HHsearch alignment for GI: 254780472 and conserved domain: pfam00510
>pfam00510 COX3 Cytochrome c oxidase subunit III.
Probab=100.00 E-value=0 Score=326.27 Aligned_cols=184 Identities=22% Similarity=0.469 Sum_probs=161.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCC-CHHHCC-CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6572025660268889999999999999999999427888-----8886-600002-40357899999999999999999
Q gi|254780472|r 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-----AGPA-PIDVFD-ISGIFVSTIVLLLSSLSCSFAML 93 (210)
Q Consensus 21 ~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~-----~~~~-~~~~~~-~~~~~~nT~iLl~SS~~~~~a~~ 93 (210)
T Consensus 67 ~ht~~v~~~~~~Gm~~FI~SEvmfF~sfFwa~f~~~l~p~~~~g~~WPP~gi~~~~~~~lPllNT~iLl~Ss~t~t~Ah~ 146 (258)
T pfam00510 67 HHTKAVQKGLRYGMILFIVSEVMFFFSFFWAFFHSSLSPTVELGGTWPPVGIHPLNPFEVPLLNTIILLSSGVTVTWAHH 146 (258)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 78299997688999999999999999999997786426647538606999812788121608778999728999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99633336887765589999999998899998755431110014786016799998997999999999999999999707
Q gi|254780472|r 94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173 (210)
Q Consensus 94 a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~ 173 (210)
T Consensus 147 al~~~-~~~~~~~~L~~Ti~LG~~Fl~~Q~~Ey~~---~~ft~~d~vygS~Ff~~TGfHG~HVi~G~~~l~~~~~r~~~~ 222 (258)
T pfam00510 147 SLISG-NRKGALQGLFLTILLAVYFTGLQAYEYYE---APFTISDGVYGSTFFMATGFHGLHVIIGTIFLLVCLLRLLNY 222 (258)
T ss_pred HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99825-79999999999999999999889999995---788875451888999999899989999999999999999738
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99830426799998999999999999999999982
Q gi|254780472|r 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 174 ~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
T Consensus 223 ~~~~~~~~~~e~~~~YWHFVDvVWlflf~~~Y~WG 257 (258)
T pfam00510 223 HFTSNHHFGFEAAIWYWHFVDVVWLFLYVSIYWWG 257 (258)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 99966025789999888875867823643412737