HHsearch alignment for GI: 254780472 and conserved domain: MTH00099
>MTH00099 COX3 cytochrome c oxidase subunit III; Validated.
Probab=100.00 E-value=0 Score=331.20 Aligned_cols=192 Identities=23% Similarity=0.446 Sum_probs=166.0
Q ss_pred EEEEECCCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHH
Q ss_conf 2465307765720-------25660268889999999999999999999427888-----8886-600002-40357899
Q gi|254780472|r 13 SLFYVKDKKESCV-------DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVST 78 (210)
Q Consensus 13 ~~~~~~~~~~~~~-------~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT 78 (210)
T Consensus 55 ~~W~rDvi~Es~~~G~ht~~v~~glr~Gm~lFI~SEvmfF~sfFwaffh~~l~p~~elg~~WPP~gi~~~~p~~lPllNT 134 (261)
T MTH00099 55 YQWWRDIIRESTFQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPLEVPLLNT 134 (261)
T ss_pred HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEECCCCCCCHHHHH
T ss_conf 99999874531458988499985003351899999999999999999999713053109867999800367233628889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999633336887765589999999998899998755431110014786016799998997999999
Q gi|254780472|r 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158 (210)
Q Consensus 79 ~iLl~SS~~~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~ 158 (210)
T Consensus 135 ~ILLsSg~tvt~Ah~al~~~-~~~~~~~~L~~Ti~LG~~F~~~Q~~Ey~~---~~ft~~d~vygS~Ff~~TGfHG~HVii 210 (261)
T MTH00099 135 SVLLASGVSITWAHHSLMEG-NRKHMLQALFITILLGLYFTLLQASEYYE---APFTISDGIYGSTFFMATGFHGLHVII 210 (261)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99970146799999999985-49999999999999999999999999974---877615870788999999899999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999970799830426799998999999999999999999982
Q gi|254780472|r 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 159 Gli~L~~~~~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 211 G~~~L~~~~~r~~~~~~~~~~h~~~e~a~~YWHFVDvVWlflf~~iY~WG 260 (261)
T MTH00099 211 GSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG 260 (261)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 99999999999980788866341467767377776747853432334857