HHsearch results for GI: 254780472 and protein with PDBid: 1m56_C
>1m56_C Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.25.1.1 PDB: 1m57_C*
Probab=100.00 E-value=0 Score=316.36 Aligned_cols=187 Identities=22% Similarity=0.447 Sum_probs=163.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---------CCC-CHHH-CCCCHHHHHHHHHHHHHHH
Q ss_conf 7765720256602688899999999999999999994278888---------886-6000-0240357899999999999
Q gi|254780472|r 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA---------GPA-PIDV-FDISGIFVSTIVLLLSSLS 87 (210)
Q Consensus 19 ~~~~~~~~~~~~~~G~w~Fi~SE~~~Fa~lf~~y~~~~~~~~~---------~~~-~~~~-~~~~~~~~nT~iLl~SS~~ 87 (210)
+.+|+....++.|+|||+||+||+|+|+++|++|+..|...+. +|| +... .+...+.+||.+|++||.+
T Consensus 68 ~G~~t~~v~~~~~~Gm~~Fi~SEvm~F~~~f~ay~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~l~l~nT~iLl~Ss~t 147 (266)
T 1m56_C 68 EGDHTPVVRLGLRWGFILFIMSEVMFFSAWFWSFFKHALYPMGPESPIIDGIFPPEGIITFDPWHLPLINTLILLCSGCA 147 (266)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTBTTTBCCCSSCTTCCCCCTTTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 58684888741689999999999999999999999997386788886547878996544367477789999999988999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999633336887765589999999998899998755431110014786016799998997999999999999999
Q gi|254780472|r 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLV 167 (210)
Q Consensus 88 ~~~a~~a~~~~~~~~~~~~~L~~t~~lG~~Fl~~Q~~E~~~l~~~g~~~~~~~~~S~fy~lTG~H~lHV~~Gli~L~~~~ 167 (210)
+++|+++.+++++++.+..++..|+++|.+|+..|.+||.+ .+.+++||+|+|.||++||+|++||++|+++++++.
T Consensus 148 ~~~a~~~~~~~~~~~~~~~~l~~ti~lG~~Fl~~q~~Ey~~---~~~~~~~~~~gS~ff~lTG~Hg~HV~~G~i~l~~~~ 224 (266)
T 1m56_C 148 ATWAHHALVHENNRRDVAWGLALAIALGALFTVFQAYEYSH---AAFGFAGNIYGANFFMATGFHGFHVIVGTIFLLVCL 224 (266)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CSSCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998852322558999999999999999999999998---765650658998999999999999999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99970799830426799998999999999999999999982
Q gi|254780472|r 168 IQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 (210)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~YWHFVdivWi~lf~llYl~g 208 (210)
.|..+++++++++.++|.+++||||||+||+++|+++|++|
T Consensus 225 ~~~~~~~~~~~~~~~~e~~~~YWHFVDvVWi~lf~~vYl~G 265 (266)
T 1m56_C 225 IRVQRGHFTPEKHVGFEAAIWYWHFVDVVWLFLFASIYIWG 265 (266)
T ss_dssp HHHHTCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99971799844017899999999888988998899898017