HHsearch alignment of GI: 254780472 and MMDB domain: 1fft_C_

>1fft_C (C:) Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli}
Probab=100.00  E-value=0  Score=333.23  Aligned_cols=187  Identities=51%  Similarity=0.959  Sum_probs=176.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             72025660268889999999999999999999427888888660000240357899999999999999999996333368
Q gi|254780472|r   23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH  102 (210)
Q Consensus        23 ~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~~~~~~~~~~~~~~~~~nT~iLl~SS~~~~~a~~a~~~~~~~~  102 (210)
                      +..+.++.++|||+||+||.|+|++++++|++.|.+.+.+|++.+.++++.+.+||.+|++||.++++|+++.++ ++++
T Consensus        18 ~~~~~~~~~~g~~~fi~sE~~~F~~l~~ay~~~~~~~~~~~~~~~~~~~~~~~lnT~iLl~SS~~~~~a~~a~~~-~~~~   96 (204)
T 1fft_C           18 HHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYK-NNKS   96 (204)
T ss_dssp             -CCSTTHHHHHHHTTHHHHTTHHHHHHHHHTTTTTTCCCSCCCCCCTTHHHHHHHHHHHGGGTTTTTSGGGTTTT-CCGG
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCHH
T ss_conf             767888764898999999999999999999999974788986100144108999999999899999999999885-8888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             87765589999999998899998755431110014786016799998997999999999999999999707998304267
Q gi|254780472|r  103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR  182 (210)
Q Consensus       103 ~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~~~~~~~~~~  182 (210)
                      +++.++..|+++|.+|+.+|.+||.++.++|.++++|+|+|+||++||+|++||++|+++|.++..|..+++++++++.+
T Consensus        97 ~~~~~L~~t~~lG~~Fl~~Q~~Ey~~l~~~g~~~~~~~~gs~fy~lTG~H~~HVi~G~i~L~~~~~r~~~~~~~~~~~~~  176 (204)
T 1fft_C           97 QVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTR  176 (204)
T ss_dssp             GGTHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSCCCCSTTTHHHHHHHHHTTHHHHTTHHHHHHHHHHHHTCCCTTCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf             99999999999999999999999999998762012014999999999999999999999999999999807998432114


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             9999899999999999999999998209
Q gi|254780472|r  183 LICLSMFWHFLDLIWICVFSFVYLMGVV  210 (210)
Q Consensus       183 ~~~~~~YWHFVdivWi~lf~llYl~g~~  210 (210)
                      +|++++||||||+||+++|+++|++|..
T Consensus       177 ve~~~~YWHFvDivWi~lf~~~Yl~g~~  204 (204)
T 1fft_C          177 IMCLSLFWHFLDVVWICVFTVVYLMGAM  204 (204)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCCCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             8998889999999999999999986279