HHsearch alignment for GI: 254780472 and conserved domain: MTH00052
>MTH00052 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=324.63 Aligned_cols=184 Identities=22% Similarity=0.446 Sum_probs=162.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6572025660268889999999999999999999427888-----8886-600002-40357899999999999999999
Q gi|254780472|r 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTIVLLLSSLSCSFAML 93 (210)
Q Consensus 21 ~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~iLl~SS~~~~~a~~ 93 (210)
T Consensus 71 ~ht~~v~~gl~~Gm~lFI~SEvmfF~sfFWa~f~~~l~p~~e~g~~WPP~gi~~~~p~~iPllNT~iLlsSg~t~t~Ah~ 150 (262)
T MTH00052 71 HHTLIVKQGLKYGMILFIVSEVCLFFSFFWAFFHSSLAPTIEIGAVWPPRGVDPLNPFSVPLLNTAVLLSSGATVTWAHH 150 (262)
T ss_pred CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
T ss_conf 79677750524674999999999999999987621358861024658999867898110268999999800011699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99633336887765589999999998899998755431110014786016799998997999999999999999999707
Q gi|254780472|r 94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173 (210)
Q Consensus 94 a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~ 173 (210)
T Consensus 151 al~~~-~~~~~~~~l~~Ti~LG~~F~~~Q~~EY~~---~~ft~~d~vygS~Ff~~TGfHG~HVi~G~~~l~~~~~r~~~~ 226 (262)
T MTH00052 151 GIISG-KRKEAIRGLALTVALGLLFTGLQAMEYYE---APFTISDSVYGSTFFVTTGAHGGHVLIGSTFLLVCLYRLINY 226 (262)
T ss_pred HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99966-78889999999999999999999999996---566553126887999999999999999999999999999727
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99830426799998999999999999999999982
Q gi|254780472|r 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 174 ~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 227 ~~~~~~h~~~e~a~~YWHFVDvVWlflf~~vYwWG 261 (262)
T MTH00052 227 QFTRHHHFGFEAAAWYWHFVDVVWLFLFIFMYWWG 261 (262)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 89976107999999998874766723552422747