|228913388|ref|ZP_04077021.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228919550|ref|ZP_04082914.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228932129|ref|ZP_04095020.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228944450|ref|ZP_04106823.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983899|ref|ZP_04144092.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|296501450|ref|YP_003663150.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus
thuringiensis BMB171]
gi|228775812|gb|EEM24185.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815352|gb|EEM61600.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228827557|gb|EEM73300.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228840193|gb|EEM85470.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846297|gb|EEM91316.1| Quinol oxidase, subunit IV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|296322502|gb|ADH05430.1| cytochrome aa3 quinol oxidase polypeptide IV [Bacillus
thuringiensis BMB171]
Length = 49
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 56 CAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMYHL 105
A+AQ ++ L+ F+H+ E I+ MI++ + ++W+ + +
Sbjct: 1 MAVAQALLQLIMFMHLKEG-EGRVQILTMIYSFFVATATVGLTVWIFFSM 49
>gi|229083934|ref|ZP_04216237.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-44]
gi|228699369|gb|EEL52051.1| Quinol oxidase, subunit IV [Bacillus cereus Rock3-44]
Length = 61
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 44 LDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103
+ + + I++ A+AQ ++ L+ F+H+ + E I+ MI++ + ++W+ +
Sbjct: 1 MPLSTILTAIIVMALAQGLLQLIMFMHL-REGEGTIQILTMIYSFFVAIATVGLTVWIFF 59
Query: 104 HL 105
+
Sbjct: 60 SM 61
>gi|92114512|ref|YP_574440.1| hypothetical protein Csal_2394 [Chromohalobacter salexigens DSM
3043]
gi|91797602|gb|ABE59741.1| conserved hypothetical protein [Chromohalobacter salexigens DSM
3043]
Length = 376
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 28 LILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFT 87
L T+ PF + + + + L ++ C + I+ L F W + +F
Sbjct: 98 LFFTL-PFFLATTVWASGQAVFTLLLIGCGLLAILDPLYF----GLAQRHRW--LYFMFH 150
Query: 88 IIMVAICFVGSMWVMYHL 105
+ V + + ++ +M HL
Sbjct: 151 ALCVFVVVLVTLPIMLHL 168
>gi|89894026|ref|YP_517513.1| hypothetical protein DSY1280 [Desulfitobacterium hafniense Y51]
gi|89333474|dbj|BAE83069.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 888
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVM--KGFFLDKNIMCLTIVLCAIAQIIV-----HL 65
++G+ + ++G +L LT++ F I + G+ L + I+ A V L
Sbjct: 747 AHGSGIRAIIGGVLIGALTLVAFYIGLREYGYTLGSTDIPADILTYARTMAFVVLAASQL 806
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
+ L M + +++ ++ AI + +M
Sbjct: 807 FYSLSMRHATKSIFAVGIFSNRYLIAAIIVGLLLQLM 843
>gi|219668410|ref|YP_002458845.1| ATPase P [Desulfitobacterium hafniense DCB-2]
gi|219538670|gb|ACL20409.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC
[Desulfitobacterium hafniense DCB-2]
Length = 882
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 13 SYGTKKQCLVGFILSLILTIIPFGIVM--KGFFLDKNIMCLTIVLCAIAQIIV-----HL 65
++G+ + ++G +L LT++ F I + G+ L + I+ A V L
Sbjct: 741 AHGSGIRAIIGGVLIGALTLVAFYIGLREYGYTLGSTDIPADILTYARTMAFVVLAASQL 800
Query: 66 VFFLHMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVM 102
+ L M + +++ ++ AI + +M
Sbjct: 801 FYSLSMRHATKSIFAVGIFSNRYLIAAIIVGLLLQLM 837
>gi|313625765|gb|EFR95397.1| quinol oxidase subunit 4 [Listeria innocua FSL J1-023]
Length = 55
Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 1 MKYDNIHNMNMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIV 54
M +N N G + +VGF LS+ILT++ + + + + +
Sbjct: 1 MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVAIYSTLTTNVKVVIIFI 54
>gi|78221313|ref|YP_383060.1| 2-acyl-glycerophospho-ethanolamine acyltransferase [Geobacter
metallireducens GS-15]
gi|78192568|gb|ABB30335.1| AMP-dependent synthetase and ligase [Geobacter metallireducens
GS-15]
Length = 1128
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Query: 25 ILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAM 84
I ++ LT+ F + M L + + + + IV L F+ + + ++A
Sbjct: 294 IGAVGLTVCSFVLAMMPASLWAVLAVVALFGVSAGLFIVPLQSFIQLRAPADRRGEVLAA 353
Query: 85 -IFTIIMVAICFVGSMWVMY 103
F + + G +WV+
Sbjct: 354 SSFLSWVGVLLASGLLWVLS 373
>gi|71902997|ref|YP_279800.1| permease [Streptococcus pyogenes MGAS6180]
gi|71802092|gb|AAX71445.1| permease [Streptococcus pyogenes MGAS6180]
Length = 235
Score = 34.4 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 27 SLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQI 61
S+ILT I FG+ + FL N+ + A Q+
Sbjct: 99 SVILTGIAFGMALFTPFLPSNVTVAALAFFASIQV 133
>gi|329923599|ref|ZP_08279043.1| prokaryotic cytochrome C oxidase subunit IV [Paenibacillus sp.
HGF5]
gi|328941152|gb|EGG37451.1| prokaryotic cytochrome C oxidase subunit IV [Paenibacillus sp.
HGF5]
Length = 95
Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 10 NMHSYGTKKQCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFL 69
+ H ++ +V FI S++LT I + ++ + +++ A+ Q+ V + +++
Sbjct: 3 HRHRVEGPEKHIVVFIFSIVLTAI-AFAAVAAGGINTAFTIILLLVMAVLQVFVQMGYWM 61
Query: 70 HMSTKVEDGWSIMAMIFTIIMVAICFVGSMWVMY 103
H+ K + + + + WV +
Sbjct: 62 HLKDKGHLMPILFMIGGFFVASTCIVMALFWVWW 95
>gi|138894230|ref|YP_001124683.1| hypothetical protein GTNG_0556 [Geobacillus thermodenitrificans
NG80-2]
gi|134265743|gb|ABO65938.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 409
Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 27 SLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIF 86
++IL I+ F I M G + ++ I+ + ++ FL + W + A+ F
Sbjct: 311 AMILVIVAFMIAMSGLNMPESA---FIIGASFIPFFTPMLMFLRVGLVSVPMWEV-ALSF 366
Query: 87 TIIMVAICF 95
+++ I
Sbjct: 367 ALLLATIAV 375
>gi|330808871|ref|YP_004353333.1| hypothetical protein PSEBR_a2078 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376979|gb|AEA68329.1| Conserved hypothetical protein; putative membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 378
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 10/83 (12%)
Query: 19 QCLVGFILSLILTIIP--FGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFF----LHMS 72
FI S++LTII F +V + I+ + I+VHL+++ L
Sbjct: 2 SYEFVFIRSIVLTIIIGLFLLVTGRAARKRA----CILAFWVFAIVVHLIWWRLPELKGG 57
Query: 73 TKVEDGWSIMAMIFTIIMVAICF 95
W + A + ++ +
Sbjct: 58 WSEAGRWLVSAWVGAVLTAVVLI 80
>gi|161503258|ref|YP_001570370.1| zinc transporter [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|189041682|sp|A9MQT3|ZNTB_SALAR RecName: Full=Zinc transport protein ZntB
gi|160864605|gb|ABX21228.1| hypothetical protein SARI_01326 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 327
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 26/65 (40%)
Query: 36 GIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDGWSIMAMIFTIIMVAICF 95
+VM+ + + + + + +F +++ GW +F I++V +
Sbjct: 256 ALVMQESLTRRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWRFGFSLFCILLVVLIA 315
Query: 96 VGSMW 100
++W
Sbjct: 316 GVTLW 320
>gi|294788821|ref|ZP_06754062.1| copper-exporting ATPase [Simonsiella muelleri ATCC 29453]
gi|294483303|gb|EFG30989.1| copper-exporting ATPase [Simonsiella muelleri ATCC 29453]
Length = 816
Score = 33.6 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAI 58
+ GF LSLIL IP +V F + +T+ L I
Sbjct: 428 KYASGFTLSLILLAIPTFLVWWYFADASKALWVTVSLLVI 467
>gi|149185968|ref|ZP_01864283.1| membrane-bound proton-translocating pyrophosphatase [Erythrobacter
sp. SD-21]
gi|148830529|gb|EDL48965.1| membrane-bound proton-translocating pyrophosphatase [Erythrobacter
sp. SD-21]
Length = 708
Score = 33.6 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 19 QCLVGFILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHMSTKVEDG 78
+V +++LT + FG + + + L I I I+ +F+ + + G
Sbjct: 225 TYVVTVGATMVLTALLFGDALGDLLMPMMALPLLIGGACIVTSIIG-TYFVKL---SKGG 280
Query: 79 WSIMAMIFTIIMV-AICFVGSMWVMYH 104
++M ++ +V AI + +W++ +
Sbjct: 281 TNVMGAMYKGFLVSAILAIPLIWIVMN 307
>gi|168011085|ref|XP_001758234.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690690|gb|EDQ77056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 16 TKKQCLVGF----ILSLILTIIPFGIVMKGFFLDKNIMCLTIVLCAIAQIIVHLVFFLHM 71
+ K+ + GF +L L I F V GF I+ + + +++ ++
Sbjct: 499 SMKKYVFGFGSIQVLVTALVIGAFAHVACGFSGPAAIVIGNGLALSSTAVVLQVLQERGE 558
Query: 72 STKVEDGWSIMAMIF 86
+T + ++F
Sbjct: 559 NTSRHGRATFSVLLF 573
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.320 0.165 0.584
Lambda K H
0.267 0.0503 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,781,860,842
Number of Sequences: 14124377
Number of extensions: 93554300
Number of successful extensions: 969087
Number of sequences better than 10.0: 2647
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 1933
Number of HSP's that attempted gapping in prelim test: 965694
Number of HSP's gapped (non-prelim): 4002
length of query: 119
length of database: 4,842,793,630
effective HSP length: 86
effective length of query: 33
effective length of database: 3,628,097,208
effective search space: 119727207864
effective search space used: 119727207864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.6 bits)
S2: 76 (33.6 bits)