HHsearch alignment of GI: 254780472 and MMDB domain: 1v54_C_70-261
>1v54_C (C:70-261) Cytochrome C oxidase polypeptide III; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus}
Probab=100.00 E-value=0 Score=317.59 Aligned_cols=184 Identities=23% Similarity=0.428 Sum_probs=168.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----C--CCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 657202566026888999999999999999999942788888-----8--660000240357899999999999999999
Q gi|254780472|r 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-----P--APIDVFDISGIFVSTIVLLLSSLSCSFAML 93 (210)
Q Consensus 21 ~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~~~-----~--~~~~~~~~~~~~~nT~iLl~SS~~~~~a~~ 93 (210)
||+..++++.++|||+||+||+++|++++++|+++|...+++ | .+.+.++++.+++||.+|++||.+++.|++
T Consensus 1 ~h~~~~~~~~~~g~w~fi~sE~~lF~~l~~ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~iLl~SS~~~~~a~~ 80 (192)
T 1v54_C 1 HHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHH 80 (192)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCGGGTSSSSCTTCCCCCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77487763206788999999999999999998876607864337868998840364251689999999999979999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99633336887765589999999998899998755431110014786016799998997999999999999999999707
Q gi|254780472|r 94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173 (210)
Q Consensus 94 a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~~~~~~~ 173 (210)
+.++ +++++++.++..|+++|.+|++.|..||.++ +.++++|+|+|+||++||+|++||++|++.+.++.+|..++
T Consensus 81 ~~~~-~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l---~~~~~~~~~~s~fy~ltglH~lHV~~Gl~~l~~~~~~~~~~ 156 (192)
T 1v54_C 81 SLME-GDRKHMLQALFITITLGVYFTLLQASEYYEA---PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKF 156 (192)
T ss_dssp HHHT-TBHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---SSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9995-7814389999999999999999999998716---77766788504899999999999999999999999999806
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99830426799998999999999999999999982
Q gi|254780472|r 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 174 ~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
+.+++++.++|.+++||||||+||+++|+++|++|
T Consensus 157 ~~~~~~~~~~~~~~~YWHFvd~vWi~lf~~~Yl~g 191 (192)
T 1v54_C 157 HFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG 191 (192)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89844006899999997578876898888888428