HHsearch alignment for GI: 254780472 and conserved domain: MTH00075
>MTH00075 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=328.54 Aligned_cols=191 Identities=21% Similarity=0.442 Sum_probs=165.3
Q ss_pred EEEECCCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHH
Q ss_conf 465307765720-------25660268889999999999999999999427888-----8886-600002-403578999
Q gi|254780472|r 14 LFYVKDKKESCV-------DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTI 79 (210)
Q Consensus 14 ~~~~~~~~~~~~-------~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~ 79 (210)
T Consensus 56 ~W~rdvi~Es~~~G~ht~~v~~g~~~Gm~lFI~SEvmfF~sfFwa~fh~~l~p~~e~g~~WPP~gi~~~~p~~lPllNT~ 135 (261)
T MTH00075 56 QWWRDIVREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYNSSLAPTPELGECWPPTGITPLDPFEVPLLNTA 135 (261)
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99998731135688884999974689779999999999999999999997267634376289998625773337098899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999996333368877655899999999988999987554311100147860167999989979999999
Q gi|254780472|r 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFG 159 (210)
Q Consensus 80 iLl~SS~~~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~G 159 (210)
T Consensus 136 iLLsSg~tvt~Ah~al~~~-~~~~~~~~L~~Ti~LG~~F~~~Q~~EY~~---~~ft~~d~vygS~Ff~~TGfHG~HViiG 211 (261)
T MTH00075 136 VLLASGVTVTWAHHSIMQG-NRKEAIQSLALTIILGLYFTALQAMEYYE---APFTIADGVYGSTFFVATGFHGLHVIIG 211 (261)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9971135899999999938-89999999999999999999999999997---7776468617899999984899999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999970799830426799998999999999999999999982
Q gi|254780472|r 160 LIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 160 li~L~~~~~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 212 ~~~L~~~~~r~~~~~~~~~~~~~~e~~~~YWHFVDvVWlflf~~vY~WG 260 (261)
T MTH00075 212 SLFLLVCLLRQINFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG 260 (261)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
T ss_conf 9999999999971888866550467767467675767854644520637