HHsearch alignment for GI: 254780472 and conserved domain: MTH00189
>MTH00189 COX3 cytochrome c oxidase subunit III; Provisional.
Probab=100.00 E-value=0 Score=328.53 Aligned_cols=191 Identities=21% Similarity=0.435 Sum_probs=164.9
Q ss_pred EEEECCCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHH
Q ss_conf 4653077657-------2025660268889999999999999999999427888-----8886-600002-403578999
Q gi|254780472|r 14 LFYVKDKKES-------CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTI 79 (210)
Q Consensus 14 ~~~~~~~~~~-------~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~ 79 (210)
T Consensus 55 ~W~rdvi~E~~~~G~ht~~v~~~~~~Gm~lFI~SEvmfF~sfFwa~f~~~l~p~~~lg~~WPP~gi~~~~p~~lPllNT~ 134 (260)
T MTH00189 55 QWWRDVVREATFQGFHTSPVQKGLRYGMILFIISEVFFFLGFFWAFFHSSLAPTVELGMTWPPTGIHPLNPFEVPLLNTA 134 (260)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99987600422687785888813068889999999999999999998863455300287469998558994536288899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999996333368877655899999999988999987554311100147860167999989979999999
Q gi|254780472|r 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFG 159 (210)
Q Consensus 80 iLl~SS~~~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~G 159 (210)
T Consensus 135 iLlsSs~tvt~Ah~al~~~-n~~~~~~~L~~Ti~LG~~Fl~~Q~~EY~~---~~ft~~d~vygS~Ff~~TGfHG~HVi~G 210 (260)
T MTH00189 135 VLLSSGVTVTWAHHSLMEG-NRKEAIQALAFTVMLGLYFTALQAMEYYE---SPFTIADSVYGSTFFVATGFHGLHVIIG 210 (260)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9984889999999999817-69999999999999999999999999972---8786768608779999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999970799830426799998999999999999999999982
Q gi|254780472|r 160 LIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 160 li~L~~~~~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 211 ~~~L~~~~~r~~~~~~~~~~~~~~e~~~~YWHFVDvVWlflf~~vY~WG 259 (260)
T MTH00189 211 STFLLVCLLRQVGYHFTSSHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG 259 (260)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 9999999999972789955207899999998873856832420133756