HHsearch alignment for GI: 254780472 and conserved domain: MTH00141
>MTH00141 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=321.65 Aligned_cols=183 Identities=24% Similarity=0.453 Sum_probs=160.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 572025660268889999999999999999999427888-----8886-6000024-03578999999999999999999
Q gi|254780472|r 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFDI-SGIFVSTIVLLLSSLSCSFAMLA 94 (210)
Q Consensus 22 ~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~~-~~~~~nT~iLl~SS~~~~~a~~a 94 (210)
T Consensus 69 ht~~v~~~~k~Gm~lFI~SEvmfF~sfFWa~f~~~l~p~~e~g~~WPP~gi~~~~~~~iPllnT~iLl~S~~t~~~a~~~ 148 (259)
T MTH00141 69 HTRKVSKGLRMGMILFIVSEVCFFFAFFWAYFHSSLAPSVEIGACWPPIGIHTLNPFQVPLLNTALLLASGVSVTWAHHS 148 (259)
T ss_pred CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86888637603569999999999999999836755475511085579998778880005088899998388999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96333368877655899999999988999987554311100147860167999989979999999999999999997079
Q gi|254780472|r 95 SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG 174 (210)
Q Consensus 95 ~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~~ 174 (210)
T Consensus 149 ~~~~-~~~~~~~~L~~Ti~LG~~F~~~Q~~Ey~~---~~ft~~d~vygS~Ff~~TGfHG~HVi~G~~~l~~~~~r~~~~~ 224 (259)
T MTH00141 149 LMEG-DYKGALQGLGLTIILGVYFTLLQYGEYYE---TSFSIADSVYGSTFFVATGFHGLHVIVGSTFLFVCLVRILLGH 224 (259)
T ss_pred HHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9958-89999999999999999999999999995---8577668850327888776899999999999999999997279
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9830426799998999999999999999999982
Q gi|254780472|r 175 LISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 175 ~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 225 ~~~~~~~~~e~~~~YWHFVDvVWlflf~~~Y~WG 258 (259)
T MTH00141 225 FSSNHHFGFEAAAWYWHFVDVVWLFLYTSIYWWG 258 (259)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 9966115899999998885878864542323746