HHsearch alignment for GI: 254780472 and conserved domain: MTH00130
>MTH00130 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=331.76 Aligned_cols=191 Identities=21% Similarity=0.443 Sum_probs=165.9
Q ss_pred EEEECCCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCC-CHHHCC-CCHHHHHHH
Q ss_conf 4653077657202-------56602688899999999999999999994278888-----886-600002-403578999
Q gi|254780472|r 14 LFYVKDKKESCVD-------HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA-----GPA-PIDVFD-ISGIFVSTI 79 (210)
Q Consensus 14 ~~~~~~~~~~~~~-------~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~~-----~~~-~~~~~~-~~~~~~nT~ 79 (210)
T Consensus 56 ~W~rDvi~Es~~~G~ht~~v~~glr~Gm~lFI~SEvmfF~sfFwaffh~~l~p~~~lg~~WPP~gi~~~~p~~lPLlNT~ 135 (261)
T MTH00130 56 QWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGITTLDPFEVPLLNTA 135 (261)
T ss_pred HHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99998750046788781888626338999999999999999999999997065212387659998715784447188899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999996333368877655899999999988999987554311100147860167999989979999999
Q gi|254780472|r 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFG 159 (210)
Q Consensus 80 iLl~SS~~~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~G 159 (210)
T Consensus 136 iLLsSg~tvt~Ah~al~~g-~~~~~~~~L~~Ti~LG~~F~~~Q~~Ey~~---~~ft~~d~vygS~Ff~~TGfHG~HViiG 211 (261)
T MTH00130 136 VLLASGVTVTWAHHSIMEG-ERKQAIQSLTLTILLGFYFTFLQAMEYYE---APFTIADGVYGSTFFVATGFHGLHVIIG 211 (261)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9970357899999999836-89999999999999999999999999982---7841047708999999987999999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999970799830426799998999999999999999999982
Q gi|254780472|r 160 LIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 160 li~L~~~~~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 212 ~~~L~v~~~r~~~~~~~~~~h~~~e~a~~YWHFVDvVWlflf~~iY~WG 260 (261)
T MTH00130 212 STFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG 260 (261)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
T ss_conf 9999999999973888855342356646246666656733544500747