BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780472|ref|YP_003064885.1| cytochrome o ubiquinol oxidase
subunit III [Candidatus Liberibacter asiaticus str. psy62]
(210 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780472|ref|YP_003064885.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040149|gb|ACT56945.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter
asiaticus str. psy62]
Length = 210
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA
Sbjct: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII
Sbjct: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ
Sbjct: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRLICLSMFWHFLDLIWICVFSFVYLMGVV
Sbjct: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
>gi|315122072|ref|YP_004062561.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495474|gb|ADR52073.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 209
Score = 325 bits (833), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/211 (81%), Positives = 190/211 (90%), Gaps = 3/211 (1%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY 59
MS++KIGKSPN +FY+K++K SC+DH DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY
Sbjct: 1 MSKRKIGKSPNTPVFYLKEEKGSCIDHHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY 60
Query: 60 AAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFI 119
AAGPAPID+F I I VSTIVLLLSSLS SFAMLAS + +KTV WLLVTAFFG+IFI
Sbjct: 61 AAGPAPIDIFGIRDILVSTIVLLLSSLSYSFAMLASEDVK--NKTVFWLLVTAFFGIIFI 118
Query: 120 IMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179
+MEI+EFAHLIS A PQRSAFLSSFF+LV LHGLHVFFGLIW+F+LVIQILKKGLI N
Sbjct: 119 MMEIHEFAHLISKGATPQRSAFLSSFFSLVALHGLHVFFGLIWIFILVIQILKKGLIPDN 178
Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+RRL+CLSMFWHFLDLIWICVFSFVYLMGVV
Sbjct: 179 RRRLMCLSMFWHFLDLIWICVFSFVYLMGVV 209
>gi|150376511|ref|YP_001313107.1| cytochrome o ubiquinol oxidase subunit III [Sinorhizobium medicae
WSM419]
gi|150031058|gb|ABR63174.1| Cytochrome o ubiquinol oxidase subunit III [Sinorhizobium medicae
WSM419]
Length = 210
Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 154/204 (75%), Gaps = 7/204 (3%)
Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66
GK+P F L KE T LGFW+YLMSDCL+FAV F T+AVLG+NYAAGP+P
Sbjct: 13 GKAPAFYL------KEEHHPEGSTMLGFWLYLMSDCLIFAVLFATHAVLGRNYAAGPSPA 66
Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126
D+FD+ I ++T +LL SS++ FAML RL T++W+ VTA FG++F+ +E+YEF
Sbjct: 67 DLFDLPLIALNTSMLLFSSITYGFAMLEMEKGRL-RATLAWMAVTALFGIVFVGLELYEF 125
Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
AHLI A PQRSAFLSSFF LVG HGLHV G+IW+FVL+ Q+ K GLI+ N+RRL+CL
Sbjct: 126 AHLIHEGAGPQRSAFLSSFFTLVGTHGLHVSSGIIWMFVLMAQVAKHGLIAENKRRLMCL 185
Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210
SMFWHFLD++WI VFSFVYLMGV+
Sbjct: 186 SMFWHFLDVVWIGVFSFVYLMGVL 209
>gi|220924641|ref|YP_002499943.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium
nodulans ORS 2060]
gi|219949248|gb|ACL59640.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
nodulans ORS 2060]
Length = 222
Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 149/198 (75%), Gaps = 4/198 (2%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
LFY +++ GT LGFWIYLMSDCL+FAV F TY VLG++YAAGP+P DVF++
Sbjct: 28 PLFYAEEEH---AHESGTLLGFWIYLMSDCLVFAVLFATYGVLGRSYAAGPSPNDVFNLP 84
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ V+T +LLLSS++ FAML K + WL+VT FG FI +E+YEFAH+I
Sbjct: 85 IVAVNTTMLLLSSITYGFAML-EMDKGQVRGMQRWLVVTGLFGAAFIGIELYEFAHMIRE 143
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A PQRS FLSSFFALVG HGLHV FGL+WL VL++Q+ ++GLI+ N RRL+CLSMFWHF
Sbjct: 144 GATPQRSGFLSSFFALVGTHGLHVTFGLVWLSVLMVQVAQRGLIADNMRRLLCLSMFWHF 203
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++WI VF+FVYLMGV+
Sbjct: 204 LDVVWIGVFTFVYLMGVL 221
>gi|307309511|ref|ZP_07589167.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti
BL225C]
gi|306900096|gb|EFN30716.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti
BL225C]
Length = 210
Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 154/205 (75%), Gaps = 9/205 (4%)
Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66
G++P F L E T LGFW+YLMSDCL+FAV F T+AVLG+NYAAGP+P
Sbjct: 13 GQAPAFYL------TEEHHPEGSTMLGFWLYLMSDCLIFAVLFATHAVLGRNYAAGPSPA 66
Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKT-VSWLLVTAFFGMIFIIMEIYE 125
D+FD+ + V+T +LL SS++ FAMLA +R KT ++W+ VTA FG+ F+ +E+YE
Sbjct: 67 DLFDLPLVAVNTSMLLFSSITYGFAMLA--MERYDKKTTLAWMAVTALFGIAFVGLELYE 124
Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185
FAHL+ A PQRSAFLSSFF LVG HGLHV G++W+FVL+ Q+ K+GLI N+RRL+C
Sbjct: 125 FAHLLHEGAGPQRSAFLSSFFTLVGTHGLHVTAGIVWMFVLMAQVAKRGLIPENKRRLMC 184
Query: 186 LSMFWHFLDLIWICVFSFVYLMGVV 210
LSMFWHFLD++WI VFSFVYLMGV+
Sbjct: 185 LSMFWHFLDVVWIGVFSFVYLMGVL 209
>gi|16265065|ref|NP_437857.1| putative cytochrome o ubiquinol oxidase chain III protein
[Sinorhizobium meliloti 1021]
gi|307320581|ref|ZP_07599995.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti
AK83]
gi|13398498|gb|AAK21905.1| ubiquinol oxidase subunit-like protein [Sinorhizobium meliloti]
gi|15141204|emb|CAC49717.1| putative cytochrome o ubiquinol oxidase chain III protein
[Sinorhizobium meliloti 1021]
gi|306893731|gb|EFN24503.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti
AK83]
Length = 210
Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 153/205 (74%), Gaps = 9/205 (4%)
Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66
G++P F L E T LGFW+YLMSDCL+FAV F T+AVLG+NYAAGP+P
Sbjct: 13 GQAPAFYL------TEEHHPEGSTMLGFWLYLMSDCLIFAVLFATHAVLGRNYAAGPSPA 66
Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK-TVSWLLVTAFFGMIFIIMEIYE 125
D+FD+ + V+T +LL SS++ FAMLA +R K T++W+ VTA FG+ F+ +E YE
Sbjct: 67 DLFDLPLVAVNTSMLLFSSITYGFAMLA--MERYEKKATLTWMAVTALFGIAFVGLEFYE 124
Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185
FAHL+ A PQRSAFLSSFF LVG HGLHV G++W+FVL+ Q+ K+GLI N+RRL+C
Sbjct: 125 FAHLLHEGAGPQRSAFLSSFFTLVGTHGLHVTAGIVWMFVLMAQVAKRGLIPENKRRLMC 184
Query: 186 LSMFWHFLDLIWICVFSFVYLMGVV 210
LSMFWHFLD++WI VFSFVYLMGV+
Sbjct: 185 LSMFWHFLDVVWIGVFSFVYLMGVL 209
>gi|319783411|ref|YP_004142887.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317169299|gb|ADV12837.1| cytochrome o ubiquinol oxidase, subunit III [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 208
Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
++F+++D T LGFWIYLMSDCL+FA+ F Y VLG NYAAGPAP D+FD+
Sbjct: 11 TIFHLEDDHGHAESGSSTMLGFWIYLMSDCLIFAMLFAVYGVLGGNYAAGPAPKDLFDLP 70
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ ++T +LLLSS++ FAML A R+ V WL++T FG+ F+ +E+YEFAH I
Sbjct: 71 LVALNTTMLLLSSITYGFAMLEMAKGRVRPMQV-WLVITGLFGLAFLGIELYEFAHFIHE 129
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A PQRS FLSSFF LVG HGLHV FGL+WL VL++Q+ + GLI+ NQRRL+CLSMFWHF
Sbjct: 130 GATPQRSGFLSSFFTLVGTHGLHVTFGLVWLVVLMVQVSRHGLIAANQRRLMCLSMFWHF 189
Query: 193 LDLIWICVFSFVYLMGVV 210
LD+IWI VF+FVYLMG++
Sbjct: 190 LDVIWIGVFTFVYLMGML 207
>gi|227820111|ref|YP_002824082.1| cytochrome O ubiquinol oxidase subunit III [Sinorhizobium fredii
NGR234]
gi|227339110|gb|ACP23329.1| cytochrome o ubiquinol oxidase subunit III [Sinorhizobium fredii
NGR234]
Length = 210
Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 151/206 (73%), Gaps = 7/206 (3%)
Query: 5 KIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA 64
+ GK+P F L +E T LGFW+YLMSDCL+FAV F T+AV+G+NYAAGP+
Sbjct: 11 QEGKAPTFYL------EEEHHPEGSTMLGFWLYLMSDCLIFAVLFATHAVVGRNYAAGPS 64
Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124
P D+FD+ + V+T +LL SS++ FAML K T+ W+ VTA FGM F+ +E+Y
Sbjct: 65 PADLFDLPLVAVNTSMLLFSSITYGFAML-EMEKAKKSTTLVWMAVTALFGMAFVGLELY 123
Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184
EFAH+I A PQRSAFLSSFF LVG HGLHV G+IW+ VL+ Q+ K+GLI N+RRL+
Sbjct: 124 EFAHMIHEGAGPQRSAFLSSFFTLVGTHGLHVTSGIIWMLVLMAQVAKRGLILENKRRLM 183
Query: 185 CLSMFWHFLDLIWICVFSFVYLMGVV 210
CLSMFWHFLD++WI VFSFVYLMGV+
Sbjct: 184 CLSMFWHFLDVVWIGVFSFVYLMGVL 209
>gi|86747366|ref|YP_483862.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2]
gi|86570394|gb|ABD04951.1| Cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2]
Length = 209
Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 150/198 (75%), Gaps = 2/198 (1%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+F+V D+ + + T LGFWIYLMSDCL+FA+ F TY VLG NYAAGPAP D+FD+
Sbjct: 13 PVFHVVDE-HAHPEGASTMLGFWIYLMSDCLIFAILFATYGVLGANYAAGPAPKDLFDLK 71
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ V+T +LL+SS++ FAML + KR + T++WL VT FG+ F+ +E+YEF H+I
Sbjct: 72 LVAVNTAMLLMSSITYGFAML-TMEKRQVGATLAWLGVTGLFGLAFLGIELYEFHHMIHE 130
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A PQRSAFLSSFF LVG HGLHV FG+IWL L++Q+ + GLI N+RRL+CLSMFWHF
Sbjct: 131 GATPQRSAFLSSFFTLVGTHGLHVTFGIIWLVTLMVQVARAGLIEANRRRLMCLSMFWHF 190
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++WI VF+FVYL+G +
Sbjct: 191 LDVVWIGVFTFVYLLGTL 208
>gi|239817018|ref|YP_002945928.1| cytochrome o ubiquinol oxidase subunit III [Variovorax paradoxus
S110]
gi|239803595|gb|ACS20662.1| cytochrome o ubiquinol oxidase, subunit III [Variovorax paradoxus
S110]
Length = 221
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 149/205 (72%), Gaps = 4/205 (1%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
GK P F LF+V + +GT LGFW+YLMSDCL+FA F Y VLG++YAAGP
Sbjct: 18 DATGKPPVFELFHVGNDHHP---ENGTLLGFWLYLMSDCLVFACLFAVYGVLGRSYAAGP 74
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
+ D+FD+ + V+T +LLLSS++ FA+L KR+ T++WL +T G FI +E+
Sbjct: 75 SGADLFDLPLVAVNTSLLLLSSITYGFAVLEMQRKRM-GGTLAWLAITGLLGAGFIGLEL 133
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEFAHLI A PQRSAFLSSFFALVG HGLHV FG++WL VL+IQ+ K G + N+RRL
Sbjct: 134 YEFAHLIHEGAGPQRSAFLSSFFALVGTHGLHVTFGIVWLIVLMIQLPKHGFTAANRRRL 193
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMG 208
+CLSMFWHFLD++WI VF+FVYLMG
Sbjct: 194 MCLSMFWHFLDVVWIGVFTFVYLMG 218
>gi|15887495|ref|NP_353176.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium
tumefaciens str. C58]
gi|15155018|gb|AAK85961.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium
tumefaciens str. C58]
Length = 208
Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 152/204 (74%), Gaps = 6/204 (2%)
Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66
G P +FY+K+ +GT +GFW+YLMSDCL+FAV F TYAVLG++YAAGP+
Sbjct: 11 GAEP--PVFYLKEDHHP---ENGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAAGPSGA 65
Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126
D+FD+ + ++T LLLSS++ FAML K+ + T+ WL +T FG+ F+ +E+YEF
Sbjct: 66 DLFDLKLVAINTGFLLLSSITYGFAML-EMEKQKVKSTLIWLGITGLFGLAFLAVELYEF 124
Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
HLI A PQRSAFLS+FFALVG HGLHV FG IWL L++Q+ K GLI+ N+RRL+CL
Sbjct: 125 HHLIEEGAGPQRSAFLSAFFALVGTHGLHVTFGTIWLVTLMVQVAKHGLIAANKRRLMCL 184
Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210
SMFWHFLD+IWI VFSFVYLMGV+
Sbjct: 185 SMFWHFLDVIWIGVFSFVYLMGVL 208
>gi|325291582|ref|YP_004277446.1| cytochrome ubiquinol oxidase subunit III [Agrobacterium sp. H13-3]
gi|325059435|gb|ADY63126.1| cytochrome ubiquinol oxidase subunit III [Agrobacterium sp. H13-3]
Length = 208
Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 148/197 (75%), Gaps = 4/197 (2%)
Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
+FY+K+ +GT LGFW+YLMSDCL+FA F TYAV+G+NYAAGP+ D+FD+
Sbjct: 16 VFYLKEDHHP---ENGTSLGFWLYLMSDCLIFATLFATYAVVGRNYAAGPSGADLFDLKL 72
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ ++T LL SS++ FAML K+ + T+ WL +T FG+ F+ +E+YEF HLI
Sbjct: 73 VAINTAFLLFSSITYGFAML-EMEKQKVKTTLIWLGITGLFGLAFLAVELYEFHHLIEEG 131
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
A PQRSAFLS+FFALVG HGLHV FG+IWL L+ Q+ K GLI+ N+RRL+CLSMFWHFL
Sbjct: 132 AGPQRSAFLSAFFALVGTHGLHVTFGVIWLVTLMFQVAKHGLIAANKRRLMCLSMFWHFL 191
Query: 194 DLIWICVFSFVYLMGVV 210
D+IWI VFSFVYLMGV+
Sbjct: 192 DVIWIGVFSFVYLMGVL 208
>gi|148253543|ref|YP_001238128.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp.
BTAi1]
gi|146405716|gb|ABQ34222.1| cytochrome bo3 quinol oxidase subunit 3 [Bradyrhizobium sp. BTAi1]
Length = 209
Score = 234 bits (596), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 149/210 (70%), Gaps = 6/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
M K G+ +FYV D+ E + T LGFWIYLMSDCL+FA+ F Y VLG YA
Sbjct: 5 MGSMKAGEP----VFYVVDEHEHP-EGSSTMLGFWIYLMSDCLIFAILFAVYGVLGAKYA 59
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGPAP D+FD+S + V+T LLLSSL+ FAML+ R + +WL +T FG+ F+
Sbjct: 60 AGPAPKDLFDLSLVAVNTSFLLLSSLTYGFAMLSMQQNR-VGAMQAWLAITGLFGLAFLG 118
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+ EFAH+I A PQRSAFLSSFF LVG HGLHV FGLIWL L++Q+ GLI N+
Sbjct: 119 IELTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLIWLVTLMVQVKTYGLIEANR 178
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD+IWI VF+FVYLMG++
Sbjct: 179 RRLVCLSMFWHFLDVIWIGVFTFVYLMGML 208
>gi|91975077|ref|YP_567736.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris
BisB5]
gi|91681533|gb|ABE37835.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris
BisB5]
Length = 209
Score = 234 bits (596), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 148/198 (74%), Gaps = 2/198 (1%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+F+V D+ + + T LGFW+YLMSDCL+FA+ F TY VLG NYAAGPAP D+FD+
Sbjct: 13 PVFHVVDE-HAHPEGASTMLGFWLYLMSDCLIFAILFATYGVLGANYAAGPAPKDLFDLK 71
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ V+T +LLLSS++ FAML A R + T WL +T FG+ F+ +E+YEFAH+I
Sbjct: 72 LVAVNTAMLLLSSITYGFAMLEMARAR-VGATQLWLGITGLFGLAFLGIELYEFAHMIHE 130
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A PQRSAFLSSFF LVG HGLHV FG++WL L++Q+ + GLI N+RRL+CLSMFWHF
Sbjct: 131 GATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMVQVARTGLIEANRRRLMCLSMFWHF 190
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++WI VF+FVYL+G +
Sbjct: 191 LDVVWIGVFTFVYLLGTL 208
>gi|218532590|ref|YP_002423406.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium
chloromethanicum CM4]
gi|218524893|gb|ACK85478.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
chloromethanicum CM4]
Length = 215
Score = 233 bits (595), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 146/209 (69%), Gaps = 6/209 (2%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
R P+F + E GT LGFWIYLMSDCL+FAV F TYAVLG++YAA
Sbjct: 12 DRMSGADVPDFLDLEGEHHPEG-----GTMLGFWIYLMSDCLIFAVLFATYAVLGRSYAA 66
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
GP+P D+FD+ + V+T +LL SS++ FAMLA L KT WL +T FG F+ +
Sbjct: 67 GPSPKDLFDLPIVAVNTSMLLFSSITYGFAMLAMEKDDLA-KTQLWLAITGLFGAAFVGL 125
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
E+YEFAHLI A PQRS FLS+FF LVG HGLHV FGLIWL L+IQ KGL+ N+R
Sbjct: 126 ELYEFAHLIHEGATPQRSGFLSAFFTLVGTHGLHVTFGLIWLVTLMIQTRLKGLVVENKR 185
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RL+CLSMFWHFLD+IWI VF+FVYLMGV+
Sbjct: 186 RLMCLSMFWHFLDVIWIGVFTFVYLMGVL 214
>gi|319795347|ref|YP_004156987.1| cytochrome o ubiquinol oxidase, subunit iii [Variovorax paradoxus
EPS]
gi|315597810|gb|ADU38876.1| cytochrome o ubiquinol oxidase, subunit III [Variovorax paradoxus
EPS]
Length = 221
Score = 233 bits (594), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 148/205 (72%), Gaps = 4/205 (1%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
+ GK P F LF+V + +GT LGFW+YLMSDCL+FA F Y VLG++YAAGP
Sbjct: 18 DQTGKPPVFELFHVGNDHHP---ENGTLLGFWLYLMSDCLIFACLFAVYGVLGRSYAAGP 74
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
+ D+FD+ + ++T +LLLSS++ FAML KR+ + WL +T G FI +E+
Sbjct: 75 SGADLFDLPLVAINTSLLLLSSITYGFAMLEMQKKRM-GGVLVWLAITGLLGAGFIGLEL 133
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEFAHL+ A PQRSAFLSSFFALVG HGLHV FG+IWL VL+IQ+ K G + N+RRL
Sbjct: 134 YEFAHLLHEGAGPQRSAFLSSFFALVGTHGLHVSFGIIWLIVLMIQLPKHGFTAANRRRL 193
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMG 208
+CLSMFWHFLD++WI VF+FVYLMG
Sbjct: 194 MCLSMFWHFLDVVWIGVFTFVYLMG 218
>gi|188584038|ref|YP_001927483.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
populi BJ001]
gi|179347536|gb|ACB82948.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
populi BJ001]
Length = 215
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 147/209 (70%), Gaps = 6/209 (2%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
R +PNF + E T LGFWIYLMSDCL+FAV F TYAVLG++YAA
Sbjct: 12 ERMSDADAPNFLDLEGEHHPEGS-----TMLGFWIYLMSDCLIFAVLFATYAVLGRSYAA 66
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
GP+P D+FD+ + V+T +LL SS++ FAMLA K + KT WL VT FG F+ +
Sbjct: 67 GPSPKDLFDLPIVAVNTSMLLFSSITYGFAMLA-MEKDDLSKTQLWLAVTGLFGAAFVGL 125
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
E++EF+HLI A PQRS FLS+FF LVG HGLHV FGLIWL L++Q KGLI N+R
Sbjct: 126 ELWEFSHLIHEGATPQRSGFLSAFFTLVGTHGLHVTFGLIWLVTLMVQTRWKGLIPENKR 185
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RL+CLSMFWHFLD+IWI VF+FVYLMGV+
Sbjct: 186 RLMCLSMFWHFLDVIWIGVFTFVYLMGVL 214
>gi|163853732|ref|YP_001641775.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
extorquens PA1]
gi|240141157|ref|YP_002965637.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
extorquens AM1]
gi|163665337|gb|ABY32704.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
extorquens PA1]
gi|240011134|gb|ACS42360.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
extorquens AM1]
Length = 215
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 146/209 (69%), Gaps = 6/209 (2%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
R P+F + E GT LGFWIYLMSDCL+FAV F TYAVLG++YAA
Sbjct: 12 DRMSGADVPDFLDLEGEHHPEG-----GTMLGFWIYLMSDCLIFAVLFATYAVLGRSYAA 66
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
GP+P D+FD+ + V+T +LL SS++ FAMLA L KT WL +T FG F+ +
Sbjct: 67 GPSPKDLFDLPIVAVNTSMLLFSSITYGFAMLAMEKDDLA-KTQLWLAITGLFGAAFVGL 125
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
E+YEFAHLI A PQRS FLS+FF LVG HGLHV FGLIWL L+IQ KGL + N+R
Sbjct: 126 ELYEFAHLIHEGATPQRSGFLSAFFTLVGTHGLHVTFGLIWLVTLMIQTRLKGLGAENKR 185
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RL+CLSMFWHFLD+IWI VF+FVYLMGV+
Sbjct: 186 RLMCLSMFWHFLDVIWIGVFTFVYLMGVL 214
>gi|13475708|ref|NP_107275.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium loti
MAFF303099]
gi|14026464|dbj|BAB53061.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium loti
MAFF303099]
Length = 208
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 147/204 (72%), Gaps = 5/204 (2%)
Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66
G P F L +++ + T LGFW+YLMSDCL+FA+ F Y VLG NYAAGPAP
Sbjct: 9 GTEPVFHL----EEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAGPAPK 64
Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126
D+FD+ + V+T +LLLSS++ FAML R + T +WL VT FG+ F+ +E+YEF
Sbjct: 65 DLFDLDLVAVNTTMLLLSSITYGFAMLTMDKGR-VAATQAWLAVTGLFGLAFLSIELYEF 123
Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
AH+I A PQRSAFLSSFF LVG HGLHV FG++WL L+ Q+ + GLI N+RR++CL
Sbjct: 124 AHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMTQVARFGLIEANRRRVMCL 183
Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210
SMFWHFLD++WI VF+FVYLMG++
Sbjct: 184 SMFWHFLDVVWIGVFTFVYLMGML 207
>gi|311108525|ref|YP_003981378.1| cytochrome O ubiquinol oxidase subunit III 2 [Achromobacter
xylosoxidans A8]
gi|310763214|gb|ADP18663.1| cytochrome O ubiquinol oxidase, subunit III 2 [Achromobacter
xylosoxidans A8]
Length = 213
Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 145/203 (71%), Gaps = 4/203 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
P +FYV + +GT LGFW+YLMSDCL+FA F TY VLG+NYAAGP+ D
Sbjct: 14 APPAEPVFYVAGEHHP---KNGTLLGFWVYLMSDCLIFACLFATYGVLGRNYAAGPSGAD 70
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+FD+ + V+T +LLLSS++ FAML R + T WL VT G+ F+ +E+YEFA
Sbjct: 71 LFDLPLVAVNTALLLLSSITYGFAMLEMRRNR-VGATQLWLAVTGILGLGFLSLELYEFA 129
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI A PQRSAFLSSFF LVG HGLHV FG++WL ++IQ+ GLI N+RRL+CLS
Sbjct: 130 HLIHQGAGPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTMMIQVQMHGLIPENRRRLMCLS 189
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
MFWHFLDLIW+ VF+FVYLMGV+
Sbjct: 190 MFWHFLDLIWVGVFTFVYLMGVL 212
>gi|146338787|ref|YP_001203835.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp.
ORS278]
gi|146191593|emb|CAL75598.1| Cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain
C) [Bradyrhizobium sp. ORS278]
Length = 209
Score = 231 bits (589), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 146/197 (74%), Gaps = 2/197 (1%)
Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
+FYV D+ + + T LGFWIYLMSDCL+FA+ F Y VLG YAAGPAP D+FD+S
Sbjct: 14 VFYVVDEHDHP-EGSSTQLGFWIYLMSDCLIFAILFAVYGVLGTKYAAGPAPKDLFDLSL 72
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ ++T LLLSSL+ FAML+ R + WL+VT FG+ F+ +E+ EFAH+I
Sbjct: 73 VALNTSFLLLSSLTYGFAMLSMQQNR-VGAMQGWLVVTGLFGLAFLGIELTEFAHMIHEG 131
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
A PQRSAFLSSFF LVG HGLHV FGL+WL L++Q+ + GLI N+RRL+CLSMFWHFL
Sbjct: 132 ATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQVKRFGLIEANRRRLVCLSMFWHFL 191
Query: 194 DLIWICVFSFVYLMGVV 210
D+IWI VF+FVYLMG++
Sbjct: 192 DVIWIGVFTFVYLMGML 208
>gi|307293186|ref|ZP_07573032.1| cytochrome o ubiquinol oxidase, subunit III [Sphingobium
chlorophenolicum L-1]
gi|306881252|gb|EFN12468.1| cytochrome o ubiquinol oxidase, subunit III [Sphingobium
chlorophenolicum L-1]
Length = 207
Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 141/186 (75%), Gaps = 3/186 (1%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
H+G T LGFW+YLMSDCL+FA+ F TYAVLG +YA GP P D+FD+ I ++T +LL S
Sbjct: 22 HEGHSTNLGFWMYLMSDCLIFAILFATYAVLGGSYAGGPGPKDLFDLPLIALNTAMLLFS 81
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ FAMLA R + T WL VT FG F+ +E+YEF+HLI A PQRSAFLSS
Sbjct: 82 SITYGFAMLAMEKNR-VSATQGWLFVTLLFGGAFLCIELYEFSHLIHEGAGPQRSAFLSS 140
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FF LVG HGLHV FG +WL L++Q+ KKGLI N+RRL+CLSMFWHFLD+IWI VF+FV
Sbjct: 141 FFTLVGTHGLHVTFGSVWLITLMVQVAKKGLIPANKRRLMCLSMFWHFLDVIWIGVFTFV 200
Query: 205 YLMGVV 210
YLMGV+
Sbjct: 201 YLMGVL 206
>gi|254563669|ref|YP_003070764.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium
extorquens DM4]
gi|254270947|emb|CAX26952.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
extorquens DM4]
Length = 215
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 145/209 (69%), Gaps = 6/209 (2%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
R P+F + E GT LGFWIYLMSDCL+FAV F TYAVLG++YAA
Sbjct: 12 DRMSGADVPDFLDLEGEHHPEG-----GTMLGFWIYLMSDCLIFAVLFATYAVLGRSYAA 66
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
GP+P D+FD+ + V+T +LL SS++ FAMLA L KT WL +T FG F+ +
Sbjct: 67 GPSPKDLFDLPIVAVNTSMLLFSSITYGFAMLAMEKDDLA-KTQLWLAITGLFGAAFVGL 125
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
E+YEFAHLI A PQRS FLS+FF LVG HGLHV FGLIWL L+IQ KGL+ N+
Sbjct: 126 ELYEFAHLIHEGATPQRSGFLSAFFTLVGTHGLHVTFGLIWLVTLMIQTRLKGLVVENKL 185
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RL+CLSMFWHFLD+IWI VF+FVYLMGV+
Sbjct: 186 RLMCLSMFWHFLDVIWIGVFTFVYLMGVL 214
>gi|222107118|ref|YP_002547909.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium vitis S4]
gi|221738297|gb|ACM39193.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium vitis S4]
Length = 205
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 144/196 (73%), Gaps = 4/196 (2%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
FY+ ++ T LGFW+YLMSDCL+FA+ F TYAVLG+NYAAGPAP D+FD+ +
Sbjct: 13 FYLTEEHHP---ESSTNLGFWLYLMSDCLIFAMLFATYAVLGRNYAAGPAPADLFDLKLV 69
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
++T +LL SS++ FAML S K T+ WL VT FG IF+ +E+YEF HLI A
Sbjct: 70 AINTAMLLFSSITYGFAML-SMEKNNKAATLIWLGVTGVFGAIFLALELYEFVHLIHEGA 128
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RSAFLS+FF LVG HGLHV FG+IWL L+ Q+ K GLI N+RRL+CLSMFWHFLD
Sbjct: 129 GPNRSAFLSAFFTLVGTHGLHVTFGIIWLVTLMAQVGKHGLIEANRRRLMCLSMFWHFLD 188
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VFS+VYL+GV+
Sbjct: 189 VIWIGVFSYVYLLGVI 204
>gi|86360306|ref|YP_472194.1| cytochrome O ubiquinol oxidase, subunit III protein [Rhizobium etli
CFN 42]
gi|86284408|gb|ABC93467.1| cytochrome O ubiquinol oxidase, subunit III protein [Rhizobium etli
CFN 42]
Length = 206
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 147/210 (70%), Gaps = 5/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MS Q I ++ + +D T LGFW+YLMSDCL+FAV F T+ VLG+NYA
Sbjct: 1 MSDQTIDRAEKPEFYLTEDHHPE----GSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 56
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGP+P D+FD+ + ++T +LLLSS++ FAML + +T+ WL VT FG FI
Sbjct: 57 AGPSPADLFDLPIVALNTSMLLLSSITYGFAML-QMERNAKAETLFWLAVTGLFGAAFIG 115
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GL+ N+
Sbjct: 116 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLVEANR 175
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD++WI VFSFVYL+GVV
Sbjct: 176 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVV 205
>gi|330824828|ref|YP_004388131.1| cytochrome o ubiquinol oxidase subunit III [Alicycliphilus
denitrificans K601]
gi|329310200|gb|AEB84615.1| cytochrome o ubiquinol oxidase, subunit III [Alicycliphilus
denitrificans K601]
Length = 210
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FAV F TY VLG+NYA GP ++FD+ + ++T LLLSS++
Sbjct: 29 NGTSLGFWLYLMSDCLIFAVLFATYGVLGRNYAGGPTGAELFDLKLVAINTAFLLLSSIT 88
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML +R + T++WL VT G+ F+ +E+YEFAHL+ A PQRSAFLSSFF
Sbjct: 89 FGFAML-QKQQRDVRGTLAWLAVTGLLGLAFLAVELYEFAHLLHEGAGPQRSAFLSSFFT 147
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV FG IWL L+IQI K GLI N RRL CLSMFWHFLD++WI VF+FVYLM
Sbjct: 148 LVGTHGLHVTFGTIWLVTLMIQIGKHGLIPENARRLNCLSMFWHFLDVVWIGVFTFVYLM 207
Query: 208 GVV 210
GV+
Sbjct: 208 GVL 210
>gi|326317720|ref|YP_004235392.1| cytochrome o ubiquinol oxidase subunit III [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323374556|gb|ADX46825.1| cytochrome o ubiquinol oxidase, subunit III [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 210
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVL 81
E +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD+S + ++T L
Sbjct: 23 EEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLSLVAINTAFL 82
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
LLSS++ FAML K + T+ WL VT FG+ F+ +E+YEF HLI A PQRSAF
Sbjct: 83 LLSSITFGFAML-QKQKGNVGGTLGWLAVTGLFGLCFLGLELYEFHHLIHEGAGPQRSAF 141
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
LS+FF LVG HGLHV FGLIWL VL+IQI K GLI N+RRL+CLSMFWHFLD++WI VF
Sbjct: 142 LSAFFTLVGTHGLHVTFGLIWLVVLMIQISKHGLIHENKRRLMCLSMFWHFLDVVWIGVF 201
Query: 202 SFVYLMGVV 210
+FVYLMGV+
Sbjct: 202 TFVYLMGVL 210
>gi|319762687|ref|YP_004126624.1| cytochrome o ubiquinol oxidase, subunit iii [Alicycliphilus
denitrificans BC]
gi|317117248|gb|ADU99736.1| cytochrome o ubiquinol oxidase, subunit III [Alicycliphilus
denitrificans BC]
Length = 210
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FAV F TY VLG+NYA GP ++FD+ + ++T LLLSS++
Sbjct: 29 NGTSLGFWLYLMSDCLIFAVLFATYGVLGRNYAGGPTGAELFDLKLVAINTAFLLLSSIT 88
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML +R + T++WL VT G+ F+ +E+YEFAHL+ A PQRSAFLSSFF
Sbjct: 89 FGFAML-QKQQRDVRGTLAWLAVTGLLGLAFLAVELYEFAHLLHEGAGPQRSAFLSSFFT 147
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV FG IWL L+IQI K GLI N RRL CLSMFWHFLD++WI VF+FVYLM
Sbjct: 148 LVGTHGLHVTFGTIWLVTLMIQIGKHGLIPENARRLNCLSMFWHFLDVVWIGVFTFVYLM 207
Query: 208 GVV 210
GV+
Sbjct: 208 GVL 210
>gi|120610895|ref|YP_970573.1| cytochrome c oxidase subunit III [Acidovorax citrulli AAC00-1]
gi|120589359|gb|ABM32799.1| cytochrome bo3 quinol oxidase subunit 3 [Acidovorax citrulli
AAC00-1]
Length = 210
Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVL 81
E +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD++ + ++T L
Sbjct: 23 EEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLVAINTAFL 82
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
LLSS++ FAML K + T+ WL +T FG+ F+ +E+YEF HLI A PQRSAF
Sbjct: 83 LLSSITFGFAML-QKQKGNVRGTLGWLAITGLFGLCFLGLELYEFHHLIHQGAGPQRSAF 141
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
LS+FF LVG HGLHV FGLIWL VL+IQI K GLI N+RRL+CLSMFWHFLD++WI VF
Sbjct: 142 LSAFFTLVGTHGLHVTFGLIWLVVLMIQIGKHGLIHENKRRLMCLSMFWHFLDVVWIGVF 201
Query: 202 SFVYLMGVV 210
+FVYLMGV+
Sbjct: 202 TFVYLMGVL 210
>gi|209546367|ref|YP_002278257.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539224|gb|ACI59157.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 208
Score = 228 bits (581), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 146/210 (69%), Gaps = 5/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MS Q I S + +D + T LGFW+YLMSDCL+FAV F T+ VLG+NYA
Sbjct: 3 MSDQTIDTSEKPEFYLTEDHHPE----NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 58
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGP+P D+FD+ + ++T +LLLSS++ FAML + +T+ WL VT FG FI
Sbjct: 59 AGPSPADLFDLPIVALNTSMLLLSSITYGFAML-QMERNAKAETLFWLAVTGLFGAAFIG 117
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GL N+
Sbjct: 118 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLAEANR 177
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD++WI VFSFVYL+GV+
Sbjct: 178 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVL 207
>gi|222084385|ref|YP_002542914.1| cytochrome o ubiquinol oxidase, subunit III [Agrobacterium
radiobacter K84]
gi|221721833|gb|ACM24989.1| cytochrome o ubiquinol oxidase, subunit III [Agrobacterium
radiobacter K84]
Length = 209
Score = 227 bits (579), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 146/206 (70%), Gaps = 7/206 (3%)
Query: 5 KIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA 64
K G++P F L E T LGFWIY+MSDCL+FAV F TYAVLG NYAAGP+
Sbjct: 10 KDGETPAFYL------TEEHHPEGSTMLGFWIYIMSDCLIFAVLFATYAVLGHNYAAGPS 63
Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124
P D+F++ + ++T +LL SS++ FAMLA K T+ WL +T FG FI E+Y
Sbjct: 64 PADLFELPLVALNTAMLLFSSITYGFAMLA-MEKGNKSGTMMWLAITGLFGAAFIYFELY 122
Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184
EF HLI A PQRSAFLS+FFALVG HGLHV G++WL L++Q+ + GLI N+RRL+
Sbjct: 123 EFYHLILEGAGPQRSAFLSAFFALVGTHGLHVTVGIVWLITLMVQVSQHGLIPENKRRLM 182
Query: 185 CLSMFWHFLDLIWICVFSFVYLMGVV 210
CLSMFWHFLD++WI VFSFVYLMGV+
Sbjct: 183 CLSMFWHFLDVVWIGVFSFVYLMGVL 208
>gi|149926919|ref|ZP_01915178.1| cytochrome o ubiquinol oxidase, subunit III [Limnobacter sp.
MED105]
gi|149824471|gb|EDM83689.1| cytochrome o ubiquinol oxidase, subunit III [Limnobacter sp.
MED105]
Length = 207
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 145/196 (73%), Gaps = 5/196 (2%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
+YVKD +G+ LGFWIYLMSDCL+FA F TYAV+G+NYA GP ++FD++ +
Sbjct: 16 YYVKDHHPK----NGSSLGFWIYLMSDCLIFACLFATYAVIGRNYAGGPTGAEIFDLNLV 71
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
++T LLLSS++ AM+ R + KT+ WL +T G+ F+ +EIYEF H IS+ A
Sbjct: 72 ALNTAFLLLSSITYGVAMVG-MQNRNVKKTIQWLAITGVLGLAFLAVEIYEFWHFISIGA 130
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
PQ S FL++FFALVG HGLHVFFG+IWL VL+ Q+ K GLI N+RR++CLSMFWHFLD
Sbjct: 131 TPQTSGFLTAFFALVGTHGLHVFFGIIWLVVLLFQLKKHGLIVENRRRVMCLSMFWHFLD 190
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+FVYLMGV+
Sbjct: 191 VIWIGVFTFVYLMGVL 206
>gi|116255240|ref|YP_771073.1| putative cytochrome o ubiquinol oxidase subunit III [Rhizobium
leguminosarum bv. viciae 3841]
gi|115259888|emb|CAK02982.1| putative cytochrome o ubiquinol oxidase subunit III [Rhizobium
leguminosarum bv. viciae 3841]
Length = 209
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 146/210 (69%), Gaps = 5/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MS Q I + + +D + T LGFW+YLMSDCL+FAV F T+ VLG+NYA
Sbjct: 4 MSDQTIDTAEKPEFYLTEDHHPE----NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 59
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGP+P D+FD+ + ++T +LL SS++ FAML + +T+ WL VT FG FI
Sbjct: 60 AGPSPADLFDLPIVALNTSMLLFSSITYGFAML-QMERNAKAETLFWLGVTGLFGAAFIG 118
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+
Sbjct: 119 LELYEFVHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 178
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD++WI VFSFVYL+GV+
Sbjct: 179 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVL 208
>gi|294012086|ref|YP_003545546.1| cytochrome o ubiquinol oxidase subunit III [Sphingobium japonicum
UT26S]
gi|292675416|dbj|BAI96934.1| cytochrome o ubiquinol oxidase subunit III [Sphingobium japonicum
UT26S]
Length = 200
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 139/186 (74%), Gaps = 3/186 (1%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
H+G T LGFW+YLMSDCL+FA+ F TYAVLG +YA GP P D+FD+ I ++T +LL S
Sbjct: 15 HEGHSTMLGFWMYLMSDCLIFAILFATYAVLGGSYAGGPGPKDLFDLPLIALNTAMLLFS 74
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ FAMLA R + T WL VT FG F+ +E+YEF+HLI A P RSAFLSS
Sbjct: 75 SITYGFAMLAMEKNR-VSATQGWLFVTLLFGGAFLFIELYEFSHLIHEGAGPWRSAFLSS 133
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FF LVG HGLHV FG IWL L+ Q+ KKGLI N+RRL+CLSMFWHFLD+IWI VF+FV
Sbjct: 134 FFTLVGTHGLHVTFGSIWLVTLMAQVAKKGLIPANKRRLLCLSMFWHFLDVIWIGVFTFV 193
Query: 205 YLMGVV 210
YLMGV+
Sbjct: 194 YLMGVL 199
>gi|222111441|ref|YP_002553705.1| cytochrome o ubiquinol oxidase subunit III [Acidovorax ebreus TPSY]
gi|221730885|gb|ACM33705.1| cytochrome o ubiquinol oxidase, subunit III [Acidovorax ebreus
TPSY]
Length = 211
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD+S + ++T LL SS++
Sbjct: 30 NGTSLGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLSLVAINTAFLLTSSIT 89
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML T++WL VT G+ F+ +E+YEFAHLI A PQRSAFLS+FF
Sbjct: 90 FGFAMLQKQAGN-ARGTLAWLAVTGLLGLAFLGVELYEFAHLIHQGATPQRSAFLSAFFT 148
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV FGLIWL L+IQI K GLI N+RRL CLSMFWHFLD++WI VF+FVYLM
Sbjct: 149 LVGTHGLHVTFGLIWLVTLMIQISKHGLIHENKRRLNCLSMFWHFLDVVWIGVFTFVYLM 208
Query: 208 GVV 210
GV+
Sbjct: 209 GVL 211
>gi|152980608|ref|YP_001354328.1| cytochrome o ubiquinol oxidase subunit III [Janthinobacterium sp.
Marseille]
gi|151280685|gb|ABR89095.1| cytochrome o ubiquinol oxidase subunit III [Janthinobacterium sp.
Marseille]
Length = 210
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 142/196 (72%), Gaps = 5/196 (2%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
+YV++ +GT LGFW+YLMSDCL+FA F TYAVLG+NYA GP ++FD+ +
Sbjct: 19 YYVQEHHPE----NGTLLGFWLYLMSDCLIFACLFATYAVLGRNYAGGPTGAELFDLPLV 74
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
+T LLLSS++ FAML + KRL T+ WL +T G F+ +E+YEF+HLI A
Sbjct: 75 AANTAFLLLSSITYGFAMLEAQRKRL-KATMIWLAITGLLGAAFLALELYEFSHLIHEGA 133
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
PQRSAFL+SFFALV HGLHV FG+IWL L+ Q+ + GLI N RRL+CLSMFWHFLD
Sbjct: 134 GPQRSAFLTSFFALVATHGLHVTFGIIWLITLMFQLKRHGLIPENGRRLMCLSMFWHFLD 193
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+FVYLMGV+
Sbjct: 194 VIWIGVFTFVYLMGVL 209
>gi|241667023|ref|YP_002985107.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240862480|gb|ACS60145.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 208
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 146/210 (69%), Gaps = 5/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MS Q I + + +D + T LGFW+YLMSDCL+FAV F T+ VLG+NYA
Sbjct: 3 MSDQTIDTAEKPEFYLTEDHHPE----NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 58
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGP+P D+FD+ + ++T +LL SS++ FAML + +T+ WL VT FG FI
Sbjct: 59 AGPSPADLFDLPIVALNTSMLLFSSITYGFAML-QMERNAKAETLFWLGVTGLFGAAFIG 117
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+
Sbjct: 118 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 177
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD++WI VFSFVYL+GV+
Sbjct: 178 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVL 207
>gi|327188657|gb|EGE55863.1| cytochrome O ubiquinol oxidase protein, subunit III [Rhizobium etli
CNPAF512]
Length = 206
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 145/210 (69%), Gaps = 5/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MS + + + +D + T LGFW+YLMSDCL+FAV F T+ VLG+NYA
Sbjct: 1 MSDHTVDTAEKPEFYLTEDHHPE----NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 56
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AGP+P D+FD+ + ++T +LL SS++ FAML + +T+ WL VT FG FI
Sbjct: 57 AGPSPADLFDLPIVALNTSMLLFSSITYGFAML-QMERNAKAETLFWLAVTGLFGAAFIG 115
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+
Sbjct: 116 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 175
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD++WI VFSFVYL+GVV
Sbjct: 176 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVV 205
>gi|158423724|ref|YP_001525016.1| cytochrome o ubiquinol oxidase subunit III [Azorhizobium
caulinodans ORS 571]
gi|158330613|dbj|BAF88098.1| cytochrome o ubiquinol oxidase subunit III [Azorhizobium
caulinodans ORS 571]
Length = 208
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 145/198 (73%), Gaps = 2/198 (1%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+FY D+ H T LGFWIYLMSDCL+FA+ F T+ VLG NYAAGP P D+FD+
Sbjct: 12 PVFYEVDEHAHPEGHS-TALGFWIYLMSDCLIFAMLFATFGVLGGNYAAGPGPKDLFDLK 70
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ V+T +LL SS++ FAMLA R + WL +TA FG+ F+ +E+YEF H+I
Sbjct: 71 LVAVNTAMLLFSSITYGFAMLAMEKGRQSQVQL-WLAITALFGLAFLSIELYEFHHMIHE 129
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A PQRSAFLS+FF LVG HG+HV FGLIWL +++Q+ + GLI+ N+RRL+CLSMFWHF
Sbjct: 130 GAGPQRSAFLSAFFTLVGTHGVHVTFGLIWLVTMMVQVGRFGLITANRRRLMCLSMFWHF 189
Query: 193 LDLIWICVFSFVYLMGVV 210
LD+IWI VF+FVYLMG++
Sbjct: 190 LDVIWIGVFTFVYLMGML 207
>gi|121595098|ref|YP_986994.1| cytochrome c oxidase subunit III [Acidovorax sp. JS42]
gi|120607178|gb|ABM42918.1| cytochrome bo3 quinol oxidase subunit 3 [Acidovorax sp. JS42]
Length = 211
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD++ + ++T LL SS++
Sbjct: 30 NGTSLGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLVAINTAFLLTSSIT 89
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML + T++WL VT G+ F+ +E+YEFAH+I + A PQRSAFLSSFF
Sbjct: 90 FGFAMLQKQAGN-VRGTLTWLAVTGLLGLAFLGVELYEFAHMIHLGATPQRSAFLSSFFT 148
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV FGLIWL L++QI K GLI N+RRL CLSMFWHFLD++WI VF+FVYLM
Sbjct: 149 LVGTHGLHVTFGLIWLVTLMLQISKHGLIHENKRRLNCLSMFWHFLDVVWIGVFTFVYLM 208
Query: 208 GVV 210
GV+
Sbjct: 209 GVL 211
>gi|194292956|ref|YP_002008863.1| cytochrome o ubiquinol oxidase, subunit iii [Cupriavidus
taiwanensis LMG 19424]
gi|193226860|emb|CAQ72811.1| cytochrome o ubiquinol oxidase, subunit III [Cupriavidus
taiwanensis LMG 19424]
Length = 224
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 143/207 (69%), Gaps = 4/207 (1%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
Q P FY+ ++ +GT LGFW+YLMSDCL+FA F Y VLG+NYA GP
Sbjct: 21 QHAPAQPAALRFYMTEEYHVP---NGTLLGFWLYLMSDCLVFACLFAAYGVLGRNYAGGP 77
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
+ ++FD+ + ++T LLLSS++ FAML + RL T WL VT G F+ +EI
Sbjct: 78 SGAELFDLPLVALNTSFLLLSSITYGFAMLEAQRGRL-GPTQGWLAVTGLLGAAFLAVEI 136
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEFAHL+ A PQRS FL+SFFALVG HGLHV FG++WL LV Q+ + GLI N+RRL
Sbjct: 137 YEFAHLVGEGAGPQRSGFLTSFFALVGTHGLHVTFGIVWLVTLVSQLRRHGLIPENRRRL 196
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210
+CLSMFWHFLD++WI VF+FVYLMGV+
Sbjct: 197 MCLSMFWHFLDVVWIGVFTFVYLMGVL 223
>gi|160899493|ref|YP_001565075.1| cytochrome o ubiquinol oxidase subunit III [Delftia acidovorans
SPH-1]
gi|160365077|gb|ABX36690.1| cytochrome o ubiquinol oxidase, subunit III [Delftia acidovorans
SPH-1]
Length = 210
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVL 81
E +GT LGFW+YLMSDCL+FA F TY VLG+NYAAGP +FD+ + ++T L
Sbjct: 23 EEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRNYAAGPTGAQLFDLPLVAMNTAFL 82
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
LLSS++ FAML +L T WL +T FG+ F+ +E+YEF+HL+ A PQRSAF
Sbjct: 83 LLSSITFGFAMLQKQQGKL-GGTQLWLAITGLFGLCFLGLELYEFSHLLHEGAGPQRSAF 141
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
LSSFF LVG HGLHV FGLIWL L+IQI K GL N RRL+CLSMFWHFLD++WI VF
Sbjct: 142 LSSFFTLVGTHGLHVSFGLIWLVTLMIQINKHGLTHENNRRLMCLSMFWHFLDVVWIGVF 201
Query: 202 SFVYLMGVV 210
+FVYLMGV+
Sbjct: 202 TFVYLMGVL 210
>gi|119387828|ref|YP_918862.1| cytochrome c oxidase, subunit III [Paracoccus denitrificans PD1222]
gi|461329|emb|CAA55034.1| cytochrome ba(3) [Paracoccus denitrificans]
gi|119378403|gb|ABL73166.1| cytochrome ba3 quinol oxidase subunit 3 [Paracoccus denitrificans
PD1222]
Length = 205
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 138/181 (76%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLMSDCLMFAV F Y VLG ++AAGP P D+FD+ + V+T +LLLSS++
Sbjct: 26 TSLGFWVYLMSDCLMFAVLFAVYGVLGTSFAAGPGPKDLFDLELVAVNTAMLLLSSITFG 85
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K T+ WL VT FFG+ F+ +E+YEF HLI + A PQRS FLS+FF LV
Sbjct: 86 FAMLAMG-KGDQRGTLRWLAVTLFFGLCFLAIELYEFHHLIHIGAGPQRSGFLSAFFTLV 144
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV FG IWL L++QI + GLI NQRR++CLSMFWHFLD+IWI VF+FVYL+G+
Sbjct: 145 GTHGLHVTFGSIWLVTLMVQITRTGLIPANQRRMVCLSMFWHFLDVIWIGVFTFVYLLGM 204
Query: 210 V 210
+
Sbjct: 205 I 205
>gi|27375262|ref|NP_766791.1| cytochrome O ubiquinol oxidase subunit III [Bradyrhizobium
japonicum USDA 110]
gi|27348398|dbj|BAC45416.1| cytochrome O ubiquinol oxidase subunit III [Bradyrhizobium
japonicum USDA 110]
Length = 209
Score = 224 bits (571), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 144/198 (72%), Gaps = 2/198 (1%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+FY+ D+ + T LGFWIYLMSDCL+FA+ F + VLG NYAAGPAP D+FD+
Sbjct: 13 PVFYLADEHPHPEGYS-TSLGFWIYLMSDCLIFAMLFAAFGVLGANYAAGPAPKDLFDLD 71
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ V+T +LLLSS++ FAML + I +T WL +T FG FI +E+ EFAH+I
Sbjct: 72 LVAVNTSMLLLSSITYGFAMLTMQQNK-IAQTQMWLAITGLFGAAFIGIELTEFAHMIHE 130
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A PQRSAFLS+FF LVG HGLHV GLIWL L++Q+ K GLI N+RRL+CLSMFWHF
Sbjct: 131 GATPQRSAFLSAFFTLVGTHGLHVSCGLIWLVTLMVQVWKFGLIEANRRRLMCLSMFWHF 190
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++WI VF+FVYL+GV+
Sbjct: 191 LDVVWIGVFTFVYLLGVL 208
>gi|293607336|ref|ZP_06689675.1| quinol oxidase subunit III [Achromobacter piechaudii ATCC 43553]
gi|292814180|gb|EFF73322.1| quinol oxidase subunit III [Achromobacter piechaudii ATCC 43553]
Length = 213
Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 146/207 (70%), Gaps = 4/207 (1%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
Q P +FYV + +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP
Sbjct: 10 QGGATPPTEPVFYVPGEHHP---KNGTLLGFWVYLMSDCLIFACLFATYGVLGRSYAAGP 66
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
+ D+FD+ + V+T +LLLSS++ FAML R I T WL VT G+ F+ +EI
Sbjct: 67 SGADLFDLPLVAVNTSLLLLSSITYGFAMLEMRRNR-IGATQLWLAVTGLLGLGFLSLEI 125
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEFAHLI A PQRSAFLS+FF LVG HGLHV FG++WL ++IQ+ GLI N+RRL
Sbjct: 126 YEFAHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGIVWLVTMMIQVQMHGLIPENRRRL 185
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210
+CLSMFWHFLDLIW+ VF+FVYLMGV+
Sbjct: 186 MCLSMFWHFLDLIWVGVFTFVYLMGVL 212
>gi|288962726|ref|YP_003453020.1| cytochrome o ubiquinol oxidase subunit III [Azospirillum sp. B510]
gi|288914992|dbj|BAI76476.1| cytochrome o ubiquinol oxidase subunit III [Azospirillum sp. B510]
Length = 212
Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 146/200 (73%), Gaps = 7/200 (3%)
Query: 13 SLFYVKDKKESCVDHDG--TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
+F+VKD+ H+G T LGFWIYLMSDCL+FAV F TY VLG +YA GP P ++FD
Sbjct: 17 PVFHVKDEHA----HEGASTALGFWIYLMSDCLIFAVLFATYGVLGTSYAGGPTPKELFD 72
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ + ++T +LL SS++ FAMLA R +T WL +T FG+ F+ +E++EFAHLI
Sbjct: 73 LKLVALNTSMLLFSSITYGFAMLAMEKGR-TGQTQGWLFITLLFGLAFLGIELFEFAHLI 131
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
A P RSAFLSSFF LVG HGLHV FG +WL L+IQ+ ++GLI N+RRL+CLSMFW
Sbjct: 132 HEGAGPWRSAFLSSFFTLVGTHGLHVTFGSVWLVTLMIQVARRGLIPANRRRLMCLSMFW 191
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD+IWI VF++VYLMG +
Sbjct: 192 HFLDVIWIGVFTYVYLMGAL 211
>gi|319786909|ref|YP_004146384.1| cytochrome o ubiquinol oxidase subunit III [Pseudoxanthomonas
suwonensis 11-1]
gi|317465421|gb|ADV27153.1| cytochrome o ubiquinol oxidase, subunit III [Pseudoxanthomonas
suwonensis 11-1]
Length = 211
Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 150/213 (70%), Gaps = 6/213 (2%)
Query: 1 MSRQKIGKSP---NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK 57
MS + SP + + FY D +GT LGFW+YLMSD L+FA F Y VLG+
Sbjct: 1 MSDAALASSPLAGDPNRFY--DTGGHHHPQNGTLLGFWLYLMSDLLIFACLFAVYGVLGR 58
Query: 58 NYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMI 117
+YAAGP D+FD+ + V+T +LLLSS++ FAML S +R + WL VT FG+
Sbjct: 59 SYAAGPTGADLFDLPLVAVNTAMLLLSSITYGFAML-SMQRRNTAGVLGWLAVTGLFGLA 117
Query: 118 FIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLIS 177
F+ +E+YEF+HLI A PQRSAFLSSFFALVG HGLHV FG++WL VL++Q+ + GL
Sbjct: 118 FLGLELYEFSHLIHEGAGPQRSAFLSSFFALVGTHGLHVAFGIVWLVVLMVQVQRHGLHE 177
Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
N+RRL+CLS+FWHFLD++WI VF+FVYLMGV+
Sbjct: 178 ANRRRLMCLSLFWHFLDVVWIGVFTFVYLMGVL 210
>gi|301631835|ref|XP_002945000.1| PREDICTED: cytochrome o ubiquinol oxidase subunit 3-like [Xenopus
(Silurana) tropicalis]
Length = 214
Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FA F TY VLG++YA GP ++FD+ + ++T LLLSS++
Sbjct: 33 NGTALGFWLYLMSDCLIFAALFATYGVLGRSYAGGPTGAELFDLPLVALNTAFLLLSSIT 92
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML + + T+ WL VT FG+ F+ +E+YEF HLI A PQRSAFLS+FF
Sbjct: 93 FGFAMLQKQQNK-VGGTLVWLAVTGLFGLCFLGLELYEFHHLIHQGAGPQRSAFLSAFFT 151
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LV HGLHV FGL+WL VL++QI ++GLI NQRRL+CLSMFWHFLD++WI VF+FVYLM
Sbjct: 152 LVATHGLHVSFGLVWLVVLMVQIAQRGLIHENQRRLMCLSMFWHFLDVVWIGVFTFVYLM 211
Query: 208 GVV 210
GV+
Sbjct: 212 GVL 214
>gi|221067297|ref|ZP_03543402.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni
KF-1]
gi|264678284|ref|YP_003278191.1| cytochrome C oxidase subunit III [Comamonas testosteroni CNB-2]
gi|299532080|ref|ZP_07045474.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni
S44]
gi|220712320|gb|EED67688.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni
KF-1]
gi|262208797|gb|ACY32895.1| cytochrome c oxidase, subunit III [Comamonas testosteroni CNB-2]
gi|298719742|gb|EFI60705.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni
S44]
Length = 210
Score = 223 bits (569), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FA F TY VLG++YA GP+ D+FD+S + V+T LL+SS++
Sbjct: 29 NGTSLGFWLYLMSDCLIFAALFATYGVLGRSYAGGPSGKDLFDLSLVAVNTAFLLMSSIT 88
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML K+ ++ T+ WL VT G F+ +E+YEF HLI A PQ SAFLSSFF
Sbjct: 89 FGFAML-QKQKKNVNGTLLWLAVTGLLGAAFLAVELYEFHHLIHQGATPQSSAFLSSFFT 147
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HG+HV FGL+WL L+IQI K GLI+ N RR+ CLSMFWHFLD++WI VF+FVYLM
Sbjct: 148 LVGTHGIHVTFGLVWLITLMIQIKKHGLINENVRRINCLSMFWHFLDVVWIGVFTFVYLM 207
Query: 208 GVV 210
GV+
Sbjct: 208 GVL 210
>gi|103486991|ref|YP_616552.1| cytochrome c oxidase, subunit III [Sphingopyxis alaskensis RB2256]
gi|98977068|gb|ABF53219.1| cytochrome c oxidase, subunit III [Sphingopyxis alaskensis RB2256]
Length = 208
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 145/197 (73%), Gaps = 4/197 (2%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
FY D+ H T LGFWIYLMSDCL+FA+ F YAVLG +YAAGPAP D+FD+ I
Sbjct: 14 FYDLDEHPHPEGHS-TMLGFWIYLMSDCLIFAILFACYAVLGGSYAAGPAPKDLFDLKLI 72
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISME 133
++T +LL SS++ FA+L R+ K V WL VT FG+ F+ +E+YEF HLI +
Sbjct: 73 ALNTAMLLFSSITYGFAVLQMQQGRV--KGVQLWLAVTGLFGLAFLGIELYEFHHLIEIG 130
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
A PQRSAFLS+FF LVG HGLHV FG+IWL L++Q+ K GLI+ N+RR++CLSMFWHFL
Sbjct: 131 ATPQRSAFLSAFFTLVGTHGLHVTFGIIWLVTLMVQLSKHGLIAANKRRVMCLSMFWHFL 190
Query: 194 DLIWICVFSFVYLMGVV 210
D++WI VF+FVYL GV+
Sbjct: 191 DVVWIGVFTFVYLTGVL 207
>gi|254419944|ref|ZP_05033668.1| cytochrome o ubiquinol oxidase, subunit III [Brevundimonas sp.
BAL3]
gi|196186121|gb|EDX81097.1| cytochrome o ubiquinol oxidase, subunit III [Brevundimonas sp.
BAL3]
Length = 207
Score = 222 bits (565), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLMSDCL+FA+ F + VLG NYAAGP P ++FD+ + V+T +LL SS++
Sbjct: 27 TMLGFWLYLMSDCLIFAMLFAVFGVLGGNYAAGPGPKELFDLELVAVNTAMLLFSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K +T+ WL +T FG+ F+ +E+YEFAHLI A PQRSAFLS+FF LV
Sbjct: 87 FAMLA-MDKNNRTQTLIWLAITGLFGLAFLGIELYEFAHLIHEGATPQRSAFLSAFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV FG+IWL L++Q+ KGLI N+RRL+CLSMFWHFLD+IWI VF+FVYL+G+
Sbjct: 146 GTHGLHVTFGIIWLVTLMVQVSWKGLIPANKRRLMCLSMFWHFLDVIWIGVFTFVYLLGM 205
Query: 210 V 210
V
Sbjct: 206 V 206
>gi|16126015|ref|NP_420579.1| ubiquinol oxidase subunit III [Caulobacter crescentus CB15]
gi|221234786|ref|YP_002517222.1| quinol cytochrome oxidase polypeptide III [Caulobacter crescentus
NA1000]
gi|13423197|gb|AAK23747.1| ubiquinol oxidase subunit III [Caulobacter crescentus CB15]
gi|220963958|gb|ACL95314.1| quinol cytochrome oxidase polypeptide III [Caulobacter crescentus
NA1000]
Length = 208
Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 148/203 (72%), Gaps = 4/203 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
+ + FY+ + +GT LGFWIYLMSDCL+FAV F YAVLG++YAAGP+ D
Sbjct: 9 SAADTDQFYLTKEHHP---ENGTLLGFWIYLMSDCLIFAVLFACYAVLGQSYAAGPSGAD 65
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+FD+ + ++T +LLLSS++ FAM+A A R + + WL VT G+ F+ +EIYEFA
Sbjct: 66 LFDLKLVAINTGLLLLSSITYGFAMIA-AQAREVRPVLIWLGVTGLLGVGFLSLEIYEFA 124
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI A PQRSAFLS+FF LVG HGLHV FG+IWL L++Q+ ++GL +RRL+CLS
Sbjct: 125 HLIHEGATPQRSAFLSAFFLLVGTHGLHVTFGVIWLVTLMVQVAQRGLGIEMRRRLMCLS 184
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
MFWHFLD+IWI VFSFVYL+GV+
Sbjct: 185 MFWHFLDVIWIGVFSFVYLLGVL 207
>gi|332184930|ref|ZP_08386679.1| cytochrome o ubiquinol oxidase, subunit III [Sphingomonas sp. S17]
gi|332014654|gb|EGI56710.1| cytochrome o ubiquinol oxidase, subunit III [Sphingomonas sp. S17]
Length = 212
Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 149/212 (70%), Gaps = 3/212 (1%)
Query: 1 MSRQKIGKSP--NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKN 58
MS + P N + + V+D+ T +GFW+YLMSDCL+FA+ F TY VLG +
Sbjct: 1 MSTDVLSADPAKNPTYYLVEDEDHHHESGGSTAIGFWMYLMSDCLIFAILFATYGVLGTS 60
Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118
YA GP P ++F++ + ++T +LLLSS++ FAM+A K T+ WL +T FG+ F
Sbjct: 61 YAGGPTPREIFELPLVALNTSMLLLSSITYGFAMIA-MEKNQKSNTLIWLGITGLFGLAF 119
Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178
+ +E+YEFA+LI A PQRSAFLSSFF LVG HGLHV FG IWL L++Q+ + GLI
Sbjct: 120 LSIELYEFANLIHEGAGPQRSAFLSSFFTLVGTHGLHVTFGSIWLVTLMVQVGRFGLIEA 179
Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
N+RRL+CLSMFWHFLD++WI VF+FVYL+GV+
Sbjct: 180 NKRRLMCLSMFWHFLDVVWIGVFTFVYLLGVL 211
>gi|190895345|ref|YP_001985637.1| cytochrome O ubiquinol oxidase protein, subunit III [Rhizobium etli
CIAT 652]
gi|190699290|gb|ACE93374.1| cytochrome O ubiquinol oxidase protein, subunit III [Rhizobium etli
CIAT 652]
Length = 206
Score = 221 bits (562), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
MS + + + +D + T LGFW+YLMSDCL+FAV F T+ VLG+NYA
Sbjct: 1 MSDHTVDTAEKPEFYLTEDHHPE----NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 56
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
AG P D+FD+ + ++T +LL SS++ FAML + +T+ WL VT FG FI
Sbjct: 57 AGRRPADLFDLPIVALNTSMLLFSSITYGFAML-QMERNAKAETLFWLAVTGLFGAAFIG 115
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
+E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+
Sbjct: 116 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 175
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RRL+CLSMFWHFLD++WI VFSFVYL+GVV
Sbjct: 176 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVV 205
>gi|170748151|ref|YP_001754411.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
radiotolerans JCM 2831]
gi|170654673|gb|ACB23728.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium
radiotolerans JCM 2831]
Length = 210
Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+FY D+ E T LGFW+YLMSDCL+FA F TY VLG++YAAGP P ++FD+
Sbjct: 14 PVFYQIDE-EGHHSEGSTMLGFWLYLMSDCLIFATLFATYGVLGRSYAAGPTPKELFDLP 72
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
GI V+T +LL SS++ FAML R + +T WL VT FG F+ +EI EF HL
Sbjct: 73 GIAVNTAMLLFSSITYGFAMLEMDRDR-VKQTQIWLAVTGLFGAAFVALEIREFVHLFHE 131
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A P RSAFLSSF+ LV HGLHV G++WL VL++Q+ K+GLI N+RRL+CLSMFWHF
Sbjct: 132 GAPPWRSAFLSSFYTLVSTHGLHVSMGILWLVVLMVQVGKRGLIVENKRRLMCLSMFWHF 191
Query: 193 LDLIWICVFSFVYLMGVV 210
LDLIWI VF+ VYLMGV+
Sbjct: 192 LDLIWIGVFTVVYLMGVL 209
>gi|124266932|ref|YP_001020936.1| cytochrome ubiquinol oxidase subunit III [Methylibium
petroleiphilum PM1]
gi|124259707|gb|ABM94701.1| cytochrome ubiquinol oxidase subunit III [Methylibium
petroleiphilum PM1]
Length = 215
Score = 220 bits (561), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 141/183 (77%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFW+YLMSDCL+FA F + VLG++YA GP+ ++FD+ + ++T +LLLSS++
Sbjct: 33 NGTLLGFWLYLMSDCLIFACLFAVHGVLGRSYAGGPSGAELFDLKLVAINTSLLLLSSIT 92
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+ +R T+ WL +T FG FI +E+YEFAHLI AVPQRSAFLSSFF
Sbjct: 93 YGFAMI-EMQRRRQGATLLWLAITGLFGAGFIGLELYEFAHLIHEGAVPQRSAFLSSFFT 151
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV FG++WL L++Q+ + GL++ N+RRL+CLSMFWHFLD++WI VF+FVYLM
Sbjct: 152 LVGTHGLHVSFGVVWLVTLMVQVGRHGLVAENRRRLMCLSMFWHFLDVVWIGVFTFVYLM 211
Query: 208 GVV 210
GV+
Sbjct: 212 GVL 214
>gi|300311777|ref|YP_003775869.1| cytochrome o ubiquinol oxidase subunit III protein [Herbaspirillum
seropedicae SmR1]
gi|300074562|gb|ADJ63961.1| cytochrome o ubiquinol oxidase subunit III protein [Herbaspirillum
seropedicae SmR1]
Length = 208
Score = 220 bits (561), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 140/198 (70%), Gaps = 5/198 (2%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
S ++V+ +GT LGFWIYLMSDCL+FA F YAVLG+NYA GP ++FD+
Sbjct: 15 SRYFVRHHHPE----NGTLLGFWIYLMSDCLIFACLFACYAVLGRNYAGGPTGAELFDLP 70
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ ++T +LLLSS++ FAMLA K+ T+ WL++T G FI E+YEF HLI
Sbjct: 71 LVALNTALLLLSSITYGFAMLAMQAKKQ-QNTIFWLIITGLLGAGFIYFELYEFLHLIHE 129
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A P RS FL+SFFALVG HGLHV FG+IWL VL+ QI K GL N RRL+CLSMFWHF
Sbjct: 130 GAGPTRSGFLTSFFALVGTHGLHVTFGIIWLVVLLFQINKHGLTEANGRRLMCLSMFWHF 189
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++WI VF+FVYLMGV+
Sbjct: 190 LDVVWIGVFTFVYLMGVL 207
>gi|94314529|ref|YP_587738.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus
metallidurans CH34]
gi|93358381|gb|ABF12469.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus
metallidurans CH34]
Length = 218
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 142/201 (70%), Gaps = 4/201 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
P FY+ ++ +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP+ +
Sbjct: 19 APPGGYQFYLTEEVHP---QNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPSGAE 75
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+F++ + ++T LL+SS++ FAML R + T WL +T FG F+ +E+YEFA
Sbjct: 76 LFELPLVALNTSFLLISSITYGFAMLQMQQNR-VASTQIWLAITGVFGAAFLTVELYEFA 134
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI A PQRSAFL+SFF+LVG HGLHV FG+IWL VL+ Q+ + GLI+ N+RRL+CLS
Sbjct: 135 HLIHEGAGPQRSAFLTSFFSLVGTHGLHVTFGIIWLIVLMTQVARHGLITANKRRLMCLS 194
Query: 188 MFWHFLDLIWICVFSFVYLMG 208
MFWHFLD++WI VF+FVYLMG
Sbjct: 195 MFWHFLDVVWIGVFTFVYLMG 215
>gi|317403927|gb|EFV84396.1| cytochrome ubiquinol oxidase subunit III [Achromobacter
xylosoxidans C54]
Length = 213
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 145/203 (71%), Gaps = 4/203 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
P +F+V + +GT LGFW+YLMSDCL+FA F TY VLG+NYAAGP+ D
Sbjct: 14 APPAEPVFHVAGEHHP---KNGTLLGFWVYLMSDCLIFACLFATYGVLGRNYAAGPSGAD 70
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+FD+ + V+T +LLLSS++ FAML R + T WL VT G+ F+ +E+YEFA
Sbjct: 71 LFDLPLVAVNTSLLLLSSITYGFAMLEMRRNR-VGATQGWLAVTGLLGLGFLSLELYEFA 129
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI A PQRSAFLSSFF LVG HGLHV FG++WL +++Q+ GLI N+RRL+CLS
Sbjct: 130 HLIHQGAGPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTMMVQVRMHGLIPENRRRLMCLS 189
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
MFWHFLDLIW+ VF+FVYLMGV+
Sbjct: 190 MFWHFLDLIWVGVFTFVYLMGVL 212
>gi|116694972|ref|YP_729183.1| bo3-type chinol oxidase, subunit III [Ralstonia eutropha H16]
gi|113529471|emb|CAJ95818.1| bo3-type chinol oxidase, subunit III [Ralstonia eutropha H16]
Length = 218
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 142/203 (69%), Gaps = 4/203 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
P FY+ + +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP+ +
Sbjct: 19 APPGGYQFYLPEDHHP---QNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPSGAE 75
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+F++ + ++T LLLSS++ FAML R I T WL +T FG F+ +E+YEFA
Sbjct: 76 LFELPLVALNTSFLLLSSITYGFAMLQMQQNR-IAGTQIWLAITGVFGAGFLAVELYEFA 134
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI+ A PQRSAFL+SFFALVG HGLHV G+IWL VL+ Q+ + GLI+ N+RRL+CLS
Sbjct: 135 HLINEGAGPQRSAFLTSFFALVGTHGLHVTCGIIWLVVLMTQVAQHGLITANKRRLMCLS 194
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
MFWHFLD++WI VF+FVYLMG +
Sbjct: 195 MFWHFLDVVWIGVFTFVYLMGAL 217
>gi|33593693|ref|NP_881337.1| cytochrome ubiquinol oxidase subunit III [Bordetella pertussis
Tohama I]
gi|33563766|emb|CAE43006.1| cytochrome ubiquinol oxidase subunit III [Bordetella pertussis
Tohama I]
gi|332383097|gb|AEE67944.1| cytochrome ubiquinol oxidase subunit III [Bordetella pertussis CS]
Length = 213
Score = 217 bits (553), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 143/197 (72%), Gaps = 4/197 (2%)
Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
LFYV + +GT LGFW+YLMSDCL+FA F TY V+G+NY GP ++FD+
Sbjct: 20 LFYVPGEHHP---KNGTLLGFWVYLMSDCLVFACLFATYGVVGRNYDGGPTGAELFDLPL 76
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ V+T +LLLSS++ FAML +R I T +WL VT G F+ +E+YEFAHLI
Sbjct: 77 VAVNTSLLLLSSITYGFAMLEMRRQR-IGATQAWLAVTGLLGAGFLGLELYEFAHLIHQG 135
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
A PQRSAFLS+FF LVG HGLHV FG++WL L++Q+ + GLI N+RRL+CLSMFWHFL
Sbjct: 136 AGPQRSAFLSAFFTLVGTHGLHVTFGIVWLVTLMVQVARHGLIPENRRRLMCLSMFWHFL 195
Query: 194 DLIWICVFSFVYLMGVV 210
DLIW+ VF+FVYLMGV+
Sbjct: 196 DLIWVGVFTFVYLMGVL 212
>gi|114767473|ref|ZP_01446256.1| Cytochrome c oxidase, subunit III [Pelagibaca bermudensis HTCC2601]
gi|114540453|gb|EAU43535.1| Cytochrome c oxidase, subunit III [Roseovarius sp. HTCC2601]
Length = 219
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 135/204 (66%), Gaps = 1/204 (0%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
+ + P K +++ T +GFWIYLMSDC++F F TYAVLG NYA GP
Sbjct: 14 EPLADRPMHHAREAKPHEDAHAHSSPTPVGFWIYLMSDCVIFGALFATYAVLGGNYAGGP 73
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
AP D+F+ I V T +LL SS++ AML A K + T+ WL VTA FG FI MEI
Sbjct: 74 APKDLFEPGFIAVETALLLFSSVTFGLAML-RAGKSDTNGTLMWLAVTALFGAGFIGMEI 132
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEF HLI + A P RSAFLSSFFALVG HGLHV GLIWL L++QI GLI N +RL
Sbjct: 133 YEFNHLIHLGAGPDRSAFLSSFFALVGTHGLHVTGGLIWLITLMVQIRMHGLIGPNMQRL 192
Query: 184 ICLSMFWHFLDLIWICVFSFVYLM 207
LSMFWHFLDL+WI VFSFVYL+
Sbjct: 193 GTLSMFWHFLDLVWIGVFSFVYLV 216
>gi|33600294|ref|NP_887854.1| cytochrome ubiquinol oxidase subunit III [Bordetella bronchiseptica
RB50]
gi|33567893|emb|CAE31806.1| cytochrome ubiquinol oxidase subunit III [Bordetella bronchiseptica
RB50]
Length = 212
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 143/197 (72%), Gaps = 4/197 (2%)
Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
LFYV + +GT LGFW+YLMSDCL+FA F TY V+G+NY GP ++FD+
Sbjct: 19 LFYVPGEHHP---KNGTLLGFWVYLMSDCLVFACLFATYGVVGRNYDGGPTGAELFDLPL 75
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ V+T +LLLSS++ FAML +R I T +WL VT G F+ +E+YEFAHLI
Sbjct: 76 VAVNTSLLLLSSITYGFAMLEMRRQR-IGATQAWLAVTGLLGAGFLGLELYEFAHLIHQG 134
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
A PQRSAFLS+FF LVG HGLHV FG++WL L++Q+ + GLI N+RRL+CLSMFWHFL
Sbjct: 135 AGPQRSAFLSAFFTLVGTHGLHVTFGIVWLVTLMVQVSRHGLIPENRRRLMCLSMFWHFL 194
Query: 194 DLIWICVFSFVYLMGVV 210
DLIW+ VF+FVYLMGV+
Sbjct: 195 DLIWVGVFTFVYLMGVL 211
>gi|326389122|ref|ZP_08210702.1| cytochrome c oxidase, subunit III [Novosphingobium nitrogenifigens
DSM 19370]
gi|326206353|gb|EGD57190.1| cytochrome c oxidase, subunit III [Novosphingobium nitrogenifigens
DSM 19370]
Length = 212
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75
Y + + T LGFWIYLMSD L+FA+ F +AVLG NYAAGP P D+F++ +
Sbjct: 18 YYDLNEHDHPEGGSTQLGFWIYLMSDLLIFAMLFAAFAVLGGNYAAGPGPKDLFELPLVA 77
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
+T +LL SS++ FAM+ R + WL+VTA FG F+ +E+YEF++LI A
Sbjct: 78 FNTSMLLFSSITYGFAMIEMQKGR-VGGVQFWLVVTALFGATFLGVELYEFSNLIHEGAT 136
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
PQRSAFLS+FF LVG HGLHV FGLIWL VL++Q+ ++GL N+RRL+CLSMFWHFLD+
Sbjct: 137 PQRSAFLSAFFTLVGTHGLHVTFGLIWLGVLLVQLSQRGLEEANKRRLLCLSMFWHFLDV 196
Query: 196 IWICVFSFVYLMGVV 210
+W+ VF+FVYLMGV+
Sbjct: 197 VWVGVFTFVYLMGVL 211
>gi|114707978|ref|ZP_01440870.1| Cytochrome c oxidase, subunit III [Fulvimarina pelagi HTCC2506]
gi|114536607|gb|EAU39739.1| Cytochrome c oxidase, subunit III [Fulvimarina pelagi HTCC2506]
Length = 208
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 140/203 (68%), Gaps = 3/203 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
+P S F + + T LGFWIYLMSDCL+FAV F TY VLG NYAAGP P D
Sbjct: 9 NAPPESFFELNEHGHET--GSSTMLGFWIYLMSDCLIFAVLFATYGVLGANYAAGPRPED 66
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+F++ + V+T +LL SS++ FAM+A R + WL VT FG +F+ +E+YEF
Sbjct: 67 IFELPLLAVNTAMLLFSSITYGFAMIA-MQARQTKMVLLWLAVTGVFGALFLGIELYEFG 125
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
I A PQRS FLS+FF LVG HGLHV FG++WL L++QI K GLIS N+RR++CLS
Sbjct: 126 VFIGEGASPQRSGFLSAFFTLVGTHGLHVTFGIVWLVTLMVQIQKYGLISANRRRIMCLS 185
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
MFWHFLD++WI VF+FVYL+ ++
Sbjct: 186 MFWHFLDVVWIGVFTFVYLIRMI 208
>gi|295691074|ref|YP_003594767.1| cytochrome o ubiquinol oxidase subunit III [Caulobacter segnis ATCC
21756]
gi|295432977|gb|ADG12149.1| cytochrome o ubiquinol oxidase, subunit III [Caulobacter segnis
ATCC 21756]
Length = 208
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 149/196 (76%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDH---DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
KD+ +H +GT LGFWIYLMSDCL+FAV F YAVLG+NYAAGP+ D+FD+ +
Sbjct: 13 KDRFYMTKEHHPENGTLLGFWIYLMSDCLIFAVLFACYAVLGRNYAAGPSGADLFDLPLV 72
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V+T +LLLSS++ FAM+++ K+ + ++WL VT G+ F+ +E+YEF HLI A
Sbjct: 73 AVNTALLLLSSITYGFAMISAQAKK-VKPVLAWLAVTGLLGLGFLSLELYEFHHLIHEGA 131
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
PQRSAFLSSFF LVG HGLHV FG+IWL L++Q+ ++GL + +RRL+CLSMFWHFLD
Sbjct: 132 GPQRSAFLSSFFVLVGTHGLHVTFGVIWLVTLMVQVAQRGLGAEMKRRLMCLSMFWHFLD 191
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VFSFVYL+GV+
Sbjct: 192 VIWIGVFSFVYLLGVL 207
>gi|241663144|ref|YP_002981504.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii
12D]
gi|309781938|ref|ZP_07676669.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia sp.
5_7_47FAA]
gi|240865171|gb|ACS62832.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii
12D]
gi|308919282|gb|EFP64948.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia sp.
5_7_47FAA]
Length = 221
Score = 214 bits (546), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
Query: 9 SPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
P F+V ++ +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP ++
Sbjct: 23 PPGGYQFHVTEEPHVP---NGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPTGAEL 79
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
F++ + ++T LLLSS++ FAML ++ + WL +T FG F+ +E+YEFAH
Sbjct: 80 FELPLVALNTSFLLLSSITYGFAMLQLQQNKISAMQI-WLAITWVFGAAFLAVELYEFAH 138
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI A P RSAFL+SFF+LVG HGLHV FGLIWL VL++Q+ K GLI+ N+RRL+CLSM
Sbjct: 139 LIHEGAGPTRSAFLTSFFSLVGTHGLHVTFGLIWLIVLMVQVSKHGLITANKRRLMCLSM 198
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD++WI VF+FVYLMG +
Sbjct: 199 FWHFLDVVWIGVFTFVYLMGTL 220
>gi|187928956|ref|YP_001899443.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii
12J]
gi|187725846|gb|ACD27011.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii
12J]
Length = 221
Score = 214 bits (545), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
Query: 9 SPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
P F+V ++ +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP ++
Sbjct: 23 PPGGYQFHVTEEPHVP---NGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPTGAEL 79
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
F++ + ++T LLLSS++ FAML ++ + WL +T FG F+ +E+YEFAH
Sbjct: 80 FELPLVALNTSFLLLSSITYGFAMLQLQQNKVSAMQI-WLAITWVFGAAFLAVELYEFAH 138
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI A P RSAFL+SFF+LVG HGLHV FGLIWL VL++Q+ K GLI+ N+RRL+CLSM
Sbjct: 139 LIHEGAGPTRSAFLTSFFSLVGTHGLHVTFGLIWLIVLMVQVSKHGLITANKRRLMCLSM 198
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD++WI VF+FVYLMG +
Sbjct: 199 FWHFLDVVWIGVFTFVYLMGTL 220
>gi|329915609|ref|ZP_08276293.1| Cytochrome O ubiquinol oxidase subunit III [Oxalobacteraceae
bacterium IMCC9480]
gi|327544870|gb|EGF30240.1| Cytochrome O ubiquinol oxidase subunit III [Oxalobacteraceae
bacterium IMCC9480]
Length = 202
Score = 214 bits (544), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 141/203 (69%), Gaps = 5/203 (2%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
+ + + +YV + +GT LGFW+YLMSDCL+FA F YAVLG+NYA GP +
Sbjct: 4 PTTDSTRYYVLEHHPE----NGTTLGFWLYLMSDCLVFAALFAVYAVLGRNYAGGPTGAE 59
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+FD+ + ++T LL+SS++ FAML KR + T+ W+ +T G FI +E+YEF
Sbjct: 60 LFDLPLVALNTAFLLVSSITYGFAMLEMQRKR-VRSTLIWMGITGLIGACFIGLEMYEFI 118
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI A PQRS FL++FF LVG HGLHV FG+IWL L++Q+ GL + N RRL+CLS
Sbjct: 119 HLIHEGAGPQRSGFLTAFFTLVGTHGLHVMFGIIWLVTLMLQVSVHGLTTENSRRLMCLS 178
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
MFWHFLD++WI VF+FVYLMGV+
Sbjct: 179 MFWHFLDVVWIGVFTFVYLMGVL 201
>gi|134095868|ref|YP_001100943.1| cytochrome o ubiquinol oxidase subunit III [Herminiimonas
arsenicoxydans]
gi|133739771|emb|CAL62822.1| Cytochrome o ubiquinol oxidase subunit 3 (Cytochrome o ubiquinol
oxidase subunit III) [Herminiimonas arsenicoxydans]
Length = 214
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 139/196 (70%), Gaps = 5/196 (2%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
+YVK+ T LGFWIYLMSDCL+FA F TYAVLG++YA GP ++FD+ +
Sbjct: 23 YYVKEHHPE----SSTSLGFWIYLMSDCLIFACLFATYAVLGRSYAGGPTGAELFDLPLV 78
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
++T LL+SS++ AML + R + T+ WL +T G F+ +E+YEF HLI A
Sbjct: 79 AMNTAFLLVSSITYGVAMLEAHRNR-VRSTLIWLAITGMLGAGFLALELYEFNHLIHEGA 137
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
PQ SAFL+SFFALVG HGLHV FG+IWL VL+ Q+ K GL N+RRL+CLSMFWHFLD
Sbjct: 138 GPQTSAFLTSFFALVGTHGLHVTFGIIWLIVLMFQVGKFGLNVENKRRLMCLSMFWHFLD 197
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+FVYLMGV+
Sbjct: 198 VIWIGVFTFVYLMGVL 213
>gi|170743801|ref|YP_001772456.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium sp.
4-46]
gi|168198075|gb|ACA20022.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium sp.
4-46]
Length = 208
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +E GT LGFW+YLM DCL+FAV F T+ VLG+NYAAGP+ D+FD+ + ++T
Sbjct: 17 ETEEHAHGDGGTLLGFWVYLMGDCLIFAVLFATFGVLGRNYAAGPSGADLFDLRLVALNT 76
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
+LLLSS++ FAML RL T WL++T FG F+++E+YEF HLI A PQR
Sbjct: 77 SLLLLSSITYGFAMLEMDKDRL-DMTRRWLIITGLFGAGFLMIELYEFGHLIHEGATPQR 135
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAFLS+FF LVG HGLHV FG++WL L+ Q+ + GL++ +R L+CLSMFWHFLD++WI
Sbjct: 136 SAFLSAFFTLVGTHGLHVTFGIVWLLTLLAQLRRYGLVAETRRGLLCLSMFWHFLDVVWI 195
Query: 199 CVFSFVYLMGVV 210
VF+FVYLMG +
Sbjct: 196 GVFTFVYLMGAM 207
>gi|260426790|ref|ZP_05780769.1| cytOchrome o ubiquinol oxidase, subunit III [Citreicella sp. SE45]
gi|260421282|gb|EEX14533.1| cytOchrome o ubiquinol oxidase, subunit III [Citreicella sp. SE45]
Length = 219
Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 130/193 (67%), Gaps = 7/193 (3%)
Query: 21 KESCVDHDG------TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
+ + HD T +GFWIYLMSDC++F F TYAVLG NYA GPAP D+F+ +
Sbjct: 25 RNNDAHHDAHAHSSPTPIGFWIYLMSDCIIFGALFATYAVLGGNYAGGPAPKDLFEPGFV 84
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
+ T +LL SS++ AML A K + WL VTA FG FI MEIYEF HLI + A
Sbjct: 85 AIETALLLFSSITFGLAML-RADKDDRDGVLKWLAVTAVFGAGFIAMEIYEFNHLIHIGA 143
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RSAFLSSFFALVG HGLHV GLIWL L++QI GLI N RRL LSMFWHFLD
Sbjct: 144 GPDRSAFLSSFFALVGTHGLHVTGGLIWLVTLMVQIRMHGLIGENMRRLGTLSMFWHFLD 203
Query: 195 LIWICVFSFVYLM 207
L+WI VFSFVYL+
Sbjct: 204 LVWIGVFSFVYLV 216
>gi|329890317|ref|ZP_08268660.1| cytochrome o ubiquinol oxidase, subunit III [Brevundimonas diminuta
ATCC 11568]
gi|328845618|gb|EGF95182.1| cytochrome o ubiquinol oxidase, subunit III [Brevundimonas diminuta
ATCC 11568]
Length = 172
Score = 210 bits (535), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDCL+FA+ F YAVLG NYAAGPAP D+FD+ + V+T +LL SS++ FAMLA
Sbjct: 1 MSDCLIFAILFAVYAVLGGNYAAGPAPKDLFDLPLVAVNTSMLLFSSITYGFAMLAMYRN 60
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + +T WL VT FG+ F+ +E+YEFAH+I + A PQRS FLS+FF LVG HGLHV F
Sbjct: 61 K-VAQTQVWLAVTGLFGLCFLGIELYEFAHMIHLGATPQRSGFLSAFFILVGTHGLHVTF 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+IWL L+IQ+ +KGLI N+RRL+CLS+FWHFLD+IWI VF+FVYL G++
Sbjct: 120 GVIWLVTLMIQVGQKGLIQANKRRLMCLSLFWHFLDVIWIGVFTFVYLFGML 171
>gi|73538717|ref|YP_299084.1| cytochrome ubiquinol oxidase subunit III [Ralstonia eutropha
JMP134]
gi|72122054|gb|AAZ64240.1| cytochrome ubiquinol oxidase subunit III [Ralstonia eutropha
JMP134]
Length = 229
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 131/183 (71%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+GT LGFWIYLMSDCL+FA F Y VLG++YA GP ++FD+ + ++T LLLSS++
Sbjct: 47 NGTLLGFWIYLMSDCLIFACLFAAYGVLGRSYAGGPTGAELFDLPLVALNTSFLLLSSIT 106
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAML R + T WL +T G F+ +EIYEF HL+ A P RS FL+SFF+
Sbjct: 107 YGFAMLQMQQGR-VGGTQGWLAITGVLGACFLGVEIYEFVHLVGEGAGPWRSGFLTSFFS 165
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LV HGLHV FG+IWL L++Q+ GLI N+RRL+CLSMFWHFLD++WI VF+FVYLM
Sbjct: 166 LVSTHGLHVTFGIIWLITLMVQVRLHGLIPENRRRLMCLSMFWHFLDVVWIGVFTFVYLM 225
Query: 208 GVV 210
GV+
Sbjct: 226 GVL 228
>gi|99082126|ref|YP_614280.1| cytochrome c oxidase, subunit III [Ruegeria sp. TM1040]
gi|99038406|gb|ABF65018.1| cytochrome c oxidase subunit III [Ruegeria sp. TM1040]
Length = 214
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 140/214 (65%), Gaps = 5/214 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDH----DGTYLGFWIYLMSDCLMFAVFFVTYAVLG 56
MS +P FYV + + GT LGFWIYLMSDCL+F + F +AV+G
Sbjct: 1 MSHSAATPAPEALEFYVTEDPHAGHGDHHHDTGTMLGFWIYLMSDCLIFGILFAVHAVVG 60
Query: 57 KNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGM 116
+YAAGP+P D+F+I I ++T LL SS++ FA++ + +R + WL VT FG+
Sbjct: 61 TSYAAGPSPADLFEIDKILLATFFLLFSSITYGFAVI-NMQQRKQRAMMLWLGVTLVFGL 119
Query: 117 IFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLI 176
F++MEI EF HL + A P SAFLSSF+ LVG HGLHV G IWL VL++Q+ GL
Sbjct: 120 GFLVMEILEFQHLWHLGAGPGASAFLSSFWVLVGTHGLHVTAGAIWLVVLLVQVQMHGLT 179
Query: 177 SGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
N RR++CLSMFWHFLDLIWI VFSFVYL GV+
Sbjct: 180 EANTRRILCLSMFWHFLDLIWIGVFSFVYLTGVL 213
>gi|237808829|ref|YP_002893269.1| cytochrome o ubiquinol oxidase, subunit III [Tolumonas auensis DSM
9187]
gi|237501090|gb|ACQ93683.1| cytochrome o ubiquinol oxidase, subunit III [Tolumonas auensis DSM
9187]
Length = 204
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL ++A GP D+F++ + T LL+SS + AM
Sbjct: 28 GFWIYLMSDCILFATLFATYAVLSGSFAGGPTGKDIFELPYVLTETFCLLISSFTYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + WL VT FFG FI MEI EF+HLIS P RSAFLS FFAL+G H
Sbjct: 88 LA-MNRGEQSSVMKWLAVTFFFGAAFIGMEINEFSHLISEGYGPDRSAFLSGFFALIGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHVF GL+W+ VL+IQ+ + GL + NQ RL+CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 147 GLHVFSGLVWMIVLMIQVAQNGLTTTNQTRLMCLSLFWHFLDIVWICVFTVVYLMGVL 204
>gi|254428757|ref|ZP_05042464.1| cytochrome o ubiquinol oxidase, subunit III [Alcanivorax sp. DG881]
gi|196194926|gb|EDX89885.1| cytochrome o ubiquinol oxidase, subunit III [Alcanivorax sp. DG881]
Length = 212
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 141/188 (75%), Gaps = 4/188 (2%)
Query: 26 DH---DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82
DH +GT LGFWIYLMSDCL+FA F TY VLG++YA GP +++FD+S I ++T +LL
Sbjct: 25 DHHPQNGTLLGFWIYLMSDCLIFAALFATYGVLGRSYAGGPTGMELFDLSLIAINTSLLL 84
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
+SS++ FAML + + T+ WL VT G+ F+ +E+YEF HLIS+ A PQ S F
Sbjct: 85 VSSITYGFAMLHMQANK-VKGTMFWLAVTGLLGLGFLSLELYEFHHLISVGAGPQTSGFW 143
Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
++FFALVG HGLHVFFG++WL L+ Q+ K GLI N+RR+ CLSMFWHFLD++W+ VF+
Sbjct: 144 TAFFALVGTHGLHVFFGIVWLVTLLFQLKKHGLIPENKRRVFCLSMFWHFLDVVWVGVFT 203
Query: 203 FVYLMGVV 210
+VYLMGV+
Sbjct: 204 YVYLMGVL 211
>gi|254252016|ref|ZP_04945334.1| cytochrome c oxidase subunit III [Burkholderia dolosa AUO158]
gi|124894625|gb|EAY68505.1| cytochrome c oxidase subunit III [Burkholderia dolosa AUO158]
Length = 202
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EFAHLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYRQRR-GALLAWLAVTFVLGAAFLAMELREFAHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQI-LKKG-LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI L+ G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTVGLLWMIVLAAQIVLRSGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|172061020|ref|YP_001808672.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia ambifaria
MC40-6]
gi|171993537|gb|ACB64456.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria
MC40-6]
Length = 202
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYKQRR-GALLAWLAVTFALGAAFLAMELREFSHLIAD 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVLRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|171318687|ref|ZP_02907831.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria
MEX-5]
gi|171096122|gb|EDT41047.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria
MEX-5]
Length = 202
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYKQRR-GALLAWLAVTFVLGAAFLAMELREFSHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVLRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|78066843|ref|YP_369612.1| Heme/copper-type cytochrome/quinol oxidase subunit 3-like
[Burkholderia sp. 383]
gi|77967588|gb|ABB08968.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia sp. 383]
Length = 202
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 138/200 (69%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG+ +A GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F++ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYKQRR-GALLAWLAVTFVLGAAFLVMELREFSHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVFRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|161524384|ref|YP_001579396.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
multivorans ATCC 17616]
gi|189350861|ref|YP_001946489.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
multivorans ATCC 17616]
gi|160341813|gb|ABX14899.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
multivorans ATCC 17616]
gi|189334883|dbj|BAG43953.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
multivorans ATCC 17616]
Length = 202
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ + T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAIETAALLLSSITYGFAMLAAYKQRR-GALLAWLAVTFVLGAAFLAMELREFSHLIAG 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVARGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVF+FVYL V+
Sbjct: 183 HFLDIVWICVFTFVYLASVI 202
>gi|221198371|ref|ZP_03571417.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2M]
gi|221208952|ref|ZP_03581949.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2]
gi|221215751|ref|ZP_03588711.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD1]
gi|221164363|gb|EED96849.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD1]
gi|221171235|gb|EEE03685.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2]
gi|221182303|gb|EEE14704.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2M]
Length = 202
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 135/200 (67%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ + T LLLSS++ FAMLA+ +R + WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAIETAALLLSSITYGFAMLAAYKQRR-GALLGWLAVTFVLGAAFLAMELREFSHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVARGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVF+FVYL V+
Sbjct: 183 HFLDIVWICVFTFVYLASVI 202
>gi|115352156|ref|YP_773995.1| cytochrome c oxidase subunit III [Burkholderia ambifaria AMMD]
gi|115282144|gb|ABI87661.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia ambifaria
AMMD]
Length = 202
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQHAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYKQRR-GALLAWLAVTFVLGAAFLAMELREFSHLIAD 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVMRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|110834896|ref|YP_693755.1| cytochrome o ubiquinol oxidase subunit III [Alcanivorax borkumensis
SK2]
gi|110648007|emb|CAL17483.1| cytochrome o ubiquinol oxidase, subunit III [Alcanivorax
borkumensis SK2]
Length = 222
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 139/188 (73%), Gaps = 4/188 (2%)
Query: 26 DH---DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82
DH +GT LGFWIYLMSDCL+FA F TY VL ++YA GP +++FD+S I V+T +LL
Sbjct: 35 DHHPQNGTLLGFWIYLMSDCLIFACLFATYGVLSRSYAGGPTGMELFDLSLIAVNTSLLL 94
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
+SS++ FAML R + T+ WL VT G+ F+ +E+YEF HLI + A PQ S F
Sbjct: 95 VSSITYGFAMLQMQANR-VKGTMFWLAVTGLLGLGFLSLELYEFHHLIHVGAGPQTSGFW 153
Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
++FFALVG HGLHVFFG++WL L+ Q+ K GLI N+RR+ CLSMFWHFLD++W+ VF+
Sbjct: 154 TAFFALVGTHGLHVFFGIVWLVTLLFQLKKHGLIQENKRRVFCLSMFWHFLDVVWVGVFT 213
Query: 203 FVYLMGVV 210
+VYLMGV+
Sbjct: 214 YVYLMGVL 221
>gi|28198531|ref|NP_778845.1| cytochrome O ubiquinol oxidase subunit III [Xylella fastidiosa
Temecula1]
gi|71897569|ref|ZP_00679814.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1]
gi|182681210|ref|YP_001829370.1| cytochrome o ubiquinol oxidase, subunit III [Xylella fastidiosa
M23]
gi|28056615|gb|AAO28494.1| cytochrome O ubiquinol oxidase subunit III [Xylella fastidiosa
Temecula1]
gi|71732472|gb|EAO34525.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1]
gi|182631320|gb|ACB92096.1| cytochrome o ubiquinol oxidase, subunit III [Xylella fastidiosa
M23]
Length = 202
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSL+
Sbjct: 21 DNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVLVETFLLLFSSLT 80
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+A A KR I WL+VTA FG+ F+ ME+YEF HLI A P RSAFLS+FF
Sbjct: 81 FGFAMIA-AHKRHIPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAGPGRSAFLSAFFT 139
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFLD+IWI VF+ VYL+
Sbjct: 140 LVGTHGLHVASGLLWMLILVIQIVKNGLTPRNSTRLACLSLFWHFLDVIWIGVFTIVYLL 199
Query: 208 GVV 210
G +
Sbjct: 200 GAL 202
>gi|15837989|ref|NP_298677.1| cytochrome O ubiquinol oxidase, subunit III [Xylella fastidiosa
9a5c]
gi|9106396|gb|AAF84197.1|AE003970_4 cytochrome O ubiquinol oxidase, subunit III [Xylella fastidiosa
9a5c]
Length = 202
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + + T +LL SSL+
Sbjct: 21 DNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVLIETFLLLFSSLT 80
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+A A KR I WL+VTA FG+ F+ ME+YEF HLI A P RSAFLS+FF
Sbjct: 81 FGFAMIA-AHKRHIPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAGPGRSAFLSAFFT 139
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFLD+IWI VF+ VYL+
Sbjct: 140 LVGTHGLHVASGLLWMLILVIQIVKNGLTPRNNTRLACLSLFWHFLDVIWIGVFTIVYLL 199
Query: 208 GVV 210
G +
Sbjct: 200 GAL 202
>gi|76809447|ref|YP_334219.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei 1710b]
gi|167825087|ref|ZP_02456558.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei 9]
gi|167911808|ref|ZP_02498899.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei 112]
gi|226199985|ref|ZP_03795535.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pakistan
9]
gi|254195719|ref|ZP_04902145.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei S13]
gi|254262091|ref|ZP_04953145.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710a]
gi|254296928|ref|ZP_04964381.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 406e]
gi|76578900|gb|ABA48375.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei 1710b]
gi|157807037|gb|EDO84207.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 406e]
gi|169652464|gb|EDS85157.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei S13]
gi|225928041|gb|EEH24078.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pakistan
9]
gi|254220780|gb|EET10164.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710a]
Length = 201
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 131/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ LGFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVLGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A +R WL VT G F+ ME+ EF+HL++ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVGTHGLHVTAGLVWMAVLVAQALRRPELTERDIRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|307579656|gb|ADN63625.1| cytochrome O ubiquinol oxidase subunit III [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 194
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSL+
Sbjct: 13 DNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVLVETFLLLFSSLT 72
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+A A KR I WL+VTA FG+ F+ ME+YEF HLI A P RSAFLS+FF
Sbjct: 73 FGFAMIA-AHKRHIPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAGPGRSAFLSAFFT 131
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFLD+IWI VF+ VYL+
Sbjct: 132 LVGTHGLHVASGLLWMLILVIQIVKNGLTPRNSTRLACLSLFWHFLDVIWIGVFTIVYLL 191
Query: 208 GVV 210
G +
Sbjct: 192 GAL 194
>gi|170701548|ref|ZP_02892498.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria
IOP40-10]
gi|170133542|gb|EDT01920.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria
IOP40-10]
Length = 202
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQHAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYKQRR-GALLAWLAVTFVLGAAFLAMELREFSHLIAD 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVLRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|167589185|ref|ZP_02381573.1| cytochrome c oxidase, subunit III [Burkholderia ubonensis Bu]
Length = 204
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 131/191 (68%), Gaps = 8/191 (4%)
Query: 26 DHDG----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVL 81
DHD + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G+ V T L
Sbjct: 16 DHDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPGVAVETAAL 75
Query: 82 LLSSLSCSFAML-ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
LLSS++ FAML A KR + T+ WL VT G F+ ME+ EFAHLI+ A PQRSA
Sbjct: 76 LLSSITYGFAMLGAHRGKRGV--TLVWLAVTFVLGAAFLAMELREFAHLIAEGAGPQRSA 133
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQI-LKKGLISGNQRRLICLSMFWHFLDLIWIC 199
FLS+FF LVG HGLHV GL+W+ VL Q+ + L + RRL CLS+FWHFLD++WIC
Sbjct: 134 FLSAFFTLVGTHGLHVSAGLVWMIVLAAQVAFGRELTERDIRRLTCLSLFWHFLDIVWIC 193
Query: 200 VFSFVYLMGVV 210
VFSFVYL V+
Sbjct: 194 VFSFVYLASVI 204
>gi|77361152|ref|YP_340727.1| cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain
C) [Pseudoalteromonas haloplanktis TAC125]
gi|76876063|emb|CAI87285.1| cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain
C) [Pseudoalteromonas haloplanktis TAC125]
Length = 215
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 11 NFSLFYVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
N ++ K ++ HD T GFW+YLM+DCL+FA FF TYAVL N A G + D
Sbjct: 14 NSAIVNTKQDHDAHAHHDTSSNTTFGFWLYLMTDCLLFASFFATYAVLFMNTAGGVSGKD 73
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+F++ + V T LL+SS++ FAM+A+ ++ T+ WL VT G++FI ME+YEF
Sbjct: 74 IFELDFVAVETAALLISSITFGFAMIAAQGQKKA-LTLIWLAVTFCLGVVFISMEVYEFN 132
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
HLI PQ+SAFL+SFFALVGLHGLHV GLIW+ V++I++ K+GL RL CLS
Sbjct: 133 HLIVHGNGPQKSAFLTSFFALVGLHGLHVTAGLIWMSVMMIEVAKRGLGKATVTRLSCLS 192
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
+FWHFLD++WICVF+ VYLMG +
Sbjct: 193 LFWHFLDIVWICVFTLVYLMGAM 215
>gi|167563462|ref|ZP_02356378.1| ubiquinol oxidase, subunit III [Burkholderia oklahomensis EO147]
gi|167570630|ref|ZP_02363504.1| ubiquinol oxidase, subunit III [Burkholderia oklahomensis C6786]
Length = 201
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCIVFAALFATFAVLGNQFAGGPTGKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A KR WL VT G F+ ME+ EF+HLI+ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHKRRRGAVFGWLAVTFVLGAAFLAMELREFSHLIAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VL +Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVGTHGLHVTAGLVWMVVLALQALRRPELTERDVRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|163857710|ref|YP_001632008.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii DSM
12804]
gi|163261438|emb|CAP43740.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii]
Length = 208
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 141/196 (71%), Gaps = 4/196 (2%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
FY+ ++ +GT LGFW+Y+MSDCL+FA F TY VLG+NY GP D+F++ +
Sbjct: 16 FYLTEEHHV---KNGTLLGFWVYVMSDCLIFACLFATYGVLGRNYDGGPTGADLFELPLV 72
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
++T +LLLSS++ FA+L R + + WL VT G F+ +EIYEFAHLI+ A
Sbjct: 73 ALNTSLLLLSSITYGFALLQGRKGR-VGSLLGWLAVTGLLGAGFLGLEIYEFAHLIAEGA 131
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
PQRSAFLS+FF LVG HGLHV FGL+WL VL++QI GLI N+RRL+CLSMFWHFLD
Sbjct: 132 GPQRSAFLSAFFTLVGTHGLHVTFGLVWLVVLMVQIGMHGLIIPNKRRLMCLSMFWHFLD 191
Query: 195 LIWICVFSFVYLMGVV 210
++WI VF+ VYLMGV+
Sbjct: 192 VVWIGVFTVVYLMGVL 207
>gi|83719897|ref|YP_442318.1| cytochrome c oxidase subunit III [Burkholderia thailandensis E264]
gi|167619298|ref|ZP_02387929.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis Bt4]
gi|257138515|ref|ZP_05586777.1| cytochrome c oxidase subunit III [Burkholderia thailandensis E264]
gi|83653722|gb|ABC37785.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis E264]
Length = 201
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A KR WL VT G F+ ME+ EF+HLI+ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHKRRRGAVFGWLAVTFVLGAAFLAMELREFSHLIAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LV HGLHV GL+W+ VLV+Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVATHGLHVTAGLLWMAVLVVQALRRPELTERDIRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|134296912|ref|YP_001120647.1| cytochrome c oxidase subunit III [Burkholderia vietnamiensis G4]
gi|134140069|gb|ABO55812.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia vietnamiensis
G4]
Length = 203
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 128/179 (71%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLLSS++ FAM
Sbjct: 26 GFWLYLMTDCVIFASLFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLLSSITYGFAM 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L A +R WL VT G F+ ME+ EF+HLI+ A PQRSAFLS+FFALVG H
Sbjct: 86 LG-AQRRRRGAVFVWLAVTFVLGAAFLAMELREFSHLIADGAGPQRSAFLSAFFALVGTH 144
Query: 153 GLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VLV+Q+ + G+ + RRL CLS+FWHFLD++WICVFSFVYL V+
Sbjct: 145 GLHVAVGLLWMVVLVVQMARGSGMTERDVRRLTCLSLFWHFLDIVWICVFSFVYLASVI 203
>gi|167720490|ref|ZP_02403726.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei DM98]
gi|254191301|ref|ZP_04897805.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pasteur
52237]
gi|157938973|gb|EDO94643.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pasteur
52237]
Length = 201
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A +R WL VT G F+ ME+ EF+HL++ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVGTHGLHVTAGLVWMAVLVAQALRRPDLTERDIRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|260221200|emb|CBA29527.1| Cytochrome o ubiquinol oxidase subunit 3 [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 179
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFW+YLMSDCL+FA F TY VLG++YAAGP ++FD++ + ++T LL SS++ FA
Sbjct: 2 LGFWLYLMSDCLIFAALFATYGVLGRSYAAGPNGAELFDLTLVAINTGFLLFSSITFGFA 61
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
ML + T+ WL VT G+ F+ +E+YEF HLI A PQRSAFLS+FF LVG
Sbjct: 62 MLRKQLGD-VKGTLIWLAVTGLLGLCFLGLELYEFHHLIQEGAGPQRSAFLSAFFTLVGT 120
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV FGLIWL VL++QI + GL N RRL+CLSMFWHFLD+IWI VF+FVYLMGV+
Sbjct: 121 HGLHVTFGLIWLVVLMLQIKQHGLTPANNRRLMCLSMFWHFLDVIWIGVFTFVYLMGVL 179
>gi|126453691|ref|YP_001067025.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106a]
gi|167846590|ref|ZP_02472098.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei B7210]
gi|237813134|ref|YP_002897585.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei MSHR346]
gi|242315461|ref|ZP_04814477.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106b]
gi|126227333|gb|ABN90873.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106a]
gi|237505149|gb|ACQ97467.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei MSHR346]
gi|242138700|gb|EES25102.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106b]
Length = 201
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A +R WL VT G F+ ME+ EF+HL++ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVGTHGLHVTAGLVWMAVLVAQALRRPDLTERDIRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|53719987|ref|YP_108973.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei K96243]
gi|167816683|ref|ZP_02448363.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei 91]
gi|167903560|ref|ZP_02490765.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei NCTC 13177]
gi|217421180|ref|ZP_03452685.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei 576]
gi|52210401|emb|CAH36382.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
pseudomallei K96243]
gi|217396592|gb|EEC36609.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei 576]
Length = 201
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A +R WL VT G F+ ME+ EF+HL++ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVGTHGLHVTAGLVWMAVLVAQALRRPELTERDIRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|126441942|ref|YP_001059740.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 668]
gi|134277941|ref|ZP_01764656.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 305]
gi|167744574|ref|ZP_02417348.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 14]
gi|167895176|ref|ZP_02482578.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 7894]
gi|167919810|ref|ZP_02506901.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei BCC215]
gi|254184266|ref|ZP_04890856.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1655]
gi|126221435|gb|ABN84941.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei 668]
gi|134251591|gb|EBA51670.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 305]
gi|184214797|gb|EDU11840.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1655]
Length = 201
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ A +R WL VT G F+ ME+ EF+HL++ A PQRSAFLS
Sbjct: 75 SSITYGFAMIG-AHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FWHFLD++WICVFS
Sbjct: 134 SFFTLVGTHGLHVTAGLVWMAVLVAQALRRPELTERDIRRLTCLSLFWHFLDIVWICVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|117617508|ref|YP_857448.1| cytochrome o ubiquinol oxidase subunit III [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117558915|gb|ABK35863.1| cytochrome o ubiquinol oxidase, subunit III [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 203
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+F++ +F T++LLLSS++ F M
Sbjct: 27 GFWIYLMSDCILFATLFATYAVLVNGTAGGPSGKDIFELPFVFAETMLLLLSSITFGFGM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA K + +WL +T FG FI MEIYEF HLI+ P RS FLS+FF LVG H
Sbjct: 87 LA-MNKNKVAAVNTWLFITFLFGAGFIAMEIYEFHHLIAEGYGPDRSGFLSAFFTLVGTH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ V+++ + KKGL N+ RL+CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 146 GIHVTSGLIWIIVMMVLVAKKGLTDRNRTRLMCLSLFWHFLDVVWICVFTVVYLMGVM 203
>gi|163857013|ref|YP_001631311.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii DSM
12804]
gi|163260741|emb|CAP43043.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii]
Length = 203
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D T GFWIYLMSD L+F+V F T+AVL K A GP ++FD+S + V T++LL+SS
Sbjct: 20 DGSKTVFGFWIYLMSDLLIFSVLFATFAVLSKATAGGPTGAELFDLSFVLVETMLLLISS 79
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML R + + WL VT FG FI MEIYEF HLI+ A PQRSA+LS+F
Sbjct: 80 FTFGMAMLNLHAGR-ARRVIGWLCVTFLFGAGFIGMEIYEFHHLITEGAGPQRSAYLSAF 138
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F L+G HGLHV FGL+W+ V+V + + GL S N RRL CLS+FWHFLD++WICVF+FVY
Sbjct: 139 FTLIGTHGLHVTFGLVWIAVMVDMVRRHGLDSVNVRRLSCLSLFWHFLDIVWICVFTFVY 198
Query: 206 LMGVV 210
L+G +
Sbjct: 199 LLGAL 203
>gi|319945342|ref|ZP_08019604.1| cytochrome o ubiquinol oxidase subunit III [Lautropia mirabilis
ATCC 51599]
gi|319741912|gb|EFV94337.1| cytochrome o ubiquinol oxidase subunit III [Lautropia mirabilis
ATCC 51599]
Length = 210
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 133/188 (70%), Gaps = 1/188 (0%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV 80
E+ +GT LGFW++L+ D L+FA F YAVLG++YA G + D+FD+ + +ST +
Sbjct: 21 TEAHPPENGTMLGFWLFLIGDLLLFACLFAAYAVLGRSYATGFSGADIFDLKLVALSTAL 80
Query: 81 LLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
LL +S S ++A H T+ WL +T FG+ F+ +EI+ F H+I M A PQRSA
Sbjct: 81 LLCASFSGGHGVVAMQDSE-KHATLGWLALTGLFGLTFLGIEIHAFNHMIGMGATPQRSA 139
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
FLS+FFALVG+HGLHV FGL+WL L++Q+ + GLI N+RR+ CL++FWHFLD++W+ V
Sbjct: 140 FLSAFFALVGIHGLHVAFGLVWLITLLVQVGQHGLIPANRRRIRCLTLFWHFLDVVWVAV 199
Query: 201 FSFVYLMG 208
FS VYL+G
Sbjct: 200 FSLVYLIG 207
>gi|107028751|ref|YP_625846.1| cytochrome c oxidase, subunit III [Burkholderia cenocepacia AU
1054]
gi|116690090|ref|YP_835713.1| cytochrome c oxidase, subunit III [Burkholderia cenocepacia HI2424]
gi|170733424|ref|YP_001765371.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
cenocepacia MC0-3]
gi|105897915|gb|ABF80873.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia cenocepacia
AU 1054]
gi|116648179|gb|ABK08820.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia cenocepacia
HI2424]
gi|169816666|gb|ACA91249.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
cenocepacia MC0-3]
Length = 202
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 135/200 (67%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA G ++FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYQQRR-GALLAWLAVTFVLGAAFLTMELREFSHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVLRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|134296074|ref|YP_001119809.1| cytochrome c oxidase subunit III [Burkholderia vietnamiensis G4]
gi|134139231|gb|ABO54974.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia vietnamiensis
G4]
Length = 202
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 133/200 (66%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG A GP D+FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGNQTAGGPTAKDLFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA +R + WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLAGYKQRR-GALLGWLAVTFVLGAAFLAMELREFSHLIAD 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVLRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|71274826|ref|ZP_00651114.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Dixon]
gi|71899872|ref|ZP_00682021.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1]
gi|170729929|ref|YP_001775362.1| cytochrome o ubiquinol oxidase subunit III [Xylella fastidiosa M12]
gi|71164558|gb|EAO14272.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Dixon]
gi|71730389|gb|EAO32471.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1]
gi|167964722|gb|ACA11732.1| cytochrome o ubiquinol oxidase subunit III [Xylella fastidiosa M12]
Length = 202
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 127/183 (69%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSL+
Sbjct: 21 DNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVLVETFLLLFSSLT 80
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+A A KR I WL+VTA FG+ F+ ME+YEF HLI A P RSAFLS+FF
Sbjct: 81 FGFAMIA-AHKRHIPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAGPGRSAFLSAFFT 139
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFL +IWI VF+ VYL+
Sbjct: 140 LVGTHGLHVASGLLWMLILVIQIVKNGLTPRNSTRLACLSLFWHFLGVIWIGVFTIVYLL 199
Query: 208 GVV 210
G +
Sbjct: 200 GAL 202
>gi|254247835|ref|ZP_04941156.1| Cytochrome C oxidase subunit III [Burkholderia cenocepacia PC184]
gi|124872611|gb|EAY64327.1| Cytochrome C oxidase subunit III [Burkholderia cenocepacia PC184]
Length = 202
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 135/200 (67%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA G ++FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA+ +R ++WL VT G F+ ME+ EF+HL++
Sbjct: 64 GVAVETAALLLSSITYGFAMLAAYQQRR-GALLAWLAVTFVLGAAFLTMELREFSHLVAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVLRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|206560506|ref|YP_002231270.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
cenocepacia J2315]
gi|198036547|emb|CAR52444.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
cenocepacia J2315]
Length = 202
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 135/200 (67%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA G ++FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAMLA A K+ ++WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLA-AYKQQRGALLAWLAVTFVLGAAFLAMELREFSHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMLVLAAQIVFRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|325522319|gb|EGD00931.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia sp. TJI49]
Length = 202
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 134/200 (67%), Gaps = 8/200 (4%)
Query: 18 KDKKESCVDHDG-----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
K + ++HD + GFW+YLM+DC++FA F T+AVLG YA G ++FDI
Sbjct: 4 KTLSATLLEHDDHPPSHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIP 63
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
G+ V T LLLSS++ FAML++ +R + WL VT G F+ ME+ EF+HLI+
Sbjct: 64 GVAVETAALLLSSITYGFAMLSAYQQRR-GALLGWLAVTFVLGAAFLAMELREFSHLIAE 122
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFW 190
A PQRSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FW
Sbjct: 123 GAGPQRSAFLSAFFTLVGTHGLHVTAGLLWMVVLAAQIVSRGGDLTDRDLRRLTCLSLFW 182
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYL V+
Sbjct: 183 HFLDIVWICVFSFVYLASVI 202
>gi|307129920|ref|YP_003881936.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii 3937]
gi|306527449|gb|ADM97379.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii 3937]
Length = 204
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F + F TYAVL A GP ++FD+ + V T LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFGMLFATYAVLVNGTAGGPTGKELFDLKFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL +T FG++FI MEIYEF HLI+ A P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNAWLGLTFLFGLVFIGMEIYEFHHLIAEGAGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ +++IQ+ K GL S N+ RL+CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GIHVTSGLIWIAIMMIQVTKYGLTSRNKTRLMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|15596516|ref|NP_250010.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
PAO1]
gi|116049271|ref|YP_791926.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152989269|ref|YP_001349425.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
PA7]
gi|218892576|ref|YP_002441445.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
LESB58]
gi|296390304|ref|ZP_06879779.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
PAb1]
gi|313106308|ref|ZP_07792552.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
39016]
gi|81783807|sp|Q9I425|CYOC_PSEAE RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III
gi|9947257|gb|AAG04708.1|AE004561_4 cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
PAO1]
gi|115584492|gb|ABJ10507.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
UCBPP-PA14]
gi|150964427|gb|ABR86452.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas aeruginosa
PA7]
gi|218772804|emb|CAW28589.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
LESB58]
gi|310879054|gb|EFQ37648.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
39016]
Length = 209
Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 134/202 (66%), Gaps = 8/202 (3%)
Query: 16 YVKDKKESCVDHD-------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
++ D E DHD T GFW+YLM+DC++FA F TYAVL + A GP+ D+
Sbjct: 9 HLADAHEVGHDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDI 68
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
F++ + V T +LL+SS + AML SA K + ++WL VT G FI MEI EF H
Sbjct: 69 FELPYVLVETAILLVSSCTYGLAML-SAHKGAKGQAIAWLGVTFLLGAAFIGMEINEFHH 127
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI+ P RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+
Sbjct: 128 LIAEGFGPSRSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSL 187
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD++WICVF+ VYLMG +
Sbjct: 188 FWHFLDIVWICVFTVVYLMGAL 209
>gi|49079172|gb|AAT49862.1| PA1319 [synthetic construct]
Length = 210
Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 134/202 (66%), Gaps = 8/202 (3%)
Query: 16 YVKDKKESCVDHD-------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
++ D E DHD T GFW+YLM+DC++FA F TYAVL + A GP+ D+
Sbjct: 9 HLADAHEVGHDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDI 68
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
F++ + V T +LL+SS + AML SA K + ++WL VT G FI MEI EF H
Sbjct: 69 FELPYVLVETAILLVSSCTYGLAML-SAHKGAKGQAIAWLGVTFLLGAAFIGMEINEFHH 127
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI+ P RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+
Sbjct: 128 LIAEGFGPSRSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSL 187
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD++WICVF+ VYLMG +
Sbjct: 188 FWHFLDIVWICVFTVVYLMGAL 209
>gi|107100770|ref|ZP_01364688.1| hypothetical protein PaerPA_01001798 [Pseudomonas aeruginosa PACS2]
Length = 204
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 134/202 (66%), Gaps = 8/202 (3%)
Query: 16 YVKDKKESCVDHD-------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
++ D E DHD T GFW+YLM+DC++FA F TYAVL + A GP+ D+
Sbjct: 4 HLADAHEVGHDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDI 63
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
F++ + V T +LL+SS + AML SA K + ++WL VT G FI MEI EF H
Sbjct: 64 FELPYVLVETAILLVSSCTYGLAML-SAHKGAKGQAIAWLGVTFLLGAAFIGMEINEFHH 122
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI+ P RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+
Sbjct: 123 LIAEGFGPSRSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSL 182
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD++WICVF+ VYLMG +
Sbjct: 183 FWHFLDIVWICVFTVVYLMGAL 204
>gi|254234441|ref|ZP_04927764.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
C3719]
gi|126166372|gb|EAZ51883.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa
C3719]
Length = 209
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 134/202 (66%), Gaps = 8/202 (3%)
Query: 16 YVKDKKESCVDHD-------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
++ D E DHD T GFW+YLM+DC++FA F TYAVL + A GP+ D+
Sbjct: 9 HLADAHEVGHDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDI 68
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
F++ + V T +LL+SS + AML SA K + ++WL VT G FI MEI EF H
Sbjct: 69 FELPYVLVETAILLVSSCTYGLAML-SAHKGAKGQAIAWLGVTFLLGAAFIGMEINEFHH 127
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI+ P RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+
Sbjct: 128 LIAEGFGPSRSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSL 187
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD++WICVF+ VY+MG +
Sbjct: 188 FWHFLDMVWICVFTVVYMMGAL 209
>gi|251790655|ref|YP_003005376.1| cytochrome o ubiquinol oxidase subunit III [Dickeya zeae Ech1591]
gi|247539276|gb|ACT07897.1| cytochrome o ubiquinol oxidase, subunit III [Dickeya zeae Ech1591]
Length = 204
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F + F TYAVL A GP ++FD+ + V T LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFGMLFATYAVLVNGTAGGPTGKELFDLKFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL +T FG++FI MEIYEF HLI+ A P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNAWLGLTFLFGLVFIGMEIYEFHHLIAEGAGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ V++IQ+ K GL S N+ RL+CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GIHVTSGLIWIAVMMIQVSKFGLTSTNKTRLMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|188534642|ref|YP_001908439.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia tasmaniensis
Et1/99]
gi|188029684|emb|CAO97563.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia tasmaniensis
Et1/99]
Length = 204
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TY V+ N A GPA D+F++ + V T +LLLSS++ FA+
Sbjct: 28 GFWIYLMSDCIIFATLFATYGVMVNNTAGGPAGKDIFELPFVLVETALLLLSSITYGFAV 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + K + WL +T FG+ FI MEIYEF HLI+ P RS FLS+FF LVG H
Sbjct: 88 I-NMNKGQKGAVIGWLAMTFLFGLGFIGMEIYEFHHLIAEGFGPDRSGFLSAFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 147 GLHVTSGLIWMLVLMYQVAKRGLSDSNRTRIMCLSLFWHFLDVVWICVFTIVYLMGVM 204
>gi|317492922|ref|ZP_07951346.1| cytochrome o ubiquinol oxidase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919044|gb|EFV40379.1| cytochrome o ubiquinol oxidase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 206
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 7/196 (3%)
Query: 21 KESCVDH------DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
+E+ +H D GFW+YLMSDC++FA F TYAVL A GP+ D+F++ +
Sbjct: 12 QEAHAEHGHHDAGDTKVFGFWVYLMSDCILFASLFATYAVLVNGTADGPSGKDIFELPFV 71
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T +LL SS++ FAMLA K + +WL +T FG FI MEIYEF HLI+
Sbjct: 72 LVETFLLLFSSITYGFAMLA-MNKGKVASVNTWLGLTFLFGAGFIAMEIYEFHHLIAEGF 130
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P +SAFLS+FF LVG HG+HV GLIW+ V++IQ+ KKGL + N+ RL+CLS+FWHFLD
Sbjct: 131 GPDKSAFLSAFFTLVGTHGIHVTSGLIWIIVMMIQVGKKGLTARNRTRLMCLSLFWHFLD 190
Query: 195 LIWICVFSFVYLMGVV 210
++WICVF+ VYLMG +
Sbjct: 191 VVWICVFTVVYLMGAM 206
>gi|293392552|ref|ZP_06636872.1| quinol oxidase subunit III [Serratia odorifera DSM 4582]
gi|291424954|gb|EFE98163.1| quinol oxidase subunit III [Serratia odorifera DSM 4582]
Length = 204
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+FD+ + V T +LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFASLFATYAVLVNGTAGGPSGKDIFDLKFVLVETFLLLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ K + +WL +T FG+ F+ MEIYEF HLI+ P SAFLSSFFALVG H
Sbjct: 88 IG-MNKGKVGSVNTWLFLTFLFGLGFVAMEIYEFHHLIAEGFGPDHSAFLSSFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ +++IQ+ K GL S N+ RL+CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 147 GLHVSAGLVWIIIMMIQVSKHGLTSTNKTRLMCLSLFWHFLDVVWICVFTVVYLLGVM 204
>gi|167585491|ref|ZP_02377879.1| cytochrome c oxidase, subunit III [Burkholderia ubonensis Bu]
Length = 203
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLLSS++ FAM
Sbjct: 26 GFWLYLMTDCVIFASLFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLLSSITYGFAM 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L A +R WL VT G+ F+ ME+ EF+HLI+ A P RSAFLS+FFALVG H
Sbjct: 86 LG-AQRRRRGAVFVWLAVTFVLGVAFLAMELREFSHLIAEGAGPGRSAFLSAFFALVGTH 144
Query: 153 GLHVFFGLIWLFVLVIQIL-KKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VLV+QI G+ + RRL CLS+FWHFLD++WICVFSFVYL V+
Sbjct: 145 GLHVAVGLLWMVVLVVQIACGPGMTERDFRRLTCLSLFWHFLDIVWICVFSFVYLASVI 203
>gi|304395492|ref|ZP_07377375.1| cytochrome o ubiquinol oxidase, subunit III [Pantoea sp. aB]
gi|304356786|gb|EFM21150.1| cytochrome o ubiquinol oxidase, subunit III [Pantoea sp. aB]
Length = 204
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 132/201 (65%), Gaps = 4/201 (1%)
Query: 13 SLFYVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVF 69
+L + D HD GFWIYLMSDC++FA F TYAV+ N A GPA D+F
Sbjct: 5 TLKHHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIF 64
Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129
++ + V T +LLLSS++ A++ S K + WL +T FG+ FI MEIYEF HL
Sbjct: 65 ELPFVLVETALLLLSSITYGMAVI-SMNKEQKGAVIGWLALTFLFGLGFIGMEIYEFHHL 123
Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189
I+ P RS FLS FF LVG HGLHV GLIW+ VL+ Q+ K+GL + N+ R++CLS+F
Sbjct: 124 IAEGFGPDRSGFLSGFFTLVGTHGLHVTSGLIWMLVLMFQVSKRGLNATNRTRIMCLSLF 183
Query: 190 WHFLDLIWICVFSFVYLMGVV 210
WHFLD++WICVF+ VYLMG +
Sbjct: 184 WHFLDVVWICVFTVVYLMGAM 204
>gi|259909262|ref|YP_002649618.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia pyrifoliae
Ep1/96]
gi|224964884|emb|CAX56406.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia pyrifoliae
Ep1/96]
gi|283479314|emb|CAY75230.1| cytochrome o ubiquinol oxidase subunit III [Erwinia pyrifoliae DSM
12163]
gi|310766835|gb|ADP11785.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia sp. Ejp617]
Length = 204
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TY V+ N A GPA D+F++ + V T +LLLSS++ FA+
Sbjct: 28 GFWIYLMSDCIIFATLFATYGVMVNNTAGGPAGKDIFELPFVLVETALLLLSSITYGFAV 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + K + WL +T FG+ FI MEIYEF HLI+ P RS FLS FF LVG H
Sbjct: 88 I-NMNKGQKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAEGFGPDRSGFLSGFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 147 GLHVTSGLIWMLVLMYQVAKRGLNDTNRTRIMCLSLFWHFLDVVWICVFTIVYLMGVM 204
>gi|325914850|ref|ZP_08177185.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas vesicatoria
ATCC 35937]
gi|325538941|gb|EGD10602.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas vesicatoria
ATCC 35937]
Length = 210
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL+SSLS
Sbjct: 31 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLISSLSFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 91 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 150 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|193068624|ref|ZP_03049585.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
E110019]
gi|192957987|gb|EDV88429.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
E110019]
Length = 204
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 131/186 (70%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P+RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPERSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|82542918|ref|YP_406865.1| cytochrome o ubiquinol oxidase subunit III [Shigella boydii Sb227]
gi|187731346|ref|YP_001879140.1| cytochrome o ubiquinol oxidase subunit III [Shigella boydii CDC
3083-94]
gi|81244329|gb|ABB65037.1| cytochrome o ubiquinol oxidase subunit III [Shigella boydii Sb227]
gi|187428338|gb|ACD07612.1| cytochrome o ubiquinol oxidase, subunit III [Shigella boydii CDC
3083-94]
gi|320186059|gb|EFW60804.1| Cytochrome O ubiquinol oxidase subunit III [Shigella flexneri CDC
796-83]
Length = 204
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|271499590|ref|YP_003332615.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii
Ech586]
gi|270343145|gb|ACZ75910.1| cytochrome o ubiquinol oxidase, subunit III [Dickeya dadantii
Ech586]
Length = 204
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F + F TY+VL A GP ++FD+ + V T LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFGMLFATYSVLVNGTAGGPTGKELFDLKFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL +T FG++FI ME+YEF HLI A P RSAFLSSFFALVG H
Sbjct: 88 IA-MNKGNKSQVNAWLGLTFLFGLVFIGMEVYEFHHLIVEGAGPDRSAFLSSFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ +++IQ+ K GL S N+ RL+CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GIHVTSGLIWIAIMMIQVTKYGLTSTNKTRLMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|292487460|ref|YP_003530332.1| cytochrome o ubiquinol oxidase subunit III [Erwinia amylovora
CFBP1430]
gi|292898702|ref|YP_003538071.1| cytochrome O ubiquinol oxidase subunit III [Erwinia amylovora ATCC
49946]
gi|291198550|emb|CBJ45658.1| cytochrome O ubiquinol oxidase subunit III [Erwinia amylovora ATCC
49946]
gi|291552879|emb|CBA19924.1| cytochrome o ubiquinol oxidase subunit III [Erwinia amylovora
CFBP1430]
gi|312171564|emb|CBX79822.1| cytochrome o ubiquinol oxidase subunit III [Erwinia amylovora ATCC
BAA-2158]
Length = 204
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TY V+ N A GPA D+F++ + V T +LLLSS++ FA+
Sbjct: 28 GFWIYLMSDCIIFATLFATYGVMVNNTAGGPAGKDIFELPFVLVETALLLLSSITYGFAV 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + K + WL +T FG+ FI MEIYEF HLI+ P RS FLS FF LVG H
Sbjct: 88 I-NMNKGHKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAEGFGPDRSGFLSGFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 147 GLHVTSGLIWMLVLMYQVAKRGLNDTNRTRIMCLSLFWHFLDVVWICVFTIVYLMGVM 204
>gi|311280673|ref|YP_003942904.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter cloacae
SCF1]
gi|308749868|gb|ADO49620.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter cloacae
SCF1]
Length = 204
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F++ F TYAVL N A GP+ D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFSILFATYAVLVNNTAGGPSGKDIFELPFVLVETALLLFSSITYGLAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI ME+YEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MYKNNKSQVISWLALTWLFGAGFIGMELYEFHHLIVEGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ QI ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMFQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204
>gi|157369331|ref|YP_001477320.1| cytochrome o ubiquinol oxidase subunit III [Serratia proteamaculans
568]
gi|157321095|gb|ABV40192.1| Cytochrome o ubiquinol oxidase subunit III [Serratia proteamaculans
568]
Length = 205
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+FD+ + V T +LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFASLFATYAVLVNGTAGGPSGKDIFDLKFVLVETFLLLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ K + +WL +T FG+ F+ MEIYEF HLI P RSAFLS FFALV H
Sbjct: 88 IG-MNKGKVGSVNTWLFLTFLFGLGFVAMEIYEFHHLIVEGYGPDRSAFLSGFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ +++IQ+ K+GL S N+ RL+CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 147 GLHVTTGLVWIVIMMIQVSKRGLTSTNKTRLMCLSLFWHFLDVVWICVFTVVYLLGVM 204
>gi|308185900|ref|YP_003930031.1| cytochrome o ubiquinol oxidase subunit III [Pantoea vagans C9-1]
gi|308056410|gb|ADO08582.1| cytochrome o ubiquinol oxidase subunit III [Pantoea vagans C9-1]
Length = 205
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAV+ N A GPA D+F++ + V T +LLLSS++ A+
Sbjct: 29 GFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFELPFVLVETALLLLSSITYGMAV 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ S K + WL +T FG+ FI MEIYEF HLI+ P RS FLS FF LVG H
Sbjct: 89 I-SMNKEQKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAEGFGPDRSGFLSGFFTLVGTH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ K+GL + N+ R++CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 148 GLHVTSGLIWMLVLMFQVSKRGLNATNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM 205
>gi|123443351|ref|YP_001007325.1| cytochrome o ubiquinol oxidase subunit III [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|332160741|ref|YP_004297318.1| cytochrome o ubiquinol oxidase subunit III [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|122090312|emb|CAL13178.1| cytochrome O ubiquinol oxidase subunit III [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|318604620|emb|CBY26118.1| cytochrome O ubiquinol oxidase subunit III [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325664971|gb|ADZ41615.1| cytochrome o ubiquinol oxidase subunit III [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 204
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVLVETFLLLFSSITYGIAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L K ++ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV H
Sbjct: 88 LG-MNKGHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GIHVTAGLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 204
>gi|315125954|ref|YP_004067957.1| cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain
C) [Pseudoalteromonas sp. SM9913]
gi|315014468|gb|ADT67806.1| cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain
C) [Pseudoalteromonas sp. SM9913]
Length = 210
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 143/209 (68%), Gaps = 5/209 (2%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
++ + P+ S+ + + ++ D T GFW+YLM+DCL+FA FF TYAVL N A
Sbjct: 7 TQGHVNLEPH-SVSHTHEHHDTSGD---TIFGFWLYLMTDCLLFASFFATYAVLYMNTAG 62
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
G + D+F++ + V T LL+SS++ FAM+A+ ++ T+ WL VT G +FI M
Sbjct: 63 GVSGKDIFELDFVAVETAALLISSITFGFAMIAAQGQKKA-LTLGWLAVTFCLGAVFIGM 121
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
EIYEF HLI PQ+SAFL+SFF+LVGLHGLHV GLIW+ +++I+++K+GL
Sbjct: 122 EIYEFHHLIVHGNGPQQSAFLTSFFSLVGLHGLHVTAGLIWMSIMMIEVIKRGLGKQTVT 181
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RL CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 182 RLSCLSLFWHFLDIVWICVFTVVYLMGAM 210
>gi|15800160|ref|NP_286172.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 EDL933]
gi|15829738|ref|NP_308511.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. Sakai]
gi|168749892|ref|ZP_02774914.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4113]
gi|168756972|ref|ZP_02781979.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4401]
gi|168761636|ref|ZP_02786643.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4501]
gi|168768381|ref|ZP_02793388.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4486]
gi|168776264|ref|ZP_02801271.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4196]
gi|168783296|ref|ZP_02808303.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4076]
gi|168786277|ref|ZP_02811284.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC869]
gi|168800313|ref|ZP_02825320.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC508]
gi|195938503|ref|ZP_03083885.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. EC4024]
gi|208807579|ref|ZP_03249916.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4206]
gi|208816111|ref|ZP_03257290.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4045]
gi|208822882|ref|ZP_03263200.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4042]
gi|209396662|ref|YP_002269076.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4115]
gi|217325930|ref|ZP_03442014.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. TW14588]
gi|254791614|ref|YP_003076451.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. TW14359]
gi|261223911|ref|ZP_05938192.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256375|ref|ZP_05948908.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. FRIK966]
gi|291281337|ref|YP_003498155.1| Cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli O55:H7
str. CB9615]
gi|12513289|gb|AAG54780.1|AE005222_5 cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. EDL933]
gi|13359941|dbj|BAB33907.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. Sakai]
gi|187768299|gb|EDU32143.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4196]
gi|188015926|gb|EDU54048.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4113]
gi|188999391|gb|EDU68377.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4076]
gi|189355966|gb|EDU74385.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4401]
gi|189362389|gb|EDU80808.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4486]
gi|189367976|gb|EDU86392.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4501]
gi|189373539|gb|EDU91955.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC869]
gi|189377389|gb|EDU95805.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC508]
gi|208727380|gb|EDZ76981.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4206]
gi|208732759|gb|EDZ81447.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4045]
gi|208737075|gb|EDZ84759.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4042]
gi|209158062|gb|ACI35495.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. EC4115]
gi|209743924|gb|ACI70269.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli]
gi|209743926|gb|ACI70270.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli]
gi|209743928|gb|ACI70271.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli]
gi|209743930|gb|ACI70272.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli]
gi|209743932|gb|ACI70273.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli]
gi|217322151|gb|EEC30575.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
O157:H7 str. TW14588]
gi|254591014|gb|ACT70375.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. TW14359]
gi|290761210|gb|ADD55171.1| Cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli O55:H7
str. CB9615]
gi|320638424|gb|EFX08138.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. G5101]
gi|320643804|gb|EFX12927.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H- str. 493-89]
gi|320649155|gb|EFX17733.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H- str. H 2687]
gi|320656048|gb|EFX23964.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320661198|gb|EFX28629.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O55:H7
str. USDA 5905]
gi|320665174|gb|EFX32267.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. LSU-61]
Length = 204
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 132/195 (67%), Gaps = 2/195 (1%)
Query: 17 VKDKKESCVDHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75
V + D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ +
Sbjct: 11 VHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF HLI
Sbjct: 71 VETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMG 129
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD+
Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDV 189
Query: 196 IWICVFSFVYLMGVV 210
+WICVF+ VYLMG +
Sbjct: 190 VWICVFTVVYLMGAM 204
>gi|329296775|ref|ZP_08254111.1| CyoC [Plautia stali symbiont]
Length = 204
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 131/200 (65%), Gaps = 7/200 (3%)
Query: 17 VKDKKESCVDHD------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
VK ++ +H GFWIYLMSDC++FA F TYAV+ N A GPA D+F+
Sbjct: 6 VKHHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFE 65
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ + V T +LLLSS++ A++A + +SWL +T FG FI MEIYEF HLI
Sbjct: 66 LPFVLVETALLLLSSITYGMAVIAMNNQNK-GSVISWLALTFLFGAGFIGMEIYEFHHLI 124
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
P RS FLS FF LVG HGLHV GLIW+ VL+ QI K+GL + N+ R++CLS+FW
Sbjct: 125 KEGFGPDRSGFLSGFFTLVGTHGLHVSSGLIWMAVLMFQIAKRGLSATNRTRIMCLSLFW 184
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVF+ VYLMG +
Sbjct: 185 HFLDVVWICVFTVVYLMGAM 204
>gi|333010887|gb|EGK30313.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
K-272]
gi|333021385|gb|EGK40638.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
K-227]
Length = 204
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDMVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|91209500|ref|YP_539486.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UTI89]
gi|117622690|ref|YP_851603.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli APEC
O1]
gi|215485511|ref|YP_002327942.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O127:H6 str. E2348/69]
gi|218557339|ref|YP_002390252.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli S88]
gi|237707576|ref|ZP_04538057.1| cytochrome o ubiquinol oxidase subunit III [Escherichia sp.
3_2_53FAA]
gi|91071074|gb|ABE05955.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UTI89]
gi|115511814|gb|ABI99888.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli APEC
O1]
gi|215263583|emb|CAS07913.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O127:H6 str. E2348/69]
gi|218364108|emb|CAR01773.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli S88]
gi|222032225|emb|CAP74964.1| Cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli LF82]
gi|226898786|gb|EEH85045.1| cytochrome o ubiquinol oxidase subunit III [Escherichia sp.
3_2_53FAA]
gi|294489594|gb|ADE88350.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
IHE3034]
gi|312945007|gb|ADR25834.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O83:H1
str. NRG 857C]
gi|315289855|gb|EFU49245.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
110-3]
gi|323952958|gb|EGB48826.1| cytochrome o ubiquinol oxidase [Escherichia coli H252]
gi|323958623|gb|EGB54326.1| cytochrome o ubiquinol oxidase [Escherichia coli H263]
Length = 204
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + VSWL +T FG FI MEIYEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|320540329|ref|ZP_08039981.1| cytochrome o ubiquinol oxidase subunit III [Serratia symbiotica
str. Tucson]
gi|320029649|gb|EFW11676.1| cytochrome o ubiquinol oxidase subunit III [Serratia symbiotica
str. Tucson]
Length = 205
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GPA D+F++ + V T +LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFACLFATYAVLANGTAGGPAGKDIFELKFVLVETFLLLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A ++ + WL +T FG+ F+ MEIYEF HLI P RSAFLSSFFALV H
Sbjct: 88 IAMKKGKVGGVNI-WLFLTFLFGLGFVAMEIYEFHHLIVEGFGPDRSAFLSSFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ +++IQ+ ++GL S N+ RL+CLS+FWHFLD+IWICVF+ VYL+GV+
Sbjct: 147 GLHVSIGLIWITIMMIQVSQRGLTSINKTRLMCLSLFWHFLDVIWICVFTVVYLLGVM 204
>gi|114327938|ref|YP_745095.1| cytochrome O ubiquinol oxidase subunit III [Granulibacter
bethesdensis CGDNIH1]
gi|114316112|gb|ABI62172.1| cytochrome O ubiquinol oxidase subunit III [Granulibacter
bethesdensis CGDNIH1]
Length = 207
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 130/187 (69%), Gaps = 3/187 (1%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
+H T GFW+YLM+DC++F+ F +AV +A GP ++FD+ + + T +LL SS
Sbjct: 22 EHGKTVFGFWLYLMTDCILFSGLFAAFAVARSQFAGGPTGQEIFDLKDVAIETALLLFSS 81
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
++ FAML + RL T+ WL VT FG+ F++ME+ EF+HLI+ A P RSAFLS+F
Sbjct: 82 ITYGFAMLQAHKHRL-GGTLQWLGVTFLFGLGFLLMEVKEFSHLIAEGAGPDRSAFLSAF 140
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQ--ILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F LVG HGLHV GL+W+ VLV Q +LKKGL RL CLS+FWHFLD++WICVFSF
Sbjct: 141 FTLVGTHGLHVTCGLLWMAVLVFQLGVLKKGLTPAYMSRLTCLSLFWHFLDIVWICVFSF 200
Query: 204 VYLMGVV 210
VYL GV+
Sbjct: 201 VYLAGVL 207
>gi|145299869|ref|YP_001142710.1| cytochrome o ubiquinol oxidase subunit III [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852641|gb|ABO90962.1| cytochrome o ubiquinol oxidase subunit III [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 204
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Query: 14 LFYVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
L + + HD GFWIYLMSDC++FA F TYAVL A GP+ D+F+
Sbjct: 6 LHHTHEGAHDHGHHDAGANKVFGFWIYLMSDCILFACLFATYAVLVNGTAGGPSGKDIFE 65
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ +F T++LL SS++ FAMLA R WLLVT G FI MEIYEF HLI
Sbjct: 66 LPFVFAETMLLLFSSITFGFAMLAMNKGRAA-AVNGWLLVTFVLGAGFIAMEIYEFHHLI 124
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
+ P RSAFLS+FF LVG HG+HV GLIWL V+++ + KKGL + RL+CLS+FW
Sbjct: 125 AEGYGPDRSAFLSAFFTLVGTHGIHVTSGLIWLIVMMVLVAKKGLTDRTRSRLMCLSLFW 184
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVF+ VYLMG +
Sbjct: 185 HFLDVVWICVFTVVYLMGAM 204
>gi|16128415|ref|NP_414964.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str.
K-12 substr. MG1655]
gi|24111812|ref|NP_706322.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a
str. 301]
gi|26246436|ref|NP_752475.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
CFT073]
gi|30061929|ref|NP_836100.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a
str. 2457T]
gi|74311005|ref|YP_309424.1| cytochrome o ubiquinol oxidase subunit III [Shigella sonnei Ss046]
gi|89107300|ref|AP_001080.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str.
K-12 substr. W3110]
gi|110804457|ref|YP_687977.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 5
str. 8401]
gi|157157815|ref|YP_001461616.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
E24377A]
gi|157159955|ref|YP_001457273.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli HS]
gi|170021198|ref|YP_001726152.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ATCC
8739]
gi|170080016|ref|YP_001729336.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str.
K-12 substr. DH10B]
gi|170680623|ref|YP_001742571.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
SMS-3-5]
gi|188495693|ref|ZP_03002963.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
53638]
gi|191166709|ref|ZP_03028536.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B7A]
gi|193065155|ref|ZP_03046228.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E22]
gi|194428821|ref|ZP_03061356.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B171]
gi|194432598|ref|ZP_03064884.1| cytochrome o ubiquinol oxidase, subunit III [Shigella dysenteriae
1012]
gi|194438854|ref|ZP_03070939.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
101-1]
gi|209917646|ref|YP_002291730.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli SE11]
gi|218552996|ref|YP_002385909.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI1]
gi|218688293|ref|YP_002396505.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ED1a]
gi|218693893|ref|YP_002401560.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 55989]
gi|218698658|ref|YP_002406287.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI39]
gi|218703713|ref|YP_002411232.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
UMN026]
gi|227884561|ref|ZP_04002366.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 83972]
gi|238899718|ref|YP_002925514.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
BW2952]
gi|253774582|ref|YP_003037413.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160499|ref|YP_003043607.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli B str.
REL606]
gi|256020400|ref|ZP_05434265.1| cytochrome o ubiquinol oxidase subunit III [Shigella sp. D9]
gi|256023953|ref|ZP_05437818.1| cytochrome o ubiquinol oxidase subunit III [Escherichia sp.
4_1_40B]
gi|260842631|ref|YP_003220409.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O103:H2 str. 12009]
gi|260853653|ref|YP_003227544.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O26:H11 str. 11368]
gi|260866591|ref|YP_003232993.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O111:H- str. 11128]
gi|293403550|ref|ZP_06647641.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
FVEC1412]
gi|293408579|ref|ZP_06652418.1| cytochrome o ubiquinol oxidase [Escherichia coli B354]
gi|293413685|ref|ZP_06656334.1| cytochrome o ubiquinol oxidase [Escherichia coli B185]
gi|293418500|ref|ZP_06660935.1| cytochrome o ubiquinol oxidase [Escherichia coli B088]
gi|298379162|ref|ZP_06989043.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
FVEC1302]
gi|300818241|ref|ZP_07098452.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
107-1]
gi|300820327|ref|ZP_07100479.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
119-7]
gi|300900498|ref|ZP_07118665.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
198-1]
gi|300903305|ref|ZP_07121233.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
84-1]
gi|300918189|ref|ZP_07134796.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
115-1]
gi|300924155|ref|ZP_07140147.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
182-1]
gi|300930270|ref|ZP_07145683.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
187-1]
gi|300937044|ref|ZP_07151910.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
21-1]
gi|300947919|ref|ZP_07162067.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
116-1]
gi|300957995|ref|ZP_07170160.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS
175-1]
gi|300988017|ref|ZP_07178497.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
45-1]
gi|301022579|ref|ZP_07186451.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
69-1]
gi|301025683|ref|ZP_07189199.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
196-1]
gi|301049631|ref|ZP_07196582.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS
185-1]
gi|301301578|ref|ZP_07207713.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
124-1]
gi|301330704|ref|ZP_07223306.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
78-1]
gi|301647353|ref|ZP_07247165.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS
146-1]
gi|307312192|ref|ZP_07591828.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli W]
gi|331640948|ref|ZP_08342083.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H736]
gi|331645604|ref|ZP_08346708.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M605]
gi|331651366|ref|ZP_08352391.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M718]
gi|331661809|ref|ZP_08362732.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA143]
gi|331666784|ref|ZP_08367658.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA271]
gi|331671976|ref|ZP_08372772.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA280]
gi|331676101|ref|ZP_08376813.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H591]
gi|331681824|ref|ZP_08382457.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H299]
gi|332281580|ref|ZP_08393993.1| cytochrome o ubiquinol oxidase subunit III [Shigella sp. D9]
gi|78099994|sp|P0ABJ4|CYOC_ECOL6 RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III;
AltName: Full=Ubiquinol oxidase chain C
gi|78099995|sp|P0ABJ3|CYOC_ECOLI RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III;
AltName: Full=Ubiquinol oxidase chain C
gi|78099996|sp|P0ABJ5|CYOC_SHIFL RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III;
AltName: Full=Ubiquinol oxidase chain C
gi|11514519|pdb|1FFT|C Chain C, The Structure Of Ubiquinol Oxidase From Escherichia Coli
gi|11514523|pdb|1FFT|H Chain H, The Structure Of Ubiquinol Oxidase From Escherichia Coli
gi|26106834|gb|AAN79019.1|AE016756_202 Cytochrome O ubiquinol oxidase subunit III [Escherichia coli
CFT073]
gi|145654|gb|AAA23633.1| cytochrome o ubiquinol oxidase C subunit [Escherichia coli]
gi|1773114|gb|AAB40186.1| cytochrome o ubiquinol oxidase [Escherichia coli]
gi|1786633|gb|AAC73533.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str.
K-12 substr. MG1655]
gi|24050602|gb|AAN42029.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a
str. 301]
gi|30040173|gb|AAP15906.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a
str. 2457T]
gi|73854482|gb|AAZ87189.1| cytochrome o ubiquinol oxidase subunit III [Shigella sonnei Ss046]
gi|85674570|dbj|BAE76210.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str.
K12 substr. W3110]
gi|110614005|gb|ABF02672.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 5
str. 8401]
gi|157065635|gb|ABV04890.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli HS]
gi|157079845|gb|ABV19553.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
E24377A]
gi|169756126|gb|ACA78825.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli ATCC
8739]
gi|169887851|gb|ACB01558.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str.
K-12 substr. DH10B]
gi|170518341|gb|ACB16519.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
SMS-3-5]
gi|188490892|gb|EDU65995.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
53638]
gi|190903220|gb|EDV62942.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B7A]
gi|192927129|gb|EDV81750.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E22]
gi|194413124|gb|EDX29411.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B171]
gi|194419159|gb|EDX35242.1| cytochrome o ubiquinol oxidase, subunit III [Shigella dysenteriae
1012]
gi|194422148|gb|EDX38150.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
101-1]
gi|209910905|dbj|BAG75979.1| cytochrome O ubiquinol oxidase subunit III [Escherichia coli SE11]
gi|218350625|emb|CAU96317.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 55989]
gi|218359764|emb|CAQ97305.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI1]
gi|218368644|emb|CAR16383.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI39]
gi|218425857|emb|CAR06663.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ED1a]
gi|218430810|emb|CAR11684.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
UMN026]
gi|227838647|gb|EEJ49113.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 83972]
gi|238860709|gb|ACR62707.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
BW2952]
gi|242376211|emb|CAQ30902.1| cytochrome bo terminal oxidase subunit III, subunit of cytochrome
bo terminal oxidase [Escherichia coli BL21(DE3)]
gi|253325626|gb|ACT30228.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972400|gb|ACT38071.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli B str.
REL606]
gi|253976610|gb|ACT42280.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
BL21(DE3)]
gi|257752302|dbj|BAI23804.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O26:H11 str. 11368]
gi|257757778|dbj|BAI29275.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O103:H2 str. 12009]
gi|257762947|dbj|BAI34442.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
O111:H- str. 11128]
gi|260450383|gb|ACX40805.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli DH1]
gi|281177600|dbj|BAI53930.1| cytochrome O ubiquinol oxidase subunit III [Escherichia coli SE15]
gi|281599766|gb|ADA72750.1| Cytochrome o ubiquinol oxidase subunit 3 [Shigella flexneri
2002017]
gi|284920240|emb|CBG33299.1| cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli 042]
gi|291325028|gb|EFE64443.1| cytochrome o ubiquinol oxidase [Escherichia coli B088]
gi|291429403|gb|EFF02423.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
FVEC1412]
gi|291433743|gb|EFF06716.1| cytochrome o ubiquinol oxidase [Escherichia coli B185]
gi|291471757|gb|EFF14240.1| cytochrome o ubiquinol oxidase [Escherichia coli B354]
gi|298280275|gb|EFI21779.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli
FVEC1302]
gi|299879995|gb|EFI88206.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
196-1]
gi|300298624|gb|EFJ55009.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS
185-1]
gi|300315331|gb|EFJ65115.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS
175-1]
gi|300355979|gb|EFJ71849.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
198-1]
gi|300397460|gb|EFJ80998.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
69-1]
gi|300404600|gb|EFJ88138.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
84-1]
gi|300407569|gb|EFJ91107.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
45-1]
gi|300414640|gb|EFJ97950.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
115-1]
gi|300419608|gb|EFK02919.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
182-1]
gi|300452519|gb|EFK16139.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
116-1]
gi|300457875|gb|EFK21368.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
21-1]
gi|300461842|gb|EFK25335.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
187-1]
gi|300527112|gb|EFK48181.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
119-7]
gi|300529132|gb|EFK50194.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
107-1]
gi|300843075|gb|EFK70835.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
124-1]
gi|300843365|gb|EFK71125.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
78-1]
gi|301074498|gb|EFK89304.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS
146-1]
gi|306907694|gb|EFN38196.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli W]
gi|307552336|gb|ADN45111.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ABU
83972]
gi|309700691|emb|CBI99987.1| cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli ETEC
H10407]
gi|315059710|gb|ADT74037.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli W]
gi|315135112|dbj|BAJ42271.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli DH1]
gi|315256255|gb|EFU36223.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
85-1]
gi|315294191|gb|EFU53542.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
153-1]
gi|315299552|gb|EFU58800.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
16-3]
gi|320201674|gb|EFW76250.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli
EC4100B]
gi|323170515|gb|EFZ56165.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
LT-68]
gi|323379725|gb|ADX51993.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli KO11]
gi|323938615|gb|EGB34864.1| cytochrome o ubiquinol oxidase [Escherichia coli E1520]
gi|323943236|gb|EGB39392.1| cytochrome o ubiquinol oxidase [Escherichia coli E482]
gi|323945334|gb|EGB41390.1| cytochrome o ubiquinol oxidase [Escherichia coli H120]
gi|323963419|gb|EGB58981.1| cytochrome o ubiquinol oxidase [Escherichia coli H489]
gi|323972283|gb|EGB67493.1| cytochrome o ubiquinol oxidase [Escherichia coli TA007]
gi|324010060|gb|EGB79279.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
57-2]
gi|324016710|gb|EGB85929.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
117-3]
gi|324114657|gb|EGC08625.1| cytochrome o ubiquinol oxidase [Escherichia fergusonii B253]
gi|324116917|gb|EGC10830.1| cytochrome o ubiquinol oxidase [Escherichia coli E1167]
gi|325498279|gb|EGC96138.1| cytochrome o ubiquinol oxidase subunit III [Escherichia fergusonii
ECD227]
gi|330910222|gb|EGH38732.1| cytochrome O ubiquinol oxidase subunit 3 [Escherichia coli AA86]
gi|331037746|gb|EGI09966.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H736]
gi|331045766|gb|EGI17892.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M605]
gi|331051107|gb|EGI23159.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M718]
gi|331060231|gb|EGI32195.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA143]
gi|331066008|gb|EGI37892.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA271]
gi|331070965|gb|EGI42324.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA280]
gi|331076159|gb|EGI47441.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H591]
gi|331081026|gb|EGI52191.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H299]
gi|332094585|gb|EGI99631.1| cytochrome o ubiquinol oxidase, subunit III [Shigella boydii
5216-82]
gi|332103932|gb|EGJ07278.1| cytochrome o ubiquinol oxidase subunit III [Shigella sp. D9]
gi|332341793|gb|AEE55127.1| cytochrome O ubiquinol oxidase subunit III CyoC [Escherichia coli
UMNK88]
gi|332761785|gb|EGJ92064.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
2747-71]
gi|333007961|gb|EGK27437.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
K-218]
gi|333021982|gb|EGK41228.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
K-304]
Length = 204
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|317047168|ref|YP_004114816.1| cytochrome o ubiquinol oxidase subunit III [Pantoea sp. At-9b]
gi|316948785|gb|ADU68260.1| cytochrome o ubiquinol oxidase, subunit III [Pantoea sp. At-9b]
Length = 205
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD GFWIYLMSDC++FA F TYAV+ N A GPA D+F++ +
Sbjct: 11 HDAHAEHGHHDAGANKIFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFELPFV 70
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T +LLLSS++ A++A + +SWL +T FG FI MEIYEF HLI
Sbjct: 71 LVETALLLLSSITYGMAVIAMNNQNK-GAVISWLALTFLFGAGFIGMEIYEFHHLIMEGF 129
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RS FLS FF LVG HGLHV GLIW+ VL+ QI K+GL + N+ R++CLS+FWHFLD
Sbjct: 130 GPNRSGFLSGFFTLVGTHGLHVTSGLIWMAVLMFQISKRGLSATNRTRIMCLSLFWHFLD 189
Query: 195 LIWICVFSFVYLMGVV 210
++WICVF+ VYLMG +
Sbjct: 190 VVWICVFTIVYLMGAM 205
>gi|283784256|ref|YP_003364121.1| cytochrome o ubiquinol oxidase subunit 3 [Citrobacter rodentium
ICC168]
gi|282947710|emb|CBG87265.1| cytochrome o ubiquinol oxidase subunit 3 [Citrobacter rodentium
ICC168]
Length = 204
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MHKNNKSQVVSWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|323184740|gb|EFZ70111.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 1357]
Length = 199
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 15 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 74
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P RS FLS+
Sbjct: 75 SITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 133
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 134 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 193
Query: 205 YLMGVV 210
YLMG +
Sbjct: 194 YLMGAM 199
>gi|157146954|ref|YP_001454273.1| cytochrome o ubiquinol oxidase subunit III [Citrobacter koseri ATCC
BAA-895]
gi|157084159|gb|ABV13837.1| hypothetical protein CKO_02731 [Citrobacter koseri ATCC BAA-895]
Length = 206
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 30 GFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 89
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 90 IA-MHKDNKSQVVSWLALTFLFGAGFIGMEIYEFHHLIVEGMGPDRSGFLSAFFALVGTH 148
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 149 GLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM 206
>gi|306813104|ref|ZP_07447297.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli NC101]
gi|331656485|ref|ZP_08357447.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA206]
gi|305853867|gb|EFM54306.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli NC101]
gi|320197132|gb|EFW71749.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli
WV_060327]
gi|331054733|gb|EGI26742.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
TA206]
Length = 204
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + VSWL +T FG FI ME+YEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVVSWLALTWLFGAGFIGMELYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|161504382|ref|YP_001571494.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865729|gb|ABX22352.1| hypothetical protein SARI_02493 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 204
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MHKNNQSQVISWLALTFLFGAGFIGMEIYEFHHLIVEGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM 204
>gi|110640690|ref|YP_668418.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 536]
gi|191173519|ref|ZP_03035046.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli F11]
gi|300997383|ref|ZP_07181723.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
200-1]
gi|110342282|gb|ABG68519.1| cytochrome O ubiquinol oxidase subunit III [Escherichia coli 536]
gi|190906228|gb|EDV65840.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli F11]
gi|300304202|gb|EFJ58722.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
200-1]
gi|324010690|gb|EGB79909.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
60-1]
Length = 204
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 129/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFFLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|218549902|ref|YP_002383693.1| cytochrome o ubiquinol oxidase subunit III [Escherichia fergusonii
ATCC 35469]
gi|218357443|emb|CAQ90082.1| cytochrome o ubiquinol oxidase subunit III [Escherichia fergusonii
ATCC 35469]
gi|323965116|gb|EGB60575.1| cytochrome o ubiquinol oxidase [Escherichia coli M863]
gi|323976086|gb|EGB71179.1| cytochrome o ubiquinol oxidase [Escherichia coli TW10509]
Length = 204
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|323529724|ref|YP_004231876.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia sp.
CCGE1001]
gi|323386726|gb|ADX58816.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp.
CCGE1001]
Length = 202
Score = 194 bits (492), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DH--DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH T GFW+YLM+DC++FA F +AV+ +A GP+ D+FDI G+ V T VLLL
Sbjct: 16 DHGSSDTVFGFWLYLMTDCVLFASLFAVFAVMSNQFAGGPSGKDLFDIGGVAVETAVLLL 75
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAMLA A +R + WL VT G+ F+++E+ EF+HLI A P RSAFLS
Sbjct: 76 SSITYGFAMLA-ARRRKSAAVLGWLAVTFALGLAFLVLEMREFSHLIGEGAGPGRSAFLS 134
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFS 202
SFF LV HGLHV GL+W+ VL +Q+++ +S Q RL CLS+FWHFLD++WICVFS
Sbjct: 135 SFFTLVATHGLHVTVGLVWMAVLAVQVVRAPELSERQITRLTCLSLFWHFLDIVWICVFS 194
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 195 FVYLGSVL 202
>gi|91775646|ref|YP_545402.1| cytochrome c oxidase, subunit III [Methylobacillus flagellatus KT]
gi|91709633|gb|ABE49561.1| cytochrome bo3 quinol oxidase subunit 3 [Methylobacillus
flagellatus KT]
Length = 205
Score = 194 bits (492), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLM+D ++FA F TYAVL ++A GP D+F++ + + T +LL SS++ FAM
Sbjct: 29 GFWIYLMTDLILFATLFATYAVLSTSFAGGPTGKDIFELDYVLIETFLLLFSSITYGFAM 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K ++WL +T FG+ FI+ME+ EF HLI P RSAFLS+FF LVG H
Sbjct: 89 IAQH-KGNKQAVLNWLAITFLFGLGFIVMEVNEFHHLIHQGFGPDRSAFLSAFFTLVGTH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ QI KGL N RL+CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 148 GLHVTCGLIWMAVLMAQIWTKGLTETNNTRLMCLSLFWHFLDIVWICVFTVVYLMGVL 205
>gi|16759421|ref|NP_455038.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|29142807|ref|NP_806149.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56414403|ref|YP_151478.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|167551746|ref|ZP_02345499.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|213052104|ref|ZP_03344982.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213425864|ref|ZP_03358614.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213584682|ref|ZP_03366508.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
gi|213621012|ref|ZP_03373795.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
gi|25285521|pir||AD0557 cytochrome o ubiquinol oxidase chain III [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501712|emb|CAD08900.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138439|gb|AAO70009.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56128660|gb|AAV78166.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|205323470|gb|EDZ11309.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 204
Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MHKNNKSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM 204
>gi|170767661|ref|ZP_02902114.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia albertii
TW07627]
gi|170123149|gb|EDS92080.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia albertii
TW07627]
Length = 204
Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL++T FG FI ME+YEF HLI P RS FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLMLTWLFGAGFIGMELYEFHHLIVNGMGPDRSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTGTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|300721999|ref|YP_003711279.1| cytochrome o ubiquinol oxidase subunit III [Xenorhabdus nematophila
ATCC 19061]
gi|297628496|emb|CBJ89063.1| cytochrome o ubiquinol oxidase, subunit III [Xenorhabdus
nematophila ATCC 19061]
Length = 203
Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSD ++FA F TYAVL A GP D+F++ + V T +LL SS++ FAM
Sbjct: 27 GFWIYLMSDLVLFASLFATYAVLVNGTAGGPTGKDIFELDFVLVETFLLLFSSITYGFAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L S K + + WL +T FG+ FI ME+YEF LIS P RSAFLSSFFALV H
Sbjct: 87 L-SMNKGKVAQVNLWLFITFLFGLGFISMEVYEFHKLISEGFGPDRSAFLSSFFALVATH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIW+ VL++Q+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 146 GLHVTFGLIWIIVLMVQVSRRGLTEVNRTRLNCLSLFWHFLDVVWICVFTIVYLMGAM 203
>gi|323257871|gb|EGA41550.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
Length = 276
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 125/177 (70%), Gaps = 1/177 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI ME+YEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MHKNNKSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG
Sbjct: 147 GLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGA 203
>gi|109897617|ref|YP_660872.1| cytochrome c oxidase, subunit III [Pseudoalteromonas atlantica T6c]
gi|109699898|gb|ABG39818.1| cytochrome bo3 quinol oxidase subunit 3 [Pseudoalteromonas
atlantica T6c]
Length = 214
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F TYAVL N G + D+FD++ + V T LL+SS++
Sbjct: 35 TLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFDLNFVLVETAALLVSSITYG 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FA+L A K+ T+ WLLVT G +FI ME+YEF HLI P RSAFLSSFFALV
Sbjct: 95 FALLC-AHKQQRAGTLLWLLVTMALGCVFIAMEVYEFHHLIVEGNGPDRSAFLSSFFALV 153
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GL+W+ V+V+++LK+GL + RL CLS+FWHFLD++W+CVF+ VYL+G
Sbjct: 154 GMHGLHVTAGLVWMLVMVLEVLKRGLGAQTVTRLGCLSLFWHFLDIVWVCVFTVVYLLGA 213
Query: 210 V 210
+
Sbjct: 214 M 214
>gi|332532048|ref|ZP_08407931.1| cytochrome O ubiquinol oxidase, subunit III [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038389|gb|EGI74833.1| cytochrome O ubiquinol oxidase, subunit III [Pseudoalteromonas
haloplanktis ANT/505]
Length = 208
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DCL+FA FF TYAVL N A G + D+F++ + V T LL+SS++
Sbjct: 29 TVFGFWLYLMTDCLLFASFFATYAVLFMNTAGGVSGKDIFELDFVAVETAALLISSITFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A+ ++ T++WL VT G +FI ME+YEF HLI PQ+SAFL+SFF+LV
Sbjct: 89 FAMIAAQGQKKA-LTLTWLFVTFCLGAVFIGMEVYEFHHLIVHGNGPQQSAFLTSFFSLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHGLHV GLIW+ +++I++ K+GL RL CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 148 GLHGLHVTAGLIWMTIMMIEVAKRGLGKATVTRLSCLSLFWHFLDIVWICVFTVVYLMGA 207
Query: 210 V 210
+
Sbjct: 208 M 208
>gi|213023463|ref|ZP_03337910.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
Length = 186
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 10 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 69
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 70 IA-MHKNNKSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTH 128
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG +
Sbjct: 129 GLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM 186
>gi|307545743|ref|YP_003898222.1| cytochrome O ubiquinol oxidase subunit III [Halomonas elongata DSM
2581]
gi|307217767|emb|CBV43037.1| cytochrome o ubiquinol oxidase subunit III [Halomonas elongata DSM
2581]
Length = 204
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 133/200 (66%), Gaps = 7/200 (3%)
Query: 17 VKDKKESCVDHD-----GTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
+ + + +HD GT + GFW+YLMSD ++F F TYAVL + A GP P +VF+
Sbjct: 6 LSNHEGHAHEHDHHDTAGTKVFGFWVYLMSDLVIFGSLFATYAVLLRGTAGGPTPGEVFE 65
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ I V T +LL SS + A+LA R + + +WL +T G F+ ME+YEF HLI
Sbjct: 66 LPFILVETFLLLFSSFTYGMAVLAMNANR-VGQIKAWLAITFLLGAAFVGMEVYEFQHLI 124
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
P RSAFLS+FF LVG HGLHV FGLIW+ V++IQ+ KGL + R++CLS+FW
Sbjct: 125 HEGFGPDRSAFLSAFFTLVGTHGLHVTFGLIWILVMLIQLQTKGLTDMTRPRIMCLSLFW 184
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVFSFVYLMGV+
Sbjct: 185 HFLDIVWICVFSFVYLMGVL 204
>gi|16763822|ref|NP_459437.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62179053|ref|YP_215470.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161615369|ref|YP_001589334.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|167992293|ref|ZP_02573391.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168232416|ref|ZP_02657474.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168237553|ref|ZP_02662611.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|168240265|ref|ZP_02665197.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168261125|ref|ZP_02683098.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168465532|ref|ZP_02699414.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818950|ref|ZP_02830950.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194446076|ref|YP_002039683.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194450685|ref|YP_002044476.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194470084|ref|ZP_03076068.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194736872|ref|YP_002113472.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251191|ref|YP_002145422.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197265057|ref|ZP_03165131.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|198243166|ref|YP_002214395.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200390434|ref|ZP_03217045.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204927033|ref|ZP_03218235.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|238911427|ref|ZP_04655264.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|16418948|gb|AAL19396.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62126686|gb|AAX64389.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161364733|gb|ABX68501.1| hypothetical protein SPAB_03140 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404739|gb|ACF64961.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194408989|gb|ACF69208.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194456448|gb|EDX45287.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194712374|gb|ACF91595.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|195631945|gb|EDX50465.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197214894|gb|ACH52291.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197243312|gb|EDY25932.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197289515|gb|EDY28878.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197937682|gb|ACH75015.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199602879|gb|EDZ01425.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204323698|gb|EDZ08893.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205329523|gb|EDZ16287.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205333348|gb|EDZ20112.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205339947|gb|EDZ26711.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205344157|gb|EDZ30921.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205349684|gb|EDZ36315.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|267992154|gb|ACY87039.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|312911474|dbj|BAJ35448.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320084714|emb|CBY94505.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321226017|gb|EFX51068.1| Cytochrome O ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322642058|gb|EFY38668.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322647877|gb|EFY44352.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652555|gb|EFY48909.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322653283|gb|EFY49616.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660568|gb|EFY56804.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322713514|gb|EFZ05085.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323128760|gb|ADX16190.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|326622143|gb|EGE28488.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|332987390|gb|AEF06373.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 204
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI ME+YEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MHKNNKSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM 204
>gi|156935021|ref|YP_001438937.1| cytochrome o ubiquinol oxidase subunit III [Cronobacter sakazakii
ATCC BAA-894]
gi|156533275|gb|ABU78101.1| hypothetical protein ESA_02872 [Cronobacter sakazakii ATCC BAA-894]
Length = 205
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ AM
Sbjct: 29 GFWIYLMSDCILFACLFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAM 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + +SWL +T FG F+ MEIYEF HLI+ P +S FLS+FF LVG H
Sbjct: 89 IAMNNNKQ-SQVMSWLALTFLFGAGFVAMEIYEFHHLIAEGFGPDKSGFLSAFFTLVGTH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ V++I + ++GL N+ RL+CLSMFWHFLD++WICVFS VYLMG +
Sbjct: 148 GIHVTSGLIWMVVMMIHVSRRGLTHNNRARLMCLSMFWHFLDVVWICVFSVVYLMGAM 205
>gi|242240300|ref|YP_002988481.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii
Ech703]
gi|242132357|gb|ACS86659.1| cytochrome o ubiquinol oxidase, subunit III [Dickeya dadantii
Ech703]
Length = 203
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F + F TYAVL A GP+ D+FD+ + V T LL SS++ AM
Sbjct: 27 GFWIYLMSDCILFGMLFATYAVLVNGTAGGPSGKDIFDLKFVLVETFALLFSSITYGMAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL +T FG++FI MEIYEF LI P RSAFLS+FFALVG H
Sbjct: 87 IA-MNKNSKSQVNTWLALTFLFGLVFIGMEIYEFHKLIEEGFGPDRSAFLSAFFALVGTH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ +++ Q+ +GL + N+ RL+CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 146 GIHVTSGLIWIAIMMTQVAGRGLTATNRTRLMCLSLFWHFLDVVWICVFTVVYLMGAM 203
>gi|309794840|ref|ZP_07689261.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
145-7]
gi|308121493|gb|EFO58755.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS
145-7]
Length = 204
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 129/186 (69%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S
Sbjct: 20 DAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ A +A K + +SWL +T FG FI MEIYEF HLI P S FLS+
Sbjct: 80 SITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDHSGFLSA 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YLMG +
Sbjct: 199 YLMGAM 204
>gi|300715584|ref|YP_003740387.1| cytochrome o ubiquinol oxidase subunit III [Erwinia billingiae
Eb661]
gi|299061420|emb|CAX58532.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia billingiae
Eb661]
Length = 204
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 129/196 (65%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD GFWIYLMSDC++FA F T+ V+ + A GPA D+F++ +
Sbjct: 10 HDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATFGVMVNSTAGGPAGKDIFELPFV 69
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
T +LLLSS++ FA++ S K +SWL++T FG FI MEIYEF HLI
Sbjct: 70 LGETALLLLSSITYGFAVI-SMNKGSKGSVISWLMLTFLFGAGFIAMEIYEFHHLIMEGF 128
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
PQRS FLS+FF LVG HGLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFLD
Sbjct: 129 GPQRSGFLSAFFTLVGTHGLHVTSGLIWMAVLMYQVSKRGLTPTNRTRILCLSLFWHFLD 188
Query: 195 LIWICVFSFVYLMGVV 210
++WICVF+ VYLMG +
Sbjct: 189 VVWICVFTIVYLMGAM 204
>gi|260596798|ref|YP_003209369.1| cytochrome o ubiquinol oxidase subunit III [Cronobacter turicensis
z3032]
gi|260215975|emb|CBA28616.1| Cytochrome o ubiquinol oxidase subunit 3 [Cronobacter turicensis
z3032]
Length = 205
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ AM
Sbjct: 29 GFWIYLMSDCILFACLFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAM 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG F+ MEIYEF HLI+ P +S FLS+FF LVG H
Sbjct: 89 IA-MNKDKQSQVMSWLALTFLFGAGFVAMEIYEFHHLIAEGFGPDKSGFLSAFFTLVGTH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ V++I + ++GL N+ RL+CLSMFWHFLD++WICVFS VYLMG +
Sbjct: 148 GIHVTSGLIWMVVMMIHVSRRGLTHNNRARLMCLSMFWHFLDVVWICVFSVVYLMGAM 205
>gi|152968965|ref|YP_001334074.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206577207|ref|YP_002240091.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella pneumoniae
342]
gi|238893377|ref|YP_002918111.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae
NTUH-K2044]
gi|288936841|ref|YP_003440900.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella variicola
At-22]
gi|290510103|ref|ZP_06549473.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. 1_1_55]
gi|150953814|gb|ABR75844.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206566265|gb|ACI08041.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella pneumoniae
342]
gi|238545693|dbj|BAH62044.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|288891550|gb|ADC59868.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella variicola
At-22]
gi|289776819|gb|EFD84817.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. 1_1_55]
Length = 203
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 27 GFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMAA 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 87 IA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGTH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 146 GLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLSLFWHFLDVVWICVFSVVYLMGAM 203
>gi|237730407|ref|ZP_04560888.1| cytochrome o ubiquinol oxidase subunit III [Citrobacter sp. 30_2]
gi|283834251|ref|ZP_06353992.1| cytochrome o ubiquinol oxidase, subunit III [Citrobacter youngae
ATCC 29220]
gi|226905946|gb|EEH91864.1| cytochrome o ubiquinol oxidase subunit III [Citrobacter sp. 30_2]
gi|291069773|gb|EFE07882.1| cytochrome o ubiquinol oxidase, subunit III [Citrobacter youngae
ATCC 29220]
Length = 204
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI ME+YEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MYKNNKSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|153007395|ref|YP_001368610.1| cytochrome o ubiquinol oxidase subunit III [Ochrobactrum anthropi
ATCC 49188]
gi|151559283|gb|ABS12781.1| Cytochrome o ubiquinol oxidase subunit III [Ochrobactrum anthropi
ATCC 49188]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 5/200 (2%)
Query: 15 FYVKDKKESCVDHDG----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
F ++ + DH T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD
Sbjct: 11 FTGGNEHPAHEDHHDAGSTTLVGFWIYLMSDCVLFSGLFATYAVLAHQFAGGPTGRELFD 70
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
++ + + T++LL+SSL+ A L S K+ + WL VT G F+ ME+YEF HLI
Sbjct: 71 LNFVLIETMLLLVSSLTYGLATL-SMFKKNRAGLLFWLGVTFLLGAAFLAMEVYEFNHLI 129
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
A P RSAFLS+FFALVG HGLH+ GLIW+ VL Q+L+ GL NQ R++CLS+FW
Sbjct: 130 HEGAGPGRSAFLSAFFALVGTHGLHITSGLIWILVLSAQLLRDGLTEKNQTRVMCLSLFW 189
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD+IWI VF+ VYL+GV+
Sbjct: 190 HFLDIIWIGVFTLVYLLGVL 209
>gi|92113084|ref|YP_573012.1| cytochrome c oxidase, subunit III [Chromohalobacter salexigens DSM
3043]
gi|91796174|gb|ABE58313.1| cytochrome bo3 quinol oxidase subunit 3 [Chromohalobacter
salexigens DSM 3043]
Length = 205
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75
+ D E GFW+YLMSD ++F F TYAVL A GP+ D+F++ I
Sbjct: 12 HAHDGHEHHDAGGMKVFGFWVYLMSDLVIFGSLFATYAVLMNGTAGGPSGADIFELPLIL 71
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
+ST +LL SS + A+LA R + + WL++T F G FI +EIYEF HLI+
Sbjct: 72 ISTFLLLFSSFTYGMAVLAMNADR-VSQVRGWLILTFFLGAGFIGLEIYEFHHLIAEGFG 130
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
P RSAFLSSFF LVG HGLHV FGLIW+ V+++Q+ KGL + R++CLS+FWHFLD+
Sbjct: 131 PDRSAFLSSFFTLVGTHGLHVTFGLIWMLVMIVQLSTKGLNDMTRPRIMCLSLFWHFLDI 190
Query: 196 IWICVFSFVYLMGVV 210
+WICVF+FVYLMGV+
Sbjct: 191 VWICVFTFVYLMGVL 205
>gi|50120080|ref|YP_049247.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium
atrosepticum SCRI1043]
gi|49610606|emb|CAG74051.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium
atrosepticum SCRI1043]
Length = 204
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F F TYAVL A GP+ D+F + + V T LL SS++ AM
Sbjct: 28 GFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKDIFQLPFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL VT FG++FI MEIYEF HLI P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNTWLGVTFLFGLVFIGMEIYEFHHLIVEGYGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GLHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVVWICVFTVVYLLGAI 204
>gi|261822514|ref|YP_003260620.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium wasabiae
WPP163]
gi|261606527|gb|ACX89013.1| cytochrome o ubiquinol oxidase, subunit III [Pectobacterium
wasabiae WPP163]
Length = 204
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F F TYAVL A GP+ D+F + + V T LL SS++ AM
Sbjct: 28 GFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKDIFQLPFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL VT FG++FI MEIYEF HLI P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNTWLGVTFLFGLVFIGMEIYEFHHLIVEGYGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GLHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVVWICVFTVVYLLGAI 204
>gi|253687436|ref|YP_003016626.1| cytochrome o ubiquinol oxidase, subunit III [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754014|gb|ACT12090.1| cytochrome o ubiquinol oxidase, subunit III [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 204
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F F TYAVL A GP+ D+F + + V T LL SS++ AM
Sbjct: 28 GFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKDIFQLPFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL VT FG++FI MEIYEF HLI P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNAWLGVTFLFGLVFIGMEIYEFHHLIVEGYGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GLHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVVWICVFTVVYLLGAI 204
>gi|212634273|ref|YP_002310798.1| cytochrome c oxidase subunit III [Shewanella piezotolerans WP3]
gi|212555757|gb|ACJ28211.1| Cytochrome c oxidase, subunit III [Shewanella piezotolerans WP3]
Length = 223
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
T GFW+YLM+DC++FA F TYAVL N G + D+F+++ + + T+ LLLSS++
Sbjct: 30 QNTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELNFVLIETVALLLSSIT 89
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
A++ A + TV WLL+T G +FI MEIYEF HLI PQRSAFLSSFFA
Sbjct: 90 FGMALIF-AKRHNRRATVIWLLITLALGCVFIGMEIYEFHHLIEQGNGPQRSAFLSSFFA 148
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG+HGLHV GLIW+ +++I++LK GL + RL CLS+FWHFLD++WICVF+ VYL+
Sbjct: 149 LVGMHGLHVTAGLIWMVIMMIEVLKTGLNHRSITRLGCLSLFWHFLDIVWICVFTVVYLL 208
Query: 208 G 208
G
Sbjct: 209 G 209
>gi|239830889|ref|ZP_04679218.1| cytochrome o ubiquinol oxidase, subunit III [Ochrobactrum
intermedium LMG 3301]
gi|239823156|gb|EEQ94724.1| cytochrome o ubiquinol oxidase, subunit III [Ochrobactrum
intermedium LMG 3301]
Length = 209
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 5/200 (2%)
Query: 15 FYVKDKKESCVDHDG----TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
F ++ + DH T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD
Sbjct: 11 FLGGNEHPAHEDHHDAGSTTLVGFWIYLMSDCVLFSGLFATYAVLAHQFAGGPTGRELFD 70
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
++ + + T++LL+SSL+ A L S K+ + WL +T G F+ ME+YEF HLI
Sbjct: 71 LNFVLIETMLLLVSSLTYGLATL-SMFKKNRAGLLFWLGITFLLGAAFLAMEVYEFNHLI 129
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
A P RSAFLS+FFALVG HGLH+ GLIW+ VL Q+L+ GL NQ R++CLS+FW
Sbjct: 130 HEGAGPGRSAFLSAFFALVGTHGLHITSGLIWILVLSAQLLRDGLTEKNQTRVMCLSLFW 189
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD+IWI VF+ VYL+GV+
Sbjct: 190 HFLDIIWIGVFTLVYLLGVL 209
>gi|330011526|ref|ZP_08307112.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. MS
92-3]
gi|328534143|gb|EGF60778.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. MS
92-3]
Length = 181
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 5 GFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMAA 64
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 65 IA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGTH 123
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 124 GLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLSLFWHFLDVVWICVFSVVYLMGAM 181
>gi|291616542|ref|YP_003519284.1| CyoC [Pantoea ananatis LMG 20103]
gi|291151572|gb|ADD76156.1| CyoC [Pantoea ananatis LMG 20103]
gi|327392973|dbj|BAK10395.1| cytochrome o ubiquinol oxidase subunit III CyoC [Pantoea ananatis
AJ13355]
Length = 204
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 130/200 (65%), Gaps = 7/200 (3%)
Query: 17 VKDKKESCVDHD------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
VK ++ +H GFWIYLMSDC++FA F TYAV+ + A GPA D+F+
Sbjct: 6 VKHHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNSTAGGPAGKDIFE 65
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ + V T +LLLSS++ A++A K + WL +T FG FI MEIYEF HLI
Sbjct: 66 LPFVLVETALLLLSSITYGMAVIA-MNKENKGAVIGWLALTFLFGAGFIGMEIYEFHHLI 124
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
P RS FLS FF LVG HGLHV GLIW+ VL+ QI K+GL + N+ R++CLS+FW
Sbjct: 125 VEGFGPDRSGFLSGFFTLVGTHGLHVTSGLIWMAVLMFQIAKRGLNATNRTRIMCLSLFW 184
Query: 191 HFLDLIWICVFSFVYLMGVV 210
HFLD++WICVF+ VYLMG +
Sbjct: 185 HFLDVVWICVFTVVYLMGAM 204
>gi|311108451|ref|YP_003981304.1| cytochrome O ubiquinol oxidase subunit III 1 [Achromobacter
xylosoxidans A8]
gi|310763140|gb|ADP18589.1| cytochrome O ubiquinol oxidase, subunit III 1 [Achromobacter
xylosoxidans A8]
Length = 204
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSD L+F+V F T+AVL A GP ++FD+ + V T++LL SS +
Sbjct: 25 TVFGFWVYLMSDLLIFSVLFATFAVLSNATAGGPTGKELFDLKFVLVETLLLLFSSFTFG 84
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A L + + WL+VT FG FI ME+YEF HLI+ A P RSA+LS+FF L+
Sbjct: 85 MANLNVHANN-KSRAMGWLMVTFLFGAGFIAMEVYEFHHLITEGAGPGRSAYLSAFFTLI 143
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV FGLIW+ VL+ I + GL S N+RRL CLS+FWHFLD++WICVF+FVYLMG
Sbjct: 144 GTHGLHVTFGLIWIIVLLDMIRRHGLDSINKRRLACLSLFWHFLDIVWICVFTFVYLMGA 203
Query: 210 V 210
+
Sbjct: 204 L 204
>gi|170692896|ref|ZP_02884058.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia graminis
C4D1M]
gi|170142552|gb|EDT10718.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia graminis
C4D1M]
Length = 202
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 11 NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
N +L D T GFW+YLM+DC++FA F +AV+ +A GP+ D+FD
Sbjct: 3 NNTLSVSLDGGHGNHGSSDTVFGFWLYLMTDCVLFASLFAVFAVMSNQFAGGPSGKDLFD 62
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
I G+ V T LLLSS++ FAMLA A + ++WL VT G+ F+ +E+ EF+HLI
Sbjct: 63 IGGVAVETAALLLSSITYGFAMLA-ARRGKSTAVLAWLAVTFVLGLAFLALEMREFSHLI 121
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMF 189
+ A P RSAFLS+FF LVG HGLHV GL+W+ VL +QI++ +S Q RL CLS+F
Sbjct: 122 AEGAGPARSAFLSAFFTLVGTHGLHVTVGLVWMAVLAVQIVRGPGLSERQLTRLACLSLF 181
Query: 190 WHFLDLIWICVFSFVYLMGVV 210
WHFLD++WICVFSFVYL V+
Sbjct: 182 WHFLDIVWICVFSFVYLGSVL 202
>gi|238897314|ref|YP_002922991.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465069|gb|ACQ66843.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 204
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 133/202 (65%), Gaps = 10/202 (4%)
Query: 17 VKDKKESCVDHDGTY-------LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVF 69
V + S HD + GFWIYLMSDC++FA F TY VL A GP D+F
Sbjct: 5 VSQETMSTQKHDEHHENGSTKIFGFWIYLMSDCILFAALFATYVVLVNGTAGGPMGKDIF 64
Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAH 128
++ + V T +LL SS++ FA+LA + K+V+ WL +T G+ F+ MEI+EF
Sbjct: 65 NLPFVLVETFLLLFSSMTYGFAILAMNQGQ--KKSVNIWLGLTFLLGLSFVGMEIFEFHE 122
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LI A P RSAFLSSFFALVG HGLHV GLIW+ V+++QI ++GL NQ RL+CLS+
Sbjct: 123 LIGEGAGPDRSAFLSSFFALVGTHGLHVALGLIWIVVMMVQISQRGLNPINQTRLMCLSL 182
Query: 189 FWHFLDLIWICVFSFVYLMGVV 210
FWHFLD+IWICVF+ VYL+G +
Sbjct: 183 FWHFLDVIWICVFTIVYLLGAM 204
>gi|285017725|ref|YP_003375436.1| cytochrome o ubiquinol oxidase subunit III protein [Xanthomonas
albilineans GPE PC73]
gi|283472943|emb|CBA15448.1| probable cytochrome o ubiquinol oxidase subunit III protein
[Xanthomonas albilineans]
Length = 206
Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSL
Sbjct: 27 TVFGFWVYLMSDCLIFAGLFATYAVLAGATVDGPTAKELFDLKFVLVETFLLLFSSLGFG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AM+A A +R + +WL VTA G+ F+ ME+YEF HLI A P RSAFLS+FF LV
Sbjct: 87 LAMIA-AHRRSMGGLYAWLAVTAALGLGFLGMELYEFHHLIHEGAGPGRSAFLSAFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI + GL N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 146 GTHGLHVASGLLWMTVLVIQIARNGLTPRNSTRLACLSLFWHFLDVIWIGVFTIVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|114561410|ref|YP_748923.1| cytochrome c oxidase, subunit III [Shewanella frigidimarina NCIMB
400]
gi|114332703|gb|ABI70085.1| cytochrome c oxidase, subunit III [Shewanella frigidimarina NCIMB
400]
Length = 211
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 130/182 (71%), Gaps = 1/182 (0%)
Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 31 NTLFGFWIYLMTDCILFASVFATYAVLFMNTDGGVSGKDIFELDFVLIETAALLVSSITY 90
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
FAM+ + ++ T+ WLL+T G +FI ME+YEF HLI P RSAFLS+FFAL
Sbjct: 91 GFAMICARHQKKA-ATLGWLLITFALGCVFIAMEVYEFHHLIEHGNGPDRSAFLSAFFAL 149
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
VG+HGLHV GLIW+ ++++++LK GL + + RL CLS+FWHFLD++W+CVF+ VYL+G
Sbjct: 150 VGMHGLHVTAGLIWMLIMMVEVLKTGLTNRSITRLSCLSLFWHFLDIVWVCVFTVVYLLG 209
Query: 209 VV 210
V+
Sbjct: 210 VL 211
>gi|209808984|ref|YP_002264522.1| cytochrome o ubiquinol oxidase subunit III [Aliivibrio salmonicida
LFI1238]
gi|208010546|emb|CAQ80915.1| cytochrome o ubiquinol oxidase subunit III [Aliivibrio salmonicida
LFI1238]
Length = 202
Score = 190 bits (483), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F F TYAVL A GP+ D+F++ +FV T++LLLSS++ F +
Sbjct: 26 GFWIYLMSDCILFGSLFATYAVLVNATAGGPSGKDIFELPFVFVETMLLLLSSITFGFGI 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + L WLL+TA G+ FI ME+YEF HLI PQRSAFLS+FF LVG H
Sbjct: 86 IAMKREDLA-GLKRWLLITALLGLGFISMEVYEFNHLIGEGFGPQRSAFLSAFFTLVGTH 144
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL + R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 145 GLHVTFGLIWLSVCYFQLNTKGLNDLMKGRFYCLSLFWHFLDIVWICVFTIVYLLGVI 202
>gi|317403854|gb|EFV84328.1| cytochrome o ubiquinol oxidase subunit III [Achromobacter
xylosoxidans C54]
Length = 204
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSD L+F+V F T+AVL A GP ++FD+ + V T++LL SS +
Sbjct: 25 TVFGFWVYLMSDLLIFSVLFATFAVLANATAGGPTGKELFDLKFVLVETLLLLFSSFTFG 84
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A L + + WL+VT FG FI ME+YEF HLI+ A P RSA+LS+FF L+
Sbjct: 85 MANLNVHANNK-SRAIGWLMVTFLFGAGFIAMEVYEFHHLITEGAGPGRSAYLSAFFTLI 143
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV FGLIW+ V++ I + GL S N+RRL CLS+FWHFLD++WICVF+FVYL+G
Sbjct: 144 GTHGLHVTFGLIWIVVMIDMIRRHGLDSINKRRLACLSLFWHFLDIVWICVFTFVYLLGA 203
Query: 210 V 210
+
Sbjct: 204 L 204
>gi|322834053|ref|YP_004214080.1| cytochrome o ubiquinol oxidase, subunit III [Rahnella sp. Y9602]
gi|321169254|gb|ADW74953.1| cytochrome o ubiquinol oxidase, subunit III [Rahnella sp. Y9602]
Length = 204
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+F++ + V T LL SS++ FAM
Sbjct: 28 GFWIYLMSDCILFASLFATYAVLVNGTAGGPSGKDIFELPFVLVETFCLLFSSITYGFAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L K WL +T FG+ FI ME+YEF HLI+ PQRS FLS FFALV H
Sbjct: 88 LG-MNKGNKAAVNGWLFLTFLFGLGFIGMELYEFHHLIAEGYGPQRSGFLSGFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ +++Q+ ++GL N+ RL+CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GLHVTCGLIWILTMMVQVSRRGLTEVNKTRLMCLSLFWHFLDVVWICVFTVVYLMGAM 204
>gi|26987550|ref|NP_742975.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas putida
KT2440]
gi|24982223|gb|AAN66439.1|AE016273_8 cytochrome o ubiquinol oxidase, subunit III [Pseudomonas putida
KT2440]
gi|18149143|dbj|BAB83595.1| cytochrome o oxidase C [Pseudomonas putida]
Length = 207
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T+ LLLSS++
Sbjct: 28 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLFLLLSSITFG 87
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLIS PQRS FLS FFALV
Sbjct: 88 FAMLKMFDGKKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLISEGFGPQRSGFLSGFFALV 146
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 147 GTHGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 206
Query: 210 V 210
+
Sbjct: 207 L 207
>gi|148546081|ref|YP_001266183.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas putida F1]
gi|167031866|ref|YP_001667097.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas putida
GB-1]
gi|148510139|gb|ABQ76999.1| Cytochrome o ubiquinol oxidase, subunit III [Pseudomonas putida F1]
gi|166858354|gb|ABY96761.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas putida
GB-1]
Length = 208
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T+ LLLSS++
Sbjct: 29 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLFLLLSSITFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLIS PQRS FLS FFALV
Sbjct: 89 FAMLKMFDGKKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLISEGFGPQRSGFLSGFFALV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 148 GTHGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|289662731|ref|ZP_06484312.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. vasculorum NCPPB702]
Length = 210
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 130/198 (65%), Gaps = 4/198 (2%)
Query: 16 YVKDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+ + HDG T GFW+YLMSDCL+FA F TYAVL GP ++FD+
Sbjct: 14 HAGGQDHDHEHHDGGGNTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLK 73
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ V T +LL SSLS FAM+A A KR + WL VTA G+ F+ ME++EF HLI
Sbjct: 74 FVLVETFLLLFSSLSFGFAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHE 132
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
A P RSAFLS+FF LVG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHF
Sbjct: 133 GAGPSRSAFLSAFFTLVGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHF 192
Query: 193 LDLIWICVFSFVYLMGVV 210
LD+IWI VF+ VYL+G +
Sbjct: 193 LDIIWIGVFTVVYLLGAL 210
>gi|295096782|emb|CBK85872.1| cytochrome bo3 quinol oxidase subunit 3 [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 204
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ QI ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMFQISRRGLTSTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204
>gi|170723535|ref|YP_001751223.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas putida
W619]
gi|169761538|gb|ACA74854.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas putida
W619]
Length = 207
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T+ LLLSS++
Sbjct: 28 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLFLLLSSITFG 87
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLI+ PQRS FLS FFALV
Sbjct: 88 FAMLKMFDGKKA-GVLGWLAVTFLFGAAFIAMEIYEFHHLIAEGYGPQRSGFLSGFFALV 146
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 147 GTHGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 206
Query: 210 V 210
+
Sbjct: 207 L 207
>gi|332307457|ref|YP_004435308.1| cytochrome o ubiquinol oxidase, subunit III [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174786|gb|AEE24040.1| cytochrome o ubiquinol oxidase, subunit III [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 215
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 127/179 (70%), Gaps = 1/179 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F TYAVL N G + D+FD++ + V T LL+SS++
Sbjct: 36 TLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFDLNFVLVETAALLVSSITYG 95
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FA+L A K+ T+ WLLVT G +FI ME+YEF HLI P SAFLSSFFALV
Sbjct: 96 FALLC-AHKQQKAGTLLWLLVTMALGCVFIAMEVYEFHHLIVEGNGPDGSAFLSSFFALV 154
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G+HGLHV GLIW+ V+V ++LK+GL + RL CLS+FWHFLD++W+CVFS VYL+G
Sbjct: 155 GMHGLHVTAGLIWMLVMVFEVLKRGLGAQTVTRLGCLSLFWHFLDIVWVCVFSVVYLLG 213
>gi|261341031|ref|ZP_05968889.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter
cancerogenus ATCC 35316]
gi|288316896|gb|EFC55834.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter
cancerogenus ATCC 35316]
Length = 204
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMFQVSRRGLTSTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204
>gi|170724798|ref|YP_001758824.1| cytochrome o ubiquinol oxidase subunit III [Shewanella woodyi ATCC
51908]
gi|169810145|gb|ACA84729.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella woodyi ATCC
51908]
Length = 215
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 138/211 (65%), Gaps = 4/211 (1%)
Query: 3 RQKIG---KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY 59
R +G + ++ + + E + T GFW+YLM+DC++FA F TYAVL N
Sbjct: 6 RANLGVADANKHYDVSHATSHDEHHDTSENTLFGFWLYLMTDCILFASVFATYAVLYMNT 65
Query: 60 AAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFI 119
G + D+F+++ + + T LL+SS++ FA++ + ++ T+ WLL+T G FI
Sbjct: 66 DGGVSGKDIFELNFVLIETAALLVSSITFGFALICAKHQKKA-ATLGWLLITFALGCAFI 124
Query: 120 IMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179
MEIYEF HLI PQRSAFLSSFFALVG+HGLHV GL+W+ +++ ++LK GL +
Sbjct: 125 GMEIYEFHHLIEHGNGPQRSAFLSSFFALVGMHGLHVTAGLVWMAIMMFEVLKTGLNKRS 184
Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
RL CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 185 ITRLGCLSLFWHFLDIVWICVFTVVYLLGAM 215
>gi|253990903|ref|YP_003042259.1| cytochrome o ubiquinol oxidase subunit III [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782353|emb|CAQ85517.1| cyoC; Cytochrome O ubiquinol oxidase subunit III (Ubiquinol oxidase
chain C) [Photorhabdus asymbiotica]
Length = 206
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ ++F +S + V T +LL SS++ FAM
Sbjct: 30 GFWIYLMSDCILFACLFATYAVLVNGTAGGPSGKEIFGLSFVLVETFLLLFSSITYGFAM 89
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L K I + +WL +T FG+ F+ ME+YEF HLI+ P RSAFLS FFALV H
Sbjct: 90 LG-MNKGKIGQVNAWLGMTFLFGLGFVAMELYEFHHLIAEGHGPDRSAFLSGFFALVATH 148
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GL+W+ +++IQ+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 149 GIHVTCGLVWIIIMMIQVTRRGLTDVNKTRLNCLSLFWHFLDVVWICVFTVVYLLGAM 206
>gi|104780179|ref|YP_606677.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas entomophila
L48]
gi|95109166|emb|CAK13863.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas entomophila
L48]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T LLLSS++
Sbjct: 28 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVLVETAFLLLSSITFG 87
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLI+ PQRS FLS+FFALV
Sbjct: 88 FAMLKMFDGKKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLIAEGFGPQRSGFLSAFFALV 146
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 147 GTHGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 206
Query: 210 V 210
+
Sbjct: 207 L 207
>gi|85058643|ref|YP_454345.1| cytochrome o ubiquinol oxidase subunit III [Sodalis glossinidius
str. 'morsitans']
gi|84779163|dbj|BAE73940.1| cytochrome o ubiquinol oxidase subunit III [Sodalis glossinidius
str. 'morsitans']
Length = 204
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL + A GP D+F++ + V T LL SS++ A+
Sbjct: 28 GFWIYLMSDCILFATLFATYAVLSNSVAGGPTGKDIFELPFVLVETFFLLFSSITYGMAI 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + WL +T FG+ FI ME+YEF HLI+ P RSAFLS FF LVG H
Sbjct: 88 LA-MYRGYKSRVNVWLGMTFLFGLGFICMELYEFHHLIAEGYGPDRSAFLSGFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ V+++Q+ ++GL NQ RL CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 147 GLHVTSGLIWILVMMVQVSRRGLTPVNQTRLQCLSLFWHFLDVVWICVFTVVYLMGAL 204
>gi|17988182|ref|NP_540816.1| cytochrome O ubiquinol oxidase subunit III [Brucella melitensis bv.
1 str. 16M]
gi|256045834|ref|ZP_05448710.1| cytochrome O ubiquinol oxidase subunit III [Brucella melitensis bv.
1 str. Rev.1]
gi|260563125|ref|ZP_05833611.1| cytochrome c oxidase [Brucella melitensis bv. 1 str. 16M]
gi|265992248|ref|ZP_06104805.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv.
1 str. Rev.1]
gi|17983943|gb|AAL53080.1| cytochrome o ubiquinol oxidase subunit iii [Brucella melitensis bv.
1 str. 16M]
gi|260153141|gb|EEW88233.1| cytochrome c oxidase [Brucella melitensis bv. 1 str. 16M]
gi|263003314|gb|EEZ15607.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv.
1 str. Rev.1]
Length = 209
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ +
Sbjct: 15 NDHPAHEDHHDAGSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFV 74
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T++LL+SSL+ A L S K + WL VT G F++MEIYEF HLI A
Sbjct: 75 LVETMLLLVSSLTHGLATL-SMYKNNRSGVLGWLGVTFLLGAAFLVMEIYEFHHLIVEGA 133
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD
Sbjct: 134 GPDRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLD 193
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+ VYL+GV+
Sbjct: 194 IIWIGVFTLVYLLGVL 209
>gi|8134388|sp|Q9WWR3|CYOC_PSEPU RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III
gi|4586339|dbj|BAA76358.1| cytochrome o ubiquinol oxidase C [Pseudomonas putida]
Length = 207
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T+ LLLSS++
Sbjct: 28 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLFLLLSSITFG 87
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLI+ PQRS FLS FFALV
Sbjct: 88 FAMLKMFDGKKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLIAEGFGPQRSGFLSGFFALV 146
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 147 GTHGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 206
Query: 210 V 210
+
Sbjct: 207 L 207
>gi|330859962|emb|CBX70291.1| cytochrome o ubiquinol oxidase subunit 3 [Yersinia enterocolitica
W22703]
Length = 198
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 123/172 (71%), Gaps = 1/172 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AM
Sbjct: 28 GFWIYLMSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVLVETFLLLFSSITYGIAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L K ++ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV H
Sbjct: 88 LG-MNKGHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
G+HV GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ V
Sbjct: 147 GIHVTAGLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDVVWICVFTVV 198
>gi|90409891|ref|ZP_01217908.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium
profundum 3TCK]
gi|90329244|gb|EAS45501.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium
profundum 3TCK]
Length = 211
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ D+FD+ +F T++LL SS++ F +
Sbjct: 35 GFWIYLMSDCILFASLFATYAVLVNGIAGGPSGKDIFDLPFVFTETMLLLFSSITFGFGI 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + WL +T FG+ FI ME++EF HLI+ PQRSAFLS+FF LVG H
Sbjct: 95 IA-MKRNDVAGLKRWLAITFLFGLSFIAMELWEFHHLINEGFGPQRSAFLSAFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIWL V Q+ KGL S Q R CLS+FWHFLD++WICVF+ VYL+GVV
Sbjct: 154 GLHVTAGLIWLSVCYYQVSTKGLTSMMQTRFYCLSLFWHFLDIVWICVFTIVYLLGVV 211
>gi|146310558|ref|YP_001175632.1| cytochrome o ubiquinol oxidase subunit III [Enterobacter sp. 638]
gi|145317434|gb|ABP59581.1| cytochrome bo3 quinol oxidase subunit 3 [Enterobacter sp. 638]
Length = 204
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETGLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI MEIYEF HLI+ P RS FLS+FFALVG H
Sbjct: 88 IA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIAEGFGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ ++GL + N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 147 GLHVTSGLIWMAVLMFQVYRRGLTNTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204
>gi|307725995|ref|YP_003909208.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia sp.
CCGE1003]
gi|307586520|gb|ADN59917.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp.
CCGE1003]
Length = 202
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 130/193 (67%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
D T GFW+YLM+DC++FA F +AV+ +A GP+ ++FDISG+ V T
Sbjct: 11 DGGHGNHGSSDTVFGFWLYLMTDCVLFASLFAVFAVMSNQFAGGPSGKELFDISGVAVET 70
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
LLLSS++ FAMLA A + + WL VT G+ F+++E+ EF+HLI+ A P R
Sbjct: 71 AALLLSSITYGFAMLA-ARRGKSAAVLGWLAVTFALGLAFLVLEMREFSHLIAEGAGPGR 129
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIW 197
SAFLS+FF LVG HGLHV GL+W+ VL +Q+++ +S + RL CLS+FWHFLD++W
Sbjct: 130 SAFLSAFFTLVGTHGLHVTVGLVWMAVLAVQVVRAPKLSERELTRLACLSLFWHFLDIVW 189
Query: 198 ICVFSFVYLMGVV 210
ICVFSFVYL V+
Sbjct: 190 ICVFSFVYLGSVL 202
>gi|22124926|ref|NP_668349.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis KIM 10]
gi|45440614|ref|NP_992153.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar
Microtus str. 91001]
gi|51595300|ref|YP_069491.1| cytochrome o ubiquinol oxidase subunit III [Yersinia
pseudotuberculosis IP 32953]
gi|108808651|ref|YP_652567.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Antiqua]
gi|108811090|ref|YP_646857.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Nepal516]
gi|145600060|ref|YP_001164136.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Pestoides F]
gi|149364988|ref|ZP_01887023.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
CA88-4125]
gi|153950151|ref|YP_001402060.1| cytochrome O ubiquinol oxidase subunit III [Yersinia
pseudotuberculosis IP 31758]
gi|162418305|ref|YP_001607428.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Angola]
gi|165926547|ref|ZP_02222379.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165935983|ref|ZP_02224553.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010997|ref|ZP_02231895.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213115|ref|ZP_02239150.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167398830|ref|ZP_02304354.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421497|ref|ZP_02313250.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423092|ref|ZP_02314845.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469783|ref|ZP_02334487.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis FV-1]
gi|170025460|ref|YP_001721965.1| cytochrome o ubiquinol oxidase subunit III [Yersinia
pseudotuberculosis YPIII]
gi|186894317|ref|YP_001871429.1| cytochrome o ubiquinol oxidase subunit III [Yersinia
pseudotuberculosis PB1/+]
gi|218930196|ref|YP_002348071.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis CO92]
gi|229838771|ref|ZP_04458930.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229896075|ref|ZP_04511245.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Pestoides A]
gi|229899339|ref|ZP_04514482.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901317|ref|ZP_04516439.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Nepal516]
gi|270489505|ref|ZP_06206579.1| putative quinol oxidase, subunit 3 [Yersinia pestis KIM D27]
gi|21957764|gb|AAM84600.1|AE013705_3 cytochrome o ubiquinol oxidase subunit III [Yersinia pestis KIM 10]
gi|45435471|gb|AAS61030.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis biovar
Microtus str. 91001]
gi|51588582|emb|CAH20190.1| cytochrome o ubiquinol oxidase subunit III [Yersinia
pseudotuberculosis IP 32953]
gi|108774738|gb|ABG17257.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
Nepal516]
gi|108780564|gb|ABG14622.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
Antiqua]
gi|115348807|emb|CAL21761.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis CO92]
gi|145211756|gb|ABP41163.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
Pestoides F]
gi|149291401|gb|EDM41475.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
CA88-4125]
gi|152961646|gb|ABS49107.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia
pseudotuberculosis IP 31758]
gi|162351120|gb|ABX85068.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis
Angola]
gi|165916128|gb|EDR34735.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921475|gb|EDR38672.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989997|gb|EDR42298.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205902|gb|EDR50382.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166960416|gb|EDR56437.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051334|gb|EDR62742.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057262|gb|EDR67008.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751994|gb|ACA69512.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia
pseudotuberculosis YPIII]
gi|186697343|gb|ACC87972.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia
pseudotuberculosis PB1/+]
gi|229681246|gb|EEO77340.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Nepal516]
gi|229687741|gb|EEO79814.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695137|gb|EEO85184.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229700998|gb|EEO89027.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis
Pestoides A]
gi|270338009|gb|EFA48786.1| putative quinol oxidase, subunit 3 [Yersinia pestis KIM D27]
gi|320016353|gb|ADV99924.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 204
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL A GP+ ++FD++ + V T +LL SS++ AM
Sbjct: 28 GFWVYLMSDCILFATLFATYAVLVNGTAGGPSGKELFDLNFVLVETFLLLFSSITYGVAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L +K + + +WL T FG+ FI ME+YEF LI P RS FLS++FALVG H
Sbjct: 88 LG-MSKGSVKQVNTWLGFTFLFGLGFIAMELYEFHKLIEEGYGPARSGFLSAYFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL W+ +++IQ+ ++GL S N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GLHVTAGLAWIIIMMIQVARRGLNSTNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAI 204
>gi|186472797|ref|YP_001860139.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum
STM815]
gi|184195129|gb|ACC73093.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum
STM815]
Length = 201
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 26 DH--DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH + GFW+YLM+DC++FA F T+AV+ +A GP+ D+F+I G+ + T +LL
Sbjct: 15 DHAPSNSVFGFWLYLMTDCILFAALFATFAVMSHQFAGGPSGKDLFEIEGVAIETAILLF 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAML A K T+ WL VT G F+++EI EF+HLI+ A P RSAFLS
Sbjct: 75 SSITYGFAMLG-AHKNNKSSTLFWLAVTFVLGASFVVLEIREFSHLIAEGAGPDRSAFLS 133
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFS 202
+FF LVG HGLHV GL+W+ V++IQ+++ + + RRL CLS+FWHFLD++WI VFS
Sbjct: 134 AFFTLVGTHGLHVTSGLVWMIVMMIQVVRAPALGERELRRLTCLSLFWHFLDIVWIGVFS 193
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 194 FVYLASVI 201
>gi|187477293|ref|YP_785317.1| cytochrome O ubiquinol oxidase subunit III [Bordetella avium 197N]
gi|115421879|emb|CAJ48398.1| cytochrome O ubiquinol oxidase subunit III [Bordetella avium 197N]
Length = 204
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 129/181 (71%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSD L+F+V F T+AVL A GP D+FD++ + V T++LL+SS +
Sbjct: 25 TVFGFWVYLMSDLLIFSVLFATFAVLSGATAGGPTGRDLFDLNFVLVETMLLLISSFTFG 84
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AML + +K ++WL++T G FI ME+YEF HLI A P RSA+LSSFF LV
Sbjct: 85 VAMLNMYAGK-TNKVIAWLVITFILGAGFIAMELYEFQHLIHQGAGPDRSAYLSSFFFLV 143
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ +++I + + GL + N+RRL CLS+FWHFLD++WICVF+FVYLMG
Sbjct: 144 GTHGLHVTAGLLWIIIMIIMVCRHGLDATNKRRLACLSLFWHFLDIVWICVFTFVYLMGA 203
Query: 210 V 210
+
Sbjct: 204 I 204
>gi|167566668|ref|ZP_02359584.1| ubiquinol oxidase, subunit III [Burkholderia oklahomensis EO147]
Length = 202
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 130/194 (67%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
++ DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 HHQAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVAIE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R + WL VT G F+ +E+ EF+H+I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-SALLGWLAVTFVLGAAFLGLELREFSHMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q ++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLAFQATRRPALTERDIRRLSCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVF+FVYL V+
Sbjct: 189 WICVFTFVYLASVI 202
>gi|315646200|ref|ZP_07899320.1| quinol oxidase polypeptide III [Paenibacillus vortex V453]
gi|315278399|gb|EFU41715.1| quinol oxidase polypeptide III [Paenibacillus vortex V453]
Length = 208
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 120/177 (67%), Gaps = 1/177 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLM+D ++F F TY VL +N GP P D+F + GI ST +LL SS +C A+
Sbjct: 32 GFWIYLMTDVIIFGTLFATYIVLQQNTDGGPGPADLFQMGGIITSTFILLASSYTCGLAL 91
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L S K + +SWL VTA G IFI MEI EF HL+ A SAFLS+FF LVG H
Sbjct: 92 L-SMHKHNVKGLISWLAVTAGLGAIFIGMEIAEFNHLVHEGATIGTSAFLSAFFTLVGTH 150
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV FGL+W+ L+IQ+ K+G+ +R++ +S+FWHFLD++WI VF+ VYLMGV
Sbjct: 151 GLHVLFGLVWMIALIIQLAKRGITPVTKRKVNVISLFWHFLDVVWIFVFTVVYLMGV 207
>gi|34499449|ref|NP_903664.1| cytochrome o ubiquinol oxidase subunit III [Chromobacterium
violaceum ATCC 12472]
gi|34105301|gb|AAQ61656.1| cytochrome o ubiquinol oxidase, subunit III [Chromobacterium
violaceum ATCC 12472]
Length = 203
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW YLM+DC++FA F TYAVL +N A G + D+FD+ + V T LLLSS++
Sbjct: 24 TVLGFWFYLMTDCILFATAFATYAVLFRNVAEGVSGKDIFDLQYVLVETAALLLSSITYG 83
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A K + WL VT FG FI MEI EF HLIS PQ+SAFLS+FF LV
Sbjct: 84 FAMIA-GHKGNKSAVLGWLAVTFLFGAAFIGMEINEFHHLISEGHGPQKSAFLSAFFGLV 142
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHGLHV GL+W+ V++ ++ K GL RL CLS+FWHFLD++WICVF+ VYL G
Sbjct: 143 GLHGLHVTAGLLWMGVMMAEVAKTGLTGRAMTRLNCLSLFWHFLDIVWICVFTVVYLKGA 202
Query: 210 V 210
+
Sbjct: 203 M 203
>gi|37527737|ref|NP_931082.1| cytochrome o ubiquinol oxidase subunit III [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36787173|emb|CAE16249.1| cytochrome O ubiquinol oxidase subunit III (ubiquinol oxidase chain
C) [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 204
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 124/176 (70%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP+ ++F +S + V T +LL SS++ FAM
Sbjct: 28 GFWIYLMSDCILFACLFATYAVLVNGTAGGPSGKEIFGLSFVLVETFLLLFSSITYGFAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L K I + +WL +T FG+ F+ ME+YEF HLI P RSAFLS FFALV H
Sbjct: 88 LG-MNKGKIGQVNAWLGMTFLFGLGFVAMELYEFHHLIVDGHGPDRSAFLSGFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G+HV GL+W+ +++IQ+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 147 GIHVTCGLVWIIIMIIQVTRRGLTDVNKTRLNCLSLFWHFLDVVWICVFTVVYLLG 202
>gi|167743746|ref|ZP_02416520.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 14]
Length = 202
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLSLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 189 WICVFSFVYLASVI 202
>gi|290474674|ref|YP_003467554.1| cytochrome o ubiquinol oxidase subunit III [Xenorhabdus bovienii
SS-2004]
gi|289173987|emb|CBJ80774.1| cytochrome o ubiquinol oxidase, subunit III [Xenorhabdus bovienii
SS-2004]
Length = 203
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSD ++FA F TYAVL A GP+ D+F++ + V T +LL SS++ FAM
Sbjct: 27 GFWIYLMSDLVLFASLFATYAVLANGTAGGPSGKDIFELPFVLVETFLLLFSSITYGFAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L S K + WL +T FG+ F+ MEIYEF LIS P RSAFLSSFFALV H
Sbjct: 87 L-SMNKGKTGQVNLWLFITFLFGLGFVSMEIYEFHKLISEGFGPDRSAFLSSFFALVATH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ ++++Q+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 146 GIHVTCGLIWIIIMMVQVARRGLTEVNRTRLSCLSLFWHFLDVVWICVFTVVYLMGAM 203
>gi|23500959|ref|NP_697086.1| ubiquinol oxidase subunit III [Brucella suis 1330]
gi|161618034|ref|YP_001591921.1| cytochrome o ubiquinol oxidase, subunit III [Brucella canis ATCC
23365]
gi|163842320|ref|YP_001626724.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis ATCC
23445]
gi|225851587|ref|YP_002731820.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis
ATCC 23457]
gi|254690356|ref|ZP_05153610.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 6
str. 870]
gi|254694845|ref|ZP_05156673.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 3
str. Tulya]
gi|254700859|ref|ZP_05162687.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis bv. 5
str. 513]
gi|254705225|ref|ZP_05167053.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis bv. 3
str. 686]
gi|254707256|ref|ZP_05169084.1| cytochrome o ubiquinol oxidase, subunit III [Brucella pinnipedialis
M163/99/10]
gi|254709203|ref|ZP_05171014.1| cytochrome o ubiquinol oxidase, subunit III [Brucella pinnipedialis
B2/94]
gi|254713372|ref|ZP_05175183.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti
M644/93/1]
gi|254716270|ref|ZP_05178081.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti
M13/05/1]
gi|254718264|ref|ZP_05180075.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. 83/13]
gi|256030727|ref|ZP_05444341.1| cytochrome o ubiquinol oxidase, subunit III [Brucella pinnipedialis
M292/94/1]
gi|256060187|ref|ZP_05450367.1| cytochrome o ubiquinol oxidase, subunit III [Brucella neotomae
5K33]
gi|256112551|ref|ZP_05453472.1| cytochrome o ubiquinol oxidase, subunit III [Brucella melitensis
bv. 3 str. Ether]
gi|256158734|ref|ZP_05456609.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti
M490/95/1]
gi|256254131|ref|ZP_05459667.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti B1/94]
gi|256258610|ref|ZP_05464146.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 9
str. C68]
gi|256264902|ref|ZP_05467434.1| cytochrome c oxidase [Brucella melitensis bv. 2 str. 63/9]
gi|256368510|ref|YP_003106016.1| cytochrome o ubiquinol oxidase subunit III [Brucella microti CCM
4915]
gi|260169630|ref|ZP_05756441.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. F5/99]
gi|260567308|ref|ZP_05837778.1| cytochrome c oxidase [Brucella suis bv. 4 str. 40]
gi|260755900|ref|ZP_05868248.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 6
str. 870]
gi|260884924|ref|ZP_05896538.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 9
str. C68]
gi|261215175|ref|ZP_05929456.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 3
str. Tulya]
gi|261218047|ref|ZP_05932328.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M13/05/1]
gi|261221274|ref|ZP_05935555.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti B1/94]
gi|261314738|ref|ZP_05953935.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis
M163/99/10]
gi|261316704|ref|ZP_05955901.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis
B2/94]
gi|261321103|ref|ZP_05960300.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti
M644/93/1]
gi|261324164|ref|ZP_05963361.1| cytochrome o ubiquinol oxidase subunit III [Brucella neotomae 5K33]
gi|261751369|ref|ZP_05995078.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 5
str. 513]
gi|261755934|ref|ZP_05999643.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 3
str. 686]
gi|261759160|ref|ZP_06002869.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. F5/99]
gi|265983225|ref|ZP_06095960.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. 83/13]
gi|265987774|ref|ZP_06100331.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis
M292/94/1]
gi|265993991|ref|ZP_06106548.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv.
3 str. Ether]
gi|265997235|ref|ZP_06109792.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti
M490/95/1]
gi|294851453|ref|ZP_06792126.1| cytochrome o ubiquinol oxidase [Brucella sp. NVSL 07-0026]
gi|297247449|ref|ZP_06931167.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 5
str. B3196]
gi|306840007|ref|ZP_07472801.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. NF 2653]
gi|306843644|ref|ZP_07476245.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO1]
gi|23346816|gb|AAN29001.1| ubiquinol oxidase subunit III [Brucella suis 1330]
gi|161334845|gb|ABX61150.1| cytochrome o ubiquinol oxidase, subunit III [Brucella canis ATCC
23365]
gi|163673043|gb|ABY37154.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis ATCC
23445]
gi|225639952|gb|ACN99865.1| cytochrome o ubiquinol oxidase, subunit III [Brucella melitensis
ATCC 23457]
gi|255998668|gb|ACU47067.1| cytochrome o ubiquinol oxidase subunit III [Brucella microti CCM
4915]
gi|260156826|gb|EEW91906.1| cytochrome c oxidase [Brucella suis bv. 4 str. 40]
gi|260676008|gb|EEX62829.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 6
str. 870]
gi|260874452|gb|EEX81521.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 9
str. C68]
gi|260916782|gb|EEX83643.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 3
str. Tulya]
gi|260919858|gb|EEX86511.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti B1/94]
gi|260923136|gb|EEX89704.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M13/05/1]
gi|261293793|gb|EEX97289.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti
M644/93/1]
gi|261295927|gb|EEX99423.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis
B2/94]
gi|261300144|gb|EEY03641.1| cytochrome o ubiquinol oxidase subunit III [Brucella neotomae 5K33]
gi|261303764|gb|EEY07261.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis
M163/99/10]
gi|261739144|gb|EEY27140.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. F5/99]
gi|261741122|gb|EEY29048.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 5
str. 513]
gi|261745687|gb|EEY33613.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 3
str. 686]
gi|262551703|gb|EEZ07693.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti
M490/95/1]
gi|262764972|gb|EEZ10893.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv.
3 str. Ether]
gi|263095387|gb|EEZ18988.1| cytochrome c oxidase [Brucella melitensis bv. 2 str. 63/9]
gi|264659971|gb|EEZ30232.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis
M292/94/1]
gi|264661817|gb|EEZ32078.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. 83/13]
gi|294820042|gb|EFG37041.1| cytochrome o ubiquinol oxidase [Brucella sp. NVSL 07-0026]
gi|297174618|gb|EFH33965.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 5
str. B3196]
gi|306276335|gb|EFM58035.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO1]
gi|306404971|gb|EFM61256.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. NF 2653]
gi|326408056|gb|ADZ65121.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis
M28]
gi|326537772|gb|ADZ85987.1| cytochrome o ubiquinol oxidase, subunit III [Brucella melitensis
M5-90]
Length = 209
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ +
Sbjct: 15 NDHPAHEDHHDAGSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFV 74
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T++LL+SSL+ A L S K + WL VT G F+ MEIYEF HLI A
Sbjct: 75 LVETMLLLVSSLTYGLATL-SMYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGA 133
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD
Sbjct: 134 GPDRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLD 193
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+ VYL+GV+
Sbjct: 194 IIWIGVFTLVYLLGVL 209
>gi|33595746|ref|NP_883389.1| cytochrome O ubiquinol oxidase [Bordetella parapertussis 12822]
gi|33565825|emb|CAE36370.1| cytochrome O ubiquinol oxidase [Bordetella parapertussis]
Length = 203
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 130/183 (71%), Gaps = 5/183 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFWIYLMSD L+F+V F T+AVL A GP D+FD+S + T++LL+SS +
Sbjct: 24 TVLGFWIYLMSDLLIFSVLFATFAVLSSATAGGPTGKDLFDLSFVLGETMLLLVSSFTFG 83
Query: 90 FAMLA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
AML + +K K ++WL VT FG FI+ME+YEF HL+S+ A PQ SA+LS+FF
Sbjct: 84 MAMLNLHAGSKG---KVIAWLWVTFLFGAGFIVMEVYEFHHLLSIGAGPQTSAYLSAFFT 140
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+G HGLHV FGLIW+ V++ + + G+ RRL CLS+FWHFLD++WICVF+FVYL+
Sbjct: 141 LIGTHGLHVTFGLIWILVMIHMLSRYGIDPITTRRLSCLSLFWHFLDIVWICVFTFVYLL 200
Query: 208 GVV 210
G +
Sbjct: 201 GAL 203
>gi|33593869|ref|NP_881513.1| cytochrome O ubiquinol oxidase [Bordetella pertussis Tohama I]
gi|33600271|ref|NP_887831.1| cytochrome O ubiquinol oxidase [Bordetella bronchiseptica RB50]
gi|33563942|emb|CAE43203.1| cytochrome O ubiquinol oxidase [Bordetella pertussis Tohama I]
gi|33567869|emb|CAE31783.1| cytochrome O ubiquinol oxidase [Bordetella bronchiseptica RB50]
gi|332383288|gb|AEE68135.1| cytochrome O ubiquinol oxidase [Bordetella pertussis CS]
Length = 203
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 130/183 (71%), Gaps = 5/183 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFWIYLMSD L+F+V F T+AVL A GP D+FD+S + T++LL+SS +
Sbjct: 24 TVLGFWIYLMSDLLIFSVLFATFAVLSSATAGGPTGKDLFDLSFVLGETMLLLVSSFTFG 83
Query: 90 FAMLA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
AML + +K K ++WL VT FG FI+ME+YEF HL+S+ A PQ SA+LS+FF
Sbjct: 84 MAMLNLHAGSKG---KVIAWLWVTFLFGAGFIVMEVYEFHHLLSIGAGPQTSAYLSAFFT 140
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+G HGLHV FGLIW+ V++ + + G+ RRL CLS+FWHFLD++WICVF+FVYL+
Sbjct: 141 LIGTHGLHVTFGLIWILVMIHMLSRYGIDPITTRRLSCLSLFWHFLDIVWICVFTFVYLL 200
Query: 208 GVV 210
G +
Sbjct: 201 GAL 203
>gi|306842663|ref|ZP_07475308.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO2]
gi|306287198|gb|EFM58695.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO2]
Length = 209
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ +
Sbjct: 15 NDHPAHEDHHDAGSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFV 74
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T++LL+SSL+ A L S K + WL VT G F+ MEIYEF HLI A
Sbjct: 75 LVETMLLLVSSLTYGLATL-SMYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGA 133
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD
Sbjct: 134 GPDRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLD 193
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+ VYL+GV+
Sbjct: 194 IIWIGVFTLVYLLGVL 209
>gi|62289031|ref|YP_220824.1| ubiquinol oxidase subunit III [Brucella abortus bv. 1 str. 9-941]
gi|82698968|ref|YP_413542.1| cytochrome c oxidase subunit III [Brucella melitensis biovar
Abortus 2308]
gi|189023306|ref|YP_001934074.1| Cytochrome c oxidase, subunit III [Brucella abortus S19]
gi|237814518|ref|ZP_04593516.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus str.
2308 A]
gi|254696474|ref|ZP_05158302.1| Cytochrome c oxidase, subunit III [Brucella abortus bv. 2 str.
86/8/59]
gi|254731386|ref|ZP_05189964.1| Cytochrome c oxidase, subunit III [Brucella abortus bv. 4 str. 292]
gi|260546325|ref|ZP_05822065.1| cytochrome c oxidase [Brucella abortus NCTC 8038]
gi|260759124|ref|ZP_05871472.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 4
str. 292]
gi|260760849|ref|ZP_05873192.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 2
str. 86/8/59]
gi|62195163|gb|AAX73463.1| ubiquinol oxidase subunit III [Brucella abortus bv. 1 str. 9-941]
gi|82615069|emb|CAJ09997.1| Cytochrome c oxidase, subunit III [Brucella melitensis biovar
Abortus 2308]
gi|189018878|gb|ACD71600.1| Cytochrome c oxidase, subunit III [Brucella abortus S19]
gi|237789355|gb|EEP63565.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus str.
2308 A]
gi|260096432|gb|EEW80308.1| cytochrome c oxidase [Brucella abortus NCTC 8038]
gi|260669442|gb|EEX56382.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 4
str. 292]
gi|260671281|gb|EEX58102.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 2
str. 86/8/59]
Length = 209
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 127/196 (64%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ +
Sbjct: 15 NDHPAHEDHHDAGSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFV 74
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T++LL+SSL+ A L S K + WL VT G F+ MEIYEF HLI A
Sbjct: 75 LVETMLLLVSSLTYGLATL-SMYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGA 133
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD
Sbjct: 134 GPDRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLD 193
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+ VYL+GV+
Sbjct: 194 IIWIGVFTLVYLLGVL 209
>gi|312961437|ref|ZP_07775940.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens WH6]
gi|311284332|gb|EFQ62910.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens WH6]
Length = 204
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLM+DC++FA F YAVL + A GP+ +D+F++ + T++LLLSS++ +AM
Sbjct: 28 GFWIYLMTDCILFATLFAGYAVLRDSVAGGPSSVDIFELPYVLGETMLLLLSSITYGYAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + H + WL +T G FI MEI EF HLI P RSAFL++FF LVG H
Sbjct: 88 LAMNRGQQGH-VLRWLGLTFVLGAGFIAMEINEFHHLIEAGHGPDRSAFLTAFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G HV GL+W+ VL+ Q+ ++GL + N RL CLS+FWHFLD++WICVF+ VYL+GVV
Sbjct: 147 GAHVLTGLVWMAVLMAQVHQRGLTTTNATRLSCLSLFWHFLDVVWICVFTVVYLLGVV 204
>gi|254193615|ref|ZP_04900047.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei S13]
gi|169650366|gb|EDS83059.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei S13]
Length = 197
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLSLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|262396850|ref|YP_003288703.1| cytochrome O ubiquinol oxidase subunit III [Vibrio sp. Ex25]
gi|262340444|gb|ACY54238.1| cytochrome O ubiquinol oxidase subunit III [Vibrio sp. Ex25]
Length = 200
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL N AGP D+F++ +FV T++LL SS++ F +
Sbjct: 24 GFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKDIFELPFVFVETMLLLFSSITFGFGI 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + W+LVT FG+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 84 IA-MKRNNVAGLKRWMLVTFAFGLGFICMEVYEFHHLIEEGYGPQTSAFLSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 143 GLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLLGVM 200
>gi|89072119|ref|ZP_01158715.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium sp.
SKA34]
gi|89052220|gb|EAR57671.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium sp.
SKA34]
Length = 198
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 25 VDHDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVL 81
HD T + GFWIYLMSDC++FA F TYAVL + AGP D+F++ +FV T++L
Sbjct: 11 THHDTTGIKLFGFWIYLMSDCVLFATLFATYAVLESSSIAGPTGQDIFELPFVFVETMLL 70
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
L SS++ F M+ S + I WL VT G+ FI ME+YEF HLI PQ SAF
Sbjct: 71 LFSSITFGFGMI-SMKRNKITVFKRWLQVTFLLGLSFICMELYEFHHLIENGNGPQGSAF 129
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
LS+FF LVG HGLHV FGLIW+ V Q+ KGL R CLS+FWHFLD++WICVF
Sbjct: 130 LSAFFTLVGTHGLHVTFGLIWMVVCYQQLSSKGLTENMSMRFQCLSLFWHFLDIVWICVF 189
Query: 202 SFVYLMGVV 210
+ VYLMGV+
Sbjct: 190 TIVYLMGVM 198
>gi|227113458|ref|ZP_03827114.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 204
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F F TYAVL A GP+ ++F + + V T LL SS++ AM
Sbjct: 28 GFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKELFQLPFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL VT FG++FI MEIYEF HLI P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNTWLGVTFLFGLVFIGMEIYEFHHLIVEGYGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GIHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 204
>gi|84386635|ref|ZP_00989661.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio splendidus
12B01]
gi|84378441|gb|EAP95298.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio splendidus
12B01]
Length = 205
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 127/207 (61%), Gaps = 3/207 (1%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
Q S + L + D + GFW+YLMSDC++FA F TYAVL AGP
Sbjct: 2 QANTPSHTYDLAHSHDHHHEAAGNK--LFGFWVYLMSDCVLFATLFATYAVLESGSIAGP 59
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
D+F++ +FV T++LL SS++ F M+A K + W+ VT G+ FI ME+
Sbjct: 60 TGKDIFELPFVFVETMMLLFSSITFGFGMIAMKRKDVT-GLKRWIKVTFALGLAFICMEV 118
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEF HLI+ PQ SAFLS+FF LVG HGLHV FGLIW+ V Q+ KGL R
Sbjct: 119 YEFHHLIAEGYGPQESAFLSAFFTLVGTHGLHVTFGLIWMAVAYHQLSTKGLNDNMSMRF 178
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210
CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 179 QCLSLFWHFLDIVWICVFTIVYLMGVM 205
>gi|121598058|ref|YP_990967.1| ubiquinol oxidase, subunit III [Burkholderia mallei SAVP1]
gi|167000704|ref|ZP_02266513.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
PRL-20]
gi|167724805|ref|ZP_02408041.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei DM98]
gi|167820936|ref|ZP_02452616.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 91]
gi|167850764|ref|ZP_02476272.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei B7210]
gi|167907699|ref|ZP_02494904.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei NCTC
13177]
gi|254177194|ref|ZP_04883850.1| ubiquinol oxidase, subunit III [Burkholderia mallei ATCC 10399]
gi|262192874|ref|YP_001077432.2| ubiquinol oxidase, subunit III [Burkholderia mallei NCTC 10247]
gi|121225856|gb|ABM49387.1| ubiquinol oxidase, subunit III [Burkholderia mallei SAVP1]
gi|160698234|gb|EDP88204.1| ubiquinol oxidase, subunit III [Burkholderia mallei ATCC 10399]
gi|243063389|gb|EES45575.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
PRL-20]
gi|261834995|gb|ABO02431.2| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
NCTC 10247]
Length = 202
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 189 WICVFSFVYLASVI 202
>gi|293607261|ref|ZP_06689602.1| quinol oxidase subunit III [Achromobacter piechaudii ATCC 43553]
gi|292814353|gb|EFF73493.1| quinol oxidase subunit III [Achromobacter piechaudii ATCC 43553]
Length = 204
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSD L+F+V F T+AVL A GP ++FD+ + V T++LL SS +
Sbjct: 25 TVFGFWVYLMSDLLIFSVLFATFAVLSNATAGGPTGKELFDLKFVLVETLLLLFSSFTFG 84
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A L + + WL+VT FG FI ME++EF HLI+ A P RSA+LS+FF L+
Sbjct: 85 MANLNVHANNK-SRAMGWLMVTFLFGAGFIAMEVWEFHHLITEGAGPGRSAYLSAFFTLI 143
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV FGLIW+ V++ I + GL S N+RRL CLS+FWHFLD++WICVF+FVYL+G
Sbjct: 144 GTHGLHVTFGLIWIIVMLDMIRRHGLDSINKRRLACLSLFWHFLDIVWICVFTFVYLLGA 203
Query: 210 V 210
+
Sbjct: 204 I 204
>gi|261826555|gb|ABM98575.2| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
NCTC 10229]
Length = 202
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRSALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 189 WICVFSFVYLASVI 202
>gi|126444259|ref|YP_001063706.1| ubiquinol oxidase subunit III [Burkholderia pseudomallei 668]
gi|126223750|gb|ABN87255.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei 668]
Length = 197
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVVFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVVIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|167829291|ref|ZP_02460762.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 9]
gi|167916041|ref|ZP_02503132.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 112]
gi|167923882|ref|ZP_02510973.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei BCC215]
Length = 202
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVVFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 189 WICVFSFVYLASVI 202
>gi|42795025|gb|AAS45858.1| CyoC [Pseudomonas putida]
Length = 208
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T+ LLLSS++
Sbjct: 29 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLFLLLSSITFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLIS PQRS FLS FFALV
Sbjct: 89 FAMLKMFDGKKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLISEGFGPQRSGFLSGFFALV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G +GLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 148 GTYGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|53722916|ref|YP_111901.1| cytochrome O ubiquinol oxidase subunit III [Burkholderia
pseudomallei K96243]
gi|126457786|ref|YP_001076600.1| ubiquinol oxidase subunit III [Burkholderia pseudomallei 1106a]
gi|217422722|ref|ZP_03454225.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei 576]
gi|237508107|ref|ZP_04520822.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei MSHR346]
gi|242311585|ref|ZP_04810602.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106b]
gi|254184767|ref|ZP_04891356.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1655]
gi|52213330|emb|CAH39373.1| cytochrome O ubiquinol oxidase subunit III [Burkholderia
pseudomallei K96243]
gi|126231554|gb|ABN94967.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106a]
gi|184215359|gb|EDU12340.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1655]
gi|217394953|gb|EEC34972.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei 576]
gi|235000312|gb|EEP49736.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
pseudomallei MSHR346]
gi|242134824|gb|EES21227.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106b]
Length = 197
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|124381907|ref|YP_001025368.1| ubiquinol oxidase, subunit III [Burkholderia mallei NCTC 10229]
Length = 197
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRSALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|226195781|ref|ZP_03791368.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pakistan
9]
gi|254185986|ref|ZP_04892504.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pasteur
52237]
gi|254301042|ref|ZP_04968486.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 406e]
gi|157810813|gb|EDO87983.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 406e]
gi|157933672|gb|EDO89342.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pasteur
52237]
gi|225932266|gb|EEH28266.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pakistan
9]
Length = 197
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVVFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|73538404|ref|YP_298771.1| cytochrome O ubiquinol oxidase subunit III [Ralstonia eutropha
JMP134]
gi|72121741|gb|AAZ63927.1| cyoC2, RSc1860; probable transmembrane cytochrome O ubiquinol
oxidase (subunit III) oxidoreductase protein [Ralstonia
eutropha JMP134]
Length = 220
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 126/197 (63%), Gaps = 7/197 (3%)
Query: 17 VKDKKESCVDHDG------TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
V + +HD T LGFW+YLMSDCL+FAV F TY VLG + A GPA ++FD
Sbjct: 20 VHHAAHTGAEHDAHASEGHTTLGFWLYLMSDCLIFAVLFATYGVLGNHTAGGPAGRELFD 79
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKR-LIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129
+ + V T++LL SS + AM++ R + + WL +T G FI MEIYEF L
Sbjct: 80 LRFVLVETMLLLCSSYTFGMAMMSIKNGRGEVRDVIRWLAITFMLGACFIGMEIYEFREL 139
Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189
+ A PQRSA LS+FF LVG HG+HV GL W+ VL Q+ GL + +RRL CLS+F
Sbjct: 140 LHEGAGPQRSAALSAFFMLVGTHGMHVAAGLAWIVVLAHQMQAFGLDAIVRRRLACLSLF 199
Query: 190 WHFLDLIWICVFSFVYL 206
WHFLDL+WICVF+FVYL
Sbjct: 200 WHFLDLVWICVFTFVYL 216
>gi|113867652|ref|YP_726141.1| bo3-type quinol oxidase, subunit III [Ralstonia eutropha H16]
gi|113526428|emb|CAJ92773.1| bo3-type quinol oxidase, subunit III [Ralstonia eutropha H16]
Length = 210
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLMSDCL+FAV F T+ VL N A GP +F++ +F T+VLLLSS +
Sbjct: 31 TPLGFWLYLMSDCLIFAVLFATFGVLSGNTAGGPGGRQLFELPFVFAETMVLLLSSYTFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AML T + + WL VT G +FI ME+YEFAHL+ A P SA+LS+FF LV
Sbjct: 91 LAMLRQGTDD-APRMIRWLAVTFALGALFIAMEVYEFAHLLHQGAGPGVSAYLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
G HGLHV GL+WL V++ QI GL +RRL CLS+FWHFLDL+WICVF+FVYL
Sbjct: 150 GTHGLHVTSGLLWLAVMIHQIRHFGLDDIVRRRLACLSLFWHFLDLVWICVFTFVYL 206
>gi|83716302|ref|YP_438681.1| cytochrome c oxidase subunit III [Burkholderia thailandensis E264]
gi|167615186|ref|ZP_02383821.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis Bt4]
gi|257141751|ref|ZP_05590013.1| cytochrome c oxidase subunit III [Burkholderia thailandensis E264]
gi|83650127|gb|ABC34191.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis E264]
Length = 204
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 128/188 (68%), Gaps = 4/188 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ + T +LL+
Sbjct: 18 DHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALETALLLV 77
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAM+ + R WL VT G F+ +E+ EF+H+I+ A PQRSAFLS
Sbjct: 78 SSITYGFAMIGAQRGRR-GALFGWLAVTFALGAAFLGLELREFSHMIAEGAGPQRSAFLS 136
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFS 202
SFF LVG HGLHV GL+W+ VL Q +++ ++ RRL CLS+FWHFLD++WICVFS
Sbjct: 137 SFFTLVGTHGLHVAIGLLWMAVLAFQAMRRPTLTERDIRRLTCLSLFWHFLDIVWICVFS 196
Query: 203 FVYLMGVV 210
FVYL V+
Sbjct: 197 FVYLASVI 204
>gi|227327521|ref|ZP_03831545.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 204
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F F TYAVL A GP ++F + + V T LL SS++ AM
Sbjct: 28 GFWVYLMSDLIIFGSLFATYAVLVNGTAGGPTGKELFQLPFVLVETFALLFSSITYGMAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +WL VT FG++FI MEIYEF HLI P RSAFLS+FFALVG H
Sbjct: 88 IA-MNKGNKSQVNAWLGVTFLFGLVFIGMEIYEFHHLIVEGYGPDRSAFLSAFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GIHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 204
>gi|148978617|ref|ZP_01815044.1| cytochrome o ubiquinol oxidase, subunit III [Vibrionales bacterium
SWAT-3]
gi|145962283|gb|EDK27565.1| cytochrome o ubiquinol oxidase, subunit III [Vibrionales bacterium
SWAT-3]
Length = 205
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ F M
Sbjct: 29 GFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMMLLFSSITFGFGM 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A ++ + WL VT G+ FI ME+YEF HLI+ PQ SAFLS+FF LVG H
Sbjct: 89 IA-MKRQDVAGLKKWLKVTFLLGLAFICMEVYEFHHLIAEGYGPQESAFLSAFFTLVGTH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIW+ V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 148 GLHVTFGLIWMAVAYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLMGVM 205
>gi|262042466|ref|ZP_06015625.1| quinol oxidase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259040170|gb|EEW41282.1| quinol oxidase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 181
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 5 GFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMAA 64
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + VSWL +T FG FI MEIYEF HLI RS FLS+FFALVG H
Sbjct: 65 IA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGLDRSGFLSAFFALVGTH 123
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 124 GLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLSLFWHFLDVVWICVFSVVYLMGAM 181
>gi|167573743|ref|ZP_02366617.1| ubiquinol oxidase, subunit III [Burkholderia oklahomensis C6786]
Length = 202
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ + T +LL+SS++ FAM
Sbjct: 25 GFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVAIETALLLVSSITYGFAM 84
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + R + WL VT G F+ +E+ EF+H+I+ A PQRSAFLSSFF LVG H
Sbjct: 85 IGAQRGRR-SALLGWLAVTFVLGAAFLGLELREFSHMIAEGAGPQRSAFLSSFFTLVGTH 143
Query: 153 GLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VL Q ++ L + RRL CLS+FWHFLD++WICVF+FVYL V+
Sbjct: 144 GLHVAIGLLWMAVLAFQATRRPALTERDIRRLTCLSLFWHFLDIVWICVFTFVYLASVI 202
>gi|326793469|ref|YP_004311289.1| cytochrome o ubiquinol oxidase subunit III [Marinomonas
mediterranea MMB-1]
gi|326544233|gb|ADZ89453.1| cytochrome o ubiquinol oxidase, subunit III [Marinomonas
mediterranea MMB-1]
Length = 202
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLM+DC++F+ FF TYAVL N A G + D+FD++ + T LL SS++
Sbjct: 23 TTFGFWIYLMTDCILFSCFFATYAVLFMNTAGGVSGKDIFDLTLVGGGTAALLFSSITFG 82
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+ SA K+ T+ WL VT FG +F+ +E+YEF HLI P +SAFL++FF+LV
Sbjct: 83 FAMI-SAYKKNKGGTLFWLAVTFVFGAVFLGLEVYEFHHLIHAGHGPDKSAFLTAFFSLV 141
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG HV G+IW+ V+ ++ K GL S RL CLS+FWHFLD+IWICVFSFVYLMG
Sbjct: 142 GLHGFHVTAGMIWIIVMFCEVSKGGLESRTVTRLSCLSLFWHFLDVIWICVFSFVYLMGA 201
Query: 210 V 210
+
Sbjct: 202 M 202
>gi|166713086|ref|ZP_02244293.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 210
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 31 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ MEI+EF HLI A P RSAFLS+FF LV
Sbjct: 91 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 150 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|73540687|ref|YP_295207.1| transmembrane cytochrome O ubiquinol oxidase (subunit III)
oxidoreductase protein [Ralstonia eutropha JMP134]
gi|72118100|gb|AAZ60363.1| probable transmembrane cytochrome O ubiquinol oxidase (subunit III)
oxidoreductase protein [Ralstonia eutropha JMP134]
Length = 217
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 4/210 (1%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
+ G + + + D+ HD T GFW+YLMSDC++FA F +AVL A
Sbjct: 9 DRFGAAQAPAHAHSHDETHDHAHHDTSENTIFGFWLYLMSDCILFACLFAAFAVLRGEVA 68
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
GP+ ++F+++ + V T +LL SS++ FAM+ S R + + WL +T G F+
Sbjct: 69 GGPSAKELFELNYVLVETFILLFSSITYGFAMI-SMQNRSKGRVLVWLGITFLLGAAFMY 127
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
MEI EF HLI+ A P RSAFLSSFF LVG HGLHV G++W+ VL+ Q+ KKGL
Sbjct: 128 MEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASGMVWMLVLMWQVSKKGLTPTMS 187
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 188 KRLNCLSLFWHFLDVVWIGVFTVVYLMGAM 217
>gi|289670392|ref|ZP_06491467.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 210
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 31 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 91 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPSRSAFLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 150 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|294627030|ref|ZP_06705620.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598692|gb|EFF42839.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 208
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 29 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVNGPTAKELFDLKFVLVETFLLLFSSLSFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 89 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 148 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|167899367|ref|ZP_02486768.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 7894]
Length = 202
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVVFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L+ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRHPALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 189 WICVFSFVYLASVI 202
>gi|21242013|ref|NP_641595.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas axonopodis
pv. citri str. 306]
gi|21107411|gb|AAM36131.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas axonopodis
pv. citri str. 306]
Length = 208
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 29 TVFGFWVYLMSDCLLFACLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 89 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 148 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|239995159|ref|ZP_04715683.1| cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain
C) [Alteromonas macleodii ATCC 27126]
Length = 205
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+ T GFW+YLM+DCL+FA FF TYAVL N A G + D+F+++ + V T LLLSS++
Sbjct: 24 NNTVFGFWLYLMTDCLLFASFFATYAVLFMNTAGGVSGKDIFELNFVAVETAALLLSSIA 83
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+ A ++ ++WL VT G FI ME+YEF HLI PQ+SAFL++FF+
Sbjct: 84 FGFAMIC-AHRQNKSGALAWLAVTWALGACFIGMEVYEFHHLIEHGNGPQQSAFLTAFFS 142
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVGLHGLHV GLIW+ ++ I++ ++ L RL CLS+FWHFLD++WICVF+ VYLM
Sbjct: 143 LVGLHGLHVTAGLIWMTIMFIEVTRRDLGEQTVTRLSCLSLFWHFLDIVWICVFTVVYLM 202
Query: 208 GVV 210
G +
Sbjct: 203 GAM 205
>gi|325928655|ref|ZP_08189834.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas perforans
91-118]
gi|325540983|gb|EGD12546.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas perforans
91-118]
Length = 210
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 31 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 91 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 150 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|197284018|ref|YP_002149890.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis
HI4320]
gi|227358112|ref|ZP_03842453.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis ATCC
29906]
gi|194681505|emb|CAR40377.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis
HI4320]
gi|227161448|gb|EEI46485.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis ATCC
29906]
Length = 203
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 18 KDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
+ E HD GFWIYLMSD ++FA F TYAVL A GP+ ++F + +
Sbjct: 9 ANAHEHHGHHDAGATKVFGFWIYLMSDLILFASLFATYAVLVNGIADGPSGKEIFSLPFV 68
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T +LL SS++ FAML S K + + WL VT FG+ F++ME+YEF LI+
Sbjct: 69 LVETFLLLFSSITFGFAML-SMNKGSVSQVNLWLFVTFLFGLGFVVMEVYEFHELIAEGY 127
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RSAFLS+FFALV HGLHV GL+W+ +++IQ+ ++GL N+ RL CLS+FWHFLD
Sbjct: 128 GPDRSAFLSAFFALVSTHGLHVTAGLVWIIIMMIQVSRRGLTDVNRTRLSCLSLFWHFLD 187
Query: 195 LIWICVFSFVYLMG 208
++WICVF+ VYLMG
Sbjct: 188 VVWICVFTVVYLMG 201
>gi|91225751|ref|ZP_01260780.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus
12G01]
gi|269968096|ref|ZP_06182133.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus
40B]
gi|91189640|gb|EAS75915.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus
12G01]
gi|269827342|gb|EEZ81639.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus
40B]
Length = 200
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL N AGP D+F++ +FV T++LL SS++ F +
Sbjct: 24 GFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKDIFELPFVFVETMLLLFSSITFGFGI 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 84 IA-MKRNNVAGLKRWMLVTFALGLGFICMEVYEFHHLIEEGYGPQTSAFLSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 143 GLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLLGVM 200
>gi|254202955|ref|ZP_04909317.1| ubiquinol oxidase, subunit III [Burkholderia mallei FMH]
gi|254208289|ref|ZP_04914638.1| ubiquinol oxidase, subunit III [Burkholderia mallei JHU]
gi|147746000|gb|EDK53078.1| ubiquinol oxidase, subunit III [Burkholderia mallei FMH]
gi|147750976|gb|EDK58044.1| ubiquinol oxidase, subunit III [Burkholderia mallei JHU]
Length = 197
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R W VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWFAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|148560198|ref|YP_001258091.1| cytochrome o ubiquinol oxidase subunit III [Brucella ovis ATCC
25840]
gi|148371455|gb|ABQ61434.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ovis ATCC
25840]
Length = 209
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 126/196 (64%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
D HD T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ +
Sbjct: 15 NDHPAHEDHHDAGSTTLVGFWIYLMSDCILFSGLFATYAVLAHRFAGGPTGRELFDLQFV 74
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T++LL+SSL+ A L S K + WL VT G F+ MEIYEF HLI A
Sbjct: 75 LVETMLLLVSSLTYGLATL-SMYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGA 133
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RS+FLS+FF LVG HG H+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD
Sbjct: 134 GPDRSSFLSAFFTLVGTHGFHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLD 193
Query: 195 LIWICVFSFVYLMGVV 210
+IWI VF+ VYL+GV+
Sbjct: 194 IIWIGVFTLVYLLGVL 209
>gi|78046865|ref|YP_363040.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78035295|emb|CAJ22940.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length = 208
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 29 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 89 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 148 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|294664344|ref|ZP_06729708.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292605884|gb|EFF49171.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 208
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 29 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF LV
Sbjct: 89 FAMIA-AHKRKMGGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 148 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|58581254|ref|YP_200270.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|58425848|gb|AAW74885.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv.
oryzae KACC10331]
Length = 210
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 31 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + W+ VTA G+ F+ MEI+EF HLI A P RSAFLS+FF LV
Sbjct: 91 FAMIA-AHKRKMGGLYGWMAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 150 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|53716519|ref|YP_105023.1| ubiquinol oxidase, subunit III [Burkholderia mallei ATCC 23344]
gi|67641746|ref|ZP_00440514.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
GB8 horse 4]
gi|52422489|gb|AAU46059.1| ubiquinol oxidase, subunit III [Burkholderia mallei ATCC 23344]
gi|238522721|gb|EEP86164.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
GB8 horse 4]
Length = 202
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R W VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWFAVTFVLGAAFLGLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 189 WICVFSFVYLASVI 202
>gi|134278331|ref|ZP_01765045.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 305]
gi|134250115|gb|EBA50195.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 305]
Length = 197
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH + GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPAHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQIL-KKGLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L + L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALHRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICVFSFVYL V+
Sbjct: 184 WICVFSFVYLASVI 197
>gi|153837577|ref|ZP_01990244.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus AQ3810]
gi|149749074|gb|EDM59885.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus AQ3810]
Length = 200
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ F +
Sbjct: 24 GFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITFGFGI 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 84 IA-MKRNDVSGLKRWMLVTFALGLGFICMEVYEFHHLIKEGYGPQTSAFLSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 143 GLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMGVM 200
>gi|260901248|ref|ZP_05909643.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus AQ4037]
gi|308106822|gb|EFO44362.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus AQ4037]
Length = 200
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ F +
Sbjct: 24 GFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITFGFGI 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 84 IA-MKRNDVAGLKRWMLVTFALGLGFICMEVYEFHHLIQEGYGPQTSAFLSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 143 GLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMGVM 200
>gi|28900484|ref|NP_800139.1| cytochrome o ubiquinol oxidase subunit III [Vibrio parahaemolyticus
RIMD 2210633]
gi|260365637|ref|ZP_05778158.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus K5030]
gi|260877437|ref|ZP_05889792.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus AN-5034]
gi|260898918|ref|ZP_05907359.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus Peru-466]
gi|28808864|dbj|BAC61972.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089175|gb|EFO38870.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus Peru-466]
gi|308090543|gb|EFO40238.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus AN-5034]
gi|308111449|gb|EFO48989.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio
parahaemolyticus K5030]
Length = 200
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ F +
Sbjct: 24 GFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITFGFGI 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 84 IA-MKRNDVAGLKRWMLVTFALGLGFICMEVYEFHHLIQEGYGPQTSAFLSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 143 GLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMGVM 200
>gi|84623174|ref|YP_450546.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|84367114|dbj|BAE68272.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 208
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 29 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + W+ VTA G+ F+ MEI+EF HLI A P RSAFLS+FF LV
Sbjct: 89 FAMIA-AHKRKMGGLYGWMAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 148 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|188575778|ref|YP_001912707.1| cytOchrome o ubiquinol oxidase, subunit III [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520230|gb|ACD58175.1| cytOchrome o ubiquinol oxidase, subunit III [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 210
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 31 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+A A KR + W+ VTA G+ F+ MEI+EF HLI A P RSAFLS+FF LV
Sbjct: 91 FAMIA-AHKRKMGGLYGWMAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTLV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 150 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|238025054|ref|YP_002909286.1| cytochrome c oxidase subunit III [Burkholderia glumae BGR1]
gi|237879719|gb|ACR32051.1| Cytochrome c oxidase subunit III [Burkholderia glumae BGR1]
Length = 203
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 119/179 (66%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AV+ +A GP D+FDI G+ + T LLLSS++ FAM
Sbjct: 26 GFWLYLMTDCILFGTLFAVFAVMQHEFAGGPTAKDLFDIPGVALETAALLLSSITYGFAM 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ A + WL VT G F+ MEI EF HLI+ A P RS FLSSFF LV H
Sbjct: 86 IG-AHRNNRGAVFGWLAVTFLLGASFLFMEIREFTHLIAEGAGPDRSGFLSSFFTLVATH 144
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ VLV+QI + +S RRL CLS+FWHFLD++WICVF+FVYL+ V+
Sbjct: 145 GLHVTMGLIWMVVLVVQIARNPELSEQDVRRLTCLSLFWHFLDIVWICVFTFVYLVSVI 203
>gi|156976718|ref|YP_001447624.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio harveyi ATCC
BAA-1116]
gi|156528312|gb|ABU73397.1| hypothetical protein VIBHAR_05493 [Vibrio harveyi ATCC BAA-1116]
Length = 199
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ F M
Sbjct: 23 GFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITFGFGM 82
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + WL VT G+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 83 IAMKRKD-VAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTLVGTH 141
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 142 GLHVTFGLIWLAVGYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLGVM 199
>gi|153833148|ref|ZP_01985815.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio harveyi HY01]
gi|163800403|ref|ZP_02194304.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio sp. AND4]
gi|148870578|gb|EDL69486.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio harveyi HY01]
gi|159175846|gb|EDP60640.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio sp. AND4]
Length = 199
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ F M
Sbjct: 23 GFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITFGFGM 82
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + WL VT G+ FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 83 IAMKRKD-VAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTLVGTH 141
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 142 GLHVTFGLIWLAVGYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLGVM 199
>gi|186472486|ref|YP_001859828.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum
STM815]
gi|184194818|gb|ACC72782.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum
STM815]
Length = 204
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++FA F +AV+ + AGP D+FDI G+ V T LLLSS++ FAM
Sbjct: 27 GFWLYLMTDCVLFASLFAVFAVMAHQFNAGPTGKDLFDIPGVAVETAALLLSSITYGFAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A A ++ + WL VT G +F+ +E+ EF+HL++ A P RSAFLSSFF LVG H
Sbjct: 87 VA-ARRQNPRAVLGWLAVTFVLGAVFLKLELNEFSHLVAEGAGPSRSAFLSSFFVLVGTH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFSFVYL 206
GLHV GLIW+ VL +Q+ + ++ + RL CLS+FWHFLD++WICVF+FVYL
Sbjct: 146 GLHVATGLIWMAVLAVQVARAPQLTQREITRLTCLSLFWHFLDVVWICVFTFVYL 200
>gi|312881377|ref|ZP_07741174.1| cytochrome o ubiquinol oxidase subunit III [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309371017|gb|EFP98472.1| cytochrome o ubiquinol oxidase subunit III [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 199
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL +GP D+F++ +FV T++LL SS++ F M
Sbjct: 23 GFWIYLMSDCILFATLFATYAVLETGSISGPTGKDIFELPFVFVETMLLLFSSITFGFGM 82
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A + I W+ VT G+ FI MEIYEF HLI PQ SAFLS+FF LVG H
Sbjct: 83 IA-MKRNDIAGLKRWMKVTFLLGVGFIAMEIYEFHHLIEAGYGPQESAFLSAFFTLVGTH 141
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGL+WL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 142 GLHVTFGLVWLAVCYHQLSTKGLNENMAMRFSCLSLFWHFLDIVWICVFTIVYLMGVM 199
>gi|76818220|ref|YP_336149.1| ubiquinol oxidase subunit III [Burkholderia pseudomallei 1710b]
gi|76582693|gb|ABA52167.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710b]
Length = 202
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 PRHAAHDHPPSHSVFGFWLYLMTDCVVFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 70 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 128
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 129 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 188
Query: 197 WICVFSFVYLMGVV 210
WICV SFVYL V+
Sbjct: 189 WICVSSFVYLASVI 202
>gi|260769715|ref|ZP_05878648.1| cytochrome O ubiquinol oxidase subunit III [Vibrio furnissii CIP
102972]
gi|260615053|gb|EEX40239.1| cytochrome O ubiquinol oxidase subunit III [Vibrio furnissii CIP
102972]
gi|315182289|gb|ADT89202.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio furnissii NCTC
11218]
Length = 200
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F T+AVL A GP ++F++ +F T++LL SS++ F M
Sbjct: 23 GFWIYLMSDCVLFASLFATFAVLSNATAGGPTGKELFELPFVFAETMLLLFSSITFGFGM 82
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K I WL VT G FI ME+YEF HLI+ A PQRSAFLS+FF LVG H
Sbjct: 83 IAMKRKD-IAGLKRWLAVTFLLGAGFIGMELYEFHHLIAEGAGPQRSAFLSAFFTLVGTH 141
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL + R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 142 GLHVTFGLIWLAVCYWQLNTKGLNDMMETRFNCLSLFWHFLDIVWICVFTIVYLLGVM 199
>gi|325921008|ref|ZP_08182891.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas gardneri ATCC
19865]
gi|325548515|gb|EGD19486.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas gardneri ATCC
19865]
Length = 209
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
D E T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V
Sbjct: 18 HDDHEHHDAGGNTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVE 77
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL SSLS AM+ SA KR + +WL VTA G+ F+ ME++EF HLI A P
Sbjct: 78 TFLLLFSSLSFGVAMI-SAHKRSMTGLYAWLGVTALLGIGFLCMEVWEFNHLIHEGAGPG 136
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
RSAFLS+FF LVG HGLHV GL+W+ VLVIQI K GL N RL CLS+FWHFLD+IW
Sbjct: 137 RSAFLSAFFTLVGTHGLHVASGLLWMAVLVIQISKNGLTPRNSTRLACLSLFWHFLDIIW 196
Query: 198 ICVFSFVYLMGVV 210
I VF+ VYL+G +
Sbjct: 197 IGVFTVVYLLGAL 209
>gi|209518752|ref|ZP_03267567.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp. H160]
gi|209500794|gb|EEA00835.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp. H160]
Length = 201
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 134/196 (68%), Gaps = 8/196 (4%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP+ D+F+I G+ +
Sbjct: 9 EPQLAPDHVPSHSVFGFWLYLMTDCIVFAALFAVFAVMSHQFAGGPSGKDLFEIPGVALE 68
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTV--SWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
T +LLLSS++ FAML + R K V WL VT G+ F+++E+ EF+HLI+ A
Sbjct: 69 TTMLLLSSITYGFAMLGAHKNR---KGVLLGWLGVTFLLGLAFLVLEMREFSHLIAEGAG 125
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLD 194
P RSAFLSSFF LVG HGLHV FGLIW+ VL +Q+++ + L + RL CLS+FWHFLD
Sbjct: 126 PGRSAFLSSFFTLVGTHGLHVTFGLIWMVVLALQVMRHRDLTERDMIRLTCLSLFWHFLD 185
Query: 195 LIWICVFSFVYLMGVV 210
++WI VF+FVYL V+
Sbjct: 186 VVWIGVFTFVYLASVI 201
>gi|21230618|ref|NP_636535.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66769386|ref|YP_244148.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. campestris str. 8004]
gi|188992573|ref|YP_001904583.1| Cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. campestris str. B100]
gi|21112199|gb|AAM40459.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66574718|gb|AAY50128.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. campestris str. 8004]
gi|167734333|emb|CAP52543.1| Cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris
pv. campestris]
Length = 209
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS
Sbjct: 30 TVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSFG 89
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+ SA KR + WL VTA G+ F+ MEI+EF HLI A P RSAFLS+FF LV
Sbjct: 90 FAMI-SAHKRKMAGLYGWLAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFFLV 148
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G
Sbjct: 149 GTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLGA 208
Query: 210 V 210
+
Sbjct: 209 L 209
>gi|127511302|ref|YP_001092499.1| cytochrome c oxidase, subunit III [Shewanella loihica PV-4]
gi|126636597|gb|ABO22240.1| cytochrome c oxidase, subunit III [Shewanella loihica PV-4]
Length = 208
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 136/207 (65%), Gaps = 2/207 (0%)
Query: 5 KIGKSPNFSLFYVKDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63
I + S+ V+ E D + T LGFWIYLM+DC++FA F TYAVL N G
Sbjct: 2 SIAIPADLSVTQVETLHEEHHDTGENTLLGFWIYLMTDCILFASAFATYAVLYMNTDGGV 61
Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123
+ DVF++ + + T LLLSS++ A++ A + T++WL VT G +FI ME+
Sbjct: 62 SGKDVFELDFVLIETAALLLSSITYGLALI-FAKRHHKGATLAWLAVTFALGCVFIGMEV 120
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
EF HLI PQRSAFLS+FFALVG+HGLHV GL+W+ +++++++K+G RL
Sbjct: 121 NEFHHLILEGNGPQRSAFLSAFFALVGMHGLHVSAGLVWMAIMMLEVVKRGTGGRTLTRL 180
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210
CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 181 NCLSLFWHFLDIVWICVFTVVYLMGVL 207
>gi|114049400|ref|YP_739950.1| cytochrome c oxidase subunit III [Shewanella sp. MR-7]
gi|113890842|gb|ABI44893.1| cytochrome c oxidase, subunit III [Shewanella sp. MR-7]
Length = 206
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F TYAVL N G + D+F++ + + T LLLSS++
Sbjct: 27 TLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLLSSITYG 86
Query: 90 FAML-ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
FA++ A RL T++WL +T G +FI ME+YEF HLI PQRSAFLSSFF L
Sbjct: 87 FALIFAKRHNRL--ATLTWLAITFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTL 144
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
VG+HGLHV GLIW+ +++I++ K GL + + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 145 VGMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLSCLSLFWHFLDIVWICVFTVVYLLG 204
Query: 209 VV 210
+
Sbjct: 205 AL 206
>gi|149189686|ref|ZP_01867968.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio shilonii AK1]
gi|148836498|gb|EDL53453.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio shilonii AK1]
Length = 199
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 26 DH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
DH D GFWIYLMSDC++FA F TYAVL N G ++F++ +FV T++LLLS
Sbjct: 14 DHSDNKLFGFWIYLMSDCVLFATLFATYAVLASNPMTGSLARELFELPFVFVETMLLLLS 73
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ F M+A + + + + W+ VT G+ FI ME+YEF HLI PQ +AFLS+
Sbjct: 74 SITFGFGMIAMKRQDITNLKL-WMKVTFLLGLGFIGMEVYEFHHLIVEGYGPQTNAFLSA 132
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FF LVG HGLHV FGLIW+ V Q+ KKGL S R CLS+FWHFLD++WICVF+ V
Sbjct: 133 FFTLVGTHGLHVTFGLIWMAVCYHQLSKKGLNSNMTMRFSCLSLFWHFLDIVWICVFTIV 192
Query: 205 YLMGVV 210
YL+GV+
Sbjct: 193 YLLGVM 198
>gi|254264481|ref|ZP_04955346.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710a]
gi|254215483|gb|EET04868.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710a]
Length = 197
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ + DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 5 PRHAAHDHPPSHSVFGFWLYLMTDCVVFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 64
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL+SS++ FAM+ + R WL VT G F+ +E+ EF+ +I+ A PQ
Sbjct: 65 TALLLVSSITYGFAMIGAQRGRR-GALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQ 123
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFWHFLDLI 196
RSAFLSSFF LVG HGLHV GL+W+ VL Q L++ L + RRL CLS+FWHFLD++
Sbjct: 124 RSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSLFWHFLDIV 183
Query: 197 WICVFSFVYLMGVV 210
WICV SFVYL V+
Sbjct: 184 WICVSSFVYLASVI 197
>gi|295699446|ref|YP_003607339.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia sp.
CCGE1002]
gi|295438659|gb|ADG17828.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp.
CCGE1002]
Length = 201
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 8/190 (4%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F +AV+ + +A GP+ D+F+I G+ + T +LLL
Sbjct: 15 DHVPSHSVFGFWVYLMTDCIIFAALFAVFAVMSQQFAGGPSGKDLFEIPGVALETTMLLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTV--SWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
SS++ FAML + R K V WL VT G F+++E+ EF+H+I+ A P RSAF
Sbjct: 75 SSITYGFAMLGAHKNR---KGVLLGWLGVTFLLGFAFLVLEMREFSHMIAEGAGPSRSAF 131
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWICV 200
LSSFF LVG HGLHV FGLIW+ VL +Q+++ + L + RL CLS+FWHFLD++WI V
Sbjct: 132 LSSFFTLVGTHGLHVTFGLIWMVVLALQVMRHRDLTERDMIRLTCLSLFWHFLDVVWIGV 191
Query: 201 FSFVYLMGVV 210
F+FVYL V+
Sbjct: 192 FTFVYLASVI 201
>gi|260778347|ref|ZP_05887240.1| cytochrome O ubiquinol oxidase subunit III [Vibrio coralliilyticus
ATCC BAA-450]
gi|260606360|gb|EEX32645.1| cytochrome O ubiquinol oxidase subunit III [Vibrio coralliilyticus
ATCC BAA-450]
Length = 198
Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 125/191 (65%), Gaps = 7/191 (3%)
Query: 26 DHD-----GTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
DHD G L GFW+YLMSDC++FA F TYAVL +GP D+F++ +FV T+
Sbjct: 9 DHDHHDTSGNKLFGFWVYLMSDCVLFATLFATYAVLESGSISGPTGKDIFELPFVFVETM 68
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
+LL SS++ F M+A K + WL VT G+ FI ME+YEF HLI+ PQ S
Sbjct: 69 LLLFSSITFGFGMIAMKRKD-VAGLKRWLQVTFLLGLGFIGMEVYEFHHLIAEGYGPQAS 127
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
AFLS+FF LVG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WIC
Sbjct: 128 AFLSAFFTLVGTHGLHVTFGLIWLAVCYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWIC 187
Query: 200 VFSFVYLMGVV 210
VF+ VYL+GV+
Sbjct: 188 VFTIVYLLGVM 198
>gi|153002718|ref|YP_001368399.1| cytochrome o ubiquinol oxidase subunit III [Shewanella baltica
OS185]
gi|151367336|gb|ABS10336.1| Cytochrome o ubiquinol oxidase subunit III [Shewanella baltica
OS185]
Length = 206
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 27 TLFGFWIYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLVSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A++ A + T++WLLVT G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 MALI-FAKRHNKAATLAWLLVTFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|304412073|ref|ZP_07393683.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
OS183]
gi|307305968|ref|ZP_07585714.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
BA175]
gi|304349623|gb|EFM14031.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
OS183]
gi|306911461|gb|EFN41887.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
BA175]
Length = 206
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 27 TLFGFWIYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLVSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A++ A + T++WLLVT G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 MALI-FAKRHNKAATLAWLLVTFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|117922464|ref|YP_871656.1| cytochrome c oxidase subunit III [Shewanella sp. ANA-3]
gi|117614796|gb|ABK50250.1| cytochrome c oxidase, subunit III [Shewanella sp. ANA-3]
Length = 206
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F TYAVL N G + D+F++ + + T LLLSS++
Sbjct: 27 TLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLLSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FA++ A + T++WL +T G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 FALIF-AKRHNKAATLTWLAITFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|152994133|ref|YP_001338968.1| cytochrome o ubiquinol oxidase subunit III [Marinomonas sp. MWYL1]
gi|150835057|gb|ABR69033.1| Cytochrome o ubiquinol oxidase subunit III [Marinomonas sp. MWYL1]
Length = 203
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DCL+FA F TYAVL N A G + D+F++ + V T +LL+SS++ FAM
Sbjct: 27 GFWLYLMTDCLLFATIFATYAVLFMNTAGGVSGKDIFELDFVLVETALLLVSSITYGFAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ A K+ T+SWL VT G FI MEIYEF HLI PQ SAFLS+FF LVG H
Sbjct: 87 IC-AHKKDKKGTMSWLSVTFLLGAGFIGMEIYEFHHLIVHGNGPQASAFLSAFFTLVGTH 145
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ +L+I++ G S RL CLS+FWHFLD+IWICVF+ VYLMG +
Sbjct: 146 GLHVTAGLIWMAILMIELTVSGFGSRTVTRLSCLSLFWHFLDVIWICVFTVVYLMGAI 203
>gi|332290094|ref|YP_004420946.1| cytochrome o ubiquinol oxidase subunit III [Gallibacterium anatis
UMN179]
gi|330432990|gb|AEC18049.1| cytochrome o ubiquinol oxidase subunit III [Gallibacterium anatis
UMN179]
Length = 202
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSD ++F+ F TY VL A P+ D+F++ + V T +LL SS++ FA+
Sbjct: 25 GFWIYLMSDLILFSCLFATYIVLLPGTAGAPSGKDIFELPYVLVETFLLLFSSITYGFAV 84
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + + WL+VT FG F+ MEI EF HLI+ P RS FLS FF LVG H
Sbjct: 85 LA-MNRNNAKQVLLWLVVTFLFGAAFVGMEINEFHHLIAQGVGPDRSGFLSGFFTLVGTH 143
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ V++IQ++ +GL + N+ RL+CLS+FWHFLD++WICVFS VYLMGV+
Sbjct: 144 GLHVTAGLIWMVVMMIQVVTRGLSAVNRTRLMCLSLFWHFLDIVWICVFSVVYLMGVL 201
>gi|294143096|ref|YP_003559074.1| cytochrome o ubiquinol oxidase subunit III [Shewanella violacea
DSS12]
gi|7657997|dbj|BAA94866.1| quinol oxidase sybunit IV [Shewanella violacea]
gi|293329565|dbj|BAJ04296.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella violacea
DSS12]
Length = 207
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 135/197 (68%), Gaps = 4/197 (2%)
Query: 17 VKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
V+ + HD T GFW+YLM+DC++FA F TYAVL N G + D+F+++
Sbjct: 12 VQADEHHDEHHDTSGNTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELNF 71
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ + T VLL+SS++ FA++ + ++ T+ WLL+T G FI ME+YEF HLI
Sbjct: 72 VAIETAVLLISSITFGFALICAKHQKRT-ATLIWLLITFALGCGFISMEVYEFYHLIEQG 130
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
PQRSAFL++FF LVG+HGLHV GLIW+ ++++++ K GL + + RL CLS+FWHFL
Sbjct: 131 NGPQRSAFLTAFFTLVGMHGLHVTAGLIWMAIMMLEVTKSGLNNRSITRLGCLSLFWHFL 190
Query: 194 DLIWICVFSFVYLMGVV 210
D++WICVF+ VYL+G++
Sbjct: 191 DVVWICVFTLVYLLGML 207
>gi|262369761|ref|ZP_06063089.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter johnsonii
SH046]
gi|262315829|gb|EEY96868.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter johnsonii
SH046]
Length = 206
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 130/196 (66%), Gaps = 4/196 (2%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV 76
D+ D D T GFW YLMSD ++F F+ +AVL + G P+ ++F S FV
Sbjct: 12 HDEHHQHDDTDITVFGFWTYLMSDLILFGTLFIAFAVLSSHVPMGTPSAKELFGESLGFV 71
Query: 77 --STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
T LL+SS++ FA+LA A K+ +++ ++WL +T FG FI ME+YEF HL+
Sbjct: 72 LTETFALLISSVTFGFAVLA-AYKKNVNQVLTWLAITWLFGASFIGMELYEFNHLVHAGH 130
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P SAFLSSFF LVG HG+HV GL+W+ +L+IQI K GL N RRL CLS+FWHFLD
Sbjct: 131 GPSVSAFLSSFFTLVGTHGIHVTSGLVWMIILMIQIKKNGLTLPNTRRLACLSLFWHFLD 190
Query: 195 LIWICVFSFVYLMGVV 210
++WICVFS VYLMGV+
Sbjct: 191 IVWICVFSVVYLMGVL 206
>gi|120596926|ref|YP_961500.1| cytochrome c oxidase subunit III [Shewanella sp. W3-18-1]
gi|217975291|ref|YP_002360042.1| cytochrome o ubiquinol oxidase subunit III [Shewanella baltica
OS223]
gi|120557019|gb|ABM22946.1| cytochrome c oxidase, subunit III [Shewanella sp. W3-18-1]
gi|217500426|gb|ACK48619.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
OS223]
Length = 206
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 27 TLFGFWIYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLVSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A++ A + T++WLLVT G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 MALI-FAKRHNKAATLAWLLVTFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVAKTGLGHRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|113972152|ref|YP_735945.1| cytochrome c oxidase subunit III [Shewanella sp. MR-4]
gi|113886836|gb|ABI40888.1| cytochrome c oxidase, subunit III [Shewanella sp. MR-4]
Length = 206
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F TYAVL N G + D+F++ + + T LLLSS++
Sbjct: 27 TLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLLSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FA++ A + T++WL +T G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 FALIF-AKRHNKAATLTWLAITFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVGKTGLGNRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|330821326|ref|YP_004350188.1| Cytochrome c oxidase subunit III [Burkholderia gladioli BSR3]
gi|327373321|gb|AEA64676.1| Cytochrome c oxidase subunit III [Burkholderia gladioli BSR3]
Length = 203
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 119/179 (66%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AV+ +A GP D+FDI G+ + T LLLSS++ FAM
Sbjct: 26 GFWLYLMTDCILFGSLFAVFAVMQHQFAGGPTAKDLFDIPGVALETAALLLSSITYGFAM 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ A + WL VT G F+ MEI EFAHLI A P RSAFLSSFF LV H
Sbjct: 86 IG-AHRNNRGAVFGWLAVTFILGASFLFMEIREFAHLIEEGAGPGRSAFLSSFFTLVATH 144
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV G+IW+ VL+ QI + +S RRL CLS+FWHFLD++WICVF+FVYL+ V+
Sbjct: 145 GLHVTMGMIWMVVLLFQIARNPQLSEQDIRRLTCLSLFWHFLDIVWICVFTFVYLVSVI 203
>gi|269964140|ref|ZP_06178437.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831095|gb|EEZ85257.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 199
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ F M
Sbjct: 23 GFWIYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITFGFGM 82
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + WL VT G FI ME+YEF HLI PQ SAFLS+FF LVG H
Sbjct: 83 IAMKLKD-VAGLKRWLKVTFLLGAGFIGMEVYEFHHLIVEGYGPQESAFLSAFFTLVGTH 141
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 142 GLHVTFGLIWLAVCYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLGVM 199
>gi|187919714|ref|YP_001888745.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia
phytofirmans PsJN]
gi|187718152|gb|ACD19375.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia
phytofirmans PsJN]
Length = 201
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 127/181 (70%), Gaps = 6/181 (3%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++FA F +AV+G +A GP+ D+F+I G+ + T +LLLSS++ FAM
Sbjct: 24 GFWLYLMTDCIIFAALFAVFAVMGHQFAGGPSGKDLFEIPGVALETTMLLLSSITYGFAM 83
Query: 93 LASATKRLIHKTVS--WLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVG 150
L + R K V WL VT G+ F+++E+ EF+HLI+ A P RSAFLSSFF LVG
Sbjct: 84 LGAHKNR---KGVLLFWLGVTFLLGLAFLVLELREFSHLIAEGAGPSRSAFLSSFFTLVG 140
Query: 151 LHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HGLHV GLIW+ VL IQ++ + L + RL CLS+FWHFLD++WI VF+FVYL V
Sbjct: 141 THGLHVTCGLIWMVVLAIQVISHRDLTERDMIRLTCLSLFWHFLDVVWIGVFTFVYLASV 200
Query: 210 V 210
+
Sbjct: 201 I 201
>gi|146294941|ref|YP_001185365.1| cytochrome c oxidase subunit III [Shewanella putrefaciens CN-32]
gi|145566631|gb|ABP77566.1| cytochrome c oxidase, subunit III [Shewanella putrefaciens CN-32]
Length = 206
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 26 NTLFGFWIYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLVSSITY 85
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
A++ A + T++WLLVT G +FI ME+YEF HLI PQRSAFLSSFF L
Sbjct: 86 GMALIF-AKRHNKAATLTWLLVTFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTL 144
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
VG+HGLHV GLIW+ +++I++ K GL + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 145 VGMHGLHVTAGLIWMAIMMIEVAKTGLGHRSITRLSCLSLFWHFLDIVWICVFTVVYLLG 204
Query: 209 VV 210
+
Sbjct: 205 AL 206
>gi|270263563|ref|ZP_06191832.1| hypothetical protein SOD_e01870 [Serratia odorifera 4Rx13]
gi|270042447|gb|EFA15542.1| hypothetical protein SOD_e01870 [Serratia odorifera 4Rx13]
Length = 172
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP+ D+FD+ + V T +LL SS++ AM+ K
Sbjct: 1 MSDCILFASLFATYAVLVNGTAGGPSGKDIFDLKFVLVETFLLLFSSITYGMAMIG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLS FFALV HGLHV
Sbjct: 60 GKVGSVNTWLFLTFLFGLGFVAMEIYEFHHLIAEGFGPDRSAFLSGFFALVATHGLHVST 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GL+W+ +++IQ+ K+GL S N+ RL+CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 120 GLVWIIIMMIQVSKRGLTSTNKTRLMCLSLFWHFLDVVWICVFTVVYLLGVM 171
>gi|70732358|ref|YP_262114.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas fluorescens
Pf-5]
gi|68346657|gb|AAY94263.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens Pf-5]
Length = 208
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 123/183 (67%), Gaps = 5/183 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++
Sbjct: 29 TVFGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88
Query: 90 FAMLA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAMLA K+ + + WL +T FG+ FI MEI EF LIS P RS FLS FF
Sbjct: 89 FAMLAFFRGNKK---QVLGWLAMTFLFGLGFIGMEINEFHLLISEGYGPSRSGFLSGFFT 145
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GLIW+ +++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLM
Sbjct: 146 LVGTHGLHVTSGLIWMAIMMYQVQKNGLTATNKTRLSCLSLFWHFLDVVWICVFTVVYLM 205
Query: 208 GVV 210
G +
Sbjct: 206 GTM 208
>gi|229592522|ref|YP_002874641.1| cytochrome C oxidase (ubiquinol oxidase) subunit III [Pseudomonas
fluorescens SBW25]
gi|229364388|emb|CAY52170.1| cytochrome C oxidase (ubiquinol oxidase) subunit III [Pseudomonas
fluorescens SBW25]
Length = 208
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 124/183 (67%), Gaps = 5/183 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++
Sbjct: 29 TVFGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88
Query: 90 FAMLA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAMLA K+ +SWL +T FG+ FI MEI EF LIS P RS FLS+FF
Sbjct: 89 FAMLAFYKGNKK---GVLSWLALTFLFGLGFIGMEINEFHLLISEGYGPHRSGFLSAFFT 145
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GL+W+ V++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLM
Sbjct: 146 LVGTHGLHVTAGLLWMAVMMYQVNKHGLTNTNKTRLSCLSLFWHFLDVVWICVFTVVYLM 205
Query: 208 GVV 210
G +
Sbjct: 206 GTL 208
>gi|323191348|gb|EFZ76611.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
RN587/1]
Length = 171
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNVSQVISWLTLTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 120 GLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMG 169
>gi|296156345|ref|ZP_06839184.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp.
Ch1-1]
gi|295893851|gb|EFG73630.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp.
Ch1-1]
Length = 201
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 137/213 (64%), Gaps = 15/213 (7%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
M ++ I P+ + +V + GFW+YLM+DC++FA F +AV+G +A
Sbjct: 1 MLQKTIAVQPHLAPDHVPSH---------SVFGFWLYLMTDCVIFAALFAVFAVMGHQFA 51
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS--WLLVTAFFGMIF 118
GP+ D+F+I G+ + T +LLLSS++ FAML + R K V WL VT G+ F
Sbjct: 52 GGPSGKDLFEIPGVALETTMLLLSSITYGFAMLGAHKNR---KGVLLFWLAVTFLLGLAF 108
Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLIS 177
+ +E+ EF+HLI+ A P RSAFLSSFF LVG HGLHV GLIW+ VL +Q+++ + L
Sbjct: 109 LTLEMREFSHLIAEGAGPGRSAFLSSFFTLVGTHGLHVTCGLIWMVVLAVQVMRHRDLTE 168
Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ RL CLS+FWHFLD++WI VF+FVYL V+
Sbjct: 169 RDMIRLTCLSLFWHFLDVVWIGVFTFVYLASVI 201
>gi|28868535|ref|NP_791154.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213968331|ref|ZP_03396475.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tomato T1]
gi|301383463|ref|ZP_07231881.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tomato Max13]
gi|302060280|ref|ZP_07251821.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tomato K40]
gi|302129917|ref|ZP_07255907.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|28851773|gb|AAO54849.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213926969|gb|EEB60520.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tomato T1]
gi|331015176|gb|EGH95232.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 210
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV
Sbjct: 91 FAMLA-LYKGKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG+HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 150 GLHGVHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|91778472|ref|YP_553680.1| CyoC [Burkholderia xenovorans LB400]
gi|91691132|gb|ABE34330.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia xenovorans
LB400]
Length = 201
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 137/213 (64%), Gaps = 15/213 (7%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
M ++ I P+ + +V + GFW+YLM+DC++FA F +AV+G +A
Sbjct: 1 MLQKTIAVQPHLAPDHVPSH---------SVFGFWLYLMTDCVIFAALFAVFAVMGHQFA 51
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS--WLLVTAFFGMIF 118
GP+ D+F+I G+ + T +LLLSS++ FAML + R K V WL VT G+ F
Sbjct: 52 GGPSGKDLFEIPGVALETTMLLLSSITYGFAMLGAHRNR---KGVLLFWLAVTFLLGLAF 108
Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLIS 177
+ +E+ EF+HLI+ A P RSAFLSSFF LVG HGLHV GLIW+ VL +Q+++ + L
Sbjct: 109 LTLEMREFSHLIAEGAGPGRSAFLSSFFTLVGTHGLHVTCGLIWMVVLAVQVMRHRDLTE 168
Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ RL CLS+FWHFLD++WI VF+FVYL V+
Sbjct: 169 RDMIRLTCLSLFWHFLDVVWIGVFTFVYLASVI 201
>gi|238754226|ref|ZP_04615583.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia ruckeri ATCC
29473]
gi|238707473|gb|EEP99833.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia ruckeri ATCC
29473]
Length = 171
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP D+FD++ + V T +LL SS++ AML K
Sbjct: 1 MSDCILFATLFATYAVLVNGTAGGPTGKDIFDLNFVLVETFLLLFSSITYGVAMLG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
++ WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV HGLHV
Sbjct: 60 GNKNQVNIWLGMTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATHGLHVTT 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GL+W+ +++IQ+ K+GL NQ RL+CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 120 GLVWIIIMMIQVAKRGLNPTNQTRLMCLSLFWHFLDVVWICVFTVVYLLG 169
>gi|238791423|ref|ZP_04635061.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia intermedia ATCC
29909]
gi|238729039|gb|EEQ20555.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia intermedia ATCC
29909]
Length = 171
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 122/172 (70%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AML K
Sbjct: 1 MSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVLVETFLLLFSSITYGIAMLG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
++ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV HG+HV
Sbjct: 60 GHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATHGIHVTT 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 120 GLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 171
>gi|66044394|ref|YP_234235.1| cytochrome c oxidase, subunit III [Pseudomonas syringae pv.
syringae B728a]
gi|63255101|gb|AAY36197.1| Cytochrome c oxidase, subunit III [Pseudomonas syringae pv.
syringae B728a]
Length = 210
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV
Sbjct: 91 FAMLA-LYKGNKSQVLGWLALTFLCGAAFIGMEIYEFHHLIEEGYGPSRSGFLSAFFALV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 150 GLHGAHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|330811630|ref|YP_004356092.1| cytochrome o subunit III [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379738|gb|AEA71088.1| Cytochrome o subunit III [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 208
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++
Sbjct: 29 TVFGFWLYLMTDCILFASIFAAYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA + + + WL +T FG FI MEI EF LIS P RS FLS FF LV
Sbjct: 89 FAMLALFKGKKT-QVLGWLAMTFLFGAGFIGMEINEFHMLISEGYGPNRSGFLSGFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 148 GTHGLHVTSGLIWMAIMMYQVQKNGLTATNKTRLSCLSLFWHFLDVVWICVFTVVYLMGT 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|312962954|ref|ZP_07777440.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens WH6]
gi|311282723|gb|EFQ61318.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens WH6]
Length = 208
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 124/183 (67%), Gaps = 5/183 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++
Sbjct: 29 TVFGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88
Query: 90 FAMLA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAMLA K+ +SWL +T FG+ FI MEI EF LIS P RS FLS+FF
Sbjct: 89 FAMLAFYKGNKK---GVLSWLGLTFLFGLGFIGMEINEFHLLISEGYGPHRSGFLSAFFT 145
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV GL+W+ V++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLM
Sbjct: 146 LVGTHGLHVSAGLLWMAVMMYQVNKHGLTNTNKTRLSCLSLFWHFLDVVWICVFTVVYLM 205
Query: 208 GVV 210
G +
Sbjct: 206 GTL 208
>gi|238759270|ref|ZP_04620437.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia aldovae ATCC
35236]
gi|238765441|ref|ZP_04626362.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia kristensenii
ATCC 33638]
gi|238696335|gb|EEP89131.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia kristensenii
ATCC 33638]
gi|238702557|gb|EEP95107.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia aldovae ATCC
35236]
Length = 171
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 122/172 (70%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AML K
Sbjct: 1 MSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVLVETFLLLFSSITYGIAMLG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
++ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV HG+HV
Sbjct: 60 GHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATHGIHVTA 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 120 GLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 171
>gi|257487315|ref|ZP_05641356.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289623937|ref|ZP_06456891.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|289646771|ref|ZP_06478114.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. aesculi str. 2250]
gi|298485879|ref|ZP_07003955.1| Cytochrome O ubiquinol oxidase subunit III [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|298159568|gb|EFI00613.1| Cytochrome O ubiquinol oxidase subunit III [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 210
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV
Sbjct: 91 FAMLA-LYKGKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 150 GLHGAHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|289678124|ref|ZP_06499014.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. syringae FF5]
Length = 210
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI ME+YEF HLI P RS FLS+FFALV
Sbjct: 91 FAMLA-LYKGNKSQVLGWLALTFLCGAAFIGMEVYEFHHLIEEGFGPSRSGFLSAFFALV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG+HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 150 GLHGVHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|282891621|ref|ZP_06300110.1| hypothetical protein pah_c186o005 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498484|gb|EFB40814.1| hypothetical protein pah_c186o005 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 198
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 130/198 (65%), Gaps = 3/198 (1%)
Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
SLF+ + + + T LGFWIYLM+DC++F F TYAVL GP+ D+F +S
Sbjct: 4 SLFHSAEFEHET--YSRTVLGFWIYLMTDCILFTSLFTTYAVLHTETFGGPSSRDLFSLS 61
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
F T++LL SS++C AML+S + H + WL+VT G FI +E++EFA L+
Sbjct: 62 TAFSETMILLSSSVTCGLAMLSSLQNKKNH-VIGWLIVTFLLGASFIALELHEFASLVHE 120
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
QRSAFLSSFF LVG HGLHV GLIW+ V+++Q+ + + RRL+ SM+WHF
Sbjct: 121 GNSWQRSAFLSSFFTLVGTHGLHVSIGLIWMLVMILQLYFHDITTITFRRLVIFSMYWHF 180
Query: 193 LDLIWICVFSFVYLMGVV 210
LDL+WI +F+FVYL+GV+
Sbjct: 181 LDLVWIFIFTFVYLLGVI 198
>gi|160877454|ref|YP_001556770.1| cytochrome o ubiquinol oxidase subunit III [Shewanella baltica
OS195]
gi|160862976|gb|ABX51510.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
OS195]
gi|315269656|gb|ADT96509.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella baltica
OS678]
Length = 206
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 27 TLFGFWIYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLVSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A++ A + T++WL +T G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 MALIF-AKRHNKAATLTWLAITFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|320173752|gb|EFW48935.1| Cytochrome O ubiquinol oxidase subunit III [Shigella dysenteriae
CDC 74-1112]
gi|332098473|gb|EGJ03439.1| cytochrome o ubiquinol oxidase, subunit III [Shigella boydii
3594-74]
Length = 171
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNKSQVISWLALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 120 GLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMG 169
>gi|186470620|ref|YP_001861938.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum
STM815]
gi|184196929|gb|ACC74892.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum
STM815]
Length = 204
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 122/201 (60%), Gaps = 1/201 (0%)
Query: 6 IGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP 65
+ +P ++ D + D T LGFWIYLMSDCL+FA F T+ VL A GPA
Sbjct: 1 MANTPTYAAAAHHDARGHHDDGTRTTLGFWIYLMSDCLIFATLFATFGVLANATAGGPAG 60
Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125
+F++ + T++LL SS + ML+ R + WL VT G FI ME+YE
Sbjct: 61 RQLFELPYVLGETLLLLASSFTFGMGMLSVYANRR-GTVIGWLAVTFVLGAAFIGMEVYE 119
Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185
FA L S A P SAFLS +F LVG HGLHV GL+W+ V++ QI + GL +RR+ C
Sbjct: 120 FAKLASDGAGPSTSAFLSGYFTLVGTHGLHVTTGLLWIGVMMHQIGRFGLTPVTRRRIAC 179
Query: 186 LSMFWHFLDLIWICVFSFVYL 206
LS+FWHFLDL+WICVFS VYL
Sbjct: 180 LSLFWHFLDLVWICVFSLVYL 200
>gi|302186054|ref|ZP_07262727.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. syringae 642]
Length = 210
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI ME+YEF HLI P RS FLS+FFALV
Sbjct: 91 FAMLA-LYKGNKSQVLGWLALTFLCGAAFIGMEVYEFHHLIHEGYGPSRSGFLSAFFALV 149
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG+HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 150 GLHGVHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209
Query: 210 V 210
+
Sbjct: 210 L 210
>gi|330819564|ref|YP_004348426.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia gladioli
BSR3]
gi|327371559|gb|AEA62914.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia gladioli
BSR3]
Length = 201
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D T +GFWIYLMSDCL+FA F T+ VL A GP +F++ + T++LL+SS
Sbjct: 18 DGGKTTVGFWIYLMSDCLIFATLFATFGVLANATAGGPTGQGLFELDYVLGETMLLLVSS 77
Query: 86 LSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
+ AMLA +A +R ++WL +T FG FI ME++EFA L++ A P SAFLS+
Sbjct: 78 FTFGLAMLAMNAGRR--GAVIAWLAITFVFGAGFIGMEVHEFAKLVADGAGPHTSAFLSA 135
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
+F LVG HGLHV GL+W+ V++ Q+ K GL QRRL CLSMFWHFLDL+WICVF+FV
Sbjct: 136 YFGLVGTHGLHVTCGLLWIGVMMHQVWKFGLNGMVQRRLACLSMFWHFLDLVWICVFTFV 195
Query: 205 YL 206
YL
Sbjct: 196 YL 197
>gi|238795550|ref|ZP_04639065.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia mollaretii ATCC
43969]
gi|238720669|gb|EEQ12470.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia mollaretii ATCC
43969]
Length = 171
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 122/172 (70%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AML K
Sbjct: 1 MSDCILFATLFATYAVLVNGTAGGPSGKDIFDLNFVLVETFLLLFSSITYGIAMLG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
++ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV HG+HV
Sbjct: 60 GHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATHGIHVTA 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 120 GLVWIIIMMIQVAKRGLNEMNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 171
>gi|313497177|gb|ADR58543.1| CyoC [Pseudomonas putida BIRD-1]
Length = 202
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F TYAVL ++A GP+ D+F + + V T++LLLSS++
Sbjct: 23 TVLGFWLYLMTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLLLLLSSITFG 82
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAML + + WL VT FG FI MEIYEF HLIS PQRS FLS FFALV
Sbjct: 83 FAMLKMFDGKKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLISEGFGPQRSGFLSGFFALV 141
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV
Sbjct: 142 GTHGLHVTAGLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGV 201
Query: 210 V 210
+
Sbjct: 202 L 202
>gi|71734182|ref|YP_273478.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71554735|gb|AAZ33946.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|320323023|gb|EFW79113.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. glycinea str. B076]
gi|320329854|gb|EFW85842.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 208
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 29 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV
Sbjct: 89 FAMLA-LYKGKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHG HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 148 GLHGAHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|312964548|ref|ZP_07778804.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
2362-75]
gi|307628101|gb|ADN72405.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UM146]
gi|312290782|gb|EFR18659.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
2362-75]
Length = 171
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 120 GLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMG 169
>gi|238787999|ref|ZP_04631795.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia frederiksenii
ATCC 33641]
gi|238723947|gb|EEQ15591.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia frederiksenii
ATCC 33641]
Length = 171
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 122/172 (70%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AML K
Sbjct: 1 MSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVLVETFLLLFSSITYGIAMLG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
++ +WL +T FG+ F+ MEIYEF HLI+ P RSAFLSSFFALV HG+HV
Sbjct: 60 GHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYGPDRSAFLSSFFALVATHGIHVTA 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 120 GLVWIIIMMIQVAKRGLNEMNRTRLMCLSLFWHFLDVVWICVFTVVYLLGAM 171
>gi|224826960|ref|ZP_03700058.1| cytochrome o ubiquinol oxidase, subunit III [Lutiella nitroferrum
2002]
gi|224600793|gb|EEG06978.1| cytochrome o ubiquinol oxidase, subunit III [Lutiella nitroferrum
2002]
Length = 204
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLM+DC++FA F YAVL N G A ++F++ + V T LL SS++
Sbjct: 25 TQLGFWLYLMTDCILFASAFAAYAVLFGNVNGGVAGKEIFELKYVLVETFALLFSSITYG 84
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAM+ S K + WL VT FG +FI ME++EF LI+ P +SAFLS FFALV
Sbjct: 85 FAMI-SGHKGSKAGLLGWLAVTFLFGAVFIGMELHEFGTLIAEGHGPDKSAFLSGFFALV 143
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ V++++++K GL RL CLSMFWHFLD++WICVF+ VYL G
Sbjct: 144 GMHGLHVTAGLIWMAVMMLEVIKTGLTGRAMTRLNCLSMFWHFLDIVWICVFTVVYLKGA 203
Query: 210 V 210
+
Sbjct: 204 I 204
>gi|46446825|ref|YP_008190.1| cytochrome o ubiquinol oxidase chain III cyoC [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400466|emb|CAF23915.1| probable cytochrome o ubiquinol oxidase chain III cyoC [Candidatus
Protochlamydia amoebophila UWE25]
Length = 211
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
TY GFW+YLM+DCL+FA F TYAVL K+ GP+ ++F + F+ T++LLLSS++C
Sbjct: 32 TYFGFWMYLMTDCLLFATLFCTYAVLHKSTFGGPSSHELFQLPTAFIETLILLLSSMTCG 91
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
+MLA A K + WL++T G F+ +EI EF+ LI RSAFLSSFF LV
Sbjct: 92 LSMLA-AVKSQKKYVIGWLIITFCLGSSFLFLEIQEFSLLIREGNGFDRSAFLSSFFTLV 150
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLH+ FGL+W+ V++ Q++ +G+ RRL S+FWHFLDLIWI +F+FVYL+GV
Sbjct: 151 GTHGLHITFGLLWMIVMIAQVIYQGITLSTFRRLALFSLFWHFLDLIWISIFTFVYLLGV 210
Query: 210 V 210
Sbjct: 211 A 211
>gi|183601052|ref|ZP_02962545.1| hypothetical protein PROSTU_04674 [Providencia stuartii ATCC 25827]
gi|188019391|gb|EDU57431.1| hypothetical protein PROSTU_04674 [Providencia stuartii ATCC 25827]
Length = 204
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFW+Y+MSD ++FA F TY VL A GP D+F +S + T +LL S
Sbjct: 20 DAGGTKVFGFWLYIMSDLILFACLFATYVVLADGTAGGPEGKDIFSLSFVLGETFLLLFS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ FAMLA ++ + WL VT G+ F+IME+YEF LI+ P RS FLS
Sbjct: 80 SITYGFAMLAMHKGKIASVNL-WLFVTFLLGLGFVIMEVYEFHELIAEGYGPDRSGFLSG 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FF LV HG+HV GL+W+ +++IQ+ ++GL NQ RL CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFTLVATHGIHVTCGLVWIIIMIIQVSRRGLTEVNQTRLNCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YL+G +
Sbjct: 199 YLLGAI 204
>gi|262372201|ref|ZP_06065480.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter junii
SH205]
gi|262312226|gb|EEY93311.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter junii
SH205]
Length = 206
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 124/184 (67%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHIPPGTPSAKDLFGDSLGFVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ ++WL VT FG FI MEIYEF HL+ P SAFLS+FF
Sbjct: 84 TFGFAVLASYKKN-VNQVIAWLFVTFLFGATFIGMEIYEFQHLVHAGHGPTHSAFLSAFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI K GL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMLVLMYQIKKNGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
MGV+
Sbjct: 203 MGVL 206
>gi|94676901|ref|YP_588719.1| cytochrome o ubiquinol oxidase, subunit III [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220051|gb|ABF14210.1| cytochrome o ubiquinol oxidase, subunit III [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 203
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWIYLMSDC++FA+ F TY VL + A GP+ ++F++ + T LLLSSL+ A
Sbjct: 26 LGFWIYLMSDCILFAMLFATYVVLSHSIAGGPSGKEIFELPAVQFETFCLLLSSLTYGIA 85
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+LA K+ + + WL T G+ FII+EI EF +LI P RSAFLS FF+LV
Sbjct: 86 ILAMYRKQ-NNSVILWLFCTFILGLGFIIVEIMEFYNLIINGFGPNRSAFLSGFFSLVAT 144
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV GLIW+ V+++ + KKGL NQ RL CLS+FWHFLD+IWICVF+ VYL+GV+
Sbjct: 145 HGCHVISGLIWIMVMIVHVYKKGLTLDNQIRLQCLSLFWHFLDIIWICVFTVVYLLGVL 203
>gi|238750998|ref|ZP_04612494.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia rohdei ATCC
43380]
gi|238710688|gb|EEQ02910.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia rohdei ATCC
43380]
Length = 171
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL A GP+ D+FD++ + V T +LL SS++ AML K
Sbjct: 1 MSDCILFATLFATYAVLVNGTAGGPSGKDIFDLNFVLVETFLLLFSSITYGIAMLG-MNK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
++ +WL +T FG+ F+ MEIYEF HLI P RSAFLSSFFALV HG+HV
Sbjct: 60 GHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIVEGYGPDRSAFLSSFFALVATHGIHVTA 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 120 GLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDVVWICVFTVVYLLG 169
>gi|194289182|ref|YP_002005089.1| cytochrome o ubiquinol oxidase subunit iii [Cupriavidus taiwanensis
LMG 19424]
gi|193223017|emb|CAQ69022.1| cytochrome o ubiquinol oxidase, subunit III [Cupriavidus
taiwanensis LMG 19424]
Length = 214
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 124/179 (69%), Gaps = 1/179 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLMSDC++FA F +AVL A GP+ ++F+++ + V T +LL SS++
Sbjct: 35 TVYGFWIYLMSDCIIFAGLFAAFAVLRGELAGGPSAKELFELNYVLVETFILLFSSITYG 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AM++ + L H +WL +T G+ F+ MEI EF HLI+ A P RSAFLSSFF LV
Sbjct: 95 MAMISLQNRSLKH-VQTWLGITFLLGLAFMAMEINEFHHLIAEGAGPGRSAFLSSFFTLV 153
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G HGLHV G++W+ VL+ Q+ KKG+ +RL+CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 154 GTHGLHVASGMLWMIVLMWQLGKKGITPTLSKRLMCLSLFWHFLDVVWIGVFTVVYLMG 212
>gi|197363323|ref|YP_002142960.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|197094800|emb|CAR60333.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 171
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MHK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNKSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG
Sbjct: 120 GLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMG 169
>gi|212709188|ref|ZP_03317316.1| hypothetical protein PROVALCAL_00221 [Providencia alcalifaciens DSM
30120]
gi|212688100|gb|EEB47628.1| hypothetical protein PROVALCAL_00221 [Providencia alcalifaciens DSM
30120]
Length = 204
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSD ++FA F TY VL A GPA D+F + + T +LL SS++ FAM
Sbjct: 28 GFWIYLMSDLILFASLFATYVVLSDGTAGGPAGRDIFSLQFVLGETFLLLFSSITYGFAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A +++ + WL +T FG+ F++ME+YEF LI+ P RS FLS+FFALV H
Sbjct: 88 IAMHKEKVAAVNL-WLFITFLFGLGFVVMEVYEFHELIAEGYGPDRSGFLSAFFALVATH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GL+W+ +++IQ ++GL + N+ RL CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 147 GIHVTCGLVWIILMIIQNCRRGLTAVNKTRLNCLSLFWHFLDVVWICVFTVVYLLGAI 204
>gi|268592044|ref|ZP_06126265.1| cytochrome o ubiquinol oxidase, subunit III [Providencia rettgeri
DSM 1131]
gi|291312437|gb|EFE52890.1| cytochrome o ubiquinol oxidase, subunit III [Providencia rettgeri
DSM 1131]
Length = 204
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 124/186 (66%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFW+Y+MSD ++FA F TY VL A GPA D+F + + T +LL+S
Sbjct: 20 DAGGTKVFGFWLYIMSDLILFACLFATYVVLADGTAGGPAGKDIFSLKFVLGETFLLLVS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ FAM+A ++ + WL T G+ F+IMEIYEF LI+ P RS FLS
Sbjct: 80 SITYGFAMIAMHKGKIAAVNL-WLFATFLLGLGFVIMEIYEFHELIAEGFGPDRSGFLSG 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALV HGLHV GLIW+ +++IQ+ ++GL N+ RL CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVATHGLHVTAGLIWIIIMMIQVTRRGLTDVNKTRLNCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YL+G +
Sbjct: 199 YLLGAI 204
>gi|297516403|ref|ZP_06934789.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli OP50]
gi|307137073|ref|ZP_07496429.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli H736]
gi|312970525|ref|ZP_07784706.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
1827-70]
gi|310337174|gb|EFQ02312.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
1827-70]
gi|313646948|gb|EFS11405.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri 2a
str. 2457T]
gi|320181588|gb|EFW56503.1| Cytochrome O ubiquinol oxidase subunit III [Shigella boydii ATCC
9905]
gi|320192844|gb|EFW67484.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. EC1212]
gi|323157116|gb|EFZ43240.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
EPECa14]
gi|323160460|gb|EFZ46408.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
E128010]
gi|323164229|gb|EFZ50036.1| cytochrome o ubiquinol oxidase, subunit III [Shigella sonnei 53G]
gi|323178302|gb|EFZ63880.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 1180]
gi|326341192|gb|EGD64984.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. 1044]
gi|326346033|gb|EGD69772.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli
O157:H7 str. 1125]
gi|327254756|gb|EGE66372.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli
STEC_7v]
gi|332085695|gb|EGI90859.1| cytochrome o ubiquinol oxidase, subunit III [Shigella dysenteriae
155-74]
gi|332760716|gb|EGJ91004.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
4343-70]
gi|332763721|gb|EGJ93959.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
K-671]
gi|332768346|gb|EGJ98530.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri
2930-71]
Length = 171
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 120 GLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMG 169
>gi|260549405|ref|ZP_05823624.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter sp.
RUH2624]
gi|260407514|gb|EEX00988.1| heme/copper-type cytochrome/quinol oxidase [Acinetobacter sp.
RUH2624]
Length = 206
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 124/184 (67%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISGIFVSTIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + AG P+ D+F + + T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHVPAGTPSAYDLFHNSLGYVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ ++WL +T FG FI ME+YEF HL+ P SAFLSSFF
Sbjct: 84 TFGFAVLASYKKN-VNQVITWLFITFLFGATFIGMELYEFHHLVEEGHGPTHSAFLSSFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI KGL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMLVLMYQIKTKGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
+GV+
Sbjct: 203 LGVL 206
>gi|295701243|ref|YP_003610244.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia sp.
CCGE1002]
gi|295441566|gb|ADG20733.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia sp.
CCGE1002]
Length = 203
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 128/184 (69%), Gaps = 4/184 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T++VL +A GP D+FD+S + + T VLLL
Sbjct: 17 DHPQSHSVFGFWVYLMTDCMLFAALFATFSVLRHQFAGGPTGHDLFDLSDVALGTSVLLL 76
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SS++ FAML R + WL++T G +F+ +E+ EF+ LI+ A PQRSAFLS
Sbjct: 77 SSITYGFAMLDVLRAR-SGVVLGWLVITFILGALFLALELREFSQLIAEGAGPQRSAFLS 135
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHFLDLIWICVFS 202
+FF LV HG+HVFFGL+W+ VL++Q+L+ + RRL CLS+FWHFLD++WI VFS
Sbjct: 136 AFFTLVTAHGIHVFFGLLWMLVLMMQVLRVPQFGEQEVRRLTCLSLFWHFLDVVWIFVFS 195
Query: 203 FVYL 206
FVYL
Sbjct: 196 FVYL 199
>gi|262375301|ref|ZP_06068534.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter lwoffii
SH145]
gi|262309555|gb|EEY90685.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter lwoffii
SH145]
Length = 206
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 126/184 (68%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLVLFGTLFIAFAVLSSHIPVGTPSARDLFGDSLGFVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LA A K+ + K ++WL +T FG IFI ME+YEF HL+ P SAFLS+FF
Sbjct: 84 TFGFAVLA-AYKKDVAKVLTWLAITWVFGAIFIGMELYEFNHLVHAGHGPSTSAFLSAFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL++QI K GL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMIVLMVQIKKYGLTLANTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
MGV+
Sbjct: 203 MGVL 206
>gi|315500562|ref|YP_004089364.1| cytochrome o ubiquinol oxidase, subunit III [Asticcacaulis
excentricus CB 48]
gi|315418574|gb|ADU15213.1| cytochrome o ubiquinol oxidase, subunit III [Asticcacaulis
excentricus CB 48]
Length = 225
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 136/227 (59%), Gaps = 19/227 (8%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTY-----------------LGFWIYLMSDCL 43
MS + + N + K + ES DH+ LGFWIYLMSDCL
Sbjct: 1 MSSTPVNPAEN-PVGAFKQQLESAYDHNPNDVHDTHDHHHHDEEAKVTLGFWIYLMSDCL 59
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA F TYAVL A GP ++FD+ + + T +LLLSSL+ +M++ +L +
Sbjct: 60 IFATLFATYAVLKDATAGGPNGRELFDLGFVAIETSLLLLSSLTFGLSMISMQNNKL-NG 118
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
+ WL VT G+ F+ ME+YEF HLI A P RSAFLS+FF LVG HGLHV GLIW+
Sbjct: 119 VLGWLAVTGLLGLGFMGMELYEFNHLIHEGAGPDRSAFLSAFFTLVGTHGLHVTSGLIWM 178
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
V+ + + ++GL N+ R++ LS+FWHFLD+IWI VFS VYLMG
Sbjct: 179 GVMFVHLFRRGLTPANRIRMMELSLFWHFLDIIWIGVFSIVYLMGAA 225
>gi|301058579|ref|ZP_07199584.1| cytochrome o ubiquinol oxidase, subunit III [delta proteobacterium
NaphS2]
gi|300447311|gb|EFK11071.1| cytochrome o ubiquinol oxidase, subunit III [delta proteobacterium
NaphS2]
Length = 204
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD +F+ F T+AV+G NYA GP+ D+F + +F T++LL+SS +C F M
Sbjct: 28 GFWVYLMSDLALFSALFATFAVVGFNYAGGPSGKDLFHLPYLFGETMLLLVSSAACGFTM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA R + L+VT G+ FI MEI+EF +++ P+RSAFLS+FF LVG H
Sbjct: 88 LAVHGGRKARVQLG-LVVTFLLGLGFITMEIHEFYGMVAGGNGPERSAFLSAFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV FGLIW+ VL+ Q+ KGL + + RL+ LSMFWHFLD++W+ VFS VYLMGV+
Sbjct: 147 GIHVSFGLIWMAVLMGQVTAKGLSTPVRSRLMRLSMFWHFLDIVWVGVFSVVYLMGVI 204
>gi|293609457|ref|ZP_06691759.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827909|gb|EFF86272.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122719|gb|ADY82242.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter
calcoaceticus PHEA-2]
Length = 206
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 125/184 (67%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + AG P+ D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHVPAGTPSAYDLFHDSLGFVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ ++WL +T FG FI ME+YEF HL+ P SAFLSSFF
Sbjct: 84 TFGFAVLASYKKN-VNQVITWLFITFLFGASFIGMEVYEFHHLVHEGHGPTHSAFLSSFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI KGL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMLVLMYQIKTKGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
+GV+
Sbjct: 203 LGVL 206
>gi|261346372|ref|ZP_05974016.1| cytochrome o ubiquinol oxidase, subunit III [Providencia
rustigianii DSM 4541]
gi|282565689|gb|EFB71224.1| cytochrome o ubiquinol oxidase, subunit III [Providencia
rustigianii DSM 4541]
Length = 204
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 124/186 (66%), Gaps = 2/186 (1%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D GT + GFW+Y+MSD ++FA F TY VL A GP D+F + + T +LL+S
Sbjct: 20 DAGGTKVFGFWLYIMSDLILFACLFATYVVLADGTAGGPEGKDIFSLKFVLGETFLLLVS 79
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
S++ FAM+A ++ + V WL T G+ F+IME+YEF LI+ P RS FLS
Sbjct: 80 SITYGFAMIAMHKGKIAYVNV-WLFATFLLGLGFVIMEVYEFHELIAEGFGPDRSGFLSG 138
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
FFALV HGLHV GL+W+ +++IQI ++GL N+ RL CLS+FWHFLD++WICVF+ V
Sbjct: 139 FFALVATHGLHVSAGLVWIIIMMIQISRRGLTEVNKTRLNCLSLFWHFLDVVWICVFTVV 198
Query: 205 YLMGVV 210
YL+G +
Sbjct: 199 YLLGAI 204
>gi|94309895|ref|YP_583105.1| cytochrome c oxidase subunit III [Cupriavidus metallidurans CH34]
gi|93353747|gb|ABF07836.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus
metallidurans CH34]
Length = 214
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+ T GFW+YLMSDC++FA F +AVL A GP+ ++F+++ + V T +LL SS++
Sbjct: 33 ENTVFGFWLYLMSDCILFACLFAAFAVLRGEVAGGPSGKEIFELNYVLVETAILLFSSIT 92
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
FAM+ S + + WL VT G F+ MEI EFAHLI A P RSAFLSSFF
Sbjct: 93 YGFAMV-SMQNHQKGRVMFWLGVTFLLGAAFMGMEINEFAHLIHEGAGPSRSAFLSSFFT 151
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LVG HGLHV G++W+ VL+ Q+ KKGL +RL CLS+FWHFLD++WI VF+ VYLM
Sbjct: 152 LVGTHGLHVASGMLWMLVLMWQLSKKGLTPVVAKRLNCLSLFWHFLDVVWIGVFTVVYLM 211
Query: 208 GVV 210
G +
Sbjct: 212 GAM 214
>gi|33519708|ref|NP_878540.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Blochmannia
floridanus]
gi|33504053|emb|CAD83314.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Blochmannia
floridanus]
Length = 196
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 130/194 (67%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP-APIDVFDISGIFVS 77
+K ++ T GFW+Y+MSDC++FA F +AVL N+ ++F ++ +F
Sbjct: 5 NKNIKLNTNNTTIFGFWLYIMSDCILFASLFAMHAVLSTNFQKDLLISNNIFKLTFVFTE 64
Query: 78 TIVLLLSSLSCSFAML-ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
TI+LLLSS++CS +M+ A+ T KT+ W+++T G+ FI MEIYEF HLI+ + P
Sbjct: 65 TILLLLSSITCSTSMIYANITNP--KKTLQWMILTLLLGLGFISMEIYEFHHLIANKYNP 122
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
R+AF SSFF L+G HG+HV GLIW+ ++ I ++ GL N RL C S+FWHFLD+I
Sbjct: 123 SRNAFFSSFFVLIGTHGIHVITGLIWIIIMTIHLIMTGLTQQNLIRLHCFSLFWHFLDII 182
Query: 197 WICVFSFVYLMGVV 210
WICVF+ VYL+GV+
Sbjct: 183 WICVFTEVYLIGVL 196
>gi|239906127|ref|YP_002952866.1| cytochrome o ubiquinol oxidase subunit III [Desulfovibrio
magneticus RS-1]
gi|239795991|dbj|BAH74980.1| cytochrome o ubiquinol oxidase subunit III [Desulfovibrio
magneticus RS-1]
Length = 210
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F+ F TY V+ NYA GP P D+F++ + V T++LL SS + AM
Sbjct: 33 GFWLYLMSDLIVFSALFATYVVMAHNYAGGPTPKDLFELPAVLVETMLLLTSSAAYGLAM 92
Query: 93 LASATKRLIHKTVSWLLVTAF-FGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+A L ++V LV AF G+ F++ME+ EF H I + A P RS FLS+FF LVG
Sbjct: 93 VAMHKGDL--RSVRLGLVAAFALGLGFLVMELAEFHHFIGIGAGPDRSGFLSAFFTLVGT 150
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV FGL+W+ V++ Q+ KGL + + RL L MFWHFLD++WI VF+ VYL+GVV
Sbjct: 151 HGLHVTFGLLWIVVMLAQLASKGLTAPVKGRLTRLGMFWHFLDIVWIGVFTVVYLLGVV 209
>gi|205351752|ref|YP_002225553.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207855921|ref|YP_002242572.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|224582279|ref|YP_002636077.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|205271533|emb|CAR36351.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|206707724|emb|CAR32009.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|224466806|gb|ACN44636.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261245724|emb|CBG23521.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|301157052|emb|CBW16536.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|322614719|gb|EFY11648.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322618825|gb|EFY15713.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322623532|gb|EFY20371.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322629170|gb|EFY25949.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322631890|gb|EFY28644.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322637373|gb|EFY34075.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322664720|gb|EFY60913.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322669227|gb|EFY65377.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322670772|gb|EFY66905.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322678989|gb|EFY75044.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322682017|gb|EFY78042.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322685154|gb|EFY81151.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323192953|gb|EFZ78176.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323196965|gb|EFZ82107.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323203950|gb|EFZ88967.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323206965|gb|EFZ91918.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323210817|gb|EFZ95689.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323214508|gb|EFZ99259.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323223065|gb|EGA07408.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323227014|gb|EGA11195.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323230168|gb|EGA14288.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323233906|gb|EGA17995.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323238400|gb|EGA22458.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323244088|gb|EGA28097.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323246248|gb|EGA30231.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251874|gb|EGA35737.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323261116|gb|EGA44708.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323264954|gb|EGA48453.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323272517|gb|EGA55924.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326626787|gb|EGE33130.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 171
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MHK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ +SWL +T FG FI ME+YEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNKSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ VYLMG +
Sbjct: 120 GLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVVYLMGAM 171
>gi|296533147|ref|ZP_06895776.1| cytochrome c oxidase, subunit III [Roseomonas cervicalis ATCC
49957]
gi|296266519|gb|EFH12515.1| cytochrome c oxidase, subunit III [Roseomonas cervicalis ATCC
49957]
Length = 212
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWIYLMSDC++FA F TYAVL A GP +FD+ +F T++LL SS++
Sbjct: 35 LGFWIYLMSDCILFAGIFATYAVLSHATAGGPDGHALFDLPYVFTETMILLASSITYGMG 94
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
MLA+ R +SWL +TA G+ F+ ME+ EF H+I+ A P RSAFLS+FF LVG
Sbjct: 95 MLAAVRGRR-RVALSWLGLTALLGLAFLAMELNEFHHMIAEGAGPDRSAFLSAFFTLVGT 153
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV GL+WL VL+ Q+ KGL N RL CLSMFWHFLD+IWI VF+ VYL+GV+
Sbjct: 154 HGLHVTAGLLWLGVLMAQVAVKGLSDTNLTRLNCLSMFWHFLDVIWIGVFTIVYLLGVL 212
>gi|113867093|ref|YP_725582.1| bo3-type quinol oxidase, subunit III [Ralstonia eutropha H16]
gi|113525869|emb|CAJ92214.1| bo3-type quinol oxidase, subunit III [Ralstonia eutropha H16]
Length = 214
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLMSDC++FA F +AVL A GP+ ++F+++ + V T +LL SS++
Sbjct: 35 TVYGFWIYLMSDCIIFAGLFAAFAVLRGELAGGPSAKELFELNYVLVETFILLFSSITYG 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AM+ S R + + WL VT G F+ MEI EF HLI+ A P RSAFLSSFF LV
Sbjct: 95 MAMI-SLQNRSLSRVQVWLGVTFLLGAAFMAMEINEFHHLIAEGAGPGRSAFLSSFFTLV 153
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G HGLHV G++W+ VL+ Q+ KKG+ +RL+CLS+FWHFLD++WI VF+ VYLMG
Sbjct: 154 GTHGLHVASGMLWMIVLMWQLSKKGITPTLSKRLMCLSLFWHFLDVVWIGVFTVVYLMG 212
>gi|77460867|ref|YP_350374.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens Pf0-1]
gi|77384870|gb|ABA76383.1| cytochrome bo3 quinol oxidase subunit 3 [Pseudomonas fluorescens
Pf0-1]
Length = 208
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++
Sbjct: 29 TVYGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
FAMLA K + + WL +T G FI MEI EF LIS P RS FLS+FF LV
Sbjct: 89 FAMLA-LYKGKKQQVLGWLFMTFLLGAGFIAMEINEFHLLISEGFGPSRSGFLSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ +++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 148 GTHGLHVSAGLIWMGIMMYQVNKHGLTATNKTRLSCLSLFWHFLDVVWICVFTVVYLMGT 207
Query: 210 V 210
+
Sbjct: 208 L 208
>gi|17224968|gb|AAL37190.1|AF321090_2 cytochrome o ubiquinol oxidase C [Pseudomonas putida]
Length = 201
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 25 VDHDG---TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVL 81
+ HD T GFW+YLM+DC++FA F YAVL N A GP+ ++F++ + T +L
Sbjct: 14 ITHDSGKMTVYGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHEIFELPYVLGETALL 73
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
L SS++ FAMLA K + WL +T G FI MEI EF LIS P RS F
Sbjct: 74 LFSSITYGFAMLA-LYKGKKQAVLGWLFMTFLLGAGFIAMEINEFHLLISEGFGPSRSGF 132
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
LS+FF LVG HGLHV GLIW+ +++ Q+ K GL S N+ RL CLS+FWHFLD++WICVF
Sbjct: 133 LSAFFTLVGTHGLHVSAGLIWMGIMMYQVNKHGLTSTNKTRLSCLSLFWHFLDVVWICVF 192
Query: 202 SFVYLMGVV 210
+ VYLMG +
Sbjct: 193 TVVYLMGTL 201
>gi|255319503|ref|ZP_05360717.1| cytOchrome o ubiquinol oxidase, subunit III [Acinetobacter
radioresistens SK82]
gi|262378473|ref|ZP_06071630.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter
radioresistens SH164]
gi|255303443|gb|EET82646.1| cytOchrome o ubiquinol oxidase, subunit III [Acinetobacter
radioresistens SK82]
gi|262299758|gb|EEY87670.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter
radioresistens SH164]
Length = 206
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 124/184 (67%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPSAGDLFGDSLGFVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K + + ++WL VT FG FI ME+YEF HL+ P SAFLSSFF
Sbjct: 84 TFGFAVLASYKKN-VGQVIAWLAVTWLFGASFIGMELYEFNHLVHEGYGPTTSAFLSSFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ +L+IQI K GL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMIILMIQIKKNGLTLPNMRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
MGV+
Sbjct: 203 MGVL 206
>gi|162147817|ref|YP_001602278.1| cytochrome o ubiquinol oxidase subunit 3 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542440|ref|YP_002274669.1| cytochrome o ubiquinol oxidase subunit III [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786394|emb|CAP55976.1| putative cytochrome o ubiquinol oxidase subunit 3
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530117|gb|ACI50054.1| cytochrome o ubiquinol oxidase, subunit III [Gluconacetobacter
diazotrophicus PAl 5]
Length = 201
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DCL+F F +AV+ +A GP D+F+++G+ + T +LL+SS++ FAM
Sbjct: 24 GFWLYLMTDCLIFGTLFAVFAVMRTQFAGGPTGKDLFELNGVGIETALLLVSSITYGFAM 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ +A K + WL++T G+ F+ MEI EF+H+++ P RSAFLSSFF LVG H
Sbjct: 84 I-NAHKNKLGAMRGWLVLTFLMGLGFLFMEIREFSHMVAEGNGPDRSAFLSSFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGN-QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VL++Q + + ++S +L CLS+FWHFLD++WICVF+FVYLM V+
Sbjct: 143 GLHVTCGLLWMAVLMVQSMGQTVLSERMMNKLTCLSLFWHFLDIVWICVFTFVYLMSVI 201
>gi|330993477|ref|ZP_08317412.1| Cytochrome o ubiquinol oxidase subunit 3 [Gluconacetobacter sp.
SXCC-1]
gi|329759507|gb|EGG76016.1| Cytochrome o ubiquinol oxidase subunit 3 [Gluconacetobacter sp.
SXCC-1]
Length = 197
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 124/181 (68%), Gaps = 6/181 (3%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AVL +A GP +VF++SG+ + T +LL SS++ F M
Sbjct: 20 GFWLYLMTDCIIFGTLFAVFAVLRDQFAGGPTGHEVFELSGVGIETAILLFSSITYGFGM 79
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A+ + + +WL VT G+ F+ MEI EF+H+I+ P RSAFLSSFF LVG H
Sbjct: 80 IAAHENK-VSTMRTWLGVTFLLGLGFLFMEIREFSHMIAEGNGPDRSAFLSSFFTLVGTH 138
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQR---RLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV GL+W+ VL+ Q K + N+R +L CLS+FWHFLD++WICVF+FVYLM V
Sbjct: 139 GLHVTCGLLWMAVLLFQTAGKTEL--NERMIGKLTCLSLFWHFLDIVWICVFTFVYLMSV 196
Query: 210 V 210
+
Sbjct: 197 I 197
>gi|169633241|ref|YP_001706977.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
SDF]
gi|169795507|ref|YP_001713300.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
AYE]
gi|184158691|ref|YP_001847030.1| Heme/copper-type cytochrome/quinol oxidase subunit 3 [Acinetobacter
baumannii ACICU]
gi|215482994|ref|YP_002325199.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii AB307-0294]
gi|239501441|ref|ZP_04660751.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii AB900]
gi|260554569|ref|ZP_05826790.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter baumannii
ATCC 19606]
gi|301345101|ref|ZP_07225842.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
AB056]
gi|301510827|ref|ZP_07236064.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
AB058]
gi|301595310|ref|ZP_07240318.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
AB059]
gi|332850730|ref|ZP_08432977.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii 6013150]
gi|332866969|ref|ZP_08437286.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii 6013113]
gi|332873683|ref|ZP_08441626.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii 6014059]
gi|169148434|emb|CAM86300.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
AYE]
gi|169152033|emb|CAP00913.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter
baumannii]
gi|183210285|gb|ACC57683.1| Heme/copper-type cytochrome/quinol oxidase, subunit 3
[Acinetobacter baumannii ACICU]
gi|193077737|gb|ABO12595.2| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
ATCC 17978]
gi|213987145|gb|ACJ57444.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii AB307-0294]
gi|260411111|gb|EEX04408.1| cytochrome aa3 quinol oxidase, subunit III [Acinetobacter baumannii
ATCC 19606]
gi|322507499|gb|ADX02953.1| cyoC [Acinetobacter baumannii 1656-2]
gi|323518605|gb|ADX92986.1| Heme/copper-type cytochrome/quinol oxidase, subunit 3
[Acinetobacter baumannii TCDC-AB0715]
gi|332730567|gb|EGJ61883.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii 6013150]
gi|332734298|gb|EGJ65426.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii 6013113]
gi|332738071|gb|EGJ68955.1| cytochrome o ubiquinol oxidase, subunit III [Acinetobacter
baumannii 6014059]
Length = 206
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISGIFVSTIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F + + T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHVPPGTPSAYDLFHESLGYVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ ++WL +T FG FI ME+YEF HL+ P SAFLSSFF
Sbjct: 84 TFGFAVLASYKKN-VNQVITWLFITFLFGATFIGMELYEFHHLVEEGHGPTHSAFLSSFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI KGL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMLVLMYQIKTKGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
+GV+
Sbjct: 203 LGVL 206
>gi|299067542|emb|CBJ38742.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum
CMR15]
Length = 212
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 124/180 (68%), Gaps = 7/180 (3%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T LGFW+YLMSDCL+FAV F T+ VL + A GP +F++ +F T++LL+SS +
Sbjct: 33 TTLGFWLYLMSDCLIFAVLFATFGVLSGSTAGGPGGRQLFELPFVFAETMLLLVSSYTFG 92
Query: 90 FAML---ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
A+L A A R+ V WL VT G +F+ ME+YEF+HL+ A P SA+LS+FF
Sbjct: 93 IALLKQDADAAPRM----VRWLGVTFLLGALFVGMELYEFSHLLHEGAGPGVSAYLSAFF 148
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HGLHV GL+WL V++ Q+ + GL +RRL CLS+FWHFLDL+WICVF+FVYL
Sbjct: 149 TLVGTHGLHVTAGLLWLAVMMHQVRRFGLDGVVRRRLACLSLFWHFLDLVWICVFTFVYL 208
>gi|319424517|gb|ADV52591.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella
putrefaciens 200]
Length = 206
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++
Sbjct: 27 TLFGFWIYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELDFVLIETAALLVSSITYG 86
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A++ A + T WL +T G +FI ME+YEF HLI PQRSAFLSSFF LV
Sbjct: 87 MALI-FAKRHNKAATFVWLAITFALGCVFIGMEVYEFHHLIEHGNGPQRSAFLSSFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G+HGLHV GLIW+ +++I++ K GL + RL CLS+FWHFLD++WICVF+ VYL+G
Sbjct: 146 GMHGLHVTAGLIWMAIMMIEVAKTGLGHRSITRLSCLSLFWHFLDIVWICVFTVVYLLGA 205
Query: 210 V 210
+
Sbjct: 206 L 206
>gi|94314710|ref|YP_587919.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus
metallidurans CH34]
gi|93358562|gb|ABF12650.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus
metallidurans CH34]
Length = 226
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75
+ D + V T LGFW+YLMSDCL+FAV F T+ VL N A GP ++FD+ +
Sbjct: 31 HGHDGHDDHVVQSRTTLGFWLYLMSDCLIFAVLFATFGVLVNNTAGGPGGRELFDLRFVL 90
Query: 76 VSTIVLLLSSLSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
T++LL SSL+ AM+ K ++ + W+++T G F+ MEI+EF LI A
Sbjct: 91 GETMLLLTSSLTFGVAMIKLEDGKANPNQVIRWIVLTFALGAAFVGMEIFEFMELIHEGA 150
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P RSA+LS+FF LVG HGLHV GL+W+ V+V QI GL +RRL CLS+FWHFLD
Sbjct: 151 GPGRSAYLSAFFMLVGTHGLHVTAGLLWIIVMVHQIQVFGLDGIVRRRLACLSLFWHFLD 210
Query: 195 LIWICVFSFVYL 206
L+WICVFS VYL
Sbjct: 211 LVWICVFSIVYL 222
>gi|238920119|ref|YP_002933634.1| cytochrome o ubiquinol oxidase, subunit III, [Edwardsiella ictaluri
93-146]
gi|238869688|gb|ACR69399.1| cytochrome o ubiquinol oxidase, subunit III, putative [Edwardsiella
ictaluri 93-146]
Length = 205
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F TYAVL A GP ++FD+ + V T +LL SS++ A
Sbjct: 28 GFWIYLMSDCILFAGLFATYAVLVNGTAGGPTGKEIFDLKFVLVETFLLLFSSITYGMA- 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + K + WLL+T FG+ F+ ME+YEF HLI+ P RS FLSSFFALVG H
Sbjct: 87 IGAMNKGSVGGVNVWLLLTFLFGLGFVSMEVYEFHHLITEGFGPDRSGFLSSFFALVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL W+ V++IQI K GL + N+ RL+CLS+FWHFLD+IWIC+F+ VYL+GV+
Sbjct: 147 GLHVTAGLTWIVVMMIQISKFGLTAANKTRLMCLSLFWHFLDVIWICLFTAVYLLGVM 204
>gi|33595768|ref|NP_883411.1| cytochrome ubiquinol oxidase subunit III [Bordetella parapertussis
12822]
gi|33565847|emb|CAE36393.1| cytochrome ubiquinol oxidase subunit III [Bordetella parapertussis]
Length = 173
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 126/173 (72%), Gaps = 2/173 (1%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS-LSCSFAMLASAT 97
MSDCL+FA F TY V+G+NY GP ++FD+ + V+T +LLL S ++ FAML
Sbjct: 1 MSDCLVFACLFATYGVVGRNYDGGPTGAELFDLPLVAVNTSLLLLLSSITYGFAMLEMRR 60
Query: 98 KRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVF 157
+R I T +WL VT G F+ +E+YEFAHLI A PQRSAFLS+FF LVG HGLHV
Sbjct: 61 QR-IGATQAWLAVTGLLGAGFLGLELYEFAHLIHQGAGPQRSAFLSAFFTLVGTHGLHVT 119
Query: 158 FGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
FG++WL L++Q+ + GLI N+R L+CLSMFWHFLDLIW+ VF+FVYLMGV+
Sbjct: 120 FGIVWLVTLMVQVSRHGLIPENRRCLMCLSMFWHFLDLIWVGVFTFVYLMGVL 172
>gi|296101551|ref|YP_003611697.1| cytochrome o ubiquinol oxidase subunit III [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056010|gb|ADF60748.1| cytochrome o ubiquinol oxidase subunit III [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 171
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMAAIA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV
Sbjct: 60 NNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGTHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ VL+ QI ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG +
Sbjct: 120 GLIWMAVLMFQISRRGLTSTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 171
>gi|193212539|ref|YP_001998492.1| cytochrome o ubiquinol oxidase subunit III [Chlorobaculum parvum
NCIB 8327]
gi|193086016|gb|ACF11292.1| cytochrome o ubiquinol oxidase, subunit III [Chlorobaculum parvum
NCIB 8327]
Length = 201
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 130/193 (67%), Gaps = 6/193 (3%)
Query: 16 YVKDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
Y+ + KE D D LGFWIYLMSD ++FA+ F T+ VLG+NYA GP P +FD+ +
Sbjct: 9 YLAEWKEP--DRLDMQMLGFWIYLMSDLVIFAILFATFIVLGQNYAGGPGPKQLFDLPYL 66
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFF-GMIFIIMEIYEFAHLISME 133
F T++LL SS++ F M+A ++ + V LV AF G F++MEI+EF LI
Sbjct: 67 FGETMLLLTSSVAYGFGMVAMQKEK--RRAVLTGLVVAFLLGAGFVVMEIHEFHGLIMAG 124
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
P S FLSSFFALVG HG HV FGL+W+ V++IQ++ KG +G + RL+ LS+FWHFL
Sbjct: 125 HGPANSGFLSSFFALVGTHGTHVSFGLLWMAVMMIQVMTKGFTAGVRSRLMRLSLFWHFL 184
Query: 194 DLIWICVFSFVYL 206
D++W+ VF+ VYL
Sbjct: 185 DIVWVGVFTVVYL 197
>gi|254522775|ref|ZP_05134830.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp.
SKA14]
gi|219720366|gb|EED38891.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp.
SKA14]
Length = 212
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TY VL GP D+F++ + T +LL SSL+
Sbjct: 33 TVFGFWVYLMSDCLIFASLFATYVVLSGGTDGGPGAKDLFELPFVAWETALLLTSSLTFG 92
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
M+A K++ + WL +T G F+ ME++EF HLI P RSAFLS+FFALV
Sbjct: 93 LGMIAMHRKQM-GQMYLWLAITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFFALV 151
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+WL V+ +Q+ K GL N+ R+ CLS+FWHFLDLIWI VFS VYL G
Sbjct: 152 GTHGLHVSAGLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYLNGA 211
Query: 210 V 210
+
Sbjct: 212 L 212
>gi|299769503|ref|YP_003731529.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter sp. DR1]
gi|298699591|gb|ADI90156.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter sp. DR1]
Length = 206
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 122/184 (66%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISGIFVSTIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ +F + + T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHVPEGTPSAYKLFHESLGYVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ ++WL +T FG FI ME+YEF HL+ P SAFLSSFF
Sbjct: 84 TFGFAVLASYKKN-VNQVITWLFITFLFGATFIGMELYEFHHLVEEGHGPTHSAFLSSFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI KGL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMLVLMYQIKTKGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
+GV+
Sbjct: 203 LGVL 206
>gi|17546579|ref|NP_519981.1| transmembrane cytochrome O ubiquinol oxidase (subunit III)
oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17428878|emb|CAD15562.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit III)
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 208
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 125/196 (63%), Gaps = 10/196 (5%)
Query: 17 VKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
+ HD T LGFW+YLMSDCL+FAV F T+ VL + A GP +F++
Sbjct: 13 APEAAHPHPHHDTGFNTTLGFWLYLMSDCLIFAVLFATFGVLSGSTAGGPGGRQLFELPF 72
Query: 74 IFVSTIVLLLSSLSCSFAML---ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ T++LL+SS + A+L A A R+ V WL VT G +F+ ME+YEF+HL+
Sbjct: 73 VLAETMLLLVSSYTFGIALLKQDADAAPRM----VRWLGVTFLLGALFVGMELYEFSHLL 128
Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190
A P SA+LS+FF LVG HGLHV GL+WL V++ Q+ GL +RRL CLS+FW
Sbjct: 129 HEGAGPGVSAYLSAFFTLVGTHGLHVTAGLLWLAVMMHQVRHFGLDGVVRRRLACLSLFW 188
Query: 191 HFLDLIWICVFSFVYL 206
HFLDL+WICVF+FVYL
Sbjct: 189 HFLDLVWICVFTFVYL 204
>gi|297620727|ref|YP_003708864.1| cytochrome o ubiquinol oxidase, subunit III [Waddlia chondrophila
WSU 86-1044]
gi|297376028|gb|ADI37858.1| cytochrome o ubiquinol oxidase, subunit III [Waddlia chondrophila
WSU 86-1044]
Length = 209
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 6/203 (2%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
+PN S V D + ++GFW+YLM+DC++FA F+T+AVL N GP+ D
Sbjct: 13 PNPNTS---VPDPHQDYFSMR--FIGFWVYLMTDCILFATLFITHAVLQANTFGGPSSKD 67
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+FD+ F T VLL+SS++C A+LA+ +RL ++++L T G+ F+ MEI EF
Sbjct: 68 LFDLRLAFGETFVLLISSVTCGLAVLAAVHQRL-RTSIAFLGATIALGLSFLTMEISEFH 126
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
H IS SAFLSSFFALVG HGLH+ FGLIW ++ Q+ GL RRL+ S
Sbjct: 127 HFISEGHSWTVSAFLSSFFALVGTHGLHITFGLIWASAMICQLFYYGLTIDTFRRLVLFS 186
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
+FWHFLDLIWI +F+FVYL+GV+
Sbjct: 187 LFWHFLDLIWIFIFTFVYLIGVI 209
>gi|194364920|ref|YP_002027530.1| cytochrome o ubiquinol oxidase subunit III [Stenotrophomonas
maltophilia R551-3]
gi|194347724|gb|ACF50847.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas
maltophilia R551-3]
Length = 212
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TY VL GP D+F++ + T +LL SSL+
Sbjct: 33 TVFGFWVYLMSDCLIFASLFATYVVLAGGTDGGPTAKDLFELPFVAWETALLLTSSLTFG 92
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
M+A K++ + WL +T G F+ ME++EF HLI P RSAFLS+FFALV
Sbjct: 93 LGMIAMHRKQM-GQMYLWLGITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFFALV 151
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+WL V+ +Q+ K GL N+ R+ CLS+FWHFLDLIWI VFS VYL G
Sbjct: 152 GTHGLHVSAGLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYLNGA 211
Query: 210 V 210
+
Sbjct: 212 L 212
>gi|190573373|ref|YP_001971218.1| putative quinol oxidase subunit 3 [Stenotrophomonas maltophilia
K279a]
gi|30351179|gb|AAP22950.1| cytochrome oxidase subunit III [Rhizobium arachis]
gi|190011295|emb|CAQ44908.1| putative quinol oxidase subunit 3 [Stenotrophomonas maltophilia
K279a]
Length = 212
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLMSDCL+FA F TY VL GP D+F++ + T +LL SSL+
Sbjct: 33 TVFGFWVYLMSDCLIFASLFATYVVLAGGTDGGPTAKDLFELPFVAWETALLLTSSLTFG 92
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
M+A K++ + WL +T G F+ ME++EF HLI P RSAFLS+FFALV
Sbjct: 93 LGMIAMHRKQM-GQMYLWLGITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFFALV 151
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+WL V+ +Q+ K GL N+ R+ CLS+FWHFLDLIWI VFS VYL G
Sbjct: 152 GTHGLHVSAGLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYLNGA 211
Query: 210 V 210
+
Sbjct: 212 L 212
>gi|296115137|ref|ZP_06833778.1| cytochrome o ubiquinol oxidase subunit III [Gluconacetobacter
hansenii ATCC 23769]
gi|295978238|gb|EFG84975.1| cytochrome o ubiquinol oxidase subunit III [Gluconacetobacter
hansenii ATCC 23769]
Length = 201
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 123/181 (67%), Gaps = 6/181 (3%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AVL + GP +VF++SG+ + T +LL SS++ F M
Sbjct: 24 GFWLYLMTDCIIFGTLFAVFAVLRTQFNGGPNGHEVFELSGVGIETAILLFSSITYGFGM 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A+ ++ V WL VT G+ F+ MEI EF+H+I+ P RSAFLSSFF LVG H
Sbjct: 84 IAAHANKISTMRV-WLGVTFLLGLGFLFMEIREFSHMIAEGNGPDRSAFLSSFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQR---RLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV GL+W+ VL+ Q K + N+R +L CLS+FWHFLD++WICVF+FVYLM V
Sbjct: 143 GLHVTCGLLWMAVLLFQTAGKTEL--NERMIGKLTCLSLFWHFLDIVWICVFTFVYLMSV 200
Query: 210 V 210
V
Sbjct: 201 V 201
>gi|294649994|ref|ZP_06727382.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter
haemolyticus ATCC 19194]
gi|292824087|gb|EFF82902.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter
haemolyticus ATCC 19194]
Length = 206
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 125/184 (67%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHIPPGTPSAYDLFHDSLGFVLAETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ + WL+VT FG FI MEIYEF HL+ P +SAFLS+FF
Sbjct: 84 TFGFAVLASYKKN-VNQVLLWLIVTFIFGATFIGMEIYEFHHLVHEGYGPTKSAFLSAFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI + GL N RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMAVLMYQIKQNGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
+GV+
Sbjct: 203 LGVL 206
>gi|71892024|ref|YP_277754.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796130|gb|AAZ40881.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 195
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+Y+MSDC++FA F Y+VL N A + D+F + +F+ T LLLSSL+
Sbjct: 16 TIFGFWLYIMSDCILFASLFAIYSVLCNNTADCSSGKDIFSLPFVFIETCCLLLSSLTHC 75
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
M+ K + W+ +T G+ FI MEIYEF HLI + P RSAFLSSFF LV
Sbjct: 76 KVMIY-VEKSCTKQINIWMGITFLLGLCFISMEIYEFYHLIKLGNNPCRSAFLSSFFTLV 134
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GLIW+ V++I I+ +GL N R+ CLS+FWHFLD+IWICVF+ VYL+GV
Sbjct: 135 GTHGLHVMAGLIWIAVMIIHIVYQGLTYTNYIRMQCLSLFWHFLDVIWICVFTEVYLLGV 194
Query: 210 V 210
+
Sbjct: 195 L 195
>gi|50085512|ref|YP_047022.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter sp. ADP1]
gi|49531488|emb|CAG69200.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter sp. ADP1]
Length = 206
Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 121/184 (65%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPTAHDLFSESLGFVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ + WL +T FG FI ME+YEF HL+ P SAFLS+FF
Sbjct: 84 TFGFAVLASYKKN-VNQVIMWLFITFVFGATFIGMELYEFHHLVHSGHGPGTSAFLSAFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI KGL RRL CLS+FWHFLD++WICVFS VYL
Sbjct: 143 TLVGTHGIHVTSGLVWMLVLIYQIKTKGLTLPTTRRLACLSLFWHFLDIVWICVFSVVYL 202
Query: 207 MGVV 210
MGV+
Sbjct: 203 MGVL 206
>gi|332143298|ref|YP_004429036.1| cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain
C) [Alteromonas macleodii str. 'Deep ecotype']
gi|327553320|gb|AEB00039.1| cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain
C) [Alteromonas macleodii str. 'Deep ecotype']
Length = 171
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DCL+FA FF TYAVL N A G + D+F+++ + V T LLLSS++ FAM+ A +
Sbjct: 1 MTDCLLFASFFATYAVLFMNTAGGVSGKDIFELNFVAVETAALLLSSITFGFAMIC-AHR 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ ++WL VT G FI ME+YEF HLI PQ+SAFL++FF+LVGLHGLHV
Sbjct: 60 QNKSGALAWLAVTWALGACFIGMEVYEFHHLIEHGNGPQQSAFLTAFFSLVGLHGLHVTA 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ ++ I++ ++GL RL CLS+FWHFLD++WICVF+ VYLMG +
Sbjct: 120 GLIWMTIMFIEVTRRGLGEQTVTRLSCLSLFWHFLDIVWICVFTVVYLMGAM 171
>gi|325275994|ref|ZP_08141819.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas sp.
TJI-51]
gi|324098875|gb|EGB96896.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas sp.
TJI-51]
Length = 171
Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA F TYAVL ++A GP+ D+F + + V T+ LLLSS++ FAML
Sbjct: 1 MTDCILFASLFATYAVLSGSFAGGPSGHDIFQLDFVAVETLFLLLSSITFGFAMLKMFDG 60
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL VT FG FI MEIYEF HLI PQRS FLS FFALVG HGLHV
Sbjct: 61 KKA-GVLGWLAVTFLFGAGFIAMEIYEFHHLIGEGFGPQRSGFLSGFFALVGTHGLHVTA 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ QI K G+ + R+ CLS+FWHFLD++WICVF+ VYL+GV+
Sbjct: 120 GLIWMAIMMYQINKHGITPTAKTRMSCLSLFWHFLDVVWICVFTVVYLLGVL 171
>gi|226952680|ref|ZP_03823144.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter sp. ATCC
27244]
gi|226836586|gb|EEH68969.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter sp. ATCC
27244]
Length = 206
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 125/184 (67%), Gaps = 4/184 (2%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV--STIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F S FV T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHIPPGTPSAYDLFHDSLGFVLAETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA+LAS K +++ + WL+VT FG FI MEIYEF HL+ P +SAFLS+FF
Sbjct: 84 TFGFAVLASYKKN-VNQVLLWLIVTFIFGATFIGMEIYEFHHLVHEGYGPTKSAFLSAFF 142
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG+HV GL+W+ VL+ QI + GL N RRL CLS+FWHFLD++WICVFS V+L
Sbjct: 143 TLVGTHGIHVTSGLVWMAVLMYQIKQNGLTLPNTRRLACLSLFWHFLDIVWICVFSVVHL 202
Query: 207 MGVV 210
+GV+
Sbjct: 203 LGVL 206
>gi|32490898|ref|NP_871152.1| hypothetical protein WGLp149 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166104|dbj|BAC24295.1| cyoC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 205
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
ES LGFW+YLMSDC++FA F TY VL N A GP+ ++F+I +F+ TI
Sbjct: 15 NNESNNHEKTKILGFWVYLMSDCILFATLFATYFVLKDNVANGPSGKEIFEIPLVFLETI 74
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
+LL SS++CS A + I KT WL +T G+IFI +EI EF LI P RS
Sbjct: 75 ILLSSSMTCSIASFSIKKNNKI-KTNIWLFITVILGIIFINIEISEFYSLICKNYGPDRS 133
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
AFLS FF +VG HG+HV G+IW+ V++IQI G N+ RL LS+FW+FL++IWI
Sbjct: 134 AFLSIFFTIVGTHGVHVISGIIWMIVIMIQIYFYGCDKINKIRLKLLSLFWYFLEIIWIF 193
Query: 200 VFSFVYLMGVV 210
VF+ +YL+G++
Sbjct: 194 VFNVIYLLGII 204
>gi|304414865|ref|ZP_07395783.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Regiella
insecticola LSR1]
gi|304283134|gb|EFL91548.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Regiella
insecticola LSR1]
Length = 210
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 125/178 (70%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWIYLMSDC++FA F YAVL A GP+ D+FD+ + + T +LLLSS++ AM
Sbjct: 34 GFWIYLMSDCILFAALFANYAVLVNGIADGPSGKDIFDLRFVLIETFLLLLSSITYGIAM 93
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L K ++ L +T G+ F+ MEI+EF LI+ P RSAFLSSFFALV H
Sbjct: 94 LG-INKGCKNQVNISLALTFILGLGFVAMEIFEFHELIAEGYGPDRSAFLSSFFALVATH 152
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+HV GLIW+ +++IQ++++GL + NQ RL+CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 153 GIHVSAGLIWIIIMIIQVMRRGLNTTNQTRLMCLSLFWHFLDVVWICVFTIVYLLGAM 210
>gi|300702889|ref|YP_003744490.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia solanacearum
CFBP2957]
gi|299070551|emb|CBJ41846.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum
CFBP2957]
Length = 211
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLILFASLFATFCVLRSATAGGPNGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 95 IGLQSGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G +
Sbjct: 154 GLHVASGLLWIAVLMWQISRKGLTATNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211
>gi|83747512|ref|ZP_00944550.1| Cytochrome O ubiquinol oxidase subunit III [Ralstonia solanacearum
UW551]
gi|83725826|gb|EAP72966.1| Cytochrome O ubiquinol oxidase subunit III [Ralstonia solanacearum
UW551]
Length = 211
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLILFASLFATFCVLRSATAGGPNGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 95 IGLQSGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G +
Sbjct: 154 GLHVASGLLWIAVLMWQISRKGLTATNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211
>gi|328470436|gb|EGF41347.1| cytochrome o ubiquinol oxidase subunit III [Vibrio parahaemolyticus
10329]
Length = 171
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ F ++A +
Sbjct: 1 MSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITFGFGIIA-MKR 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF LVG HGLHV F
Sbjct: 60 NDVAGLKRWMLVTFALGLGFICMEVYEFHHLIKEGYGPQTSAFLSAFFTLVGTHGLHVTF 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 120 GLIWLVVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMGVM 171
>gi|300690264|ref|YP_003751259.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum
PSI07]
gi|299077324|emb|CBJ49950.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum
PSI07]
Length = 211
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLILFASLFATFCVLRSATAGGPDGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 95 IGLQAGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G +
Sbjct: 154 GLHVASGLLWIAVLMWQISRKGLTATNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211
>gi|299065535|emb|CBJ36706.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum
CMR15]
Length = 211
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 95 VGLQAGR-KDQVLLWLGITFLLGAAFVGMEINEFHHLIAEGAGPNRSAFLSSFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G
Sbjct: 154 GLHVASGLLWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLG 209
>gi|254524322|ref|ZP_05136377.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp.
SKA14]
gi|219721913|gb|EED40438.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp.
SKA14]
Length = 211
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
G W+YLMSD ++F F +YAVL YA GP D+F + + T +LL+SS++ A+
Sbjct: 35 GMWVYLMSDLVLFGSLFASYAVLSTAYAGGPTGKDLFSLPFVMAETFLLLVSSITYGQAV 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + WL VT G FI MEIYEF+HLI A P SA+LS+FFALV H
Sbjct: 95 LA-MHRHDASAVLRWLGVTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSAFFALVATH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV GLIW+ V++ Q+ ++GL N R+ CLS+FWHFLDL+WICVF+FVYL+G
Sbjct: 154 GLHVASGLIWMAVVMHQVYRRGLTPTNITRVSCLSLFWHFLDLVWICVFTFVYLIG 209
>gi|212638123|ref|YP_002314643.1| cytochrome aa3 quinol oxidase subunit III [Anoxybacillus
flavithermus WK1]
gi|212559603|gb|ACJ32658.1| Cytochrome aa3 quinol oxidase subunit III [Anoxybacillus
flavithermus WK1]
Length = 201
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F Y VLG YA GP P D+F ++ + + T++LL SS +C A
Sbjct: 23 LGFWIFLGAEIVLFATLFAVYGVLGHRYAGGPTPSDIFKLNDVLIETLLLLTSSFTCGLA 82
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ +R + K + WL++T G F+ MEI EF H + A Q SAFLSSFF L+G
Sbjct: 83 VFF-MRQRDMKKLLVWLIITLLLGAGFLFMEIREFIHYVHEGATMQTSAFLSSFFVLLGT 141
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV FG+IW +L+IQ+L++GL R++ +S++WHFLD++WI +F+FVYL G+V
Sbjct: 142 HGAHVTFGIIWAVMLIIQLLQRGLTPMTARKMFIISLYWHFLDVVWIFIFTFVYLKGMV 200
>gi|17547634|ref|NP_521036.1| transmembrane cytochrome O ubiquinol oxidase (subunit III)
oxidoreductase [Ralstonia solanacearum GMI1000]
gi|17429938|emb|CAD16622.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit III)
oxidoreductase protein [Ralstonia solanacearum GMI1000]
Length = 211
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 95 VGLQAGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G
Sbjct: 154 GLHVASGLLWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLG 209
>gi|225626591|ref|ZP_03784630.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti str.
Cudo]
gi|225618248|gb|EEH15291.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti str.
Cudo]
Length = 171
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F+ F TYAVL +A GP ++FD+ + V T++LL+SSL+ A L S K
Sbjct: 1 MSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFVLVETMLLLVSSLTYGLATL-SMYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ WL VT G F+ MEIYEF HLI A P RS+FLS+FF LVG HGLH+
Sbjct: 60 NNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGAGPDRSSFLSAFFTLVGTHGLHITS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ VL +L+ GL N+ R++CLS+FWHFLD+IWI VF+ VYL+GV+
Sbjct: 120 GLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLDIIWIGVFTLVYLLGVL 171
>gi|194367565|ref|YP_002030175.1| cytochrome o ubiquinol oxidase subunit III [Stenotrophomonas
maltophilia R551-3]
gi|194350369|gb|ACF53492.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas
maltophilia R551-3]
Length = 211
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
G W+YLMSD ++F F +YAVL YA GP D+F + + T +LL+SS++ A+
Sbjct: 35 GMWVYLMSDLVLFGSLFASYAVLSTAYAGGPTGKDLFSLPFVMAETFLLLVSSITYGQAV 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + WL VT G FI MEIYEF+HLI A P SA+LS+FFALV H
Sbjct: 95 LA-MHRHDTSAVLRWLGVTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSAFFALVATH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV GLIW+ V++ Q+ +GL N R+ CLS+FWHFLDL+WICVF+FVYL+G
Sbjct: 154 GLHVASGLIWMAVVMHQVYSRGLTPTNITRVSCLSLFWHFLDLVWICVFTFVYLIG 209
>gi|332992079|gb|AEF02134.1| cytochrome o ubiquinol oxidase subunit III [Alteromonas sp. SN2]
Length = 171
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DCL+FA F TYAVL N A G + D+F+++ + V T LL+SS++ FAM+ A K
Sbjct: 1 MTDCLLFASFLATYAVLFMNTAGGVSGKDIFELNFVAVETAALLVSSITFGFAMIC-AHK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ ++WL +T G FI ME+YEF HLI PQ SAFL++FF+LVGLHGLHV
Sbjct: 60 QNKSGALAWLAITWVLGATFIGMEVYEFHHLIVHGNGPQESAFLTAFFSLVGLHGLHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLIW+ +L I++ ++GL RL CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 120 GLIWMTILFIEVSRRGLPEKTVTRLSCLSLFWHFLDIVWICVFTVVYLMG 169
>gi|319778051|ref|YP_004134481.1| cytochrome c oxidase subunit iii [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171770|gb|ADV15307.1| cytochrome c oxidase subunit III [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 228
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 1/177 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWI+L+SD ++F+ FF YAVL K A GP D+F+ + + V T +LL SS + A
Sbjct: 51 GFWIFLLSDIIIFSAFFAAYAVLAKATAGGPTGKDLFEPTRVAVQTGLLLTSSFTGGLAT 110
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA+ +R + T +WLLVT G F+ +E+ EFA +I +A P RSAFLS+FFALVG H
Sbjct: 111 LAT-HRRSMAATQAWLLVTGLLGAAFLFLEVQEFAAMIGEQAGPSRSAFLSAFFALVGCH 169
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HV GL+WL ++ Q+ KG S RRL C +FWH LD+IW+ +F+ VYL+G
Sbjct: 170 GTHVGLGLLWLGTMMAQLWVKGFRSDILRRLHCFGLFWHALDIIWVAIFTLVYLLGA 226
>gi|190576213|ref|YP_001974058.1| putative cytochrome o ubiquinol oxidase subunit III
[Stenotrophomonas maltophilia K279a]
gi|190014135|emb|CAQ47774.1| putative cytochrome o ubiquinol oxidase subunit III
[Stenotrophomonas maltophilia K279a]
Length = 211
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
G W+YLMSD ++F F +YAVL YA GP ++F + + T +LL+SS++ A+
Sbjct: 35 GMWVYLMSDLVLFGSLFASYAVLSTAYAGGPTGKELFSLPFVMAETFLLLVSSITYGQAV 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + WL VT G FI MEIYEF+HLI A P SA+LS+FFALV H
Sbjct: 95 LA-MHRHDTSAVLRWLGVTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSAFFALVATH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV GLIW+ V++ Q+ ++GL N R+ CLS+FWHFLDL+WICVF+FVYL+G
Sbjct: 154 GLHVASGLIWMAVVMHQVYRRGLTPTNITRVSCLSLFWHFLDLVWICVFTFVYLIG 209
>gi|90579541|ref|ZP_01235350.1| Cytochrome c oxidase, subunit III [Vibrio angustum S14]
gi|90439115|gb|EAS64297.1| Cytochrome c oxidase, subunit III [Vibrio angustum S14]
Length = 214
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIY++SDCL+F F +AV ++A P ++F+++ + T +LLLSS +
Sbjct: 35 TIFGFWIYILSDCLLFGTLFAVFAVFSNSFAGQIEPTELFNLTFVAGETALLLLSSFTFG 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AML A K + + WL +T G+ F++ME+YEF H + A SA+ SSF+ALV
Sbjct: 95 MAML-KANKEDMKGMLKWLGITFALGLSFLVMELYEFWHFSNEGATFHSSAYWSSFYALV 153
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HGLHVF GLIW+ VL + + G N+ RL CLS+FWHFLD+IWICVFS VYLMGV
Sbjct: 154 ATHGLHVFAGLIWMIVLFVHFKRDGFSEDNKTRLACLSLFWHFLDVIWICVFSVVYLMGV 213
Query: 210 V 210
+
Sbjct: 214 L 214
>gi|258510523|ref|YP_003183957.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477249|gb|ACV57568.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 202
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW++L +D L+F F TY VL + GP PI +FDI G + T LL SS + A
Sbjct: 24 GFWVFLATDMLLFGCLFATYLVLRTHTDGGPTPIQIFDIPGFTLETFFLLTSSFTGGIAT 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A + R +TVSW+LVT FG+ FI++E EFAH +++ A RSAFLS+FF LVG H
Sbjct: 84 WAMRSGRQ-KQTVSWMLVTMMFGLAFILLEATEFAHDVTVGATIGRSAFLSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G HV GL+W+F+ ++Q+LK G+ R++ ++++WHFLD++W+ +F+ VYL GVV
Sbjct: 143 GSHVSIGLVWMFLTMLQVLKHGITPQTARKVFVVNLYWHFLDVVWVFIFTVVYLSGVV 200
>gi|260459334|ref|ZP_05807589.1| cytochrome c oxidase subunit III [Mesorhizobium opportunistum
WSM2075]
gi|259034888|gb|EEW36144.1| cytochrome c oxidase subunit III [Mesorhizobium opportunistum
WSM2075]
Length = 228
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 1/177 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWI+L+SD ++F+ FF YAVL K A GP ++F+ + + V T +LL SS + A
Sbjct: 51 GFWIFLLSDIIIFSAFFAAYAVLAKATAGGPTGKELFEPTRVAVQTGLLLTSSFTGGLAT 110
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA+ +R + T +WLLVT G F+ +E+ EFA +I +A P RSAFLS+FFALVG H
Sbjct: 111 LAT-DRRSMAATQAWLLVTGLLGAAFLFLEVQEFAAMIGEQAGPSRSAFLSAFFALVGCH 169
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HV GL+WL ++ Q+ KG S RRL C +FWH LD+IW+ +F+ VYL+G
Sbjct: 170 GTHVGLGLLWLGTMMAQLWVKGFRSDILRRLHCFGLFWHALDIIWVAIFTLVYLLGA 226
>gi|254472596|ref|ZP_05085995.1| Cytochrome o ubiquinol oxidase subunit 3 [Pseudovibrio sp. JE062]
gi|211958060|gb|EEA93261.1| Cytochrome o ubiquinol oxidase subunit 3 [Pseudovibrio sp. JE062]
Length = 202
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 121/179 (67%), Gaps = 5/179 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFW+YLM+D ++F++ F TY V+ +N A GP PI+VFDI +F T+ LL SS++ FA
Sbjct: 24 LGFWLYLMTDAIIFSLLFATYVVMFQNTATGPLPIEVFDIKHVFGETMFLLFSSVTFGFA 83
Query: 92 MLASATKRLIHKT--VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
LAS + HK+ V WL+VT G+ FI +E+ EF +I A PQ S FL++FF LV
Sbjct: 84 SLASVRE---HKSQAVFWLIVTIVLGLGFISLEVIEFIGMIQSGAGPQTSGFLTAFFTLV 140
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G HG HV G+I + V++ QIL KGL S + RL L MFWHFLD++WI +FS VY+ G
Sbjct: 141 GTHGAHVSLGMIGILVMIFQILIKGLTSPVKSRLHRLGMFWHFLDIVWIGIFSIVYMPG 199
>gi|330957414|gb|EGH57674.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 171
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI MEIYEF HLI P RS FLS+FFALVGLHG+HV
Sbjct: 60 GKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIEEGFGPSRSGFLSAFFALVGLHGVHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|58040343|ref|YP_192307.1| cytochrome o ubiquinol oxidase subunit III [Gluconobacter oxydans
621H]
gi|58002757|gb|AAW61651.1| Cytochrome o ubiquinol oxidase subunit III [Gluconobacter oxydans
621H]
Length = 205
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 8/192 (4%)
Query: 26 DHDGTY------LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
DH G + GFW+YLM+DC++F F +AVL +A GP+ ++FD++ + + T
Sbjct: 15 DHHGEHHESPNVFGFWLYLMTDCVLFGSIFAAFAVLRNQFAGGPSGKELFDLTNVGIETA 74
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
+LL SS++ FA L + K + WL VT G+ F+ +E+ EF+ +I+ P RS
Sbjct: 75 ILLFSSITYGFASLNALAKN-KKMVLLWLAVTFVLGVSFVGLELNEFSSMIAEGNGPDRS 133
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN-QRRLICLSMFWHFLDLIWI 198
AFLS+FF LVG HGLHV GLIW+ VL++Q++ +S +L CLS+FWHFLD++WI
Sbjct: 134 AFLSAFFTLVGTHGLHVTCGLIWMVVLMVQMMGPQDLSERMMNKLACLSLFWHFLDIVWI 193
Query: 199 CVFSFVYLMGVV 210
CVFSFVYL GV+
Sbjct: 194 CVFSFVYLAGVM 205
>gi|330873014|gb|EGH07163.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. morsprunorum str. M302280PT]
gi|330963122|gb|EGH63382.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 171
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI MEIYEF HLI P RS FLS+FFALVGLHG+HV
Sbjct: 60 GKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALVGLHGVHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|329114806|ref|ZP_08243563.1| Ubiquinol oxidase subunit III [Acetobacter pomorum DM001]
gi|326695937|gb|EGE47621.1| Ubiquinol oxidase subunit III [Acetobacter pomorum DM001]
Length = 201
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 120/179 (67%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AVL + GP ++F+ G+ + T +LL+SS++ F M
Sbjct: 24 GFWVYLMTDCIIFGTLFAVFAVLRNQFNGGPTGHELFEFGGLGLETALLLVSSITYGFGM 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A A K + K + WL VT G+ F+ +E+ EFAH+I+ A P RSAFLS+FF LV H
Sbjct: 84 IA-AHKSQVSKVILWLGVTFLLGLGFVGLELREFAHMIAEGAGPDRSAFLSAFFTLVSTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGN-QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ L++Q++ I +L CLS+FWHFLD++WICVF++VYL ++
Sbjct: 143 GLHVTCGLIWIVTLIVQLMGTTEIPERMMNKLTCLSLFWHFLDIVWICVFTYVYLASMI 201
>gi|330969179|gb|EGH69245.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. aceris str. M302273PT]
Length = 171
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI MEIYEF HLI P RS FLS+FFALVGLHG HV
Sbjct: 60 GNKSQVLGWLALTFLCGAAFIGMEIYEFHHLIEEGYGPSRSGFLSAFFALVGLHGAHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKKGLTNTNKARLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|330870267|gb|EGH04976.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330874427|gb|EGH08576.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330890460|gb|EGH23121.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. mori str. 301020]
gi|330988097|gb|EGH86200.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331009079|gb|EGH89135.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. tabaci ATCC 11528]
Length = 171
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI MEIYEF HLI P RS FLS+FFALVGLHG HV
Sbjct: 60 GKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALVGLHGAHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|20378345|gb|AAM20916.1|AF439739_3 cytochrome bo subunit C [Vitreoscilla sp. C1]
Length = 210
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 4/182 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVF-DISG-IFVSTIVLLLSSLSCS 89
LGFWIY+M+D ++F F+ + VL ++ A G ++F D G +FV TIVLL SS +
Sbjct: 29 LGFWIYIMTDLILFCTLFIGFQVLREHSAGGATEYEIFKDTLGFVFVETIVLLASSFTFG 88
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A A A K + K WL+ T G IFI ME+YEF+HLI PQ SAFL+S+F+LV
Sbjct: 89 MAHFAQAQKN-VAKLQFWLIATFVLGAIFIGMEVYEFSHLIHAGHTPQSSAFLTSYFSLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLIS-GNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G HGLHV GLIWL VL++Q+ K GL + RRL+ LS+FWHFLD++W+CV++ VYL+G
Sbjct: 148 GTHGLHVTSGLIWLAVLIVQVGKFGLDNPAVNRRLMMLSIFWHFLDIVWVCVYTEVYLLG 207
Query: 209 VV 210
+
Sbjct: 208 AI 209
>gi|330895788|gb|EGH28077.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. japonica str. M301072PT]
gi|330939015|gb|EGH42487.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 171
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI ME+YEF HLI P RS FLS+FFALVGLHG+HV
Sbjct: 60 GNKSQVLGWLALTFLCGAAFIGMEVYEFHHLIEEGFGPSRSGFLSAFFALVGLHGVHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|89073978|ref|ZP_01160484.1| ubiquinol oxidase subunit III [Photobacterium sp. SKA34]
gi|89050306|gb|EAR55810.1| ubiquinol oxidase subunit III [Photobacterium sp. SKA34]
Length = 214
Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 116/181 (64%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFWIY++SDCL+F F +AV ++A P ++F+++ + T +LLLSS +
Sbjct: 35 TIFGFWIYILSDCLLFGTLFAVFAVFSNSFAGQIEPTELFNLTFVAGETALLLLSSFTFG 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
AML A + + WL +T G+ F++ME+YEF H + A SA+ SSF+ALV
Sbjct: 95 MAML-KANNENMKGMLKWLGITFALGLSFLVMELYEFWHFSNEGATFHSSAYWSSFYALV 153
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HGLHVF GLIW+ VL + + G N+ RL CLS+FWHFLD+IWICVFS VYLMGV
Sbjct: 154 ATHGLHVFAGLIWMTVLFVHFKRDGFSEDNKTRLACLSLFWHFLDVIWICVFSVVYLMGV 213
Query: 210 V 210
+
Sbjct: 214 L 214
>gi|303246929|ref|ZP_07333205.1| cytochrome o ubiquinol oxidase, subunit III [Desulfovibrio
fructosovorans JJ]
gi|302491636|gb|EFL51519.1| cytochrome o ubiquinol oxidase, subunit III [Desulfovibrio
fructosovorans JJ]
Length = 204
Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 6/189 (3%)
Query: 26 DHDGT---YLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82
DHD LGFW+YLM+D ++F+ F TY VL N A GP+ ++F + +FV T++LL
Sbjct: 17 DHDAPGLHALGFWLYLMTDLIVFSALFATYVVLAPNTAGGPSARELFHLPEVFVETMLLL 76
Query: 83 LSSLSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
SS+ +A LA A K+ + ++ L +T G+ FI+ME+ EF LI A PQRS F
Sbjct: 77 TSSVVFGYASLALGAGKKGL--GLAGLALTFLLGLGFIVMELGEFHRLILAGAGPQRSGF 134
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
LS+FF LVG HG HV GL+WL V++ QIL KGL + RL L MFWHFLD+IWI +F
Sbjct: 135 LSAFFTLVGTHGAHVTVGLLWLAVMMGQILTKGLTVPVRSRLARLGMFWHFLDIIWIGLF 194
Query: 202 SFVYLMGVV 210
+ VYLMGV+
Sbjct: 195 TVVYLMGVM 203
>gi|330950893|gb|EGH51153.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
Cit 7]
Length = 171
Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI MEIYEF HLI P RS FLS+FFALVGLHG HV
Sbjct: 60 GNKSQVLGWLALTFLCGAAFIGMEIYEFHHLIEEGYGPSRSGFLSAFFALVGLHGAHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ K+GL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKRGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|226314760|ref|YP_002774656.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599]
gi|226097710|dbj|BAH46152.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599]
Length = 198
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 34 FWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAML 93
FWIYLM+D ++FA F TY VL + GP P D+F +SGI+ ST +LL SS + A+L
Sbjct: 23 FWIYLMTDVILFATLFATYIVLQGSTDGGPGPKDLFQMSGIYASTFILLTSSFTSGLAIL 82
Query: 94 A-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A + RL ++WL VT F G F+ +EI EF H++S A SAFL++F+ LVG H
Sbjct: 83 AMNKGNRL--ALMNWLGVTVFLGASFLFLEINEFIHMVSEGATIGTSAFLTAFYTLVGTH 140
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV G+ W+ ++++QI K G+ +R++ +S+FWHFLD++WI VF+ VY+MGV
Sbjct: 141 GLHVTLGMGWMIIVIMQIAKHGITPVTKRKVNIISLFWHFLDVVWIFVFTIVYVMGV 197
>gi|258541196|ref|YP_003186629.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-01]
gi|21321321|dbj|BAB97175.1| ubiquinol oxidase subunit III [Acetobacter pasteurianus]
gi|256632274|dbj|BAH98249.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-01]
gi|256635331|dbj|BAI01300.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-03]
gi|256638386|dbj|BAI04348.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-07]
gi|256641440|dbj|BAI07395.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-22]
gi|256644495|dbj|BAI10443.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-26]
gi|256647550|dbj|BAI13491.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-32]
gi|256650603|dbj|BAI16537.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653594|dbj|BAI19521.1| cytochrome o ubiquinol oxidase subunit III [Acetobacter
pasteurianus IFO 3283-12]
Length = 201
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 119/179 (66%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AVL + GP ++F+ G+ + T +LL+SS++ F M
Sbjct: 24 GFWVYLMTDCIIFGTLFAVFAVLRNQFNGGPTGHELFEFGGLGLETALLLVSSITYGFGM 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A A K + K + WL VT G+ F+ +E+ EFAH+I+ A P RSAFLS+FF LV H
Sbjct: 84 IA-AHKSQVSKVILWLGVTFLLGLGFVGLELREFAHMIAEGAGPDRSAFLSAFFTLVSTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGN-QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ L+ Q++ I +L CLS+FWHFLD++WICVF++VYL ++
Sbjct: 143 GLHVTCGLIWIVTLIAQLMGTTEIPERMMNKLTCLSLFWHFLDIVWICVFTYVYLASMI 201
>gi|118591210|ref|ZP_01548609.1| Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein
[Stappia aggregata IAM 12614]
gi|118436286|gb|EAV42928.1| Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein
[Stappia aggregata IAM 12614]
Length = 197
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 128/196 (65%), Gaps = 10/196 (5%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
++++ H + GFWIYLM+D ++FA+ F +YAVL +N AAGP D+FD+S + T
Sbjct: 8 EEEQKHALHSREF-GFWIYLMTDAVIFALLFASYAVLAENSAAGPTSNDLFDLSRTAIET 66
Query: 79 IVLLLSSLSCSFAMLASATKRLIH----KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
+LL+SSL+ A +A L+H + V WL VT G+ F+ ME+ EF +I A
Sbjct: 67 GLLLVSSLTFGMASIA-----LMHDQKGRVVQWLFVTLLLGLAFLAMEMGEFGGMIEKGA 121
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
P+ S FLS+FF LVG HGLHV FG + + V++ Q+L KGL + + RL+ L +FWHFLD
Sbjct: 122 GPEVSGFLSAFFTLVGTHGLHVAFGSLGIVVMIGQVLVKGLTAPVRSRLMRLGLFWHFLD 181
Query: 195 LIWICVFSFVYLMGVV 210
++WI +FS VYL GV+
Sbjct: 182 IVWIGIFSAVYLPGVL 197
>gi|315616630|gb|EFU97247.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 3431]
Length = 163
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
Query: 49 FVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWL 108
F TYAVL A GP D+F++ + V T +LL SS++ A +A K + +SWL
Sbjct: 2 FATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWL 60
Query: 109 LVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVI 168
+T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV GLIW+ VL++
Sbjct: 61 ALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMV 120
Query: 169 QILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
QI ++GL S N+ R++CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 121 QIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMG 160
>gi|331092960|ref|ZP_04588387.2| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331022781|gb|EGI02838.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 171
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
M+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ FAMLA K
Sbjct: 1 MTDCVLFASFFAVYAVMVNSVAGGPSGHDIFLLPFVAVETAFLLVSSITYGFAMLA-LYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ + WL +T G FI ME+YEF HLI P RS FLS+FFALVGLHG+HV
Sbjct: 60 GNKSQVLGWLALTFLCGASFIGMEVYEFHHLIHEGFGPSRSGFLSAFFALVGLHGVHVTS 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG +
Sbjct: 120 GLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGAL 171
>gi|70732059|ref|YP_261815.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas fluorescens
Pf-5]
gi|68346358|gb|AAY93964.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas
fluorescens Pf-5]
Length = 204
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++FA F +YAVL + A GP+ +DVF++ + T++LLLSS++ FAM
Sbjct: 28 GFWVYLMTDCILFATLFASYAVLRDSVAGGPSTMDVFELPYVLAETLLLLLSSITYGFAM 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + + + WL +TA G+ F+ MEI EF LIS P RS FLS+FF LVG H
Sbjct: 88 LAMNRDQRT-QVLRWLGLTALLGLGFVAMEINEFHQLISEGHGPDRSGFLSAFFTLVGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV GL+W+ VL+ Q+ +GL + RL CLS+FWHFLD+IWICVF+ VYL+GV
Sbjct: 147 GLHVACGLVWMAVLMWQVHSRGLGAIQATRLSCLSLFWHFLDVIWICVFTVVYLLGV 203
>gi|126642213|ref|YP_001085197.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter baumannii
ATCC 17978]
gi|213158553|ref|YP_002319851.1| cytochrome O ubiquinol oxidase, subunit III [Acinetobacter
baumannii AB0057]
gi|213057713|gb|ACJ42615.1| cytochrome O ubiquinol oxidase, subunit III [Acinetobacter
baumannii AB0057]
Length = 174
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISGIFVSTIVLLLSSLSCSFAMLAS 95
MSD ++F F+ +AVL + G P+ D+F + + T LL+SS++ FA+LAS
Sbjct: 1 MSDLILFGSLFIAFAVLSSHVPPGTPSAYDLFHESLGYVLTETFALLISSVTFGFAVLAS 60
Query: 96 ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLH 155
K +++ ++WL +T FG FI ME+YEF HL+ P SAFLSSFF LVG HG+H
Sbjct: 61 YKKN-VNQVITWLFITFLFGATFIGMELYEFHHLVEEGHGPTHSAFLSSFFTLVGTHGIH 119
Query: 156 VFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
V GL+W+ VL+ QI KGL N RRL CLS+FWHFLD++WICVFS VYL+GV+
Sbjct: 120 VTSGLVWMLVLMYQIKTKGLTLPNTRRLACLSLFWHFLDIVWICVFSVVYLLGVL 174
>gi|241664395|ref|YP_002982755.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii
12D]
gi|240866422|gb|ACS64083.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii
12D]
Length = 213
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 37 GFWVYLMSDLIIFASLFATFCVLRGATAGGPTGKELFDLSYVAIETGILLVSSITYGMVM 96
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
++ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 97 ISLQNGRK-DQVMLWLGITLLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFLLVGTH 155
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV G++W+ VL+ QI KGL RL CLS+FWHFLD++WI VF+ VYL+G
Sbjct: 156 GLHVASGMLWIIVLMWQIGAKGLTPTQSTRLSCLSLFWHFLDVVWIGVFTVVYLLG 211
>gi|187930228|ref|YP_001900715.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii
12J]
gi|187727118|gb|ACD28283.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii
12J]
Length = 209
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 33 GFWVYLMSDLIIFASLFATFCVLRGATAGGPTGKELFDLSYVAIETGILLVSSITYGMVM 92
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
++ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 93 ISLQNGRK-DQVMLWLGITLLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFLLVGTH 151
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV G++W+ VL+ QI KGL RL CLS+FWHFLD++WI VF+ VYL+G
Sbjct: 152 GLHVASGMLWIIVLMWQIGAKGLTPTQSTRLSCLSLFWHFLDVVWIGVFTVVYLLG 207
>gi|309782936|ref|ZP_07677656.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia sp.
5_7_47FAA]
gi|308918360|gb|EFP64037.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia sp.
5_7_47FAA]
Length = 213
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 37 GFWVYLMSDLIIFASLFATFCVLRGATAGGPTGKELFDLSYVAIETGILLVSSITYGMVM 96
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
++ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 97 ISLQNGRK-DQVMLWLGITLVLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFLLVGTH 155
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
GLHV G++W+ VL+ QI KGL RL CLS+FWHFLD++WI VF+ VYL+G
Sbjct: 156 GLHVASGMLWIIVLMWQIGAKGLTPTQSTRLSCLSLFWHFLDVVWIGVFTVVYLLG 211
>gi|330502491|ref|YP_004379360.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas mendocina
NK-01]
gi|328916777|gb|AEB57608.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas mendocina
NK-01]
Length = 208
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD--ISGIFVSTIVLLLSSLSCSF 90
GFW+YLM+D L+FA F T+AVL ++A GP ++ + + V T LL SS++
Sbjct: 30 GFWVYLMTDLLIFATVFATFAVLSNSFAGGPTAKEMLGGGLHLVLVETFALLFSSITYGM 89
Query: 91 AMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVG 150
AMLA+ + + WL +T FG FI +E+YEF HLI A PQ SA+ S+FF LVG
Sbjct: 90 AMLATY-RGDKGAVLRWLGITFLFGAAFISIELYEFRHLIHEGAGPQVSAYWSAFFTLVG 148
Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV GL+W+ VL+ Q+ +GL N+ R+ LS+FWHFLD++WICVF+ VYLMGV+
Sbjct: 149 THGLHVSAGLLWMLVLMFQVGSRGLTDTNKTRVGLLSLFWHFLDVVWICVFTVVYLMGVL 208
>gi|207744472|ref|YP_002260864.1| transmembrane cytochrome o ubiquinol oxidase (subunit III) protein
[Ralstonia solanacearum IPO1609]
gi|206595878|emb|CAQ62805.1| transmembrane cytochrome o ubiquinol oxidase (subunit III) protein
[Ralstonia solanacearum IPO1609]
Length = 211
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 116/176 (65%), Gaps = 1/176 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLILFASLFATFCVLRSATAGGPNGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + R + + WL +T G F+ MEI EF HLI+ A P RSAF SSFF LVG H
Sbjct: 95 IGLQSGRK-DQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFPSSFFTLVGPH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G+HV GL+W+ VL+ QI +KGL + N RL CLS+ WHFL ++WI VF+ VYL+G
Sbjct: 154 GVHVAIGLLWIAVLMWQISRKGLTATNSTRLACLSLLWHFLHVVWIGVFTVVYLLG 209
>gi|284006412|emb|CBA71648.1| cytochrome O ubiquinol oxidase subunit III [Arsenophonus nasoniae]
Length = 172
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSD ++FA F TY VL A GP D+F+++ + + T +LL SS++ FAMLA K
Sbjct: 1 MSDLILFACLFATYVVLVNGTAGGPTGKDIFNLNFVLIETFLLLFSSITYGFAMLA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFF 158
+ I+ WLL+T G+ F+IMEIYEF LI+ P RSAFLS+FF LV HG+HV F
Sbjct: 60 QKINLVKLWLLITFLLGLGFVIMEIYEFHELIAEGYGPDRSAFLSAFFTLVSTHGIHVSF 119
Query: 159 GLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GL W+ +++I I + GL + NQ RL CLS+FWHFLD++WICVF+ VYL+G +
Sbjct: 120 GLAWIIIMIIHISRHGLTAVNQTRLSCLSLFWHFLDVVWICVFTVVYLLGAL 171
>gi|296444725|ref|ZP_06886688.1| cytochrome c oxidase subunit III [Methylosinus trichosporium OB3b]
gi|296257673|gb|EFH04737.1| cytochrome c oxidase subunit III [Methylosinus trichosporium OB3b]
Length = 219
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 118/176 (67%), Gaps = 2/176 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWI+L+SD +MF+ FF +AVL GPA D+FD + + + T VLLLSS +C +
Sbjct: 43 GFWIFLLSDIVMFSAFFAAHAVLQNATDGGPAGRDLFDPTRVAIQTGVLLLSSFTCGVSA 102
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A+ + + T + LL T G +F+++E +EFA +I+ A PQRSAFLSSFFALVGLH
Sbjct: 103 VATNARSHV-WTQAALLATGLLGAVFLLLEAHEFAGMIASGAGPQRSAFLSSFFALVGLH 161
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G HV GL+WL ++ Q+ KG RLIC +++WH LD+IW+ +F+ VYL+G
Sbjct: 162 GAHVGVGLLWLGTMMAQLFVKGFTP-ILYRLICFNLYWHVLDIIWVAIFTVVYLIG 216
>gi|226310781|ref|YP_002770675.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599]
gi|226093729|dbj|BAH42171.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599]
Length = 202
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI++++DC++F F TYAV+ ++A GP ++F + G+ ST +LL SS + A
Sbjct: 25 LGFWIFVVTDCVLFGTLFATYAVMMNSFAGGPTGQELFQLPGVIASTFILLTSSFTSGLA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+LA K + + + WL VT G+ F+++E+ EF HL+S A S + S+F+ LVG
Sbjct: 85 VLA-MNKGNVKQLIGWLAVTGLLGLSFVVLEVTEFMHLMSEGATMATSGYWSAFYTLVGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG+HV GL W+ L+IQ+ ++G+ + +R++ S++WHFLD++WI +F+ VYLMGV+
Sbjct: 144 HGVHVTVGLFWMTALMIQLKRRGISAVTRRKITNFSLYWHFLDVVWIFLFTVVYLMGVM 202
>gi|110635862|ref|YP_676070.1| cytochrome c oxidase, subunit III [Mesorhizobium sp. BNC1]
gi|110286846|gb|ABG64905.1| cytochrome bo3 quinol oxidase subunit 3 [Chelativorans sp. BNC1]
Length = 201
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA+ F TY V+ N A P P FD++ +F T++LL SS++ FA
Sbjct: 24 GFWLYLMSDAIIFALLFATYVVMAGNVADAPPPHSQFDLTHVFAETMILLASSITFGFAT 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A T R + WLLVT G+ F++ME+ EF +I+ A P +S LS+FF LVG H
Sbjct: 84 VAIGTGRRPAVQL-WLLVTFALGLGFVLMELTEFRSMIAAGAGPDQSGALSAFFTLVGTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GL+W+ V++ Q+ KGL RL L +FWHFLD+IWI +FS VYL G++
Sbjct: 143 GLHVSIGLVWILVMMAQVALKGLSVPVVSRLERLGLFWHFLDIIWIGIFSVVYLPGLI 200
>gi|283850556|ref|ZP_06367844.1| cytochrome o ubiquinol oxidase, subunit III [Desulfovibrio sp.
FW1012B]
gi|283574127|gb|EFC22099.1| cytochrome o ubiquinol oxidase, subunit III [Desulfovibrio sp.
FW1012B]
Length = 205
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 115/180 (63%), Gaps = 5/180 (2%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++F+ F TY VL NYA GP ++F + G + TI+LL SS + A
Sbjct: 28 GFWLYLMSDLILFSGLFATYVVLSHNYAGGPTGKELFHLPGALLETILLLCSSAAYGLAT 87
Query: 93 LA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVG 150
+A K L+ ++ L T G+ F+ ME EF +I A PQRS FLS+FF LVG
Sbjct: 88 VAMHKGRKDLL---LAGLGATFLLGLGFLAMEAAEFRQMILDGAGPQRSGFLSAFFTLVG 144
Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV GL+WL V++ Q+ KGL + Q RL+ L MFWHFLD++WI +FS VYLMGV+
Sbjct: 145 THGAHVACGLVWLVVMMGQVAAKGLTTPVQGRLMRLGMFWHFLDIVWIGLFSVVYLMGVM 204
>gi|311087360|gb|ADP67440.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
gi|311087858|gb|ADP67937.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. JF98 (Acyrthosiphon pisum)]
Length = 215
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Query: 2 SRQKIGKSP-NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
SR K+ ++ N ++ + G WIYLMSDC+MFAV F YA++ N +
Sbjct: 7 SRFKMIENKFNNTILNSNSSTHDKISETKKLFGLWIYLMSDCIMFAVLFAVYAIVSSNIS 66
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120
+F++S I + T +LLLSSLSC F ++A KR I S+L +T FG+IF++
Sbjct: 67 INLISNKIFNLSSILLETFLLLLSSLSCGFVVIAMNQKR-IKMIYSFLTITFIFGLIFLL 125
Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180
ME++EF LI P ++AF S FF LV HG+H+FFGLI + ++ QI K GL + +
Sbjct: 126 MEVHEFYELIIENFGPDKNAFFSIFFTLVATHGVHIFFGLILILSILYQIKKLGLTNSIR 185
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
R++C S+FWHFLD+IWICVF+FVYL G +
Sbjct: 186 TRILCFSVFWHFLDIIWICVFTFVYLNGAI 215
>gi|308070784|ref|YP_003872389.1| Quinol oxidase polypeptide III (Quinol oxidase aa3-600, subunit
qoxC) [Paenibacillus polymyxa E681]
gi|305860063|gb|ADM71851.1| Quinol oxidase polypeptide III (Quinol oxidase aa3-600, subunit
qoxC) [Paenibacillus polymyxa E681]
Length = 202
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L++D ++F+ F T+ VL N A GP ++F+++G+ + T +LL SS + A
Sbjct: 25 LGFWIFLVTDVILFSTLFATFVVLRNNTAGGPGGAELFNMTGVIIETFLLLTSSFTSGLA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+LA K + ++WL+VTA G+ FI E+YEF L+ A SAFLS+FF LVG
Sbjct: 85 VLA-MNKGSMKGLINWLIVTAILGLGFIGFEVYEFVELVHEGANYGTSAFLSAFFTLVGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV GL+W+ L+ Q+ K+GL + ++ LS++WHFLD +WI + + VYLMGV+
Sbjct: 144 HGLHVSLGLVWMIGLMFQLKKRGLTPETKGKVSALSLYWHFLDAVWIFLLTVVYLMGVM 202
>gi|148254208|ref|YP_001238793.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp.
BTAi1]
gi|146406381|gb|ABQ34887.1| cytochrome bb3 quinol oxidase subunit 3 [Bradyrhizobium sp. BTAi1]
Length = 213
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 127/215 (59%), Gaps = 12/215 (5%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDG-------TYLGFWIYLMSDCLMFAVFFVTYA 53
MS + ++P Y +HDG T GFWI+L+SD +MF+ FF ++A
Sbjct: 1 MSVSAVEQAPA----YADPHHLRAAEHDGPAPKRIVTGYGFWIFLLSDIVMFSCFFASFA 56
Query: 54 VLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAF 113
VL K A GP ++FDI + + T +LL+SS +C A +A+ + V+ + T
Sbjct: 57 VLSKATAGGPGGAELFDIRNVAIETALLLVSSFACGMASIAAERHSALWFQVA-MAATGL 115
Query: 114 FGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173
G F+++E EF L+ P RSAFLS+FF LVG HGLHV GL+WL ++ Q++ K
Sbjct: 116 LGAGFLLLEAREFTDLVGRGDGPSRSAFLSAFFTLVGCHGLHVGAGLLWLLTMMAQVMTK 175
Query: 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G + +RR++C ++FWH LD+IW+ VFS VYL+G
Sbjct: 176 GFRADIERRILCFALFWHALDIIWVAVFSVVYLLG 210
>gi|304407876|ref|ZP_07389527.1| cytochrome o ubiquinol oxidase, subunit III [Paenibacillus
curdlanolyticus YK9]
gi|304343359|gb|EFM09202.1| cytochrome o ubiquinol oxidase, subunit III [Paenibacillus
curdlanolyticus YK9]
Length = 206
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+LM+D ++F F Y VL N A GP ++F + G+ T +LL SS + A
Sbjct: 28 LGFWIFLMTDVIIFGCLFAVYVVLRNNTAGGPTAEELFKMPGVIAETFILLTSSFTSGLA 87
Query: 92 MLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME-AVPQRSAFLSSFFALV 149
+LA A K+ ++ ++WL VTA G FI +E+YEF +++ E A S FLS FF LV
Sbjct: 88 VLAMHAGKK--NQLITWLGVTAALGAAFIFLEVYEFVDMVNHEGATIATSGFLSGFFTLV 145
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL+W+ L++Q+ K+G+ +R++ LS++WHFLD++WI V + VYLMGV
Sbjct: 146 GTHGLHVSIGLVWMIGLMLQLRKRGITPVTKRKVEVLSLYWHFLDVVWIFVLTVVYLMGV 205
Query: 210 V 210
+
Sbjct: 206 M 206
>gi|310644020|ref|YP_003948778.1| transmembrane cytochrome o ubiquinol oxidase (subunit iii)
oxidoreductase protein [Paenibacillus polymyxa SC2]
gi|309248970|gb|ADO58537.1| Probable transmembrane cytochrome O ubiquinol oxidase (Subunit III)
oxidoreductase protein [Paenibacillus polymyxa SC2]
Length = 202
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L++D ++F+ F T+ VL N A GP ++F+++G+ + T +LL SS + A
Sbjct: 25 LGFWIFLVTDVILFSTLFATFVVLRNNTAGGPGGAELFNMTGVIIETFLLLTSSFTSGLA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+LA K + +SWL+VTA G+ FI E+YEF ++ A SAFLS+FF LVG
Sbjct: 85 VLA-MNKGSMKGLISWLIVTAILGLGFIGFEVYEFVEMVHEGANFGTSAFLSAFFTLVGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV GL+W+ L+ Q+ K+GL + ++ LS++WHFLD +WI + + VYLMGV+
Sbjct: 144 HGLHVSLGLVWMIGLMFQLKKRGLTPETKGKVSALSLYWHFLDAVWIFLLTVVYLMGVM 202
>gi|15617068|ref|NP_240281.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
gi|219681820|ref|YP_002468206.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|219682375|ref|YP_002468759.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|257471522|ref|ZP_05635521.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. LSR1 (Acyrthosiphon pisum)]
gi|11386747|sp|P57542|CYOC_BUCAI RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III
gi|25285512|pir||G84984 cytochrome o ubiquinol oxidase subunit III [imported] - Buchnera
sp. (strain APS)
gi|10039133|dbj|BAB13167.1| cytochrome o ubiquinol oxidase subunit III [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
gi|219622108|gb|ACL30264.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|219624663|gb|ACL30818.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|311086196|gb|ADP66278.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
gi|311086772|gb|ADP66853.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
Length = 205
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 1/205 (0%)
Query: 6 IGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP 65
I N ++ + G WIYLMSDC+MFAV F YA++ N +
Sbjct: 2 IENKFNNTILNSNSSTHDKISETKKLFGLWIYLMSDCIMFAVLFAVYAIVSSNISINLIS 61
Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125
+F++S I + T +LLLSSLSC F ++A KR I S+L +T FG+IF++ME++E
Sbjct: 62 NKIFNLSSILLETFLLLLSSLSCGFVVIAMNQKR-IKMIYSFLTITFIFGLIFLLMEVHE 120
Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185
F LI P ++AF S FF LV HG+H+FFGLI + ++ QI K GL + + R++C
Sbjct: 121 FYELIIENFGPDKNAFFSIFFTLVATHGVHIFFGLILILSILYQIKKLGLTNSIRTRILC 180
Query: 186 LSMFWHFLDLIWICVFSFVYLMGVV 210
S+FWHFLD+IWICVF+FVYL G +
Sbjct: 181 FSVFWHFLDIIWICVFTFVYLNGAI 205
>gi|332187386|ref|ZP_08389124.1| cytochrome c oxidase subunit III family protein [Sphingomonas sp.
S17]
gi|332012547|gb|EGI54614.1| cytochrome c oxidase subunit III family protein [Sphingomonas sp.
S17]
Length = 211
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 125/216 (57%), Gaps = 14/216 (6%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTY-------LGFWIYLMSDCLMFAVFFVTYA 53
MS+ PN K + + + DG GFWI+L+SD ++F+ FF YA
Sbjct: 1 MSQTAKAHDPN------KLGRATEPNPDGPAPKRIIVSYGFWIFLLSDFILFSCFFAAYA 54
Query: 54 VLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAF 113
VL A GP+ D+F++ + T +LLLSS +C A +A+ + + ++ + VTA
Sbjct: 55 VLHDATAGGPSGKDLFELPLVETETALLLLSSFACGLAGIATLARNMRWFQIA-MAVTAL 113
Query: 114 FGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173
G F+ +E +EF HLI P RSAFLS+FFALVG HG HV GL+WL ++ Q K
Sbjct: 114 LGAGFLALEAHEFLHLIGEGNGPGRSAFLSAFFALVGCHGFHVTLGLLWLTTMMAQTWAK 173
Query: 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G RR++C S+FWH LD+IW+ +F+ VYLMGV
Sbjct: 174 GFREDILRRILCFSLFWHALDIIWVALFTMVYLMGV 209
>gi|94498640|ref|ZP_01305193.1| cytochrome o ubiquinol oxidase subunit III [Sphingomonas sp. SKA58]
gi|94421935|gb|EAT06983.1| cytochrome o ubiquinol oxidase subunit III [Sphingomonas sp. SKA58]
Length = 161
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
+P Y ++ + T LGFW+YLMSDCL+FA+ F TYAVLG +YA GP P D
Sbjct: 7 NAPTEPRAYHLPEEPHLHEGHSTMLGFWMYLMSDCLIFAILFATYAVLGGSYAGGPGPKD 66
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+FD++ I ++T +LL SS++ FAMLA R I T WL VT FG F+ +E+YEF+
Sbjct: 67 LFDLNLIALNTAMLLFSSITYGFAMLAMEKNR-ISATQGWLFVTLLFGGAFLFIELYEFS 125
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
HLI A P RSAFLSSFF LVG HGLHV FG IWL
Sbjct: 126 HLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGSIWL 161
>gi|218288764|ref|ZP_03493027.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
LAA1]
gi|218241122|gb|EED08298.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
LAA1]
Length = 211
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 9/211 (4%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60
M G + +L Y + + + LGFWI+L +D ++F F TY VL +
Sbjct: 8 MEDTGGGGARALALEYTHAEDRTRI------LGFWIFLATDMILFGCLFATYLVLRTHTD 61
Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFI 119
GP P +FD+ G T+ LL SS + A L+ R K+V+ W+ VT G+ F+
Sbjct: 62 GGPTPATLFDMKGFGAETLALLTSSFTGGLATLSMRDGR--QKSVAFWMSVTIVLGLTFL 119
Query: 120 IMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179
+E EFAH + AV QRSAFLSSFF LVG HG HV FG++W+ V + Q+L++GL
Sbjct: 120 SIEASEFAHDAFIGAVWQRSAFLSSFFTLVGTHGCHVTFGVLWMLVTLYQVLRRGLTPRT 179
Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
R++ ++++WHFLD++WI +F+ VYL G+V
Sbjct: 180 ARKVFVVNLYWHFLDVVWIFIFTVVYLTGMV 210
>gi|27377827|ref|NP_769356.1| cytochrome O ubiquinol oxidase subunit III [Bradyrhizobium
japonicum USDA 110]
gi|7432917|pir||JC5901 bo-type ubiquinol oxidase (EC 1.10.3.-) chain III - Bradyrhizobium
japonicum
gi|27350972|dbj|BAC47981.1| cytochrome O ubiquinol oxidase subunit III [Bradyrhizobium
japonicum USDA 110]
Length = 213
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 25 VDHDG-------TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
V+H G T GFW++L+SD +MF+ FF YAVL A GP ++F+ + +
Sbjct: 21 VEHPGPASKRIVTAYGFWVFLLSDIVMFSCFFAAYAVLSGQTADGPKGSEIFEQRNVAIE 80
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T+ LLLSS +C A +A+ + + + VT G+IF+ +E EFA L++ P
Sbjct: 81 TVCLLLSSFTCGMASIAADVRNRFWFYLG-MAVTCVLGLIFLTIEFREFADLVARGYGPS 139
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
RSAFL+SFF+LVG HGLHV G++WL ++ Q+ KG + RR++C ++FWH LD+IW
Sbjct: 140 RSAFLTSFFSLVGCHGLHVSAGVLWLLTMMAQVFAKGFRADVLRRMMCFALFWHALDIIW 199
Query: 198 ICVFSFVYLMG 208
+ VFS VYL+G
Sbjct: 200 VGVFSVVYLLG 210
>gi|196020025|ref|XP_002119092.1| hypothetical protein TRIADDRAFT_35138 [Trichoplax adhaerens]
gi|190577011|gb|EDV18422.1| hypothetical protein TRIADDRAFT_35138 [Trichoplax adhaerens]
Length = 203
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 17 VKDKKESCVD-HDGTY----LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71
V + E D H G Y GFW+YL+SD ++FA F YAVL GP D+F+I
Sbjct: 6 VNIQDERFPDTHRGVYSKTIFGFWVYLLSDFMLFATLFAAYAVLRNATYGGPTAKDLFNI 65
Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131
+ T+VLL +SL+ + + +R I + + L T G++F+ ME EF HLI+
Sbjct: 66 HYTLIQTVVLLCASLTAGMGGVFAHKRRKIPTIICFTL-TFIVGLVFMAMEWGEFTHLIA 124
Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191
+ QRSAFLSS+F +VG HGLHV F L+W+ VL+ + K GL N RRL CL MFW
Sbjct: 125 SGSGWQRSAFLSSYFTVVGTHGLHVIFALLWVIVLLPPVFKDGLNPVNIRRLTCLRMFWQ 184
Query: 192 FLDLIWICVFSFVYLMGV 209
FL+++WI +F+ +YLMGV
Sbjct: 185 FLNVVWIFIFTIIYLMGV 202
>gi|433188|dbj|BAA02482.1| ubiquinol oxidase subunit III precursor [Acetobacter aceti]
gi|229365479|dbj|BAH57987.1| ubiquinol oxidase subunit III [Acetobacter lovaniensis]
Length = 201
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 120/179 (67%), Gaps = 2/179 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLM+DC++F F +AVL + GP ++F+ G+ + T +LL+SS++ F M
Sbjct: 24 GFWVYLMTDCIIFGTLFAAFAVLHNQFNGGPTGHELFEFGGLGLETALLLVSSITYGFGM 83
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A A K + K + WL +T G+ F+ +E+ EFAH+I+ A P RSAFLS+FF LV H
Sbjct: 84 IA-AHKSQVSKVILWLGLTFLLGLGFVGLELREFAHMIAEGAGPDRSAFLSAFFTLVSTH 142
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGN-QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHV GLIW+ L++Q++ I +L CLS+FWHFLD++WICVF++VYL ++
Sbjct: 143 GLHVTCGLIWIVTLIVQLMGTTEIPERMMNKLTCLSLFWHFLDIVWICVFTYVYLASMI 201
>gi|261420866|ref|YP_003254548.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp.
Y412MC61]
gi|297531651|ref|YP_003672926.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp. C56-T3]
gi|319768537|ref|YP_004134038.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp.
Y412MC52]
gi|261377323|gb|ACX80066.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp.
Y412MC61]
gi|297254903|gb|ADI28349.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp. C56-T3]
gi|317113403|gb|ADU95895.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp.
Y412MC52]
Length = 204
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +FA F TY VL + +GP ++F++ + + T++LL SS +C A
Sbjct: 26 LGFWIFLGAEVALFATLFATYLVLFQRTGSGPTAGELFEVKDVLIETLLLLTSSFTCGLA 85
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ R I ++WLLVT G FI EI EF H + A Q SAFLSSFF LVG
Sbjct: 86 IFEMRRGR-ISGLIAWLLVTLLLGAGFITFEIREFIHYVHEGATMQTSAFLSSFFVLVGT 144
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ +++IQ+L++G R++ +S++WHFLD++WI +F+ VYL+G+V
Sbjct: 145 HGAHVSLGIGWMILIIIQLLQRGFTPKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 203
>gi|149182657|ref|ZP_01861125.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. SG-1]
gi|148849626|gb|EDL63808.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. SG-1]
Length = 201
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +FA F YAVL + YA GP D+F + + V T++LL SS +C A
Sbjct: 23 LGFWIFLGAEIALFATLFAVYAVLSQRYAGGPTHQDIFMMKEVMVQTVLLLTSSFTCGLA 82
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ L ++WL++T G F+ MEI EF H + A Q SAFLSS F L+G
Sbjct: 83 IFEMRRGNL-KGLITWLIITLGLGAGFLYMEINEFIHYVHEGATMQTSAFLSSLFVLLGT 141
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV FG+ W +++IQ++K+GL R++ + ++WHFLD++WI +F+FVYL G++
Sbjct: 142 HGAHVTFGIFWAVMVIIQLVKRGLTPVTARKVFIIGLYWHFLDVVWIFIFTFVYLKGMM 200
>gi|114330710|ref|YP_746932.1| cytochrome c oxidase, subunit III [Nitrosomonas eutropha C91]
gi|114307724|gb|ABI58967.1| cytochrome bo3 quinol oxidase subunit 3 [Nitrosomonas eutropha C91]
Length = 223
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 116/192 (60%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ ++ + T GFW++LMSD ++F + F TYA L A P P +++ + IF+ T
Sbjct: 32 EHSDAHTQAEATVFGFWVFLMSDAIIFGMAFATYATLLHGTADSPGPRELYHLGPIFIET 91
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL SS + A +A K + V WLL+T G++F+ ME+ +F + + +P +
Sbjct: 92 LLLLTSSFTFGMASIAMKYKHPTSRLVGWLLITLVLGVVFLGMELNDFRAMFAAGGLPTQ 151
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
S FLS FF LV LHGLHV G IWL ++ QI GL S + L+ L++FWHFLD++WI
Sbjct: 152 SGFLSGFFGLVPLHGLHVMAGCIWLVCMLGQIAVHGLDSETKLGLLRLALFWHFLDIVWI 211
Query: 199 CVFSFVYLMGVV 210
+FS VYL G+
Sbjct: 212 FIFSVVYLAGLA 223
>gi|218289389|ref|ZP_03493623.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
LAA1]
gi|258510663|ref|YP_003184097.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|218240495|gb|EED07676.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
LAA1]
gi|257477389|gb|ACV57708.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 211
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 9 SPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
PN L Y +++ + GFW++L D ++F+ F TY V+ A GP +
Sbjct: 16 DPNVPLEYHEEENSLRIT------GFWLFLGQDMILFSSLFATYIVMHGRVAGGPTSQQL 69
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKT--VSWLLVTAFFGMIFIIMEIYEF 126
FD++G + TI LL SS +C LA+ R H+ + W+LVT G++F+ E+ EF
Sbjct: 70 FDVTGFTIETIALLFSSFTCG---LATYEMRRGHRNAVIGWILVTMALGLVFLGFEVTEF 126
Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
H + + A QRS FLS+F+ LVG HG HV GL+W+ +L+ Q+L++G+ R++
Sbjct: 127 IHDVGIGATLQRSGFLSAFYILVGTHGSHVTVGLLWVTLLIFQLLRRGITPVTARKVFLW 186
Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210
S++WHFLD +WI +F+ VYL G V
Sbjct: 187 SIYWHFLDAVWIFIFTVVYLTGKV 210
>gi|218514776|ref|ZP_03511616.1| putative cytochrome o ubiquinol oxidase subunit III [Rhizobium etli
8C-3]
Length = 130
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Query: 81 LLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
+L SS++ FAML + +T+ WL VT FG FI +E+YEF HLI A P RSA
Sbjct: 1 MLFSSITYGFAML-QMERNAKAETLFWLGVTGLFGAAFIGLELYEFIHLIHEGAGPTRSA 59
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
FLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+RRL+CLSMFWHFLD++WI V
Sbjct: 60 FLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANRRRLMCLSMFWHFLDVVWIGV 119
Query: 201 FSFVYLMGVV 210
FSFVYL+GV+
Sbjct: 120 FSFVYLLGVL 129
>gi|21672719|ref|NP_660786.1| cytochrome O ubiquinol oxidase C [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008332|sp|Q8K995|CYOC_BUCAP RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III
gi|21623362|gb|AAM67997.1| cytochrome o ubiquinol oxidase C [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 189
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 120/184 (65%), Gaps = 1/184 (0%)
Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86
+ G WIYLMSDC++FAV F YA++ N++ +F++S +F+ T++LLLSSL
Sbjct: 7 RNNKLFGLWIYLMSDCIIFAVLFAVYAIISSNFSTNLINHKIFNLSYVFLETLILLLSSL 66
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
S + K I +LL+T F G+ F++ME+ EF LI P + AF S FF
Sbjct: 67 SSG-MLTIQKNKNNIKIIYFYLLLTFFLGLSFLLMEVNEFYKLILENCSPSQHAFFSIFF 125
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
+VG+HG+HVFFGLI++ ++ Q+ G+ + + R++C S+FWHFLD+IWICVF+FVYL
Sbjct: 126 TIVGVHGIHVFFGLIFILSILYQLFYLGITNTIRIRILCFSLFWHFLDIIWICVFTFVYL 185
Query: 207 MGVV 210
GV+
Sbjct: 186 NGVI 189
>gi|260773171|ref|ZP_05882087.1| cytochrome O ubiquinol oxidase subunit III [Vibrio metschnikovii
CIP 69.14]
gi|260612310|gb|EEX37513.1| cytochrome O ubiquinol oxidase subunit III [Vibrio metschnikovii
CIP 69.14]
Length = 202
Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+Y++SDCL+F F +AV ++A P +FD+ + +T +LLLSSL+ AM
Sbjct: 26 GFWVYILSDCLLFGTLFAVFAVFSNSFAGMVEPSALFDLWFVAGTTALLLLSSLTFGMAM 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
L + +WL +T G F+IME+YEF HL A SA+ SSF+ALV H
Sbjct: 86 LKQNAHDM-KGMATWLGITFALGFGFLIMELYEFHHLSLAGATFSTSAYWSSFYALVATH 144
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
GLHVF GLIW+ +L + G + N+ RL LS+FWHFLD+IWICVFS VYLMGV+
Sbjct: 145 GLHVFAGLIWMIILFFHFKRDGFTTANKTRLALLSLFWHFLDIIWICVFSVVYLMGVM 202
>gi|146339412|ref|YP_001204460.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp.
ORS278]
gi|146192218|emb|CAL76223.1| cytochrome o ubiquinol oxidase, subunit III [Bradyrhizobium sp.
ORS278]
Length = 213
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 127/215 (59%), Gaps = 12/215 (5%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDG-------TYLGFWIYLMSDCLMFAVFFVTYA 53
MS + ++P Y +H G T GFWI+L+SD +MF+ FF ++A
Sbjct: 1 MSVTSVEQAPA----YADPHHLRVTEHPGPAPKRIVTGFGFWIFLLSDIVMFSCFFASFA 56
Query: 54 VLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAF 113
VL A GP +FDI + + T +LLLSS +C A +A+ + V+ + VT
Sbjct: 57 VLSGGTAGGPGGAQLFDIRNVAIETALLLLSSFTCGMASIAADRHNALWFQVA-MAVTGL 115
Query: 114 FGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173
G F+++E+ EFA L+ P RSAFLS+FF LVG HGLHV G++WL ++ Q++ K
Sbjct: 116 LGAAFLLLEVREFADLVGRGDGPSRSAFLSAFFTLVGCHGLHVAAGILWLLTMMAQVVAK 175
Query: 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G + +RR++C ++FWH LD+IW+ VFS VYL+G
Sbjct: 176 GFRADIERRILCFALFWHALDIIWVAVFSVVYLLG 210
>gi|296284678|ref|ZP_06862676.1| cytochrome c oxidase, subunit III [Citromicrobium bathyomarinum
JL354]
Length = 208
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--VLGKNYAAGPAPIDVFDISGIFVSTI 79
E+ D + T GFW++LMSD ++F + F +YA + A GP P D+FD++ + + T
Sbjct: 18 EAHEDAEKTVFGFWVFLMSDLIIFGILFASYASYLDPIGMAGGPGPKDLFDLTSVAIQTA 77
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
LL+ ++ + LA + K ++WLLV A G F+ E+ +F VPQ S
Sbjct: 78 FLLVGGIAYAGVSLALKYDQGREKIIAWLLVCAVLGAGFLFFEVKDFIAQAGEGGVPQAS 137
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
+LSS++ALVGLHG+HVF G++W+F + QI +GL + RL L +FWHFLDLIW+
Sbjct: 138 GWLSSYWALVGLHGIHVFSGILWIFATIGQIATRGLDDVVKVRLSMLGVFWHFLDLIWVG 197
Query: 200 VFSFVYLM 207
+FS V+L+
Sbjct: 198 IFSLVFLV 205
>gi|294498632|ref|YP_003562332.1| cytochrome o quinol oxidase subunit III [Bacillus megaterium QM
B1551]
gi|294348569|gb|ADE68898.1| cytochrome o quinol oxidase, subunit III [Bacillus megaterium QM
B1551]
Length = 199
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T +GFW++L++DC++F F TYAVL + A+G + F++ G T +LL SS +
Sbjct: 20 TVMGFWLFLVTDCILFGALFATYAVLVNHTASGLTGKEFFEVPGFVSETFILLTSSFTSG 79
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A+L S K I + WL+VT GM F+ +EI+EF ++ A SAF ++F+ LV
Sbjct: 80 LAVL-SMHKGKIKPLIGWLIVTLLLGMCFVGLEIHEFQTMVHEGATISTSAFFTAFYTLV 138
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HGLHV G+IW+ + IQ+ + G+ S +R++ +S++WHFLD +WI +++ VYLMGV
Sbjct: 139 STHGLHVSVGIIWMISITIQLKRYGITSVTKRKVTIISLYWHFLDAVWIFLYTVVYLMGV 198
>gi|56964156|ref|YP_175887.1| cytochrome caa3 oxidase subunit III CoxC [Bacillus clausii KSM-K16]
gi|56910399|dbj|BAD64926.1| cytochrome caa3 oxidase subunit III CoxC [Bacillus clausii KSM-K16]
Length = 207
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 117/191 (61%), Gaps = 2/191 (1%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
+ + ++ +LGFW +L + +MFA FF TY L GPA D+F + +F+ T+
Sbjct: 15 PERATLEGKNKFLGFWFFLGGETIMFATFFGTYLGLRNGVGNGPASTDLFTLPLVFLMTM 74
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQR 138
+LL SS++ FAM A K + ++W+++T G+ F+ +EIYEF H + E
Sbjct: 75 LLLTSSMTSVFAMFA-MKKNKFKQMMTWMIITVVLGLAFLGLEIYEFQHYVHDYEFGFTT 133
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+F+ LVGLHG HV FGL W+ +L+I+ + G+ N + S++WHF+D++W+
Sbjct: 134 SAFSSAFYTLVGLHGAHVLFGLGWITLLIIRNFRAGITLTNAPKFYVASLYWHFIDVVWV 193
Query: 199 CVFSFVYLMGV 209
+F+ VYLMGV
Sbjct: 194 FIFTVVYLMGV 204
>gi|294498140|ref|YP_003561840.1| cytochrome c oxidase subunit III [Bacillus megaterium QM B1551]
gi|295703491|ref|YP_003596566.1| cytochrome c oxidase subunit III [Bacillus megaterium DSM 319]
gi|294348077|gb|ADE68406.1| cytochrome c oxidase, subunit III [Bacillus megaterium QM B1551]
gi|294801150|gb|ADF38216.1| cytochrome c oxidase, subunit III [Bacillus megaterium DSM 319]
Length = 206
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 116/192 (60%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+++ ++ + GFW++L + ++FA F TY L + +GP P ++FDI +F +T
Sbjct: 15 SPEKATLEGKNKFTGFWLFLGGETVLFASLFATYLALRNSTMSGPKPEELFDIKLVFAAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL SSL+ +AM K WL VT G+ F+ +EIYEF H +
Sbjct: 75 MILLTSSLTSVYAMYHMKNFEF-KKMQLWLGVTWLLGLAFLGLEIYEFRHYVHEGHTFTS 133
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF SSF+ALVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+
Sbjct: 134 SAFGSSFYALVGTHGAHVTFGLLWIGSLMIRNAKRGLNLYNAPKYYVASLYWHFIDVVWV 193
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG+V
Sbjct: 194 FIFTVVYLMGMV 205
>gi|254512910|ref|ZP_05124976.1| Cytochrome o ubiquinol oxidase subunit 3 [Rhodobacteraceae
bacterium KLH11]
gi|221532909|gb|EEE35904.1| Cytochrome o ubiquinol oxidase subunit 3 [Rhodobacteraceae
bacterium KLH11]
Length = 210
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA 64
++P+ S + + H + + GFW++LMSD + F + F Y + GP
Sbjct: 3 RAPSHSYPGINLGEGHASAHKASEVVTFGFWVFLMSDLVYFGLMFAIYITMIDAQVGGPG 62
Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124
P ++FD+ IF T++LL SSL+ AMLA + V W VT G+ F+++EI
Sbjct: 63 PHELFDLKSIFAQTLILLTSSLTVGLAMLALKYNLPRARIVLWFGVTLVLGLSFLVLEIR 122
Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184
+F ++ + +PQRS FLS+++ LV LHGLHV G IWL VL +Q+ G+ R++
Sbjct: 123 DFINMAELGGMPQRSGFLSAYYGLVPLHGLHVAAGCIWLIVLGLQLRIMGMTDLVISRVV 182
Query: 185 CLSMFWHFLDLIWICVFSFVYLMGV 209
L++FWHFLDLIWI + + VY G+
Sbjct: 183 RLALFWHFLDLIWIGIITIVYFGGL 207
>gi|56421992|ref|YP_149310.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus kaustophilus
HTA426]
gi|56381834|dbj|BAD77742.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus kaustophilus
HTA426]
Length = 204
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +FA F TY VL + +GP ++F++ + + T++LL SS +C A
Sbjct: 26 LGFWIFLGAEVALFATLFATYLVLFQRTGSGPTAGELFEVKDVLIETLLLLTSSFTCGLA 85
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ R I ++WLLVT G+ FI EI EF H + A Q SAFLSSFF LVG
Sbjct: 86 IFEMRRGR-ISGLIAWLLVTLLLGVGFITFEIREFIHYVHEGATMQTSAFLSSFFVLVGT 144
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ +++IQ+L++G R++ +S++WHFLD++WI +F+ VYL+G+V
Sbjct: 145 HGAHVSVGIGWMILIIIQLLQRGFTPKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 203
>gi|295703991|ref|YP_003597066.1| cytochrome o quinol oxidase subunit III [Bacillus megaterium DSM
319]
gi|294801650|gb|ADF38716.1| cytochrome o quinol oxidase, subunit III [Bacillus megaterium DSM
319]
Length = 199
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
+GFW++L++DC++F F TYAVL + A G + F++ G T +LL SS + A
Sbjct: 22 IGFWLFLVTDCILFGALFATYAVLVNHTAGGLTGKEFFEVPGFVSETFILLTSSFTSGLA 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+L S K I + WL+VT GM F+ +EI+EF ++ A SAF ++F+ LV
Sbjct: 82 VL-SMHKGKIKPLIGWLIVTLLLGMCFVGLEIHEFQTMVHEGATISTSAFFTAFYTLVST 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HGLHV G+IW+ + IQ+ + G+ S +R++ +S++WHFLD +WI +++ VYLMGV
Sbjct: 141 HGLHVSVGIIWMISITIQLKRYGITSVTKRKVTIISLYWHFLDAVWIFLYTVVYLMGV 198
>gi|251794162|ref|YP_003008893.1| cytochrome o ubiquinol oxidase subunit III [Paenibacillus sp.
JDR-2]
gi|247541788|gb|ACS98806.1| cytochrome o ubiquinol oxidase, subunit III [Paenibacillus sp.
JDR-2]
Length = 208
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 112/180 (62%), Gaps = 5/180 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFW++L++D ++F F T++VL + GP P ++F++ G+ T +LL SS + A
Sbjct: 31 LGFWMFLITDVILFGTLFATFSVLHNSTNGGPTPHEMFEMPGVIAETFILLTSSFTSGIA 90
Query: 92 MLA--SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
+L K+ + + WL++TA G FI +E+ EF ++ S + S+FF LV
Sbjct: 91 VLQMHKGNKKGL---IGWLIITALLGASFIFLEVSEFIKMVDEGVTIGTSGYWSAFFTLV 147
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HGLHV GL W+ L+IQI K+G+ +R++ +S++WHFLD++WI V + VYLMGV
Sbjct: 148 GTHGLHVSVGLCWMVGLMIQIGKRGITPVTKRKVTIVSLYWHFLDVVWIFVLTVVYLMGV 207
>gi|319652992|ref|ZP_08007097.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. 2_A_57_CT2]
gi|317395341|gb|EFV76074.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. 2_A_57_CT2]
Length = 201
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFW++L ++ ++FA F Y VL + +A GP D+F I + + T++LL SS + A
Sbjct: 23 LGFWVFLGAEIVLFATLFGVYGVLYERFAGGPTHKDIFVIKDVMIQTVLLLTSSFTMGIA 82
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ L ++WL++T G F+ MEI EF H A Q SAFLSS F L+G
Sbjct: 83 IFEMRRHNL-KGLITWLVITLALGAGFLFMEINEFIHYAHEGATMQTSAFLSSLFVLLGT 141
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W +++IQ+LK+GL R+ + ++WHFLD++WI +F+FVYL G+V
Sbjct: 142 HGAHVTLGIGWATMVIIQLLKRGLTPTTARKTFIIGLYWHFLDVVWIFIFTFVYLKGLV 200
>gi|260430583|ref|ZP_05784556.1| CytOchrome o ubiquinol oxidase subunit 3 [Citreicella sp. SE45]
gi|260418612|gb|EEX11869.1| CytOchrome o ubiquinol oxidase subunit 3 [Citreicella sp. SE45]
Length = 209
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 6/212 (2%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKN 58
MS + N + K + + + GFWI+LMSD ++F + F +Y A
Sbjct: 1 MSGGNLHPGLNLGDHHGKAHRGA----EAVVFGFWIFLMSDVVIFGLVFASYLTAANPMG 56
Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118
A G P + FD+ +F T++LL SSL+ FA LA + WL V+ G+ F
Sbjct: 57 MAGGTGPAEAFDLGSVFAQTVILLASSLTFGFATLALRHEDGRRAIARWLAVSLLLGLGF 116
Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178
+ +E+ +FAH+I + AVPQRS + S+F+ LV LHGLH+ G +W+ V++ Q+ GL+
Sbjct: 117 LTLEMRDFAHMIEVGAVPQRSGYWSAFWGLVPLHGLHLAAGCLWIVVMLAQMATLGLVPA 176
Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ RL+ L +FWH LDLIW+ VFS VYL G++
Sbjct: 177 VKTRLLRLGLFWHCLDLIWVAVFSIVYLGGLM 208
>gi|138897018|ref|YP_001127471.1| cytochrome aa3 quinol oxidase polypeptide III [Geobacillus
thermodenitrificans NG80-2]
gi|134268531|gb|ABO68726.1| Cytochrome aa3 quinol oxidase polypeptide III [Geobacillus
thermodenitrificans NG80-2]
Length = 204
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F TY VL + +GP ++F + + + T++LL SS +C A
Sbjct: 26 LGFWIFLGAEVVLFATLFATYLVLFQRTGSGPTAQELFQVKDVLIETLLLLTSSFTCGLA 85
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ RL LLVT G+ FI E+ EF H + A Q SAFLSSFF LVG
Sbjct: 86 IFEMRRGRLAGLLAW-LLVTLLLGIGFITFEVREFIHYVHEGATMQTSAFLSSFFVLVGT 144
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ ++IQ+L++GL R++ +S++WHFLD++WI +F+ VYL+G+V
Sbjct: 145 HGAHVSLGIGWMIFIIIQLLQRGLTVKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 203
>gi|229541705|ref|ZP_04430765.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus coagulans
36D1]
gi|229326125|gb|EEN91800.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus coagulans
36D1]
Length = 202
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW++L ++ +FA F TY L A GP D+F++ G+ + T VLL SS +C
Sbjct: 22 TIFGFWVFLAAEITLFATLFATYFTLQHQTAGGPVQQDIFELKGVLIETFVLLTSSFTCG 81
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
A+ + R + W +VT G+ F+ EI EF I A SAFLS+F+ L+
Sbjct: 82 IAIF-NMRNRNKGAMLGWFIVTLLLGLTFVGFEINEFVTYIHDGATLPTSAFLSAFYVLL 140
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HG HV G++W ++IQ++++GL R+ +S++WHFLD++WI +F+FVYL G+
Sbjct: 141 GTHGCHVSLGILWGISIIIQLIRRGLTPMTARKFFVVSIYWHFLDVVWIFIFTFVYLGGL 200
Query: 210 V 210
+
Sbjct: 201 M 201
>gi|62263648|gb|AAX78180.1| unknown protein [synthetic construct]
Length = 235
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 43 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 102
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML ++ + H + +L +T F G+ FIIME++EF L SAFLSSF
Sbjct: 103 FTFGLAMLNRNSENINH-VIKFLWITFFLGLGFIIMEVHEFYELAIEGHTWSSSAFLSSF 161
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L LS+FWHFLD++WI VFS VY
Sbjct: 162 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLSLFWHFLDIVWIFVFSIVY 221
Query: 206 LMGVV 210
L+G V
Sbjct: 222 LLGAV 226
>gi|56707437|ref|YP_169333.1| cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110669908|ref|YP_666465.1| cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. tularensis FSC198]
gi|224456517|ref|ZP_03664990.1| cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254370870|ref|ZP_04986875.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. tularensis FSC033]
gi|254874274|ref|ZP_05246984.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. tularensis MA00-2987]
gi|56603929|emb|CAG44916.1| Cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320241|emb|CAL08299.1| Cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. tularensis FSC198]
gi|151569113|gb|EDN34767.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. tularensis FSC033]
gi|254840273|gb|EET18709.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. tularensis MA00-2987]
gi|282158579|gb|ADA77970.1| Cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. tularensis NE061598]
Length = 200
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 17 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 76
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML ++ + H + +L +T F G+ FIIME++EF L SAFLSSF
Sbjct: 77 FTFGLAMLNRNSENINH-VIKFLWITFFLGLGFIIMEVHEFYELAIEGHTWSSSAFLSSF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L LS+FWHFLD++WI VFS VY
Sbjct: 136 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLSLFWHFLDIVWIFVFSIVY 195
Query: 206 LMGVV 210
L+G V
Sbjct: 196 LLGAV 200
>gi|213857961|ref|ZP_03384932.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
Length = 132
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL SS++ A +A K + +SWL +T FG FI MEIYEF HLI P
Sbjct: 1 TFLLLFSSITYGMAAIA-MHKNNKSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPD 59
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IW
Sbjct: 60 RSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIW 119
Query: 198 ICVFSFVYLMGVV 210
ICVF+ VYLMG +
Sbjct: 120 ICVFTVVYLMGAM 132
>gi|126730196|ref|ZP_01746008.1| cytochrome o ubiquinol oxidase subunit III [Sagittula stellata
E-37]
gi|126709576|gb|EBA08630.1| cytochrome o ubiquinol oxidase subunit III [Sagittula stellata
E-37]
Length = 211
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
S P +L + D + GFWI+LMSD + FA+FF TYA A
Sbjct: 4 STANANSHPGLNLGPAHGQAHK--DAETVVFGFWIFLMSDLVTFAMFFATYAASIHATAG 61
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
GP D+ D++ I + T LL+SSL A +A T+ WLL + FG+ F+ +
Sbjct: 62 GPGNADIVDVTSIGLQTGALLISSLLFGIATVAMKHGSSPRSTILWLLASLAFGLCFLGL 121
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
E+ +F AVP RS +LS+++ALVGLHGLHV G + + V+ +QI G +
Sbjct: 122 EVRDFIDAAEKGAVPMRSGYLSAYWALVGLHGLHVTVGSLMILVVCVQIAIFGFADDVKT 181
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
R++ L ++WHFLD+IWI +FS V+L G++
Sbjct: 182 RVLRLGLYWHFLDIIWIGIFSVVFLPGLL 210
>gi|319760378|ref|YP_004124316.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus Blochmannia
vafer str. BVAF]
gi|318039092|gb|ADV33642.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus Blochmannia
vafer str. BVAF]
Length = 198
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAA---GPAPIDVFDISGIFVSTIVLLLSSLSCS 89
GFW+Y+MSDC++FA F + VL K+ +F+++ IF T++LLLSSL+C
Sbjct: 19 GFWLYIMSDCILFASLFAMHIVLSKHLNITVFDDHNNSIFNLNFIFSETVLLLLSSLACC 78
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
+M K K + W+ +T G+ FII+EIYEF HLI P +AF SSFF L+
Sbjct: 79 KSMFY-INKTWAQKFMQWICITELLGLCFIILEIYEFFHLIHHGYTPCYNAFFSSFFILI 137
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
G HG+HV GLIW+ +++IQ+ GL N RL CLS+FWHFLD++WICVF+ VYL+G+
Sbjct: 138 GTHGIHVIVGLIWIIIMIIQLTLNGLTQTNLIRLQCLSLFWHFLDIVWICVFTIVYLIGI 197
Query: 210 V 210
+
Sbjct: 198 L 198
>gi|289606612|emb|CBI61109.1| unnamed protein product [Sordaria macrospora]
Length = 118
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 86/107 (80%)
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
T+ WL +T FG+ F+ +E+YEF+HLI A PQRSAFLSSFF LVG HGLHV FG++WL
Sbjct: 12 TLRWLAITGVFGLCFLGIELYEFSHLIHEGAGPQRSAFLSSFFTLVGTHGLHVTFGIVWL 71
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
L++Q+ K GL + N RRL+CLS+FWHFLD++WI VF+FVYL+GV+
Sbjct: 72 VTLMVQVAKFGLGAANMRRLMCLSLFWHFLDVVWIGVFTFVYLLGVL 118
>gi|238783617|ref|ZP_04627638.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia bercovieri ATCC
43970]
gi|238715495|gb|EEQ07486.1| Cytochrome o ubiquinol oxidase subunit 3 [Yersinia bercovieri ATCC
43970]
Length = 139
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ V T +LL SS++ AML K ++ +WL +T FG+ F+ MEIYEF HLI+
Sbjct: 4 VLVETFLLLFSSITYGVAMLG-MNKGNKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEG 62
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
P RSAFLSSFFALV HG+HV GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFL
Sbjct: 63 YGPDRSAFLSSFFALVATHGIHVTAGLVWIIIMMIQVAKRGLNEMNRTRLMCLSLFWHFL 122
Query: 194 DLIWICVFSFVYLMG 208
D++WICVF+ VYL+G
Sbjct: 123 DVVWICVFTVVYLLG 137
>gi|311029888|ref|ZP_07707978.1| cytochrome c oxidase, subunit III [Bacillus sp. m3-13]
Length = 207
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--KNYAAGPAPIDVFDISGIFV 76
+++ ++ +LGFW++L + ++FA F TY L + +GP ++FD++ +F
Sbjct: 15 SPEKATLEGKNKFLGFWLFLGGETVLFASLFATYLALSGPDSIVSGPDQKELFDLALVFA 74
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
+T++LL SSL+ +AM K W+ +T G+ F+I+EIYEF H I +
Sbjct: 75 ATMILLTSSLTSVYAMYHMKNFNF-KKMQLWMGITWLLGLSFLILEIYEFNHYIHLGHTI 133
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SAF S+F+ LVG HG HVFFGL+W+ L+I+ +++GL N + S++WHF+D++
Sbjct: 134 TSSAFGSAFYVLVGTHGAHVFFGLLWIGTLLIRNMRRGLDLYNAPKFYVASLYWHFIDVV 193
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 194 WLFIFTVVYLMGLV 207
>gi|94495038|ref|ZP_01301619.1| cytochrome o ubiquinol oxidase subunit III [Sphingomonas sp. SKA58]
gi|94425304|gb|EAT10324.1| cytochrome o ubiquinol oxidase subunit III [Sphingomonas sp. SKA58]
Length = 208
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67
K +L K + +H GFWI+LMSD ++FA+ F TY V+ A GP P
Sbjct: 7 KHAGLNLGGTDAKTHAEAEH--AIFGFWIFLMSDAVIFALLFATYGVMLPATAGGPTPTS 64
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
VF I F T++LL SSL+ A +A + WL VT G+IF+ E ++F+
Sbjct: 65 VFKIGPTFAETLLLLTSSLTYGMASVAMKHGSPLGGIHRWLAVTLLLGLIFLAFEWHDFS 124
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
+ + A P RS FLS+FF LV LHGLHV G++W+ V+++Q+ GL + + L+ L
Sbjct: 125 DMFAQGAYPTRSGFLSAFFGLVPLHGLHVIAGIVWILVMMVQLRVFGLDARVKINLLRLG 184
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
+FWHFLD++WI +FS VYL G++
Sbjct: 185 LFWHFLDIVWIAIFSTVYLPGLL 207
>gi|118496811|ref|YP_897861.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. novicida U112]
gi|134302623|ref|YP_001122594.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. tularensis WY96-3418]
gi|194324508|ref|ZP_03058280.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. novicida FTE]
gi|208780574|ref|ZP_03247913.1| cytochrome o ubiquinol oxidase subunit III [Francisella novicida
FTG]
gi|254372175|ref|ZP_04987667.1| hypothetical protein FTCG_01558 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254373656|ref|ZP_04989140.1| cytochrome o ubiquinol oxidase subunit III [Francisella novicida
GA99-3548]
gi|118422717|gb|ABK89107.1| cytochrome bo terminal oxidase subunit III [Francisella novicida
U112]
gi|134050400|gb|ABO47471.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151569905|gb|EDN35559.1| hypothetical protein FTCG_01558 [Francisella novicida GA99-3549]
gi|151571378|gb|EDN37032.1| cytochrome o ubiquinol oxidase subunit III [Francisella novicida
GA99-3548]
gi|194321343|gb|EDX18829.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. novicida FTE]
gi|208743549|gb|EDZ89854.1| cytochrome o ubiquinol oxidase subunit III [Francisella novicida
FTG]
gi|328676273|gb|AEB27143.1| Cytochrome O ubiquinol oxidase subunit III [Francisella cf.
novicida Fx1]
Length = 200
Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 17 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 76
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML ++ + H + +L +T F G+ FIIME++EF L SAFLSSF
Sbjct: 77 FTFGLAMLNRNSENINH-VIKFLWITFFLGLGFIIMEVHEFYELAIEGHTWSSSAFLSSF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L L +FWHFLD++WI VFS VY
Sbjct: 136 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLGLFWHFLDIVWIFVFSIVY 195
Query: 206 LMGVV 210
L+G V
Sbjct: 196 LLGAV 200
>gi|254486919|ref|ZP_05100124.1| Cytochrome o ubiquinol oxidase subunit 3 [Roseobacter sp. GAI101]
gi|214043788|gb|EEB84426.1| Cytochrome o ubiquinol oxidase subunit 3 [Roseobacter sp. GAI101]
Length = 211
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61
S + P +L + D + GFWI+LMSD + FA+FF YA + A
Sbjct: 4 STSHLKSHPGLNLGAAHGQAHE--DAEPVVFGFWIFLMSDLVTFAMFFAVYATSLQATAG 61
Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121
GP D+ D++ I + T LL+SSL A +A + WL+ + FG+ F+ +
Sbjct: 62 GPGNADIVDVTSIALQTAALLVSSLLFGIATVAMKHGSAARTVIFWLIASLAFGLCFLGL 121
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
E+ +F AVP RS +LS+F+ALVGLHGLHV G I + V+ QI G S +
Sbjct: 122 EVRDFIDAAEKGAVPMRSGYLSAFWALVGLHGLHVAVGSIMILVVCAQIAFFGFASDVKT 181
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210
R++ L ++WHFLD+IWI +FS V+L G++
Sbjct: 182 RVLRLGLYWHFLDIIWIGIFSVVFLPGLL 210
>gi|49473794|ref|YP_031836.1| cytochrome o ubiquinol oxidase subunit III [Bartonella quintana
str. Toulouse]
gi|49239297|emb|CAF25623.1| Cytochrome o ubiquinol oxidase subunit III [Bartonella quintana
str. Toulouse]
Length = 221
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 21/198 (10%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+Y++SD ++F+ F ++AV +Y G + D++ + V T +LLLSS++ F M
Sbjct: 25 GFWVYILSDLILFSTLFSSFAVFSASYGGGKPGNEFIDLNFVLVETAILLLSSITYGFVM 84
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS----------MEAVPQR---- 138
+ A K I W+ VT FG FI MEIYEF L++ P +
Sbjct: 85 V-QAHKGNISGVRLWMTVTFVFGFCFIGMEIYEFHELLNEVFYYDPGAYAGIDPAKGLKL 143
Query: 139 ------SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
SA+ S+FFALVG HGLHV GL+W+ V+ + ++GL N+ RL CLS+FWH
Sbjct: 144 FGREVLSAYWSAFFALVGTHGLHVSVGLLWMIVMFFHLRRRGLDQDNKTRLACLSIFWHL 203
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++W+ VF+ VYL+G +
Sbjct: 204 LDIVWVGVFTMVYLLGAL 221
>gi|89255627|ref|YP_512988.1| cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. holarctica LVS]
gi|115314131|ref|YP_762854.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica OSU18]
gi|156501576|ref|YP_001427641.1| cytochrome C oxidase/ubiquinol oxidase subunit III [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167009931|ref|ZP_02274862.1| cytOchrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica FSC200]
gi|254367021|ref|ZP_04983057.1| cytochrome O ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica 257]
gi|254368562|ref|ZP_04984578.1| hypothetical protein FTAG_01546 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953474|ref|ZP_06558095.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica URFT1]
gi|295313272|ref|ZP_06803909.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica URFT1]
gi|89143458|emb|CAJ78634.1| Cytochrome O ubiquinol oxidase, subunit III [Francisella tularensis
subsp. holarctica LVS]
gi|115129030|gb|ABI82217.1| cytochrome o ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica OSU18]
gi|134252847|gb|EBA51941.1| cytochrome O ubiquinol oxidase subunit III [Francisella tularensis
subsp. holarctica 257]
gi|156252179|gb|ABU60685.1| cytochrome C oxidase/ubiquinol oxidase, subunit III [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157121465|gb|EDO65656.1| hypothetical protein FTAG_01546 [Francisella tularensis subsp.
holarctica FSC022]
Length = 200
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 17 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 76
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML ++ + H + +L +T F G+ FIIME++EF L SAFLSSF
Sbjct: 77 FTFGLAMLNHNSENINH-VIKFLWITFFLGLGFIIMEVHEFYELAIEGHTWSSSAFLSSF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L L +FWHFLD++WI VFS VY
Sbjct: 136 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLGLFWHFLDIVWIFVFSIVY 195
Query: 206 LMGVV 210
L+G V
Sbjct: 196 LLGAV 200
>gi|54113707|gb|AAV29487.1| NT02FT0910 [synthetic construct]
Length = 200
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 17 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 76
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML ++ + H + +L +T F G+ FIIME++EF L SAFLSSF
Sbjct: 77 FTFGLAMLNRNSENINH-VIKFLWITFFLGLGFIIMEVHEFYELAIEGHTWSSSAFLSSF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L LS+FWHFLD++WI VFS V+
Sbjct: 136 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLSLFWHFLDIVWIFVFSIVH 195
Query: 206 LMGVV 210
L+G V
Sbjct: 196 LLGAV 200
>gi|328675365|gb|AEB28040.1| Cytochrome O ubiquinol oxidase subunit III [Francisella cf.
novicida 3523]
Length = 200
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 17 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 76
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ AML ++ + H + +L +T F G+ FI+ME++EF L SAFLSSF
Sbjct: 77 FTFGLAMLNRNSENINH-VIKFLWITFFLGLGFIVMEVHEFYELAIEGHTWSSSAFLSSF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L L +FWHFLD++WI VFS VY
Sbjct: 136 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLGLFWHFLDIVWIFVFSIVY 195
Query: 206 LMGVV 210
L+G V
Sbjct: 196 LLGAV 200
>gi|27904894|ref|NP_778020.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|46395811|sp|Q89AA5|CYOC_BUCBP RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName:
Full=Cytochrome o ubiquinol oxidase subunit III
gi|27904292|gb|AAO27125.1| cytochrome O ubiquinol oxidase subunit III [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 194
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 4/194 (2%)
Query: 20 KKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76
KK+ +D + LGFW+YLMSDC++F F Y +L N A GP+ ++F + I +
Sbjct: 2 KKKYKIDTNIFSKELLGFWLYLMSDCIIFCTLFSVYFILVDNVAQGPSGHNIFQNNLIII 61
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
T +LL SS SC+ + K L + WL +T G++F+ +E++EF HLI++ P
Sbjct: 62 ETFLLLFSSFSCNLVLFEMKNKNL-YMVFLWLGITFLLGLLFVFLELFEFFHLINLGFGP 120
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
RS FLSSFF L+ HG+HV GLIW+ V++ + + + R++CL++FWHFLD++
Sbjct: 121 TRSGFLSSFFVLIATHGIHVISGLIWIIVMIKYVYTFNITNLIYYRMLCLNLFWHFLDIV 180
Query: 197 WICVFSFVYLMGVV 210
W+ +FSFVYL G+V
Sbjct: 181 WVFIFSFVYLFGMV 194
>gi|163867421|ref|YP_001608618.1| cytochrome o ubiquinol oxidase subunit III [Bartonella tribocorum
CIP 105476]
gi|161017065|emb|CAK00623.1| cytochrome o ubiquinol oxidase subunit III [Bartonella tribocorum
CIP 105476]
Length = 222
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 27/220 (12%)
Query: 17 VKDKKESCVD---HDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
V S VD HD + + GFW+Y++SD ++F+ F ++AV +Y G A + D
Sbjct: 4 VTMNNASTVDELHHDSSSVMTFGFWVYILSDLILFSTLFSSFAVFSASYGGGKAGNEFID 63
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ + V T LL SS++ FAM+ A K I W+ +T FG FI ME+YEF L+
Sbjct: 64 LKFVLVETAFLLFSSVTYGFAMV-QAHKNNISGVRLWMAITFVFGCCFIAMELYEFHELL 122
Query: 131 ------------------SMEAVPQR--SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQI 170
++ + SA+ S+FFALVG HGLHV GL+W+ V+ +
Sbjct: 123 GEVFYYDPNAYAGIDPATGLQLFGREILSAYWSAFFALVGTHGLHVSVGLLWMVVMFFHL 182
Query: 171 LKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ GL N+ RL CLS+FWH LD++WI VF+ VYL+G +
Sbjct: 183 RRNGLDQNNKTRLACLSIFWHLLDIVWIGVFTMVYLLGAL 222
>gi|319405034|emb|CBI78644.1| cytochrome o ubiquinol oxidase subunit III [Bartonella sp. AR 15-3]
Length = 223
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 24/214 (11%)
Query: 20 KKESCVDHDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76
E DH + + GFW+Y++SD ++F+ F ++AV +Y G A + +++ + V
Sbjct: 11 TDEYHHDHHNSSIMIFGFWVYILSDLILFSTLFSSFAVFSASYGGGKAGNEFINLNFVLV 70
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS----- 131
T+VLL SS++ FAM+ A K + K W+ +T G+ FI MEIYEF L++
Sbjct: 71 ETVVLLFSSITYGFAMVY-AHKGCLSKLRVWMAITFVLGLCFIGMEIYEFYELLNEVFYY 129
Query: 132 -------------MEAVPQR--SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLI 176
+++ + SA+ S+FFALVG HGLHV GL+W+ V+ + + GL
Sbjct: 130 DPNAYAGVDPATGIKSFGKNVLSAYWSAFFALVGTHGLHVSVGLLWMVVMFFHLHRSGLD 189
Query: 177 SGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
N+ RL CLS+FWH LD++WI VF+ VYL+G +
Sbjct: 190 QDNKTRLTCLSIFWHLLDIVWIGVFTMVYLLGAL 223
>gi|319403607|emb|CBI77192.1| cytochrome o ubiquinol oxidase subunit III [Bartonella rochalimae
ATCC BAA-1498]
Length = 223
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 120/198 (60%), Gaps = 21/198 (10%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+Y++SD ++F+ F ++AV +Y G A + +++ + V T +LLLSS++ FAM
Sbjct: 27 GFWVYILSDLVLFSTLFSSFAVFSASYGGGKAGNEFINLNFVLVETAILLLSSITYGFAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS------------------MEA 134
+ A K + K W+ +T FG+ F+ MEIYEF L++ +++
Sbjct: 87 V-YAHKGSLAKLRVWMAITFAFGLCFVGMEIYEFYELLNEVFYYDPNAYAGVDPTTGIKS 145
Query: 135 VPQR--SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
+ SA+ S+FFALVG HGLHV GL+W+ V+ + + GL N+ RL CLS+FWH
Sbjct: 146 FGRNVLSAYWSAFFALVGTHGLHVSVGLLWMVVMFFHLRRSGLDQDNKTRLTCLSIFWHL 205
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++W+ VF+ VYL+G +
Sbjct: 206 LDIVWVGVFTMVYLLGAL 223
>gi|167463409|ref|ZP_02328498.1| cytochrome aa3 quinol oxidase (subunit III) [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 206
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL A GP P D+F+I G+ + T +LL SS +C A
Sbjct: 28 LGFWIFLGAEIVLFSTLFATFMVLVNRVADGPTPQDLFEIKGVLIQTFLLLTSSFTCGIA 87
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ +R + V WL++T G+ F+ EI EF + A SAF SSFF L G
Sbjct: 88 V-HELRRRNVKGLVLWLVITLALGLGFLGFEIKEFVEYVHEGATIGTSAFWSSFFVLAGT 146
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ +++ Q+LK+GL ++ +S++WHFLD++WI +F+ VYL +V
Sbjct: 147 HGAHVTLGIGWMILIIFQLLKRGLTPFTSSKVFIVSLYWHFLDVVWIFIFTVVYLARMV 205
>gi|121602479|ref|YP_989522.1| cytochrome o ubiquinol oxidase, subunit III [Bartonella
bacilliformis KC583]
gi|120614656|gb|ABM45257.1| cytochrome o ubiquinol oxidase, subunit III [Bartonella
bacilliformis KC583]
Length = 221
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 114/198 (57%), Gaps = 21/198 (10%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+Y++SD + F+ F ++AV Y G A + +++ + T VLLLSSL+ F M
Sbjct: 25 GFWVYILSDLVAFSTLFSSFAVFSAAYGGGKAGNEFINLNFVLAETAVLLLSSLTYGFVM 84
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL--------------ISMEAVPQ- 137
+ L + W+ VT G+IFI MEIYEF L I +E Q
Sbjct: 85 IQVHKCNLAGVRL-WMAVTFVLGLIFIGMEIYEFHELLHEVYYYDATAYAGIDLETGKQI 143
Query: 138 -----RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
SA+ S+FFALVG+HGLHV GL+W+ V+ I + + GL N+ RL CLS+FWH
Sbjct: 144 FGREVLSAYWSAFFALVGMHGLHVSAGLLWMVVMFIHLRRNGLDQDNKTRLSCLSIFWHM 203
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++WI VF+ VYL+G +
Sbjct: 204 LDIVWIGVFTMVYLLGAL 221
>gi|322382244|ref|ZP_08056156.1| cytochrome quinol oxidase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153792|gb|EFX46161.1| cytochrome quinol oxidase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 191
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL A GP P D+F+I G+ + T +LL SS +C A
Sbjct: 13 LGFWIFLGAEIVLFSTLFATFMVLVNRVADGPTPQDLFEIKGVLIQTFLLLTSSFTCGIA 72
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ +R + V WL++T G+ F+ EI EF + A SAF SSFF L G
Sbjct: 73 V-HELRRRNVKGLVLWLVITLALGLGFLGFEIKEFVEYVHEGATIGTSAFWSSFFVLAGT 131
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ +++ Q+LK+GL ++ +S++WHFLD++WI +F+ VYL +V
Sbjct: 132 HGAHVTLGIGWMILIIFQLLKRGLTPFTSSKVFIVSLYWHFLDVVWIFIFTVVYLARMV 190
>gi|229086506|ref|ZP_04218678.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-44]
gi|228696823|gb|EEL49636.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-44]
Length = 207
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 118/194 (60%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLI-SMEAVP 136
++LL SSL+ +AM K K + WL+VT G+ F+ EIYEF H +
Sbjct: 75 MLLLTSSLTSVYAMYH--MKNFNFKQMQLWLIVTVLLGLGFLGFEIYEFYHYTHEFKHTM 132
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
+ SAF S+F+ALVG HGLHV FGL+W+ LV + K+GL N + S++WHF+D++
Sbjct: 133 RSSAFGSAFYALVGTHGLHVLFGLLWILTLVFRNAKRGLNLYNAPKFYVASIYWHFIDVV 192
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 193 WVFIFTVVYLMGMV 206
>gi|187932182|ref|YP_001892167.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. mediasiatica FSC147]
gi|187713091|gb|ACD31388.1| cytochrome bo terminal oxidase subunit III [Francisella tularensis
subsp. mediasiatica FSC147]
Length = 200
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
D GFWIY+MSDC++FA F T+AV K+ GP ++F + +FV T++LL+SS
Sbjct: 17 DGSKNVFGFWIYIMSDCVLFATLFATFAVFHKHTFGGPGAQELFSLPYVFVETMLLLISS 76
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
AML ++ + H + +L +T F G+ FIIME++EF L SAFLSSF
Sbjct: 77 FIFGLAMLNRNSENINH-VIKFLWITFFLGLGFIIMEVHEFYELAIEGHTWSSSAFLSSF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F LVG HGLHV GLIW+ ++ Q+ K G+ + +L L +FWHFLD++WI VFS VY
Sbjct: 136 FTLVGTHGLHVSMGLIWIVSMIFQLKKYGMNPMAKTKLTYLGLFWHFLDIVWIFVFSIVY 195
Query: 206 LMGVV 210
L+G V
Sbjct: 196 LLGAV 200
>gi|260430763|ref|ZP_05784735.1| CytOchrome o ubiquinol oxidase subunit 3 [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418204|gb|EEX11462.1| CytOchrome o ubiquinol oxidase subunit 3 [Silicibacter
lacuscaerulensis ITI-1157]
Length = 184
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 107/177 (60%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW++LMSD + F + F Y + A GP P ++FD+ IF T++LL SSL+ AM
Sbjct: 5 GFWVFLMSDLVYFGLMFGVYITMIDAQAGGPGPHELFDLYSIFAQTLILLTSSLTVGLAM 64
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
LA + V W VT G+ F+++EI +F + +PQRS FLS+F+ LV LH
Sbjct: 65 LALKYNLPRGRIVLWFAVTLLLGLSFLVLEIRDFMSMADKGGIPQRSGFLSAFYGLVPLH 124
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
GLHV G +WL VL IQ+ G+ R++ L++FWHFLDLIWI + + VY G+
Sbjct: 125 GLHVAAGCVWLVVLGIQLRVMGMTDLVVSRMVRLALFWHFLDLIWIGIITIVYFGGL 181
>gi|52080094|ref|YP_078885.1| cytochrome caa3 oxidase subunit III [Bacillus licheniformis ATCC
14580]
gi|52785468|ref|YP_091297.1| CtaE [Bacillus licheniformis ATCC 14580]
gi|319646131|ref|ZP_08000361.1| CtaE protein [Bacillus sp. BT1B_CT2]
gi|52003305|gb|AAU23247.1| cytochrome caa3 oxidase (subunit III) [Bacillus licheniformis ATCC
14580]
gi|52347970|gb|AAU40604.1| CtaE [Bacillus licheniformis ATCC 14580]
gi|317391881|gb|EFV72678.1| CtaE protein [Bacillus sp. BT1B_CT2]
Length = 207
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+++ ++ ++GFW++L + ++FA F TY L + A GP ++FD+ +F++T
Sbjct: 15 SPEKATLEGKNKFIGFWLFLGGETVLFASLFATYLALKNSNAGGPKTTEMFDMGLVFLAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVP- 136
++LL SSL+ +AM K K + WL +T G F+ +EIYEF H I
Sbjct: 75 MLLLTSSLTSVYAMYH--MKNFAFKKMQVWLGITVLLGAGFLALEIYEFTHYIHEYGFTI 132
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
Q SA S+F+ LVG HG HV FGL+W+ L+I+ +GL N + S++WHF+D++
Sbjct: 133 QSSALGSAFYTLVGTHGAHVTFGLLWILSLMIRNAGRGLSLYNAPKFFVASLYWHFIDVV 192
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 193 WVFIFTVVYLMGMV 206
>gi|294504896|ref|YP_003568958.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
Z176003]
gi|262362962|gb|ACY59683.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
D106004]
gi|262366881|gb|ACY63438.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
D182038]
gi|294355355|gb|ADE65696.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis
Z176003]
Length = 139
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ V T +LL SS++ AML +K + + +WL T FG+ FI ME+YEF LI
Sbjct: 4 VLVETFLLLFSSITYGVAMLG-MSKGSVKQVNTWLGFTFLFGLGFIAMELYEFHKLIEEG 62
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
P RS FLS++FALVG HGLHV GL W+ +++IQ+ ++GL S N+ RL+CLS+FWHFL
Sbjct: 63 YGPARSGFLSAYFALVGTHGLHVTAGLAWIIIMMIQVARRGLNSTNRTRLMCLSLFWHFL 122
Query: 194 DLIWICVFSFVYLMGVV 210
D++WICVF+ VYL+G +
Sbjct: 123 DVVWICVFTVVYLLGAI 139
>gi|319898315|ref|YP_004158408.1| cytochrome o ubiquinol oxidase subunit III [Bartonella clarridgeiae
73]
gi|319402279|emb|CBI75818.1| cytochrome o ubiquinol oxidase subunit III [Bartonella clarridgeiae
73]
Length = 223
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 124/214 (57%), Gaps = 24/214 (11%)
Query: 20 KKESCVDHDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76
E DH + + GFW+Y++SD ++F+ F ++AV +Y G A + +++ + V
Sbjct: 11 TNEYHHDHHNSSIMIFGFWVYILSDLILFSTLFSSFAVFSASYGGGKAGNEFINLNFVLV 70
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS----- 131
T +LLLSS++ FAM+ + L + V W+ +T G+ F+ ME+YEF L++
Sbjct: 71 ETTILLLSSITYGFAMVYAYKGSLANLRV-WMAITFALGLCFVGMELYEFHELLNEVFYY 129
Query: 132 -------------MEAVPQR--SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLI 176
+++ + SA+ S+FFALVG HGLHV GL+W+ V+ + + GL
Sbjct: 130 DPNAYVGIDPATGIKSFGRNVLSAYWSAFFALVGTHGLHVSVGLLWMVVMFFHLRRSGLD 189
Query: 177 SGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
N+ RL CLS+FWH LD++W+ VF+ VYL+G +
Sbjct: 190 QNNKTRLTCLSIFWHLLDIVWVGVFTMVYLLGAL 223
>gi|92118913|ref|YP_578642.1| cytochrome o ubiquinol oxidase subunit III [Nitrobacter
hamburgensis X14]
gi|91801807|gb|ABE64182.1| cytochrome bo3 quinol oxidase subunit 3 [Nitrobacter hamburgensis
X14]
Length = 205
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 111/184 (60%), Gaps = 2/184 (1%)
Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86
+ TY GFW+ LM D ++FA+ FV + + + A GPA +F + IF T++LL SS
Sbjct: 24 EEKTY-GFWLCLMGDAIVFALLFVIFVAMAHSTADGPAGHTLFRLPRIFAETMLLLASSA 82
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146
+ FA +A A + +TV WL VT G F+ MEI EF + +A P RS FLS+FF
Sbjct: 83 TFGFASVAIAAGQR-RRTVVWLGVTFLLGFGFVAMEISEFYSMAVADAGPWRSGFLSAFF 141
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
LVG HG HV GL+W+ +L ++ +GL RL L +FWHFL ++W+ +FS VYL
Sbjct: 142 TLVGTHGAHVSIGLVWIVLLGCEVTVRGLTPFAASRLYRLGLFWHFLVIVWVNIFSLVYL 201
Query: 207 MGVV 210
G++
Sbjct: 202 PGLL 205
>gi|319406524|emb|CBI80166.1| cytochrome o ubiquinol oxidase subunit III [Bartonella sp. 1-1C]
Length = 223
Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 119/198 (60%), Gaps = 21/198 (10%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+Y++SD ++F+ F ++AV +Y G A + +++ + V T +LLLSS++ FAM
Sbjct: 27 GFWVYILSDLILFSTLFSSFAVFSASYGGGKAGNEFINLNFVLVETAILLLSSITYGFAM 86
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS------------------MEA 134
+ A K + K W+ +T G+ F+ MEIYEF L++ +++
Sbjct: 87 V-YAHKGSLAKLRVWMAITFALGLCFVGMEIYEFYELLNEVFYYDPNAYAGVDPTTGIKS 145
Query: 135 VPQR--SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
+ SA+ S+FFALVG HGLHV GL+W+ V+ + + GL N+ RL CLS+FWH
Sbjct: 146 FGRNVLSAYWSAFFALVGTHGLHVSVGLLWMVVMFFHLRRSGLDQDNKTRLTCLSIFWHL 205
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++W+ VF+ VYL+G +
Sbjct: 206 LDIVWVGVFTMVYLLGAL 223
>gi|23098894|ref|NP_692360.1| cytochrome c oxidase subunit III [Oceanobacillus iheyensis HTE831]
gi|22777121|dbj|BAC13395.1| cytochrome c oxidase subunit III (aa3 type) [Oceanobacillus
iheyensis HTE831]
Length = 208
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 117/195 (60%), Gaps = 2/195 (1%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76
+D ++ ++ +LG WI+L + ++FA F TY L + A GP+ D++ + +F+
Sbjct: 14 TQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGPSTHDLYGLELVFL 73
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
T++LL SSL+ +A+ K W+ +TA G+ F+ EIYEFAH I
Sbjct: 74 MTVLLLTSSLTSVYAIYHMKNNDF-KKMQLWMGITAALGLAFLGFEIYEFAHYIHDYGFT 132
Query: 137 QRS-AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
RS AF S+F+ALVG HG HV FGL W+ L+++ K+GL N + +++WHF+D+
Sbjct: 133 FRSSAFGSAFYALVGFHGGHVVFGLSWIITLMVRNAKRGLNLYNAPKYNTFALYWHFIDV 192
Query: 196 IWICVFSFVYLMGVV 210
+W+ +F+ VYLMG+V
Sbjct: 193 VWVFIFTVVYLMGMV 207
>gi|326402945|ref|YP_004283026.1| cytochrome o ubiquinol oxidase subunit III [Acidiphilium multivorum
AIU301]
gi|325049806|dbj|BAJ80144.1| cytochrome o ubiquinol oxidase subunit III [Acidiphilium multivorum
AIU301]
Length = 204
Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 11/201 (5%)
Query: 16 YVKDKKESCVDHDG----TYLGFWIYLMSDCLMFAVFFVTYAVLGK--NYAAGPAPIDVF 69
+V+ + + HD TY GFW+Y+MSD L+FA F +Y VL N A GP +
Sbjct: 9 WVRGEPPA---HDAIGTQTY-GFWLYMMSDALIFAALFASYGVLDHAWNAAGGPTARAIV 64
Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129
F TI+L + LS S AM A +R +LLV A G F+ +E+ + L
Sbjct: 65 HPVEAFWQTILLFGAVLSGSLAM-AGMKRRSRPAAAGFLLVAALLGTGFVALELRDLVTL 123
Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189
+ P+RSAFLS FF LV HGLHV FGL+W+ V+++Q+L G + RL+ + MF
Sbjct: 124 VMAGDTPERSAFLSMFFLLVATHGLHVIFGLLWMGVMIVQVLAFGFTAPVVTRLLNMQMF 183
Query: 190 WHFLDLIWICVFSFVYLMGVV 210
W F IW+CVF FVYL G +
Sbjct: 184 WQFQAAIWVCVFVFVYLQGAM 204
>gi|148260101|ref|YP_001234228.1| Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein
[Acidiphilium cryptum JF-5]
gi|146401782|gb|ABQ30309.1| cytochrome bo3 quinol oxidase subunit 3 [Acidiphilium cryptum JF-5]
Length = 204
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 11/201 (5%)
Query: 16 YVKDKKESCVDHDG----TYLGFWIYLMSDCLMFAVFFVTYAVLGK--NYAAGPAPIDVF 69
+V+ + + HD TY GFW+Y+MSD L+FA F +Y VL N A GP +
Sbjct: 9 WVRGEPPA---HDAIGTQTY-GFWLYMMSDALIFAALFASYGVLDHAWNAAGGPTARAIV 64
Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129
F TI+L + LS S AM A +R +LLV A G F+ +E+ + L
Sbjct: 65 HPVEAFWQTILLFGAVLSGSLAM-AGMKRRSRPAAAGFLLVAALLGTGFVALELRDLVTL 123
Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189
+ P+RSAFLS FF LV HGLHV FGL+W+ V+++Q+L G + RL+ + MF
Sbjct: 124 VMAGDTPERSAFLSMFFLLVATHGLHVIFGLLWMGVMIVQVLAFGFTAPVVTRLLNMQMF 183
Query: 190 WHFLDLIWICVFSFVYLMGVV 210
W F IW+CVF FVYL G +
Sbjct: 184 WQFQAAIWVCVFVFVYLQGAM 204
>gi|15615176|ref|NP_243479.1| cytochrome caa3 oxidase (subunit III) [Bacillus halodurans C-125]
gi|10175234|dbj|BAB06332.1| cytochrome caa3 oxidase (subunit III) [Bacillus halodurans C-125]
Length = 206
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 2/192 (1%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
+ + ++ +LGFW +L + ++FA FF TY L A GP P D+F + +F+ T+
Sbjct: 15 PERATLEGKNKFLGFWFFLGGETILFATFFGTYLGLRSGTADGPLPQDIFALPLVFIMTM 74
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS-MEAVPQR 138
+LL SSL+ AM A+ K W+ +T G+ F+ EIYEF + E
Sbjct: 75 LLLTSSLTSVIAM-AAMKKNKFGAMKLWMWITVLLGLGFLGFEIYEFYEYVHHYELGFST 133
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF SSF++LVGLHG HV FGL W+ L+I+ + G+ N + S++WHF+D++W+
Sbjct: 134 SAFASSFYSLVGLHGAHVAFGLSWIITLLIRYNRSGITLTNAPKFYVASLYWHFIDVVWV 193
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMGV+
Sbjct: 194 FIFTVVYLMGVL 205
>gi|317129344|ref|YP_004095626.1| cytochrome-c oxidase [Bacillus cellulosilyticus DSM 2522]
gi|315474292|gb|ADU30895.1| Cytochrome-c oxidase [Bacillus cellulosilyticus DSM 2522]
Length = 205
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ +++ ++ ++GFW +L + ++FA F TY L GP P D+F + +F+
Sbjct: 13 PNPEKATLEGRNKFMGFWFFLGGETVLFASLFGTYLGLRGGTMNGPGPSDLFHLDLVFIM 72
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T++LL SSL+ FA++ S K ++W+ VT G+ F+ MEIYEF
Sbjct: 73 TMILLTSSLTSVFAVI-SMKKGNFKGLLAWMSVTVLLGLAFLGMEIYEFYDYYHKGLGYS 131
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF SSF+ LVG HG HV FG+ W+ L+I+ K GL N + ++WHF+D++W
Sbjct: 132 TSAFASSFYTLVGTHGAHVAFGIGWITTLIIRYRKSGLTLTNAPKFYTAVLYWHFIDVVW 191
Query: 198 ICVFSFVYLMGV 209
+ +FS VYLMG+
Sbjct: 192 VFIFSVVYLMGI 203
>gi|254503727|ref|ZP_05115878.1| cytochrome o ubiquinol oxidase, subunit III [Labrenzia alexandrii
DFL-11]
gi|222439798|gb|EEE46477.1| cytochrome o ubiquinol oxidase, subunit III [Labrenzia alexandrii
DFL-11]
Length = 204
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 115/191 (60%), Gaps = 1/191 (0%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
++E G GFW++LM D ++FA+ F TY VL N AAGP VFD+S + T
Sbjct: 15 EEEEHHSLRGREFGFWLFLMGDAVIFALLFATYVVLSGNSAAGPTSQQVFDLSHTAIETA 74
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
+LL+SSL+ A LA K + WLL+T G+ F+ ME+ EF +I A P S
Sbjct: 75 LLLVSSLTFGVASLA-MDKGHGRAVILWLLITLGLGLGFLAMEVLEFRGMILQGAGPDVS 133
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
F S+FF LVG+HG HV G I + V++ Q++ KGL + RL L +FWHFLD++WI
Sbjct: 134 GFFSAFFTLVGMHGAHVAMGSIGILVMIGQVMTKGLTLPVRSRLNRLGLFWHFLDIVWIG 193
Query: 200 VFSFVYLMGVV 210
+FS VYL GV+
Sbjct: 194 IFSVVYLPGVM 204
>gi|240849795|ref|YP_002971183.1| cytochrome o ubiquinol oxidase subunit III [Bartonella grahamii
as4aup]
gi|240266918|gb|ACS50506.1| cytochrome o ubiquinol oxidase subunit III [Bartonella grahamii
as4aup]
Length = 222
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 27/220 (12%)
Query: 17 VKDKKESCVD---HDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70
V S VD HD + + GFW+Y++SD ++F+ F ++AV +Y G A + D
Sbjct: 4 VTINNVSAVDEHHHDNSSVMTFGFWVYILSDLILFSTLFSSFAVFSASYGGGKAGNEFID 63
Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ + V T LL SS++ F M+ A K I W+ +T FG FI ME+YEF L+
Sbjct: 64 LKFVLVETAFLLFSSVTYGFTMV-QAHKNNISGVRLWMAITFVFGCCFIGMELYEFHELL 122
Query: 131 S------------------MEAVPQR--SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQI 170
++ + SA+ S+FFALVG HGLHV GL+W+ V+ +
Sbjct: 123 GEVFYYDPNAYAGIDPATGLQLFGREILSAYWSAFFALVGTHGLHVSVGLLWMVVMFFHL 182
Query: 171 LKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ GL N+ RL CLS+FWH LD++W+ VF+ VYL+G +
Sbjct: 183 RRNGLDQNNKTRLACLSIFWHLLDIVWVGVFTMVYLLGAL 222
>gi|319407992|emb|CBI81646.1| cytochrome o ubiquinol oxidase subunit III [Bartonella
schoenbuchensis R1]
Length = 221
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 27/216 (12%)
Query: 21 KESCVD---HDGTYL---GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
C D HD + + GFWIY++SD ++FA F +AV +Y G A + ++ +
Sbjct: 7 NNVCADEHHHDNSSVMIFGFWIYILSDLIVFATLFSGFAVFSASYGGGKAGSEFIHLNFV 66
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS--- 131
V T +LLLSS++ F M+ + L + W+ +T G FI MEIYEF L+S
Sbjct: 67 LVETAILLLSSITYGFVMVQTHKGNLAGVRL-WMAITFVLGSCFIGMEIYEFRELLSEVY 125
Query: 132 -----------------MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG 174
+ SA+ S+FFALVG HGLHV GL+W+ V+ + + G
Sbjct: 126 YYDAGAYAGVDLTTGTQLFGREVLSAYWSAFFALVGTHGLHVSVGLLWMIVMFFHLCRSG 185
Query: 175 LISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
L N+ RL CLS+FWH LD++W+ VF+ VYL+G +
Sbjct: 186 LDQNNKTRLTCLSIFWHLLDIVWVGVFTMVYLLGAL 221
>gi|49474942|ref|YP_032983.1| cytochrome o ubiquinol oxidase subunit III [Bartonella henselae
str. Houston-1]
gi|49237747|emb|CAF26939.1| Cytochrome o ubiquinol oxidase subunit III [Bartonella henselae
str. Houston-1]
Length = 221
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 21/198 (10%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+Y++SD ++F+ F ++AV +Y G A + D++ + V T +LLLSS++ F M
Sbjct: 25 GFWVYILSDLILFSTLFSSFAVFSASYGGGKAGNEFIDLNFVLVETAILLLSSITYGFVM 84
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI--------------------SM 132
+ A K I W+ +T G+ FI MEIYEF L+ +
Sbjct: 85 I-QAHKGNIGGVRLWMTITFVLGLFFIGMEIYEFHELLKEVFYYDPGAYAGIDPATGLQL 143
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
SA+ S+FFALVG HGLHV GL+W+ V+ I GL N+ RL CLS+FWH
Sbjct: 144 FGKEVLSAYWSAFFALVGTHGLHVSAGLLWMIVMFFHIHHCGLDQDNKTRLACLSIFWHL 203
Query: 193 LDLIWICVFSFVYLMGVV 210
LD++W+ VF+ VYL+G +
Sbjct: 204 LDIVWVGVFTMVYLLGAL 221
>gi|229083935|ref|ZP_04216238.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-44]
gi|228699370|gb|EEL52052.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-44]
Length = 200
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P D+F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPADLFEVKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W L T G F+ EI EF + A Q SAFLS FF L+G
Sbjct: 81 VIHEMRKNNQKAMLGWFLFTLLLGAGFLFFEIEEFIMYVGEGATLQTSAFLSGFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+WI +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWIFIYTLVYLNGMV 199
>gi|308173456|ref|YP_003920161.1| cytochrome caa3 oxidase subunit III [Bacillus amyloliquefaciens DSM
7]
gi|307606320|emb|CBI42691.1| cytochrome caa3 oxidase (subunit III) [Bacillus amyloliquefaciens
DSM 7]
gi|328553615|gb|AEB24107.1| cytochrome c oxidase, subunit III [Bacillus amyloliquefaciens
TA208]
gi|328911591|gb|AEB63187.1| cytochrome caa3 oxidase (subunit III) [Bacillus amyloliquefaciens
LL3]
Length = 207
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 118/194 (60%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+++ ++ +LGFW++L + ++FA F T+ L ++ A GP+ D+F++ +F++T
Sbjct: 15 SPEKATLEGKNKFLGFWLFLGGETVLFASLFATFLALRESKAGGPSTADMFELPIVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVP- 136
++LL SSL+ +AM K K + WLL+T G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMYH--MKNFSFKKMQVWLLITVLLGAGFLGVEIYEFKHYTHEFGFTI 132
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SA S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++
Sbjct: 133 TSSALGSAFYTLVGTHGAHVAFGLLWISALMIRNAKRGLSLYNAPKYYVASLYWHFIDVV 192
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 193 WVFIFTVVYLMGMV 206
>gi|229016030|ref|ZP_04172986.1| Quinol oxidase subunit 3 [Bacillus cereus AH1273]
gi|229022249|ref|ZP_04178794.1| Quinol oxidase subunit 3 [Bacillus cereus AH1272]
gi|228739052|gb|EEL89503.1| Quinol oxidase subunit 3 [Bacillus cereus AH1272]
gi|228745263|gb|EEL95309.1| Quinol oxidase subunit 3 [Bacillus cereus AH1273]
Length = 200
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 111/179 (62%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ K+ ++W ++T G F+ EI EF + A Q SAFLS+FF L+G
Sbjct: 82 -IHEMRKQNQKGMLAWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|157692164|ref|YP_001486626.1| cytochrome-c oxidase subunit III [Bacillus pumilus SAFR-032]
gi|194014225|ref|ZP_03052842.1| cytochrome c oxidase subunit 3 (cytochrome c oxidasepolypeptide
III) (cytochrome aa3 subunit 3) ( subunit 3)(Oxidase
aa(3) subunit 3) [Bacillus pumilus ATCC 7061]
gi|157680922|gb|ABV62066.1| cytochrome-c oxidase subunit III [Bacillus pumilus SAFR-032]
gi|194013251|gb|EDW22816.1| cytochrome c oxidase subunit 3 (cytochrome c oxidasepolypeptide
III) (cytochrome aa3 subunit 3) ( subunit 3)(Oxidase
aa(3) subunit 3) [Bacillus pumilus ATCC 7061]
Length = 206
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 118/194 (60%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+++ ++ ++GFW++L + ++FA F TY L + A G D+FD++ +F++T
Sbjct: 14 SPEKATLEGKNKFVGFWLFLGGETVLFASLFATYLALKNSNAGGAKTTDMFDLTLVFIAT 73
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLI-SMEAVP 136
++LL SSL+ +AM K K + WL VT G F+ +EIYEF H + + +
Sbjct: 74 MLLLTSSLTSVYAMYH--MKNFAFKKMQLWLGVTVLLGASFLGVEIYEFYHYVHAYDFTI 131
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SA SSF+ LVG HG HV FGL W+ L+I+ +++GL N + S++WHF+D++
Sbjct: 132 TSSALGSSFYTLVGTHGAHVAFGLCWITALMIRNMRRGLDLYNAPKYYVASLYWHFIDVV 191
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 192 WVFIFTVVYLMGMV 205
>gi|85717118|ref|ZP_01048078.1| cytochrome o ubiquinol oxidase subunit III [Nitrobacter sp.
Nb-311A]
gi|85696078|gb|EAQ33976.1| cytochrome o ubiquinol oxidase subunit III [Nitrobacter sp.
Nb-311A]
Length = 205
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+ L+SD ++FA+ F + V+ +N A A +F + IF +T++LL SS + A
Sbjct: 29 GFWLCLISDAIIFALLFAIFVVMAQNTADASAGRTLFQLPRIFAATVLLLASSATFGLAS 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A A ++ + + WL +T FG+ F+ EI EF + +A P R+ FLS+FFALVG H
Sbjct: 89 VAIAARQR-GRVIVWLGMTIMFGLGFVATEITEFHGMAVADAAPWRNGFLSAFFALVGTH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
G HV FGL+W+ +L +I +G RL L +FWHFL ++WI +FSFVYL
Sbjct: 148 GAHVSFGLVWIVLLGCEIALRGPTPIAASRLYRLGLFWHFLIIVWINIFSFVYL 201
>gi|327441188|dbj|BAK17553.1| heme/copper-type cytochrome/quinol oxidase, subunit 3 [Solibacillus
silvestris StLB046]
Length = 208
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 119/196 (60%), Gaps = 5/196 (2%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP--APIDVFDISGIF 75
K +++ ++ +G WI+L SD ++FA F TY L + AG A D++++ F
Sbjct: 14 KHPEQATMEGKNKLVGLWIFLASDTVLFASVFATYIALKDSGPAGMEFAAKDLYELPLAF 73
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTV-SWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
V T++LL SSL+ +AM + + V +W+ +T G+ F+ +EIYEF H + +
Sbjct: 74 VMTMLLLTSSLTSVYAMYH--MRNFNYSGVRTWMGITVLLGLGFLALEIYEFQHYVHIGF 131
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
+SAF S+FF LVG+HGLHV GL+W+ L+I+ +GL N + S++WHF+D
Sbjct: 132 GYTQSAFSSAFFTLVGMHGLHVIIGLVWITGLIIRNSSRGLNLYNAPKFFAASLYWHFID 191
Query: 195 LIWICVFSFVYLMGVV 210
++W+ +F+ VYLMGVV
Sbjct: 192 VVWVFIFTVVYLMGVV 207
>gi|163938625|ref|YP_001643509.1| cytochrome aa3 quinol oxidase subunit III [Bacillus
weihenstephanensis KBAB4]
gi|229131648|ref|ZP_04260529.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST196]
gi|163860822|gb|ABY41881.1| Cytochrome aa3 quinol oxidase subunit III [Bacillus
weihenstephanensis KBAB4]
gi|228651796|gb|EEL07752.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST196]
Length = 200
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ K ++W ++T G F+ EI EF + A Q SAFLS+FF L+G
Sbjct: 82 -IHEMRKHNQKGMLAWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|154685910|ref|YP_001421071.1| CtaE [Bacillus amyloliquefaciens FZB42]
gi|154351761|gb|ABS73840.1| CtaE [Bacillus amyloliquefaciens FZB42]
Length = 207
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 118/194 (60%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+++ ++ +LGFW++L + ++FA F T+ L ++ A GP+ ++F++ +F++T
Sbjct: 15 SPEKATLEGKNKFLGFWLFLGGETVLFASLFATFLALRESKAGGPSTAEMFELPIVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVP- 136
++LL SSL+ +AM K K + WLLVT G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMYH--MKNFSFKKMQVWLLVTVLLGAGFLGVEIYEFMHYTHEFGFTI 132
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SA S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++
Sbjct: 133 TSSALGSAFYTLVGTHGAHVAFGLLWISALMIRNAKRGLSLYNAPKYYVASLYWHFIDVV 192
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 193 WVFIFTVVYLMGMV 206
>gi|52082324|ref|YP_081115.1| cytochrome aa3 quinol oxidase subunit III [Bacillus licheniformis
ATCC 14580]
gi|52787715|ref|YP_093544.1| QoxC [Bacillus licheniformis ATCC 14580]
gi|319648198|ref|ZP_08002415.1| QoxC protein [Bacillus sp. BT1B_CT2]
gi|52005535|gb|AAU25477.1| cytochrome aa3 quinol oxidase (subunit III) [Bacillus licheniformis
ATCC 14580]
gi|52350217|gb|AAU42851.1| QoxC [Bacillus licheniformis ATCC 14580]
gi|317389833|gb|EFV70643.1| QoxC protein [Bacillus sp. BT1B_CT2]
Length = 204
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 107/179 (59%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +F+ F TYAVL A G P ++FD + + T +LL SS +C A
Sbjct: 25 LGFWIFLGAEIALFSTLFATYAVLHNRTAGGVLPAELFDAKLVLIMTFLLLTSSFTCGIA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + + W+++T G F+ E+YEF H + A SA+ S+FF L+G
Sbjct: 85 V-HEMRRGSLKGVMIWMIITLLLGAGFVSYELYEFNHYVHEGATLSTSAYWSAFFVLLGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV G+ W+ +++Q K+GL +L S++WHFLD++WI +F+ VYL+G+V
Sbjct: 144 HGLHVSIGIFWIIGILLQTKKRGLTPQTSAKLFISSLYWHFLDVVWIFIFTGVYLIGLV 202
>gi|229056468|ref|ZP_04195880.1| Quinol oxidase subunit 3 [Bacillus cereus AH603]
gi|229165641|ref|ZP_04293413.1| Quinol oxidase subunit 3 [Bacillus cereus AH621]
gi|228617815|gb|EEK74868.1| Quinol oxidase subunit 3 [Bacillus cereus AH621]
gi|228720865|gb|EEL72415.1| Quinol oxidase subunit 3 [Bacillus cereus AH603]
Length = 200
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIA 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ K ++W ++T G F+ EI EF I A Q SAFLS+FF L+G
Sbjct: 82 -IHEMRKHNQKGMLAWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|253574578|ref|ZP_04851919.1| cytochrome c oxidase subunit III [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846283|gb|EES74290.1| cytochrome c oxidase subunit III [Paenibacillus sp. oral taxon 786
str. D14]
Length = 208
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ LGFW++L + ++F F T+ L A GP+ ++F++ +T
Sbjct: 16 EPEKATLEGRNKILGFWLFLGGEAVLFGTLFATFLTLRNQIADGPSASELFNLGITAAAT 75
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-Q 137
+LL+SSL+ FA+ A + K WL VT G+ F+++EIYEFA + E
Sbjct: 76 FILLVSSLTSVFAIQA-MHRGDKGKLAGWLAVTVLLGLAFLVLEIYEFAEYVLHEDYGMT 134
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ LVG HG HV FG++W+ +L+ Q+ KKGL ++ +++WHF+D++W
Sbjct: 135 TSAFSSAFYTLVGFHGAHVLFGILWISLLIGQLFKKGLTVVTAPKIYVSAIYWHFIDVVW 194
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYL+G V
Sbjct: 195 VFIFTVVYLLGKV 207
>gi|207721796|ref|YP_002252234.1| transmembrane cytochrome o ubiquinol oxidase (subunit III) protein
[Ralstonia solanacearum MolK2]
gi|206586960|emb|CAQ17544.1| transmembrane cytochrome o ubiquinol oxidase (subunit III) protein
[Ralstonia solanacearum MolK2]
Length = 284
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ M
Sbjct: 35 GFWVYLMSDLILFASLFATFCVLRSATAGGPNGKELFDLSYVLIETGILLVSSITYGMVM 94
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+ + R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG H
Sbjct: 95 IGLQSGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGTH 153
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
GLHV GL+W+ VL+ QI +KGL + N RL
Sbjct: 154 GLHVASGLLWIAVLMWQISRKGLTATNSTRL 184
>gi|229162876|ref|ZP_04290833.1| Cytochrome c oxidase subunit 3 [Bacillus cereus R309803]
gi|228620758|gb|EEK77627.1| Cytochrome c oxidase subunit 3 [Bacillus cereus R309803]
Length = 207
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 114/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + G ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGATSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQ 137
++LL SSL+ +AM K WLL+T G+ F+ EIYEF H + +
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLITVLLGLGFLGFEIYEFYHYTHEFKHTMR 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W
Sbjct: 134 SSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|312112705|ref|YP_003991021.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp. Y4.1MC1]
gi|311217806|gb|ADP76410.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp.
Y4.1MC1]
Length = 204
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 114/179 (63%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +FA F TY VL + +GP ++F++ + + T++LL SS +C A
Sbjct: 26 LGFWIFLGAEVALFATLFATYLVLFQRTGSGPTAKELFEVKDVLIETLLLLTSSFTCGLA 85
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ RL ++WLLVT G FI EI EF H + A Q SAFLSSFF LVG
Sbjct: 86 VFEMRRNRL-SGLLTWLLVTLLLGAGFITFEIREFIHYVHEGATMQTSAFLSSFFVLVGT 144
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ +++IQIL++GL R++ +S++WHFLD++WI +F+ VYL G+V
Sbjct: 145 HGAHVSLGIGWMILIIIQILQRGLTPRTARKVFIVSLYWHFLDVVWIFIFTLVYLTGMV 203
>gi|229159780|ref|ZP_04287788.1| Quinol oxidase subunit 3 [Bacillus cereus R309803]
gi|228623717|gb|EEK80535.1| Quinol oxidase subunit 3 [Bacillus cereus R309803]
Length = 200
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF +S A Q SAFLS+FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFILTLLLGAGFLFFEIEEFILYVSEGATLQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|261404604|ref|YP_003240845.1| cytochrome-c oxidase [Paenibacillus sp. Y412MC10]
gi|329923617|ref|ZP_08279061.1| cytochrome C oxidase, subunit 3 [Paenibacillus sp. HGF5]
gi|261281067|gb|ACX63038.1| Cytochrome-c oxidase [Paenibacillus sp. Y412MC10]
gi|328941170|gb|EGG37469.1| cytochrome C oxidase, subunit 3 [Paenibacillus sp. HGF5]
Length = 206
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ LGFW++L + ++F F T+ L GP ++F + +T
Sbjct: 14 EPEKATLEGRNKVLGFWLFLGGEAVLFGTLFATFLALRGQNNEGPTAAELFSLPITAAAT 73
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL+SSL+ FA+ A + I K WL+VT G+ F+ +EIYEF + E+ +
Sbjct: 74 LILLVSSLTSVFAIQA-LHRHNIEKLKLWLIVTVVLGLGFLGLEIYEFYEYVVHESFNMK 132
Query: 139 -SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ LVG HG HV FG++W+ +L+ Q+ +KGL ++ +M+WHF+D++W
Sbjct: 133 TSAFSSAFYTLVGFHGAHVAFGVVWISLLIAQLYRKGLTVVTAPKVYVSAMYWHFIDVVW 192
Query: 198 ICVFSFVYLMGVV 210
+ +FS VYL+G V
Sbjct: 193 VFIFSVVYLLGKV 205
>gi|304405377|ref|ZP_07387036.1| Cytochrome-c oxidase [Paenibacillus curdlanolyticus YK9]
gi|304345416|gb|EFM11251.1| Cytochrome-c oxidase [Paenibacillus curdlanolyticus YK9]
Length = 206
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFVS 77
+ +++ ++ LGFW++L + ++F F + L G P ++F++S + ++
Sbjct: 14 EPEKATLEGRNKVLGFWLFLGGETVLFGTLFSAFLALRDKVGEGNPTANELFNLSTVAIA 73
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T +LL SSL+ FA+ A + + + + WL +T FG+ F+ +EIYEF +
Sbjct: 74 TFILLTSSLTSVFAIQAMHSGKK-NAMLGWLAITVLFGLGFLGLEIYEFYEYVHEGHGFT 132
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF SSF+ LVG HG HV FG+IW+ +L+ Q++KKGL +L M+WHF+D++W
Sbjct: 133 TSAFSSSFYTLVGFHGAHVAFGVIWISLLIGQVMKKGLNVVTAPKLYVAGMYWHFIDVVW 192
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG V
Sbjct: 193 VFIFTVVYLMGKV 205
>gi|315645044|ref|ZP_07898170.1| cytochrome c oxidase, subunit III [Paenibacillus vortex V453]
gi|315279465|gb|EFU42770.1| cytochrome c oxidase, subunit III [Paenibacillus vortex V453]
Length = 206
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ LGFW++L + ++F F T+ L GP ++F + +T
Sbjct: 14 EPEKATLEGRNKVLGFWLFLGGEAVLFGTLFATFLALRGQNNEGPTASELFSLPITAAAT 73
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL+SSL+ FA+ A + I K WL+VT G+ F+ +EIYEF I E+ +
Sbjct: 74 LILLVSSLTSVFAIQA-LHRHNIEKLKLWLIVTVALGLGFLGLEIYEFYEYIVHESFNMK 132
Query: 139 -SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ LVG HG HV FG++W+ +L+ Q+ +KGL ++ +M+WHF+D++W
Sbjct: 133 TSAFSSAFYTLVGFHGAHVAFGVVWISLLIAQLYRKGLTVVTAPKVYVSAMYWHFIDVVW 192
Query: 198 ICVFSFVYLMGVV 210
+ +FS VYL+G V
Sbjct: 193 VFIFSVVYLLGKV 205
>gi|295399679|ref|ZP_06809660.1| Cytochrome-c oxidase [Geobacillus thermoglucosidasius C56-YS93]
gi|312111802|ref|YP_003990118.1| cytochrome-c oxidase [Geobacillus sp. Y4.1MC1]
gi|294978082|gb|EFG53679.1| Cytochrome-c oxidase [Geobacillus thermoglucosidasius C56-YS93]
gi|311216903|gb|ADP75507.1| Cytochrome-c oxidase [Geobacillus sp. Y4.1MC1]
Length = 206
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 3/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ + + ++ +LGFW +L + ++FA F T+ L A GP ++F + +FVST
Sbjct: 15 EPERATLEGKNKFLGFWFFLGGETVLFASLFATFIALRDKTAGGPTSEELFQMPIVFVST 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
++LL SSL+ +A+ K K + W +T G+ F+ +EI+EF +
Sbjct: 75 MILLTSSLTSVYAI--HHMKNFDFKKMQLWFGITVLLGLAFLGLEIFEFYEYVHEGFKYS 132
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ LVGLHG HV FGL W+ L+I+ K+GL N + S++WHF+D++W
Sbjct: 133 TSAFSSAFYTLVGLHGSHVAFGLSWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVW 192
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 193 VFIFTVVYLMGMV 205
>gi|288553207|ref|YP_003425142.1| cytochrome caa3 subunit III [Bacillus pseudofirmus OF4]
gi|461797|sp|Q04442|COX3_BACPE RecName: Full=Cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|322150|pir||E45335 cytochrome-c oxidase (EC 1.9.3.1) chain III - Bacillus firmus
gi|142788|gb|AAA22366.1| cytochrome oxidase subunit III [Bacillus firmus]
gi|288544367|gb|ADC48250.1| cytochrome caa3 subunit III [Bacillus pseudofirmus OF4]
Length = 206
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 2/191 (1%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
+ + ++ +LGFW +L + ++FA FF T+ L A GP D+ + +F+ T+
Sbjct: 15 PERATLEGKNKFLGFWFFLGGETILFATFFGTFLGLRGGTADGPTSADLVALDLVFIMTM 74
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH-LISMEAVPQR 138
+LL SSL+ AM A K + W+ +T G+ F+ EIYEF H ++ +
Sbjct: 75 LLLTSSLTSVLAMFA-MKKNNFKAMMIWMWITVVLGLAFLGFEIYEFHHYVVDYQFGFST 133
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+F++LVGLHG HV FGL W+ VL+I+ K G+ N + ++WHF+D++W+
Sbjct: 134 SAFASAFYSLVGLHGAHVAFGLSWIIVLLIRYRKSGITLTNAPKFYVAGLYWHFIDVVWV 193
Query: 199 CVFSFVYLMGV 209
+F+ VYLMGV
Sbjct: 194 FIFTVVYLMGV 204
>gi|218895754|ref|YP_002444165.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus G9842]
gi|228963801|ref|ZP_04124941.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|218540782|gb|ACK93176.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus G9842]
gi|228795872|gb|EEM43340.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 200
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF I A Q SAFLS+FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|228913389|ref|ZP_04077022.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228846298|gb|EEM91317.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 200
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF I A Q SAFLS FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|461800|sp|Q03439|COX3_BACP3 RecName: Full=Cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III; AltName: Full=Oxidase aa(3)
subunit 3
gi|77450|pir||JX0142 cytochrome-c oxidase (EC 1.9.3.1) chain III - thermophilic
bacterium PS-3
gi|217151|dbj|BAA03047.1| cytochtome c oxidase subunit 3 [Bacillus sp. PS3]
Length = 207
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74
F ++ + ++ +LGFW++L + ++FA F TY L GP+ ++F + +
Sbjct: 12 FPAAPERNATLEGKNKFLGFWLFLGGETVLFASLFATYLALKDKTNGGPSAEELFQMPVV 71
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISME 133
F++T++LL SSL+ +A+ K K + W +T G F+ +EIYEF +
Sbjct: 72 FMATMLLLTSSLTSVYAIYH--MKNFDFKKMQLWFGITVLLGAGFLGLEIYEFNEYVHEG 129
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
SAF S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+
Sbjct: 130 HKFTTSAFASAFYTLVGTHGSHVAFGLLWILTLMIRNAKRGLNLYNAPKFYVASLYWHFI 189
Query: 194 DLIWICVFSFVYLMGVV 210
D++W+ +F+ VYLMG+V
Sbjct: 190 DVVWVFIFTVVYLMGMV 206
>gi|167461105|ref|ZP_02326194.1| cytochrome caa3 oxidase subunit III CoxC [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 318
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ LGFW++L + ++F F TY L + G ++F + I ++T
Sbjct: 127 EPEKATLEGKNKVLGFWLFLGGETVLFGCLFATYLALRNSVGDGKTSDELFQLPMIALAT 186
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
+LL SSL+ FA++A RL + WL ++ G+ F+ +EIYEF +
Sbjct: 187 FLLLTSSLTSVFAVMALHRHRL-QSMLRWLAISVVLGLAFLGLEIYEFVEYVHEGHGFTT 245
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF +SF++LVG HG HV FG++W+ +L+IQ KKGL + + +++WHF+D++W+
Sbjct: 246 SAFSTSFYSLVGFHGAHVLFGILWISLLIIQGSKKGLTTVTAPKFYIAALYWHFIDVVWV 305
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG V
Sbjct: 306 FIFTVVYLMGKV 317
>gi|228906454|ref|ZP_04070335.1| Quinol oxidase subunit 3 [Bacillus thuringiensis IBL 200]
gi|228975947|ref|ZP_04136468.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977448|ref|ZP_04137842.1| Quinol oxidase subunit 3 [Bacillus thuringiensis Bt407]
gi|229028500|ref|ZP_04184620.1| Quinol oxidase subunit 3 [Bacillus cereus AH1271]
gi|229095350|ref|ZP_04226342.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-29]
gi|229114300|ref|ZP_04243720.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-3]
gi|229171484|ref|ZP_04299068.1| Quinol oxidase subunit 3 [Bacillus cereus MM3]
gi|228612022|gb|EEK69260.1| Quinol oxidase subunit 3 [Bacillus cereus MM3]
gi|228669138|gb|EEL24560.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-3]
gi|228688209|gb|EEL42095.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-29]
gi|228732813|gb|EEL83675.1| Quinol oxidase subunit 3 [Bacillus cereus AH1271]
gi|228782272|gb|EEM30456.1| Quinol oxidase subunit 3 [Bacillus thuringiensis Bt407]
gi|228783783|gb|EEM31841.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228853181|gb|EEM97957.1| Quinol oxidase subunit 3 [Bacillus thuringiensis IBL 200]
gi|326938473|gb|AEA14369.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 200
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF I A Q SAFLS+FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|30018878|ref|NP_830509.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus cereus ATCC
14579]
gi|30260851|ref|NP_843228.1| quinol oxidase, subunit III [Bacillus anthracis str. Ames]
gi|42779848|ref|NP_977095.1| quinol oxidase, subunit III [Bacillus cereus ATCC 10987]
gi|47525982|ref|YP_017331.1| quinol oxidase subunit III [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183692|ref|YP_026944.1| quinol oxidase subunit III [Bacillus anthracis str. Sterne]
gi|49480265|ref|YP_034957.1| quinol oxidase subunit III (cytochrome c oxidase subunit III)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|52144610|ref|YP_082218.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III)
[Bacillus cereus E33L]
gi|65318129|ref|ZP_00391088.1| COG1845: Heme/copper-type cytochrome/quinol oxidase, subunit 3
[Bacillus anthracis str. A2012]
gi|118476379|ref|YP_893530.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III)
[Bacillus thuringiensis str. Al Hakam]
gi|165872914|ref|ZP_02217538.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0488]
gi|167635136|ref|ZP_02393452.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0442]
gi|167641848|ref|ZP_02400088.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0193]
gi|170689426|ref|ZP_02880617.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0465]
gi|170709008|ref|ZP_02899439.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0389]
gi|177652799|ref|ZP_02935172.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0174]
gi|190568584|ref|ZP_03021490.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis
Tsiankovskii-I]
gi|196035750|ref|ZP_03103153.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus W]
gi|196047115|ref|ZP_03114333.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
03BB108]
gi|206968469|ref|ZP_03229425.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH1134]
gi|206977812|ref|ZP_03238702.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
H3081.97]
gi|217958285|ref|YP_002336831.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH187]
gi|218232838|ref|YP_002365495.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus B4264]
gi|222094456|ref|YP_002528515.1| quinol oxidase, subunit iii (cytochrome c oxidase, subunit iii)
[Bacillus cereus Q1]
gi|225862679|ref|YP_002748057.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
03BB102]
gi|227816428|ref|YP_002816437.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
CDC 684]
gi|228932130|ref|ZP_04095021.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228957119|ref|ZP_04118889.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228983900|ref|ZP_04144093.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229042562|ref|ZP_04190305.1| Quinol oxidase subunit 3 [Bacillus cereus AH676]
gi|229108308|ref|ZP_04237927.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-15]
gi|229126127|ref|ZP_04255148.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-Cer4]
gi|229143425|ref|ZP_04271854.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST24]
gi|229188907|ref|ZP_04315940.1| Quinol oxidase subunit 3 [Bacillus cereus ATCC 10876]
gi|229601533|ref|YP_002865296.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0248]
gi|254684222|ref|ZP_05148082.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
CNEVA-9066]
gi|254725884|ref|ZP_05187666.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A1055]
gi|254734416|ref|ZP_05192129.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
Western North America USA6153]
gi|254742102|ref|ZP_05199789.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
Kruger B]
gi|254755776|ref|ZP_05207809.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
Vollum]
gi|254762358|ref|ZP_05214202.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
Australia 94]
gi|296501451|ref|YP_003663151.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus
thuringiensis BMB171]
gi|301052350|ref|YP_003790561.1| quinol oxidase subunit III [Bacillus anthracis CI]
gi|29894420|gb|AAP07710.1| Cytochrome aa3 quinol oxidase polypeptide III [Bacillus cereus ATCC
14579]
gi|30254300|gb|AAP24714.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
Ames]
gi|42735765|gb|AAS39703.1| quinol oxidase, subunit III [Bacillus cereus ATCC 10987]
gi|47501130|gb|AAT29806.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
'Ames Ancestor']
gi|49177619|gb|AAT52995.1| quinol oxidase, subunit III [Bacillus anthracis str. Sterne]
gi|49331821|gb|AAT62467.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51978079|gb|AAU19629.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III)
[Bacillus cereus E33L]
gi|118415604|gb|ABK84023.1| cytochrome aa3 quinol oxidase subunit 3 [Bacillus thuringiensis
str. Al Hakam]
gi|164711327|gb|EDR16880.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0488]
gi|167510196|gb|EDR85602.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0193]
gi|167529395|gb|EDR92146.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0442]
gi|170126110|gb|EDS95006.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0389]
gi|170666588|gb|EDT17360.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0465]
gi|172081833|gb|EDT66902.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0174]
gi|190560378|gb|EDV14357.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis
Tsiankovskii-I]
gi|195991717|gb|EDX55682.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus W]
gi|196022096|gb|EDX60785.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
03BB108]
gi|206737389|gb|EDZ54536.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH1134]
gi|206744009|gb|EDZ55426.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
H3081.97]
gi|217062978|gb|ACJ77228.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH187]
gi|218160795|gb|ACK60787.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus B4264]
gi|221238513|gb|ACM11223.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III)
[Bacillus cereus Q1]
gi|225788852|gb|ACO29069.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
03BB102]
gi|227007623|gb|ACP17366.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
CDC 684]
gi|228594612|gb|EEK52398.1| Quinol oxidase subunit 3 [Bacillus cereus ATCC 10876]
gi|228640053|gb|EEK96454.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST24]
gi|228657334|gb|EEL13151.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-Cer4]
gi|228675145|gb|EEL30370.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-15]
gi|228726781|gb|EEL77995.1| Quinol oxidase subunit 3 [Bacillus cereus AH676]
gi|228775813|gb|EEM24186.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228802566|gb|EEM49413.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228827558|gb|EEM73301.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229265941|gb|ACQ47578.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str.
A0248]
gi|296322503|gb|ADH05431.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus
thuringiensis BMB171]
gi|300374519|gb|ADK03423.1| quinol oxidase, subunit III [Bacillus cereus biovar anthracis str.
CI]
gi|324324742|gb|ADY20002.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 200
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF I A Q SAFLS FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|322383504|ref|ZP_08057279.1| cytochrome caa3 oxidase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321152216|gb|EFX45047.1| cytochrome caa3 oxidase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 193
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ LGFW++L + ++F F TY L + G ++F + I ++T
Sbjct: 2 EPEKATLEGKNKVLGFWLFLGGETVLFGCLFATYLALRNSVGDGKTSDELFQLPMIALAT 61
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
+LL SSL+ FA++A RL + WL ++ G+ F+ +EIYEF +
Sbjct: 62 FLLLTSSLTSVFAVMALHRHRL-QSMLRWLAISVVLGLAFLGLEIYEFVEYVHEGHGFTT 120
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF +SF++LVG HG HV FG++W+ +L+IQ KKGL + + +++WHF+D++W+
Sbjct: 121 SAFSTSFYSLVGFHGAHVLFGILWISLLIIQGSKKGLTTVTAPKFYIAALYWHFIDVVWV 180
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG V
Sbjct: 181 FIFTVVYLMGKV 192
>gi|327439285|dbj|BAK15650.1| heme/copper-type cytochrome/quinol oxidase, subunit 3 [Solibacillus
silvestris StLB046]
Length = 199
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82
S +++ GFW +L ++ ++F F +Y VL GP ++F+I + T +LL
Sbjct: 13 STEENNLKIFGFWTFLGAEIMLFGTLFASYFVLSGRTGDGPTAAEIFEIGPVLAETFILL 72
Query: 83 LSSLSCSFAMLASATKRLIHK--TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
SS + A+ A RL K T+S++ +T G FI +EIYEF H + + A SA
Sbjct: 73 TSSFTIGLAIHA---MRLGSKKATLSFMGITLLLGAAFISVEIYEFVHYVHVGAGITTSA 129
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
F S+ +G HGLHV FGL W ++IQI K+GL S + S++WHFLD++WI +
Sbjct: 130 FTSALLTTLGTHGLHVTFGLFWGIFIMIQIAKRGLNSVTAGKTFVFSLYWHFLDVVWIFI 189
Query: 201 FSFVYLMGVV 210
FSF+YL G++
Sbjct: 190 FSFIYLKGMM 199
>gi|295402442|ref|ZP_06812395.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus
thermoglucosidasius C56-YS93]
gi|294975533|gb|EFG51158.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus
thermoglucosidasius C56-YS93]
Length = 204
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +FA F TY VL + +GP ++F++ + + T++LL SS +C A
Sbjct: 26 LGFWIFLGAEVALFATLFATYLVLFQRTGSGPTAKELFEVKDVLIETLLLLTSSFTCGLA 85
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ R ++WLLVT G FI EI EF H + A Q SAFLSSFF LVG
Sbjct: 86 VFEMRRNRF-SGLLTWLLVTLLLGAGFITFEIREFIHYVHEGATMQTSAFLSSFFVLVGT 144
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+ W+ +++IQIL++GL R++ +S++WHFLD++WI +F+ VYL G+V
Sbjct: 145 HGAHVSLGIGWMILIIIQILQRGLTPRTARKVFIVSLYWHFLDVVWIFIFTLVYLTGMV 203
>gi|289551129|ref|YP_003472033.1| quinol oxidase polypeptide III QoxC [Staphylococcus lugdunensis
HKU09-01]
gi|315658630|ref|ZP_07911500.1| quinol oxidase subunit III [Staphylococcus lugdunensis M23590]
gi|289180661|gb|ADC87906.1| quinol oxidase polypeptide III QoxC [Staphylococcus lugdunensis
HKU09-01]
gi|315496261|gb|EFU84586.1| quinol oxidase subunit III [Staphylococcus lugdunensis M23590]
Length = 201
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 6/195 (3%)
Query: 20 KKESCVDHDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIF 75
K H+G LGFWI+L ++ +F F T L G +YA G D+F++ +
Sbjct: 6 KTIDARTHEGELNKLGFWIFLTAEFALFGTLFATLLTLQHGGDYA-GKLTTDLFELKLVL 64
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
+ T LLLSS +C A+ ++ + + W+++T G++F+ EIYEFAH S
Sbjct: 65 IMTFALLLSSYTCGIAIYYMRKEKQ-NLMMLWMIITLALGLVFVGFEIYEFAHYASEGVN 123
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
P +F SSFF L+G HG HV G++W+ L+IQ+ +GL N +L +S++WHFLD+
Sbjct: 124 PTIGSFWSSFFILLGTHGAHVSLGIVWIICLLIQVATRGLNKYNAPKLFIVSLYWHFLDV 183
Query: 196 IWICVFSFVYLMGVV 210
+WI +F+ VY++G+V
Sbjct: 184 VWIFIFTAVYMIGMV 198
>gi|75762630|ref|ZP_00742475.1| Cytochrome aa3 quinol oxidase polypeptide III [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74489877|gb|EAO53248.1| Cytochrome aa3 quinol oxidase polypeptide III [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 182
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 4 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 62
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF I A Q SAFLS+FF L+G
Sbjct: 63 VIHEMRKHNQKAMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 122
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 123 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 181
>gi|229101461|ref|ZP_04232202.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-28]
gi|228681949|gb|EEL36085.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-28]
Length = 200
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF + A Q SAFLS+FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|47568831|ref|ZP_00239525.1| cytochrome c oxidase subunit III [Bacillus cereus G9241]
gi|228951199|ref|ZP_04113314.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229068385|ref|ZP_04201688.1| Quinol oxidase subunit 3 [Bacillus cereus F65185]
gi|229078012|ref|ZP_04210621.1| Quinol oxidase subunit 3 [Bacillus cereus Rock4-2]
gi|229149039|ref|ZP_04277283.1| Quinol oxidase subunit 3 [Bacillus cereus m1550]
gi|229177229|ref|ZP_04304616.1| Quinol oxidase subunit 3 [Bacillus cereus 172560W]
gi|47554507|gb|EAL12864.1| cytochrome c oxidase subunit III [Bacillus cereus G9241]
gi|228606235|gb|EEK63669.1| Quinol oxidase subunit 3 [Bacillus cereus 172560W]
gi|228634421|gb|EEK91006.1| Quinol oxidase subunit 3 [Bacillus cereus m1550]
gi|228705350|gb|EEL57727.1| Quinol oxidase subunit 3 [Bacillus cereus Rock4-2]
gi|228714846|gb|EEL66718.1| Quinol oxidase subunit 3 [Bacillus cereus F65185]
gi|228808496|gb|EEM55000.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 200
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C
Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI- 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
++ K + W ++T G F+ EI EF I A Q SAFLS FF L+G
Sbjct: 81 VIHEMRKHNQKAMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199
>gi|226329081|ref|ZP_03804599.1| hypothetical protein PROPEN_02984 [Proteus penneri ATCC 35198]
gi|225202267|gb|EEG84621.1| hypothetical protein PROPEN_02984 [Proteus penneri ATCC 35198]
Length = 115
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 79/102 (77%)
Query: 107 WLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVL 166
WL VT FG+ F+IME+YEF LI+ P RSAFLS+FFALV HGLHV GLIW+ ++
Sbjct: 12 WLFVTFLFGLGFVIMEVYEFHELIAEGYGPDRSAFLSAFFALVSTHGLHVTAGLIWIVIM 71
Query: 167 VIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
+IQ+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYLMG
Sbjct: 72 MIQVSRRGLTEVNRTRLSCLSLFWHFLDVVWICVFTVVYLMG 113
>gi|172057995|ref|YP_001814455.1| cytochrome c oxidase subunit III [Exiguobacterium sibiricum 255-15]
gi|171990516|gb|ACB61438.1| cytochrome c oxidase subunit III [Exiguobacterium sibiricum 255-15]
Length = 209
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 3/203 (1%)
Query: 10 PNFSLFYVKDKKE-SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-AGPAPID 67
PN + + D E + ++ Y+ FW +L + +FA F TY L + A G D
Sbjct: 7 PNNPITGIPDHVEKATLEGKNKYVAFWFFLGGETTLFASLFGTYIGLHNSGAKEGLRSYD 66
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+F++ +F+ T++LL SSL+ AM+A + + K WL++T G+ F+ EIYEF
Sbjct: 67 IFEMGLVFIMTMLLLTSSLTSVLAMMA-MKRNDVKKMKMWLIITLALGLGFLSGEIYEFN 125
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
H + SAF S+F+ LVG HG HV FGL+W+ L+I+ +G+ N + S
Sbjct: 126 HYYHIGHTFTSSAFGSAFYTLVGFHGAHVLFGLLWISTLLIRNWNRGITVVNAPKYYVSS 185
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
++WHF+D++W+ +FS VYLMG+V
Sbjct: 186 LYWHFIDVVWVFIFSVVYLMGMV 208
>gi|196249841|ref|ZP_03148537.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp.
G11MC16]
gi|196210717|gb|EDY05480.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp.
G11MC16]
Length = 176
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 37 YLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASA 96
+L ++ ++FA F TY VL + +GP ++F + + + T++LL SS +C A+
Sbjct: 3 FLGAEVVLFATLFATYLVLFQRTGSGPTAQELFQVKDVLIETLLLLTSSFTCGLAIFEMR 62
Query: 97 TKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHV 156
RL ++WLLVT G+ FI E+ EF H + A Q SAFLSSFF LVG HG HV
Sbjct: 63 RGRLA-GLLAWLLVTLLLGIGFITFEVREFIHYVHEGATMQTSAFLSSFFVLVGTHGAHV 121
Query: 157 FFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G+ W+ ++IQ+L++GL R++ +S++WHFLD++WI +F+ VYL+G+V
Sbjct: 122 SLGIGWMIFIIIQLLQRGLTVKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 175
>gi|205373048|ref|ZP_03225854.1| CtaE [Bacillus coahuilensis m4-4]
Length = 216
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA-PIDVFDISGIFVSTI 79
+ + V + GFW +L + ++FA F TY L G ++FD+ +FV+T+
Sbjct: 25 RVTNVRRKNKFYGFWFFLGGETVLFASLFATYLALKDKVLPGQKVAAEIFDLPLVFVATM 84
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-QR 138
+LL SSL+ +AM V+WL +T G F+ +E+YEF H +
Sbjct: 85 LLLTSSLTSVYAMHHMKNYNF-RGMVAWLFITVALGAAFLGLEVYEFYHYVHAYGHTFTS 143
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+F+ALVG HGLHV FGL+W+ L+I+ K+GL N + S++WHF+D++W+
Sbjct: 144 SAFGSAFYALVGTHGLHVAFGLLWITTLLIRNRKRGLSLYNAPKFYVASLYWHFIDVVWV 203
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG+V
Sbjct: 204 FIFTVVYLMGLV 215
>gi|239636438|ref|ZP_04677440.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus warneri
L37603]
gi|239597793|gb|EEQ80288.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus warneri
L37603]
Length = 201
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 115/188 (61%), Gaps = 6/188 (3%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI+L ++ +F F T L G +YA G ++F++ + + T LL
Sbjct: 13 HEGELNKLGFWIFLTAEFALFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFALL 71
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
LSS +C A+ ++ + + W+++T G++F+ EIYEFAH + P +F
Sbjct: 72 LSSYTCGIAIYYMRKEKQ-NLMMFWMILTVLLGLVFVGFEIYEFAHYATEGVNPTIGSFW 130
Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
SSFF L+G HG HV G++W+ L+IQI +GL S N +L +S++WHFLD++WI +F+
Sbjct: 131 SSFFILLGTHGCHVSVGIVWIICLLIQIATRGLDSYNAPKLFIVSLYWHFLDVVWIFIFT 190
Query: 203 FVYLMGVV 210
VY++G+V
Sbjct: 191 AVYMIGMV 198
>gi|56419619|ref|YP_146937.1| cytochrome c oxidase subunit III [Geobacillus kaustophilus HTA426]
gi|261419281|ref|YP_003252963.1| cytochrome-c oxidase [Geobacillus sp. Y412MC61]
gi|297530749|ref|YP_003672024.1| cytochrome-c oxidase [Geobacillus sp. C56-T3]
gi|319766097|ref|YP_004131598.1| cytochrome-c oxidase [Geobacillus sp. Y412MC52]
gi|56379461|dbj|BAD75369.1| cytochrome c oxidase subunit III [Geobacillus kaustophilus HTA426]
gi|261375738|gb|ACX78481.1| Cytochrome-c oxidase [Geobacillus sp. Y412MC61]
gi|297254001|gb|ADI27447.1| Cytochrome-c oxidase [Geobacillus sp. C56-T3]
gi|317110963|gb|ADU93455.1| Cytochrome-c oxidase [Geobacillus sp. Y412MC52]
Length = 206
Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV 80
+ + ++ +LGFW++L + ++FA F TY L GP+ ++F + +F++T++
Sbjct: 17 ERATLEGKNKFLGFWLFLGGETVLFASLFATYLALKDKTNGGPSAEELFQMPVVFMATML 76
Query: 81 LLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
LL SSL+ +A+ K K + W +T G F+ +EIYEF + S
Sbjct: 77 LLTSSLTSVYAIYH--MKNFDFKKMQLWFGITVLLGAGFLGLEIYEFNEYVHEGHKFTTS 134
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
AF S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+
Sbjct: 135 AFASAFYTLVGTHGSHVAFGLLWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWVF 194
Query: 200 VFSFVYLMGVV 210
+F+ VYLMG+V
Sbjct: 195 IFTVVYLMGMV 205
>gi|251799268|ref|YP_003013999.1| cytochrome-c oxidase [Paenibacillus sp. JDR-2]
gi|247546894|gb|ACT03913.1| Cytochrome-c oxidase [Paenibacillus sp. JDR-2]
Length = 205
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ LGFW++L ++ ++F F + L GP ++F++ + ++T
Sbjct: 14 EPEKATLEGRNKILGFWLFLGAETVLFGTLFSAFLALRDQVLDGPKSQELFELPLVALAT 73
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
+LL SSL+ FA A ++ + V WL+VT G+ F+ +EIYEF++ +
Sbjct: 74 GLLLTSSLTSVFATQALHQQK-VKAMVWWLVVTVILGLGFLGLEIYEFSNYVHEGHGFTT 132
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF SSF+ LVG HG HV FG++W+ +L+ Q+LKKGL + ++WHF+D++W+
Sbjct: 133 SAFSSSFYTLVGFHGAHVAFGIVWISLLIGQLLKKGLTVTTAPKAYVAGIYWHFIDVVWV 192
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG V
Sbjct: 193 FIFTVVYLMGKV 204
>gi|228989832|ref|ZP_04149812.1| Quinol oxidase subunit 3 [Bacillus pseudomycoides DSM 12442]
gi|228996023|ref|ZP_04155678.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock3-17]
gi|229003639|ref|ZP_04161454.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock1-4]
gi|228757605|gb|EEM06835.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock1-4]
gi|228763719|gb|EEM12611.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock3-17]
gi|228769979|gb|EEM18562.1| Quinol oxidase subunit 3 [Bacillus pseudomycoides DSM 12442]
Length = 200
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 107/179 (59%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A
Sbjct: 22 LGFWIFLGAEIVLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIA 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ K + W + T G F+ E+ EF ++ A Q S FLS FF L+G
Sbjct: 82 -IHEMRKHNQKAMLGWFIFTLILGAGFLFFEVEEFMAYVAEGATIQTSGFLSGFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW +VIQILK+GL R++ +S++WHFLD++WI +++ VYL G+V
Sbjct: 141 HGAHVTAGIIWATCVVIQILKRGLTPVTARKVFIISLYWHFLDVVWIFIYTLVYLNGMV 199
>gi|228474321|ref|ZP_04059056.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus hominis
SK119]
gi|314936750|ref|ZP_07844097.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus hominis
subsp. hominis C80]
gi|228271680|gb|EEK13027.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus hominis
SK119]
gi|313655369|gb|EFS19114.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus hominis
subsp. hominis C80]
Length = 201
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 6/189 (3%)
Query: 26 DHDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVL 81
H+G LGFWI+L ++ +F F T L G +Y G ++F++ + + T L
Sbjct: 12 THEGQLNKLGFWIFLTAEFALFGTLFATLLTLQHGGSYG-GKMTTELFELPLVLIMTFAL 70
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
L+SS +C A + K K + W+++T G+IF+ EIYEFAH S P+ ++
Sbjct: 71 LISSYTCGIA-IYYLRKEEKGKMMFWMILTVILGLIFVGFEIYEFAHYASEGVTPKVGSY 129
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
SSFF L+G HG HV G++W+ L+IQ+ +GL N +L +S++WHFLD++WI +F
Sbjct: 130 WSSFFILLGTHGAHVSLGIVWIICLLIQVATRGLNKFNAPKLFIVSLYWHFLDVVWIFIF 189
Query: 202 SFVYLMGVV 210
+ VY++G+V
Sbjct: 190 TAVYMIGMV 198
>gi|149181710|ref|ZP_01860202.1| CtaE [Bacillus sp. SG-1]
gi|148850558|gb|EDL64716.1| CtaE [Bacillus sp. SG-1]
Length = 209
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 10/197 (5%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP-----IDVFDISGI 74
+++ ++ +LGFW +L + ++F F TY L + P+P D+FD+
Sbjct: 16 PEKATLEAKNKFLGFWFFLGGETVLFGSLFATYLALKDSV---PSPDHALAKDIFDLPLA 72
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SME 133
F++T++LL SSL+ +AM +WLL+T G F+ +EIYEF H +
Sbjct: 73 FIATMLLLTSSLTSVYAMYHMKNYNF-KNMQAWLLITVLLGAAFLALEIYEFNHYVHEYH 131
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
SAF S+F+ LVG HG HV FGL+W+ L+++ K+GL N + S++WHF+
Sbjct: 132 HTFTSSAFGSAFYTLVGFHGAHVAFGLLWIISLMVRNAKRGLSLYNAPKFYVASLYWHFI 191
Query: 194 DLIWICVFSFVYLMGVV 210
D++W+ +F+ VYLMG+V
Sbjct: 192 DVVWVFIFTVVYLMGMV 208
>gi|138894619|ref|YP_001125072.1| cytochrome caa3-type oxidase III [Geobacillus thermodenitrificans
NG80-2]
gi|196247772|ref|ZP_03146474.1| cytochrome c oxidase subunit III [Geobacillus sp. G11MC16]
gi|1841879|dbj|BAA11113.1| cytochrome c oxidase subunit III [Geobacillus stearothermophilus]
gi|134266132|gb|ABO66327.1| Cytochrome caa3-type oxidase III [Geobacillus thermodenitrificans
NG80-2]
gi|196212556|gb|EDY07313.1| cytochrome c oxidase subunit III [Geobacillus sp. G11MC16]
Length = 206
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV 80
+ + ++ +LGFW++L + ++FA F TY L GP+ ++F + +F++T++
Sbjct: 17 ERATLEGKNKFLGFWLFLGGETVLFASLFATYLALKDKTNGGPSGEELFQMPIVFMATML 76
Query: 81 LLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
LL SSL+ +A+ K W +T G F+ +EIYEF + SA
Sbjct: 77 LLTSSLTSVYAIYHMKNFDF-QKMQLWFGITVLLGAGFLALEIYEFYEYVHEGHKFTSSA 135
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
F S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +
Sbjct: 136 FGSAFYTLVGTHGAHVAFGLLWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWVFI 195
Query: 201 FSFVYLMGVV 210
F+ VYLMG+V
Sbjct: 196 FTVVYLMGMV 205
>gi|330684196|gb|EGG95940.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis VCU121]
Length = 201
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 115/188 (61%), Gaps = 6/188 (3%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI+L ++ +F F T L G +YA G ++F++ + + T LL
Sbjct: 13 HEGELNKLGFWIFLTAEFALFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFALL 71
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
LSS +C A+ ++ + + W+++T G++F+ EIYEFAH + P +F
Sbjct: 72 LSSYTCGIAIYYMRKEKQ-NLMMFWMILTVLLGLVFVGFEIYEFAHYATEGVNPTIGSFW 130
Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
SSFF L+G HG HV G++W+ L+IQI +GL S N +L +S++WHFLD++WI +F+
Sbjct: 131 SSFFILLGTHGCHVSVGIVWIICLLIQIGTRGLDSYNAPKLFIVSLYWHFLDVVWIFIFT 190
Query: 203 FVYLMGVV 210
VY++G+V
Sbjct: 191 AVYMIGMV 198
>gi|27467675|ref|NP_764312.1| quinol oxidase polypeptide III QoxC [Staphylococcus epidermidis
ATCC 12228]
gi|57866536|ref|YP_188229.1| quinol oxidase, subunit III [Staphylococcus epidermidis RP62A]
gi|242242363|ref|ZP_04796808.1| cytochrome-c oxidase [Staphylococcus epidermidis W23144]
gi|251810512|ref|ZP_04824985.1| cytochrome-c oxidase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876583|ref|ZP_06285448.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis SK135]
gi|293366953|ref|ZP_06613628.1| quinol oxidase subunit III [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675019|sp|Q5HQB1|QOX3_STAEQ RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|81842948|sp|Q8CPP8|QOX3_STAES RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|27315219|gb|AAO04354.1|AE016746_144 quinol oxidase polypeptide III QoxC [Staphylococcus epidermidis
ATCC 12228]
gi|57637194|gb|AAW53982.1| quinol oxidase, subunit III [Staphylococcus epidermidis RP62A]
gi|242234170|gb|EES36482.1| cytochrome-c oxidase [Staphylococcus epidermidis W23144]
gi|251805923|gb|EES58580.1| cytochrome-c oxidase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294671|gb|EFA87200.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis SK135]
gi|291318928|gb|EFE59299.1| quinol oxidase subunit III [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319401614|gb|EFV89824.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis FRI909]
gi|329732867|gb|EGG69213.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis VCU144]
gi|329734253|gb|EGG70569.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis VCU028]
gi|329735503|gb|EGG71791.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus
epidermidis VCU045]
Length = 201
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 6/188 (3%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI+L ++ +F F T L G Y G D+F++ I + T LL
Sbjct: 13 HEGELNKLGFWIFLTAEFALFGTLFATLLTLQHGGGYG-GKLTTDLFELHLILIMTFALL 71
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
+SS +C A+ ++ + + W+++T G++F+ EIYEFAH S P +F
Sbjct: 72 ISSYTCGIAIYYMRQEKQ-NLMMFWMIITVILGLVFVGFEIYEFAHYASEGVNPTIGSFW 130
Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
SSFF L+G HG HV G++W+ L+IQI +GL S N +L +S++WHFLD++W+ +F+
Sbjct: 131 SSFFILLGTHGAHVSLGIVWVICLLIQIGTRGLDSYNAPKLFIVSLYWHFLDVVWVFIFT 190
Query: 203 FVYLMGVV 210
VY++G+V
Sbjct: 191 AVYMIGMV 198
>gi|239826488|ref|YP_002949112.1| cytochrome C oxidase subunit III [Geobacillus sp. WCH70]
gi|239806781|gb|ACS23846.1| cytochrome c oxidase subunit III [Geobacillus sp. WCH70]
Length = 206
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ + ++ +LG W++L + ++FA F T+ L A GP ++F + +FV+T
Sbjct: 15 SPERATIEGKNKFLGLWVFLGGETVLFASLFGTFIALRDKTAGGPTSQELFHLPLVFVAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL SSL+ +A+ K + W +T G+ F+ +EIYEF +
Sbjct: 75 MLLLTSSLTSVYAIYHMKNFDF-KKMMLWFGITVLLGLCFLGLEIYEFYEYVHKGLKFST 133
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+F+ LVGLHG HV FGL W+ L+I+ K+GL N + S++WHF+D++W+
Sbjct: 134 SAFSSAFYTLVGLHGSHVAFGLSWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWV 193
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG+V
Sbjct: 194 FIFTVVYLMGMV 205
>gi|70726904|ref|YP_253818.1| quinol oxidase polypeptide III [Staphylococcus haemolyticus
JCSC1435]
gi|123659873|sp|Q4L563|QOX3_STAHJ RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|68447628|dbj|BAE05212.1| quinol oxidase polypeptide III [Staphylococcus haemolyticus
JCSC1435]
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 115/188 (61%), Gaps = 6/188 (3%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI+L ++ +F F T L G +YA G ++F++ + + T LL
Sbjct: 13 HEGQLNKLGFWIFLTAEFSLFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFALL 71
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
+SS +C ++ ++ + + W+++T G++F+ EIYEFAH +S PQ ++
Sbjct: 72 ISSYTCGISIYYMRKEKQ-NLMMFWMILTVLLGLVFVGFEIYEFAHYVSEGVTPQIGSYW 130
Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
SSFF L+G HG HV G+ W+ L+IQ+ +GL N +L +S++WHFLD++WI +F+
Sbjct: 131 SSFFILLGTHGAHVSLGIGWIICLLIQVATRGLNKYNAPKLFIVSLYWHFLDVVWIFIFT 190
Query: 203 FVYLMGVV 210
VY++G+V
Sbjct: 191 AVYMIGMV 198
>gi|152974415|ref|YP_001373932.1| cytochrome aa3 quinol oxidase subunit III [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152023167|gb|ABS20937.1| Cytochrome aa3 quinol oxidase subunit III [Bacillus cytotoxicus NVH
391-98]
Length = 200
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A
Sbjct: 22 LGFWIFLGAEIVLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIA 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + + W + T G F+ EI EF + A Q S FLS FF L+G
Sbjct: 82 -IHEMRRHNKNAMLGWFIFTLLLGAGFLFFEIEEFMTYAAEGATIQTSGFLSGFFVLLGT 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV G+IW ++IQILK+GL R++ +S++WHFLD++WI +++ VYL G+V
Sbjct: 141 HGAHVTAGIIWAICVIIQILKRGLTPITARKVFIISLYWHFLDVVWIFIYTLVYLNGMV 199
>gi|89099673|ref|ZP_01172547.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. NRRL
B-14911]
gi|89085616|gb|EAR64743.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. NRRL
B-14911]
Length = 198
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Query: 23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82
S ++ LGFWI+L ++ ++FA F Y L +GP+ ++F+IS + + T VLL
Sbjct: 12 STEENKTKILGFWIFLGAEIMLFATLFAGYFTLVDRTGSGPSAGEIFEISPVLIETFVLL 71
Query: 83 LSSLSCSFAMLASATKRLIHKT--VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
SS + A+ A RL +K +++ +T G+ F+ +EIYEF H + + A Q SA
Sbjct: 72 TSSFTIGLAIHA---MRLGNKKAMLAFFGITILLGLGFLSVEIYEFIHYVHIGAGLQTSA 128
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
F + +G HGLHV FG+ W +++Q+ K+GL + S++WHFLD++WI +
Sbjct: 129 FTAILLTTLGTHGLHVTFGIFWGLAIMLQVKKRGLNPHTANKSFIFSLYWHFLDVVWIFI 188
Query: 201 FSFVYLMGVV 210
FSF+YL G++
Sbjct: 189 FSFIYLKGLM 198
>gi|319892053|ref|YP_004148928.1| quinol oxidase polypeptide III QoxC [Staphylococcus
pseudintermedius HKU10-03]
gi|317161749|gb|ADV05292.1| quinol oxidase polypeptide III QoxC [Staphylococcus
pseudintermedius HKU10-03]
gi|323464838|gb|ADX76991.1| quinol oxidase subunit III [Staphylococcus pseudintermedius ED99]
Length = 202
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 121/203 (59%), Gaps = 13/203 (6%)
Query: 17 VKDKKESCVD---HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVF 69
+ K + +D H+G LGFWI+L ++ +F F T L G +Y G D+F
Sbjct: 1 MSHKNVNTIDARTHEGDLNKLGFWIFLTAEFALFGTLFATLLTLQHGGSYG-GMLTTDLF 59
Query: 70 DISGIFVSTIVLLLSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
++ + + T +LL SS +C A+ + K+L+ + W+++T G+ F+ EI+EF+
Sbjct: 60 ELPLVLIMTFLLLASSYTCGIAIYYMRKENKQLL---LIWMIITIILGIGFVGFEIFEFS 116
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187
H + A PQ +++ SSFF L+G HG HV G+ W+ L+IQ+ +GL N +L +S
Sbjct: 117 HYVHEGATPQLASYWSSFFILLGTHGAHVTVGIFWIICLLIQVATRGLTKYNAPKLFIVS 176
Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210
++WHFLD++WI +F+ VY++G+V
Sbjct: 177 LYWHFLDVVWIFIFTAVYMIGMV 199
>gi|289829173|ref|ZP_06546815.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
Length = 156
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A K + +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG H
Sbjct: 88 IA-MHKNNKSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTH 146
Query: 153 GLHVFFGLIW 162
GLHV GLIW
Sbjct: 147 GLHVTSGLIW 156
>gi|29654348|ref|NP_820040.1| cytochrome c oxidase polypeptide III [Coxiella burnetii RSA 493]
gi|153206716|ref|ZP_01945557.1| cytochrome o ubiquinol oxidase, subunit III [Coxiella burnetii 'MSU
Goat Q177']
gi|154706160|ref|YP_001424382.1| cytochrome c oxidase polypeptide III [Coxiella burnetii Dugway
5J108-111]
gi|161830988|ref|YP_001596690.1| cytochrome o ubiquinol oxidase, subunit III [Coxiella burnetii RSA
331]
gi|165924174|ref|ZP_02220006.1| cytochrome o ubiquinol oxidase, subunit III [Coxiella burnetii RSA
334]
gi|212212543|ref|YP_002303479.1| cytochrome O ubiquinol oxidase subunit III [Coxiella burnetii
CbuG_Q212]
gi|212218406|ref|YP_002305193.1| cytochrome O ubiquinol oxidase subunit III [Coxiella burnetii
CbuK_Q154]
gi|29541615|gb|AAO90554.1| cytochrome c oxidase polypeptide III [Coxiella burnetii RSA 493]
gi|120577079|gb|EAX33703.1| cytochrome o ubiquinol oxidase, subunit III [Coxiella burnetii 'MSU
Goat Q177']
gi|154355446|gb|ABS76908.1| cytochrome c oxidase polypeptide III [Coxiella burnetii Dugway
5J108-111]
gi|161762855|gb|ABX78497.1| cytochrome o ubiquinol oxidase, subunit III [Coxiella burnetii RSA
331]
gi|165916378|gb|EDR34982.1| cytochrome o ubiquinol oxidase, subunit III [Coxiella burnetii RSA
334]
gi|212010953|gb|ACJ18334.1| cytochrome O ubiquinol oxidase subunit III [Coxiella burnetii
CbuG_Q212]
gi|212012668|gb|ACJ20048.1| cytochrome O ubiquinol oxidase subunit III [Coxiella burnetii
CbuK_Q154]
Length = 198
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 108/192 (56%), Gaps = 2/192 (1%)
Query: 20 KKESCVDHDGT-YLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
E + D T GFW+Y+M+DC++FA F T+ VL A GP + D+ + V T
Sbjct: 7 AAEHHHNADATDVFGFWLYIMTDCILFASLFATFLVLHHPGAVGPPLKPLIDLPYVLVET 66
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
LL S+ + A+ +L + WL++T G F++ME+ EF HL +
Sbjct: 67 FFLLASNFTFCLAIFGINKNKL-PAVIFWLILTFILGAGFVVMEVMEFIHLNAEGYSWHV 125
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
S S+FF LVG HG HV GL+W+ +++IQ+ + RR++ L +FW+FLD++WI
Sbjct: 126 SGAASAFFTLVGTHGFHVTMGLLWILIMIIQLPILKINKNTARRMVYLGLFWNFLDIVWI 185
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG V
Sbjct: 186 FLFTIVYLMGAV 197
>gi|323488486|ref|ZP_08093731.1| cytochrome c oxidase, subunit III [Planococcus donghaensis MPA1U2]
gi|323397854|gb|EGA90655.1| cytochrome c oxidase, subunit III [Planococcus donghaensis MPA1U2]
Length = 208
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 19/207 (9%)
Query: 18 KDKKESCVDHDGT--------YLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID-- 67
K +S DH T ++GFW+ L ++ + FA F TY L GP+ ++
Sbjct: 6 KYTPQSWPDHPETATLEGKNKFVGFWLLLAAETVTFASLFATYLALKDK---GPSGMEFS 62
Query: 68 ---VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTV-SWLLVTAFFGMIFIIMEI 123
+F++ +F T++LL SSL+ +AM K K + +WL +T G+ F+ +EI
Sbjct: 63 AAGLFELPLVFAMTMILLTSSLTSVYAM--HHMKNYNFKAMQAWLAITVLLGLTFLGLEI 120
Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
YEF H + + SAF S+FF LVG HG HV FGL W L+++ K+GL N +
Sbjct: 121 YEFNHYVHIGFGYTNSAFSSAFFTLVGTHGAHVLFGLSWFIALMLRNAKRGLNMYNAPKF 180
Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210
S++WHF+D++W+ +F+ VYLMGV+
Sbjct: 181 YLASLYWHFIDVVWVFIFTVVYLMGVI 207
>gi|16080866|ref|NP_391694.1| cytochrome aa3-600 quinol oxidase subunit III [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311780|ref|ZP_03593627.1| cytochrome aa3 quinol oxidase (subunit III) [Bacillus subtilis
subsp. subtilis str. 168]
gi|221316105|ref|ZP_03597910.1| cytochrome aa3 quinol oxidase (subunit III) [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221321018|ref|ZP_03602312.1| cytochrome aa3 quinol oxidase (subunit III) [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221325302|ref|ZP_03606596.1| cytochrome aa3 quinol oxidase (subunit III) [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313372|ref|YP_004205659.1| cytochrome aa3-600 quinol oxidase subunit III [Bacillus subtilis
BSn5]
gi|464514|sp|P34958|QOX3_BACSU RecName: Full=Quinol oxidase subunit 3; AltName: Full=Oxidase
aa(3)-600 subunit 3; AltName: Full=Quinol oxidase
aa3-600, subunit QoxC; AltName: Full=Quinol oxidase
polypeptide III
gi|143398|gb|AAA22688.1| quinol oxidase [Bacillus subtilis]
gi|413963|emb|CAA51595.1| ipa-39d qoxC [Bacillus subtilis subsp. subtilis str. 168]
gi|2636350|emb|CAB15841.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus subtilis
subsp. subtilis str. 168]
gi|291486406|dbj|BAI87481.1| cytochrome aa3 quinol oxidase subunit III [Bacillus subtilis subsp.
natto BEST195]
gi|320019646|gb|ADV94632.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus subtilis
BSn5]
Length = 204
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL A G P ++F+++ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATFFVLKNRTAGGVLPDELFEVNLVMIMTFLLLISSFTCGIA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + V W ++T G F+ EI EF H + A SAF S FF L+G
Sbjct: 85 -VHEMRRGSLKGVVIWTIITLLLGAGFVGCEINEFVHYVHEGAALSTSAFWSGFFVLLGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HG HV G+ W+ ++IQ+ K+GL ++ S++WHFLD++WI +F+ VYLMG+
Sbjct: 144 HGTHVTIGIFWITGILIQLKKRGLTPQTSSKIFISSLYWHFLDVVWIFIFTGVYLMGL 201
>gi|56963900|ref|YP_175631.1| cytochrome aa3 quinol oxidase subunit III QoxC [Bacillus clausii
KSM-K16]
gi|56910143|dbj|BAD64670.1| cytochrome aa3 quinol oxidase subunit III QoxC [Bacillus clausii
KSM-K16]
Length = 204
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 7/201 (3%)
Query: 9 SPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
+PN L Y + + + LGFWI+L ++ +FA F +Y VL A ++
Sbjct: 8 NPNEPLEYQSAEGRNNI------LGFWIFLGAEFALFATLFASYFVLVDRNAGAVPSAEL 61
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
FD++ + + T +LL SS +C A+ R+ ++T+ W+ +T G+ F+ EIYEF H
Sbjct: 62 FDLNLVLIMTFLLLTSSFTCGIAIHEMRAGRM-NQTLVWIGLTLLLGLGFVGFEIYEFIH 120
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
+ A SA S+FF L+G HGLHV G+ W+ +L IQ+LK+G + S+
Sbjct: 121 YVHEGATLSASAHWSTFFVLLGTHGLHVSIGIGWIVLLAIQMLKRGFTPRTTSKFFIASL 180
Query: 189 FWHFLDLIWICVFSFVYLMGV 209
+WHFLD++WI +F+ VYL+G+
Sbjct: 181 YWHFLDVVWIMIFTGVYLLGM 201
>gi|299820827|ref|ZP_07052716.1| quinol oxidase subunit III [Listeria grayi DSM 20601]
gi|299817848|gb|EFI85083.1| quinol oxidase subunit III [Listeria grayi DSM 20601]
Length = 202
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + K+ + L Y ++ + +GFW +L ++ +FA F TY V+ K AG
Sbjct: 2 ESVKKNDDRPLEYQSEQGSLNI------IGFWTFLTAEIALFATLFATYFVMEKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + V T +LL SS +C A + K + V ++++T G F+ E
Sbjct: 56 HPPSEMFELWLVLVMTFLLLTSSFTCGLA-IGEMRKGNVKMLVVYMIITLLLGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182
IYEF+H + Q ++ SSFF L+G HGLHV GL W+ ++IQ LK+GL N +
Sbjct: 115 IYEFSHYVMEGVTMQVGSYWSSFFVLLGTHGLHVTIGLFWITFILIQ-LKRGLTPKNASK 173
Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210
L S++WHFLD++WI +F+ VYL G+V
Sbjct: 174 LFITSLYWHFLDVVWIFIFTGVYLYGMV 201
>gi|194016425|ref|ZP_03055039.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus pumilus ATCC
7061]
gi|194011898|gb|EDW21466.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus pumilus ATCC
7061]
Length = 205
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 109/181 (60%), Gaps = 7/181 (3%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F TY VL A G P ++FD+ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATYFVLHGRTAGGVLPAELFDMKLVLIMTFLLLVSSFTCGIA 84
Query: 92 ---MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
M +TK + V W ++T G F+ EI+EF H + A SA+ S+FF L
Sbjct: 85 VHEMRRGSTKGV----VIWTILTLLLGAGFVGFEIFEFFHYVHEGASIHTSAYWSAFFVL 140
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
+G HGLHV G+ W+ ++ QI K+GL ++ S++WHFLD++WI +F+ VYL+G
Sbjct: 141 LGTHGLHVSIGIFWITGVLFQIKKRGLTPQTASKIFISSLYWHFLDVVWIFIFTAVYLIG 200
Query: 209 V 209
+
Sbjct: 201 L 201
>gi|258423560|ref|ZP_05686450.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9635]
gi|282916310|ref|ZP_06324072.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus D139]
gi|283770122|ref|ZP_06343014.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus H19]
gi|257846261|gb|EEV70285.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9635]
gi|282319750|gb|EFB50098.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus D139]
gi|283460269|gb|EFC07359.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus H19]
Length = 201
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 10/190 (5%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI++ ++ +F F T L G +YA G ++F++ + + T LL
Sbjct: 13 HEGELNKLGFWIFITAEFALFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFALL 71
Query: 83 LSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
SS +C A+ + ++L+ + W+++T G++F+ EIYEFAH S P +
Sbjct: 72 FSSYTCGIAIYYMRQEKQKLM---MFWMIITLLLGLVFVGFEIYEFAHYASEGVNPTIGS 128
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
+ SSFF L+G HG HV G++W L+IQI ++GL N +L +S++WHFLD++W+ +
Sbjct: 129 YWSSFFILLGTHGCHVTLGIVWAICLLIQIQRRGLDKYNAPKLFIVSLYWHFLDVVWVFI 188
Query: 201 FSFVYLMGVV 210
F+ VY++G+V
Sbjct: 189 FTAVYMIGMV 198
>gi|15924049|ref|NP_371583.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926645|ref|NP_374178.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus N315]
gi|21282671|ref|NP_645759.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus MW2]
gi|49483223|ref|YP_040447.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485898|ref|YP_043119.1| putative quinol oxidase polypeptide III [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650252|ref|YP_185932.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
COL]
gi|82750669|ref|YP_416410.1| quinol oxidase polypeptide III [Staphylococcus aureus RF122]
gi|87161041|ref|YP_493659.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194756|ref|YP_499552.1| cytochrome c oxidase subunit III [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267551|ref|YP_001246494.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus JH9]
gi|150393607|ref|YP_001316282.1| cytochrome aa3 quinol oxidase subunit III [Staphylococcus aureus
subsp. aureus JH1]
gi|151221140|ref|YP_001331962.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979382|ref|YP_001441641.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509243|ref|YP_001574902.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141968|ref|ZP_03566461.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316216|ref|ZP_04839429.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253731667|ref|ZP_04865832.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732578|ref|ZP_04866743.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005846|ref|ZP_05144447.2| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425113|ref|ZP_05601539.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427776|ref|ZP_05604174.1| CyoC protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430410|ref|ZP_05606792.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433113|ref|ZP_05609471.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus E1410]
gi|257436011|ref|ZP_05612058.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus M876]
gi|257795209|ref|ZP_05644188.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9781]
gi|258407082|ref|ZP_05680231.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus A9763]
gi|258421826|ref|ZP_05684747.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9719]
gi|258435224|ref|ZP_05688963.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443321|ref|ZP_05691664.1| quinol oxidase [Staphylococcus aureus A8115]
gi|258446916|ref|ZP_05695069.1| quinol oxidase [Staphylococcus aureus A6300]
gi|258449894|ref|ZP_05697992.1| cytochrome aa3 quinol oxidase subunit III [Staphylococcus aureus
A6224]
gi|258451992|ref|ZP_05700008.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus A5948]
gi|258454992|ref|ZP_05702955.1| quinol oxidase polypeptide III [Staphylococcus aureus A5937]
gi|262049397|ref|ZP_06022270.1| Quinol oxidase polypeptide III QoxC [Staphylococcus aureus D30]
gi|262052835|ref|ZP_06025021.1| Quinol oxidase polypeptide III QoxC [Staphylococcus aureus
930918-3]
gi|269202670|ref|YP_003281939.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
ED98]
gi|282894084|ref|ZP_06302315.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A8117]
gi|282903608|ref|ZP_06311496.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus C160]
gi|282905378|ref|ZP_06313233.1| cytochrome aa3 quinol oxidase subunit III [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908350|ref|ZP_06316181.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282910637|ref|ZP_06318440.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282913834|ref|ZP_06321621.1| quinol oxidase, subunit 3 [Staphylococcus aureus subsp. aureus
M899]
gi|282918759|ref|ZP_06326494.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus C427]
gi|282923881|ref|ZP_06331557.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus C101]
gi|282925071|ref|ZP_06332732.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9765]
gi|282927280|ref|ZP_06334902.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A10102]
gi|283957805|ref|ZP_06375256.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus A017934/97]
gi|284023985|ref|ZP_06378383.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
132]
gi|293500872|ref|ZP_06666723.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus 58-424]
gi|293509828|ref|ZP_06668537.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus M809]
gi|293526414|ref|ZP_06671099.1| quinol oxidase, subunit 3 [Staphylococcus aureus subsp. aureus
M1015]
gi|294848046|ref|ZP_06788793.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A9754]
gi|295405863|ref|ZP_06815672.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8819]
gi|295427548|ref|ZP_06820180.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296277097|ref|ZP_06859604.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
MR1]
gi|297208307|ref|ZP_06924737.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245454|ref|ZP_06929325.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8796]
gi|297591501|ref|ZP_06950139.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
MN8]
gi|300912383|ref|ZP_07129826.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381386|ref|ZP_07364038.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|81694781|sp|Q5HH25|QOX3_STAAC RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|81696347|sp|Q6GAF4|QOX3_STAAS RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|81696509|sp|Q6GI25|QOX3_STAAR RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|81704531|sp|Q7A183|QOX3_STAAW RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|81705892|sp|Q7A6A0|QOX3_STAAN RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|81781805|sp|Q99V38|QOX3_STAAM RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|122539830|sp|Q2FZK1|QOX3_STAA8 RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|123486460|sp|Q2FI19|QOX3_STAA3 RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|123548915|sp|Q2YX16|QOX3_STAAB RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|13700860|dbj|BAB42156.1| Quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus N315]
gi|14246829|dbj|BAB57221.1| Quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
Mu50]
gi|21204109|dbj|BAB94807.1| Quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus MW2]
gi|49241352|emb|CAG40036.1| putative quinol oxidase polypeptide III [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49244341|emb|CAG42769.1| putative quinol oxidase polypeptide III [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57284438|gb|AAW36532.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
COL]
gi|82656200|emb|CAI80613.1| quinol oxidase polypeptide III [Staphylococcus aureus RF122]
gi|87127015|gb|ABD21529.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202314|gb|ABD30124.1| cytochrome c oxidase subunit III, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|147740620|gb|ABQ48918.1| Cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus JH9]
gi|149946059|gb|ABR51995.1| Cytochrome aa3 quinol oxidase subunit III [Staphylococcus aureus
subsp. aureus JH1]
gi|150373940|dbj|BAF67200.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721517|dbj|BAF77934.1| Quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368052|gb|ABX29023.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724666|gb|EES93395.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729356|gb|EES98085.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272089|gb|EEV04221.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274617|gb|EEV06104.1| CyoC protein [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278538|gb|EEV09157.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281206|gb|EEV11343.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus subsp.
aureus E1410]
gi|257284293|gb|EEV14413.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus M876]
gi|257789181|gb|EEV27521.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9781]
gi|257841237|gb|EEV65682.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus A9763]
gi|257842159|gb|EEV66587.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9719]
gi|257848885|gb|EEV72868.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851411|gb|EEV75350.1| quinol oxidase [Staphylococcus aureus A8115]
gi|257854248|gb|EEV77198.1| quinol oxidase [Staphylococcus aureus A6300]
gi|257856814|gb|EEV79717.1| cytochrome aa3 quinol oxidase subunit III [Staphylococcus aureus
A6224]
gi|257860207|gb|EEV83039.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus A5948]
gi|257862872|gb|EEV85637.1| quinol oxidase polypeptide III [Staphylococcus aureus A5937]
gi|259159283|gb|EEW44341.1| Quinol oxidase polypeptide III QoxC [Staphylococcus aureus
930918-3]
gi|259162506|gb|EEW47075.1| Quinol oxidase polypeptide III QoxC [Staphylococcus aureus D30]
gi|262074960|gb|ACY10933.1| quinol oxidase, subunit III [Staphylococcus aureus subsp. aureus
ED98]
gi|269940555|emb|CBI48934.1| putative quinol oxidase polypeptide III [Staphylococcus aureus
subsp. aureus TW20]
gi|282313853|gb|EFB44245.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus C101]
gi|282316569|gb|EFB46943.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus C427]
gi|282321902|gb|EFB52226.1| quinol oxidase, subunit 3 [Staphylococcus aureus subsp. aureus
M899]
gi|282325242|gb|EFB55551.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282328015|gb|EFB58297.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330670|gb|EFB60184.1| cytochrome aa3 quinol oxidase subunit III [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282590969|gb|EFB96044.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A10102]
gi|282592669|gb|EFB97677.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A9765]
gi|282595226|gb|EFC00190.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus C160]
gi|282763570|gb|EFC03699.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
A8117]
gi|283470270|emb|CAQ49481.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus ST398]
gi|283789954|gb|EFC28771.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus A017934/97]
gi|285816737|gb|ADC37224.1| quinol oxidase polypeptide III QoxC [Staphylococcus aureus
04-02981]
gi|290920486|gb|EFD97549.1| quinol oxidase, subunit 3 [Staphylococcus aureus subsp. aureus
M1015]
gi|291095877|gb|EFE26138.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus 58-424]
gi|291467278|gb|EFF09795.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus M809]
gi|294824846|gb|EFG41268.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A9754]
gi|294969298|gb|EFG45318.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8819]
gi|295127906|gb|EFG57540.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887046|gb|EFH25949.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177757|gb|EFH37007.1| cytochrome aa3 quinol oxidase [Staphylococcus aureus A8796]
gi|297576387|gb|EFH95103.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
MN8]
gi|298694296|gb|ADI97518.1| quinol oxidase polypeptide III [Staphylococcus aureus subsp. aureus
ED133]
gi|300886629|gb|EFK81831.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332669|gb|ADL22862.1| Cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus JKD6159]
gi|302750884|gb|ADL65061.1| Cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340061|gb|EFM06003.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312829453|emb|CBX34295.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315130357|gb|EFT86344.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193727|gb|EFU24122.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
CGS00]
gi|315197480|gb|EFU27816.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141125|gb|EFW32972.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320143182|gb|EFW34972.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus MRSA177]
gi|323438882|gb|EGA96618.1| quinol oxidase polypeptide III [Staphylococcus aureus O11]
gi|323441727|gb|EGA99371.1| quinol oxidase polypeptide III [Staphylococcus aureus O46]
gi|329313728|gb|AEB88141.1| Probable quinol oxidase subunit 3 [Staphylococcus aureus subsp.
aureus T0131]
gi|329727944|gb|EGG64392.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus 21189]
gi|329728220|gb|EGG64659.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus 21172]
gi|329729071|gb|EGG65483.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus aureus
subsp. aureus 21193]
Length = 201
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 10/190 (5%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI++ ++ +F F T L G +YA G ++F++ + + T LL
Sbjct: 13 HEGELNKLGFWIFITAEFALFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFALL 71
Query: 83 LSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
SS +C A+ + ++L+ + W+++T G++F+ EIYEFAH S P +
Sbjct: 72 FSSYTCGIAIYYMRQEKQKLM---MFWMIITLLLGLVFVGFEIYEFAHYASEGVNPTIGS 128
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
+ SSFF L+G HG HV G++W L+IQI ++GL N +L +S++WHFLD++W+ +
Sbjct: 129 YWSSFFILLGTHGCHVSLGIVWAICLLIQIQRRGLDKYNAPKLFIVSLYWHFLDVVWVFI 188
Query: 201 FSFVYLMGVV 210
F+ VY++G+V
Sbjct: 189 FTAVYMIGMV 198
>gi|296331457|ref|ZP_06873929.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676444|ref|YP_003868116.1| cytochrome aa3-600 quinol oxidase subunit III [Bacillus subtilis
subsp. spizizenii str. W23]
gi|317411864|sp|E0TW65|QOX3_BACPZ RecName: Full=Quinol oxidase subunit 3; AltName: Full=Oxidase
aa(3)-600 subunit 3; AltName: Full=Quinol oxidase
aa3-600, subunit qoxC; AltName: Full=Quinol oxidase
polypeptide III
gi|296151572|gb|EFG92449.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414688|gb|ADM39807.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 204
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL A G P ++F+++ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATFFVLQNRTAGGVLPDELFEVNLVMIMTFLLLISSFTCGIA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + V W ++T G F+ EI EF H + A SAF S FF L+G
Sbjct: 85 -VHEMRRGSLKGVVIWTIITLLLGAGFVGCEINEFVHYVHEGASLGTSAFWSGFFVLLGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HG HV G+ W+ ++IQ+ K+GL ++ S++WHFLD++WI +F+ VYLMG+
Sbjct: 144 HGTHVTIGIFWIIGILIQLKKRGLTPQTSSKIFISSLYWHFLDVVWIFIFTGVYLMGL 201
>gi|332974366|gb|EGK11294.1| cytochrome c oxidase, subunit III [Desmospora sp. 8437]
Length = 207
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ +GFW++L ++ +FA Y L ++ GP ++F + + +ST
Sbjct: 17 EPEKATLEGKNKIVGFWLFLAAESTLFATEMGAYVALKGSHLNGPPSQELFQLPMVALST 76
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL+SSL+ +++ T K ++W +T G F+ +E YEF +
Sbjct: 77 LILLVSSLTSVLGVMSMHTGD-ARKMLTWFGLTVLLGAAFLGLETYEFMEYVHEGHTLTG 135
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF SSF+ L+G HG HV FG++W+ LVIQ KKG+ + S++WHF+D++WI
Sbjct: 136 SAFASSFYLLLGTHGAHVLFGVLWILGLVIQGAKKGITVHTAPKFYLASLYWHFIDVVWI 195
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG++
Sbjct: 196 FIFTVVYLMGMI 207
>gi|242373279|ref|ZP_04818853.1| quinol oxidase polypeptide III [Staphylococcus epidermidis
M23864:W1]
gi|242348989|gb|EES40591.1| quinol oxidase polypeptide III [Staphylococcus epidermidis
M23864:W1]
Length = 201
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 18 KDKKESCVDHDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISG 73
K H+G LGFWI+L ++ +F F T L G +YA ++F++
Sbjct: 4 DTKTIDSRSHEGELNKLGFWIFLTAEFALFGTLFATLLTLQHGGDYAH-KMTTELFELPL 62
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ + T LLLSS +C A+ ++ + + W+++T G++F+ EIYEFAH
Sbjct: 63 VLIMTFSLLLSSYTCGIAIYYMRKEKQ-NLMMIWMIITVLLGLVFVGFEIYEFAHYAQEG 121
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
P +F SSFF L+G HG HV G++W+ L+IQI +GL S N +L +S++WHFL
Sbjct: 122 VNPTIGSFWSSFFILLGTHGCHVSVGIVWIICLLIQIGTRGLDSYNAPKLFIVSLYWHFL 181
Query: 194 DLIWICVFSFVYLMGVV 210
D++WI +F+ VY++G+V
Sbjct: 182 DVVWIFIFTAVYMIGMV 198
>gi|213649242|ref|ZP_03379295.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
Length = 94
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 73/91 (80%)
Query: 118 FIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLIS 177
FI MEIYEF HLI P RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S
Sbjct: 2 FIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTS 61
Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
N+ R++CLS+FWHFLD+IWICVF+ VYLMG
Sbjct: 62 TNRTRIMCLSLFWHFLDVIWICVFTVVYLMG 92
>gi|223043901|ref|ZP_03613943.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus capitis
SK14]
gi|314933255|ref|ZP_07840620.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus caprae
C87]
gi|222442805|gb|EEE48908.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus capitis
SK14]
gi|313653405|gb|EFS17162.1| cytochrome aa3 quinol oxidase, subunit III [Staphylococcus caprae
C87]
Length = 201
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 6/189 (3%)
Query: 26 DHDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVL 81
H+G LGFWI+L ++ +F F T L G +YA ++F++ + + T L
Sbjct: 12 SHEGELNKLGFWIFLTAEFALFGTLFATLLTLQHGGDYAH-KMTTELFELPLVLIMTFSL 70
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
LLSS +C A+ ++ + + W+++T G++F+ EIYEFAH P +F
Sbjct: 71 LLSSYTCGIAIYYMRKEKQ-NLMMIWMIITVLLGLVFVGFEIYEFAHYAQEGVNPTIGSF 129
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
SSFF L+G HG HV G++W+ L+IQI +GL S N +L +S++WHFLD++WI +F
Sbjct: 130 WSSFFILLGTHGCHVSVGIVWIICLLIQIGTRGLDSYNAPKLFIVSLYWHFLDVVWIFIF 189
Query: 202 SFVYLMGVV 210
+ VY++G+V
Sbjct: 190 TAVYMIGMV 198
>gi|157694210|ref|YP_001488672.1| cytochrome aa3 quinol oxidase subunit III [Bacillus pumilus
SAFR-032]
gi|157682968|gb|ABV64112.1| cytochrome aa3 quinol oxidase subunit III [Bacillus pumilus
SAFR-032]
Length = 205
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 109/181 (60%), Gaps = 7/181 (3%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F TY VL A G P ++FD+ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATYFVLHGRTAGGVLPAELFDMKLVLIMTFLLLVSSFTCGIA 84
Query: 92 ---MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
M +TK + V W ++T G F+ E++EF H + A SA+ S+FF L
Sbjct: 85 VHEMRRGSTKGV----VIWTILTLLLGAGFVGFELFEFFHYVHEGASIHTSAYWSAFFVL 140
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
+G HGLHV G+ W+ ++ QI K+GL ++ S++WHFLD++WI +F+ VYL+G
Sbjct: 141 LGTHGLHVSIGIFWITGVLFQIKKRGLTPQTASKIFISSLYWHFLDVVWIFIFTAVYLIG 200
Query: 209 V 209
+
Sbjct: 201 L 201
>gi|321315253|ref|YP_004207540.1| cytochrome c oxidase subunit III [Bacillus subtilis BSn5]
gi|320021527|gb|ADV96513.1| cytochrome c oxidase, subunit III [Bacillus subtilis BSn5]
Length = 207
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 112/193 (58%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
++ ++ +LGFW++L + ++FA F T+ L + A+ P ++FD++ +F++T
Sbjct: 15 SPEKVTLEGKNKFLGFWLFLGGETVLFASLFATFLALRNSNASDPPTTEMFDVTLVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-Q 137
++LL SSL+ +AM K WL +T G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFSF-GKMQLWLGITILLGAGFLGLEIYEFKHYTHEFGFTIT 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SA S+F+ LVG HG HV FGL+W+ L+I+ K+GL + S++WHF+D++W
Sbjct: 134 SSALGSAFYTLVGTHGAHVAFGLMWISTLMIRNAKRGLNLYTAPKFYVASLYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|23099710|ref|NP_693176.1| cytochrome aa3 quinol oxidase subunit III [Oceanobacillus iheyensis
HTE831]
gi|22777940|dbj|BAC14211.1| cytochrome aa3 quinol oxidase subunit III [Oceanobacillus iheyensis
HTE831]
Length = 199
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 113/189 (59%), Gaps = 2/189 (1%)
Query: 23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVL-GKNYAAGPAPIDVFDISGIFVSTIVL 81
S + LGFWI+L ++ ++FA F +Y + G+ +GP+ ++F+I + ++T++L
Sbjct: 12 STEQNKMNILGFWIFLGAEIMLFATLFTSYFIYEGRGVGSGPSSAEIFEIGPVIINTMIL 71
Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
L SS + A+ A +R + +L+VT G F+ +EIYEF H + A Q S F
Sbjct: 72 LTSSFTIGLAIHAMRIQR-TKAMIGFLIVTLVLGAAFVSVEIYEFIHFYHIGATLQTSGF 130
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
++ F + HG HV FGL W +++IQ++K GL + + S++WHFLD++WI +F
Sbjct: 131 TATLFTTLATHGAHVTFGLFWGTMIIIQLVKHGLTAQTANKSFIFSLYWHFLDVMWIFIF 190
Query: 202 SFVYLMGVV 210
SFVYL G++
Sbjct: 191 SFVYLKGMM 199
>gi|16078555|ref|NP_389374.1| cytochrome caa3 oxidase subunit III [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309361|ref|ZP_03591208.1| cytochrome caa3 oxidase (subunit III) [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313688|ref|ZP_03595493.1| cytochrome caa3 oxidase (subunit III) [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318610|ref|ZP_03599904.1| cytochrome caa3 oxidase (subunit III) [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322884|ref|ZP_03604178.1| cytochrome caa3 oxidase (subunit III) [Bacillus subtilis subsp.
subtilis str. SMY]
gi|7404348|sp|P24012|COX3_BACSU RecName: Full=Cytochrome c oxidase subunit 3; AltName:
Full=Caa-3605 subunit 3; AltName: Full=Cytochrome aa3
subunit 3; AltName: Full=Cytochrome c oxidase
polypeptide III; AltName: Full=Oxidase aa(3) subunit 3
gi|2339994|emb|CAB11344.1| cytochrome c oxidase subunit III, aa3 type [Bacillus subtilis
subsp. subtilis str. 168]
gi|2633862|emb|CAB13364.1| cytochrome caa3 oxidase (subunit III) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291484040|dbj|BAI85115.1| cytochrome caa3 oxidase subunit III [Bacillus subtilis subsp. natto
BEST195]
Length = 207
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
++ ++ +LGFW++L + ++FA F T+ L + A P ++FD++ +F++T
Sbjct: 15 SPEKVTLEGKNKFLGFWLFLGGETVLFASLFATFLALRNSNAGDPPTTEMFDVTLVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-Q 137
++LL SSL+ +AM K WL +T G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFSF-GKMQLWLGITILLGAGFLGLEIYEFKHYTHEFGFTIT 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SA S+F+ LVG HG HV FGL+W+ L+I+ K+GL + S++WHF+D++W
Sbjct: 134 SSALGSAFYTLVGTHGAHVAFGLMWISTLMIRNAKRGLNLYTAPKFYVASLYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|296331066|ref|ZP_06873540.1| cytochrome c oxidase, subunit III [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674221|ref|YP_003865893.1| cytochrome c oxidase, subunit III [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151710|gb|EFG92585.1| cytochrome c oxidase, subunit III [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412465|gb|ADM37584.1| cytochrome c oxidase, subunit III [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 207
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
++ ++ +LGFW++L + ++FA F T+ L + A P ++FD++ +F++T
Sbjct: 15 SPEKVTLEGKNKFLGFWLFLGGETVLFASLFATFLALRNSNAGDPPTTEMFDVTLVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-Q 137
++LL SSL+ +AM K WL +T G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFSF-GKMQLWLGITILLGAGFLGLEIYEFKHYTHEFGFTIT 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SA S+F+ LVG HG HV FGL+W+ L+I+ K+GL + S++WHF+D++W
Sbjct: 134 SSALGSAFYTLVGTHGAHVAFGLMWISTLMIRNAKRGLNLYTAPKFYVASLYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|312438566|gb|ADQ77637.1| quinol oxidase subunit III [Staphylococcus aureus subsp. aureus
TCH60]
Length = 201
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 10/190 (5%)
Query: 27 HDG--TYLGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVLL 82
H+G LGFWI++ ++ +F F T L G +YA G ++F++ + + T LL
Sbjct: 13 HEGELNKLGFWIFITAEFALFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFALL 71
Query: 83 LSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
SS +C A+ + ++L+ + W+++T G++F+ EIYEFAH S P +
Sbjct: 72 FSSYTCGIAIYYMRQEKQKLM---MFWMIITLLLGLVFVGFEIYEFAHYASEGVNPTIGS 128
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
+ SSFF L+G HG HV G++W L+IQI + GL N +L +S++WHFLD++W+ +
Sbjct: 129 YWSSFFILLGTHGCHVSLGIVWAICLLIQIQRHGLDKYNAPKLFIVSLYWHFLDVVWVFI 188
Query: 201 FSFVYLMGVV 210
F+ VY++G+V
Sbjct: 189 FTAVYMIGMV 198
>gi|311070326|ref|YP_003975249.1| cytochrome aa3-600 quinol oxidase subunit III [Bacillus atrophaeus
1942]
gi|310870843|gb|ADP34318.1| cytochrome aa3-600 quinol oxidase subunit III [Bacillus atrophaeus
1942]
Length = 204
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL A G P ++F+++ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATFFVLQNRTAGGVLPEELFEVNLVMIMTFLLLISSFTCGIA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + V W ++T G F+ EI EF H + A SAF S FF L+G
Sbjct: 85 V-HEMRRGSLKGVVIWTIITLLLGAGFVGCEINEFVHYVHEGASLGTSAFWSGFFVLLGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HG HV G+ W+ +++Q+ K+GL ++ S++WHFLD++WI +F+ VYLMG+
Sbjct: 144 HGTHVTIGIFWIAGILLQLKKRGLTPQTSSKIFISSLYWHFLDVVWIFIFTGVYLMGL 201
>gi|229541233|ref|ZP_04430293.1| Cytochrome-c oxidase [Bacillus coagulans 36D1]
gi|229325653|gb|EEN91328.1| Cytochrome-c oxidase [Bacillus coagulans 36D1]
Length = 208
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI----DVFDISG 73
+ + + ++ +LGFW++L + ++FA F TY L GPA + D+F++
Sbjct: 14 ESPERATLEGRNKFLGFWLFLGGETVLFASLFATYLALKDK---GPASMVHAKDLFELPL 70
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS-M 132
F++T+ LL SS++ +A+ K +W L+T G F+ +E+YEF H ++
Sbjct: 71 TFLATVFLLTSSITSVYAIY-HMKNFAFKKMQAWFLITVLLGACFLGLEVYEFHHYVTEY 129
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
SAF S+F+ LVG HG HV FGL+W+ L+++ K+GL N + S++WHF
Sbjct: 130 HHTFTSSAFGSAFYTLVGFHGGHVAFGLLWITTLMVRNAKRGLNLYNAPKFYVASLYWHF 189
Query: 193 LDLIWICVFSFVYLMGVV 210
+D++W+ +F+ VYLMG+V
Sbjct: 190 IDVVWVFIFTVVYLMGMV 207
>gi|224476169|ref|YP_002633775.1| putative quinol oxidase polypeptide III [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420776|emb|CAL27590.1| putative quinol oxidase polypeptide III [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 200
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVL 81
H+G GFWI+L ++ +F F T ++ +YA D+F++ + + T L
Sbjct: 11 SHEGNLNKFGFWIFLTAEFSLFGTLFATLLIMQHAGDYAH-KLTTDLFELPLVLLMTFAL 69
Query: 82 LLSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
L+SS +C A+ + ++L+ + W+++T G +F+ +EI+EFAH +S PQ
Sbjct: 70 LISSYTCGIAIYYMRQEKQKLM---MIWMIITVALGAVFVGLEIFEFAHYVSEGVTPQIG 126
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
++ SSFF L+G HG HV G++W+ L+IQ+ +GL N +L +S++WHFLD++W+
Sbjct: 127 SYWSSFFILLGTHGAHVSLGIVWIICLLIQVATRGLNEHNAPKLFIVSLYWHFLDVVWVF 186
Query: 200 VFSFVYLMGVV 210
+F+ VY++G+V
Sbjct: 187 IFTAVYMIGMV 197
>gi|319654011|ref|ZP_08008104.1| cytochrome c oxidase subunit III [Bacillus sp. 2_A_57_CT2]
gi|317394333|gb|EFV75078.1| cytochrome c oxidase subunit III [Bacillus sp. 2_A_57_CT2]
Length = 208
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 110/194 (56%), Gaps = 3/194 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI--DVFDISGIFV 76
+ + ++ +LGFW +L + ++FA F TY L G P+ ++F + +FV
Sbjct: 15 SPERATLEAKNKFLGFWFFLGGETVLFASLFATYLALKNKVPNGDHPLTNELFSMEIVFV 74
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
+T++LL+SSL+ AM K WL +T G+ F+ +EIYEF
Sbjct: 75 ATMLLLVSSLTSVCAMYHMKNFNF-KKMQLWLGITVLLGVAFLGLEIYEFTEYFHKGHTF 133
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SAF S+F+ LVG HG HV FGL+W+ L+++ ++GL N + S++WHF+D++
Sbjct: 134 TSSAFGSAFYVLVGFHGAHVAFGLLWIVTLMVRNARRGLNLYNAPKFYVASLYWHFIDVV 193
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG++
Sbjct: 194 WVFIFTVVYLMGMI 207
>gi|73663041|ref|YP_301822.1| quinol oxidase polypeptide III [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642235|sp|Q49WI2|QOX3_STAS1 RecName: Full=Probable quinol oxidase subunit 3; AltName:
Full=Quinol oxidase polypeptide III
gi|72495556|dbj|BAE18877.1| quinol oxidase polypeptide III [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 201
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 115/191 (60%), Gaps = 10/191 (5%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVL--GKNYAAGPAPIDVFDISGIFVSTIVL 81
H+G LGFW++L ++ +F F T L G +YA G ++F++ + + T L
Sbjct: 12 SHEGNLNKLGFWVFLTAEFSLFGTLFATLLTLQHGGDYA-GKMTTELFELPLVLIMTFAL 70
Query: 82 LLSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
L+SS +C A+ + ++L+ + W+++T GM+F+ EIYEFAH +
Sbjct: 71 LISSYTCGIAIYYMRKEKEKLM---LIWMIITVLLGMVFVGFEIYEFAHYVHEGVNLTIG 127
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
++ SSFF L+G HG HV G++W+ L+IQ+ +GL N +L +S++WHFLD++WI
Sbjct: 128 SYWSSFFILLGTHGAHVSLGIVWIICLLIQVAMRGLNKDNAPKLFIVSLYWHFLDVVWIF 187
Query: 200 VFSFVYLMGVV 210
+F+ VY++G+V
Sbjct: 188 IFTAVYMIGMV 198
>gi|39871|emb|CAA38078.1| cytochrome-c oxidase subunit III [Bacillus subtilis]
Length = 207
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
++ ++ +LGFW++L + ++FA F T+ + A P ++FD++ +F++T
Sbjct: 15 SPEKVTLEGKNNFLGFWLFLGGETVLFASLFATFLAASNSNAGDPPTTEMFDVTLVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-Q 137
++LL SSL+ +AM K WL +T G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFSF-GKMQLWLGITILLGAGFLGLEIYEFKHYTHEFGFTIT 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SA S+F+ LVG HG HV FGL+W+ L+I+ K+GL + S++WHF+D++W
Sbjct: 134 SSALGSAFYTLVGTHGAHVAFGLMWISTLMIRNAKRGLNLYTAPKFYVASLYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|15614629|ref|NP_242932.1| cytochrome aa3 quinol oxidase subunit III [Bacillus halodurans
C-125]
gi|10174685|dbj|BAB05785.1| cytochrome aa3 quinol oxidase subunit III [Bacillus halodurans
C-125]
Length = 204
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 7/201 (3%)
Query: 9 SPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV 68
+PN L Y + + + LGFWI+L ++ +FA F +Y VL A D+
Sbjct: 8 NPNQPLEYQSAEGRNNI------LGFWIFLGAEFALFATLFASYFVLVDRNADAVRAADL 61
Query: 69 FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
FD++ + + T +LL SS +C A+ R+ ++ W+ +T G+ F+ EIYEF H
Sbjct: 62 FDLNLVLIMTFLLLTSSFTCGLAIHEMRAGRM-NRMFVWIGLTLLLGLGFVGFEIYEFVH 120
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
A SA S+FF L+G HGLHV G+ W+ +LVIQ+ K+GL + S+
Sbjct: 121 YAHEGATLSASAHWSAFFLLLGTHGLHVSIGIGWIVLLVIQMKKRGLTPRTTSKFFIASL 180
Query: 189 FWHFLDLIWICVFSFVYLMGV 209
+WHFLD++WI +F+ VYL+G+
Sbjct: 181 YWHFLDVVWIMIFTGVYLLGM 201
>gi|295695108|ref|YP_003588346.1| Cytochrome-c oxidase [Bacillus tusciae DSM 2912]
gi|295410710|gb|ADG05202.1| Cytochrome-c oxidase [Bacillus tusciae DSM 2912]
Length = 213
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 110/192 (57%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ + ++ LGFW++L +C +FA F TY L GP ++F + I ++T
Sbjct: 20 GPETATLEGKNKVLGFWVFLGGECALFASLFATYLTLRGQTLNGPTAQELFHLPIIGLAT 79
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
I+LL SSL+ + A L + WL VT G+ F+ +++ EF V
Sbjct: 80 ILLLTSSLTGVLGINAMHRGNL-RSLLRWLGVTVLLGLGFLAVQVVEFITYAGEGFVFGT 138
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+FF LVG HG HV FG++W+ +L++Q+ ++G+ ++ S++WHF+D++W+
Sbjct: 139 SAFSSAFFTLVGFHGGHVAFGVVWISILILQLKREGITPRKAPKVFIASLYWHFVDVVWV 198
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG++
Sbjct: 199 FIFTVVYLMGIL 210
>gi|228992678|ref|ZP_04152604.1| Cytochrome c oxidase subunit 3 [Bacillus pseudomycoides DSM 12442]
gi|228998722|ref|ZP_04158309.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock3-17]
gi|229006224|ref|ZP_04163910.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock1-4]
gi|228755065|gb|EEM04424.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock1-4]
gi|228761190|gb|EEM10149.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock3-17]
gi|228767010|gb|EEM15647.1| Cytochrome c oxidase subunit 3 [Bacillus pseudomycoides DSM 12442]
Length = 207
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMI-FIIMEIYEFAHLI-SMEAVP 136
++LL SSL+ +AM K K + L+ + F+ EIYEF H +
Sbjct: 75 MLLLTSSLTSVYAMYH--MKNFNFKQMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTM 132
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
+ SAF S+F+ALVG HGLHV FGL+W+ LV + K+GL N + S++WHF+D++
Sbjct: 133 RSSAFGSAFYALVGTHGLHVLFGLLWILTLVFRNAKRGLNLYNAPKFYVASIYWHFIDVV 192
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 193 WVFIFTVVYLMGMV 206
>gi|229174609|ref|ZP_04302138.1| Cytochrome c oxidase subunit 3 [Bacillus cereus MM3]
gi|228608861|gb|EEK66154.1| Cytochrome c oxidase subunit 3 [Bacillus cereus MM3]
Length = 207
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQ 137
++LL SSL+ +AM K WLLVT G+ F+ EIYEF H + +
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLAFEIYEFYHYTHEFKHTMR 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W
Sbjct: 134 SSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|254721544|ref|ZP_05183333.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A1055]
Length = 207
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ + ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGENKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQ 137
++LL SSL+ +AM K WLLVT G+ F+ EIYEF H + +
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTMR 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W
Sbjct: 134 SSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|294499884|ref|YP_003563584.1| cytochrome aa3 quinol oxidase subunit III [Bacillus megaterium QM
B1551]
gi|295705269|ref|YP_003598344.1| cytochrome aa3 quinol oxidase subunit III [Bacillus megaterium DSM
319]
gi|294349821|gb|ADE70150.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus megaterium QM
B1551]
gi|294802928|gb|ADF39994.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus megaterium DSM
319]
Length = 202
Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 2/180 (1%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +F+ FVTY A GP ++F + + T++LL SS + A
Sbjct: 23 LGFWIFLGAEIALFSTLFVTYLTYHTRTAGGPTAEELFVVKDFMIETLLLLFSSFTMGIA 82
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF-AHLISMEAVPQRSAFLSSFFALVG 150
+ L + W ++T G F+ EI EF + + A Q SAFLS FF L+G
Sbjct: 83 IFKMRNNDL-KGLLVWFVITLVLGGGFLFYEIREFYMYAVHEGATMQTSAFLSGFFTLLG 141
Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HGLHV G+ W ++IQ++++GL R++ + ++WHFLD++WI +F+ VYL G+V
Sbjct: 142 THGLHVTVGVFWAISIIIQLVRRGLTPVTARKVFIIGLYWHFLDVVWIFIFTLVYLNGLV 201
>gi|67641798|ref|ZP_00440565.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
GB8 horse 4]
gi|121599554|ref|YP_993719.1| cytochrome o ubiquinol oxidase subunit 3 [Burkholderia mallei
SAVP1]
gi|124386320|ref|YP_001028823.1| ubiquinol oxidase, subunit III [Burkholderia mallei NCTC 10229]
gi|126449262|ref|YP_001081266.1| cytochrome o ubiquinol oxidase subunit 3 [Burkholderia mallei NCTC
10247]
gi|167001102|ref|ZP_02266903.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
PRL-20]
gi|121228364|gb|ABM50882.1| CytOchrome o ubiquinol oxidase subunit 3 [Burkholderia mallei
SAVP1]
gi|124294340|gb|ABN03609.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
NCTC 10229]
gi|126242132|gb|ABO05225.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
NCTC 10247]
gi|238522786|gb|EEP86228.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
GB8 horse 4]
gi|243063054|gb|EES45240.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia mallei
PRL-20]
Length = 102
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 115 GMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK- 173
G F+ ME+ EF+HL++ A PQRSAFLSSFF LVG HGLHV GL+W+ VLV Q L++
Sbjct: 6 GAAFLAMELREFSHLVAEGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRP 65
Query: 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
L + RRL CLS+FWHFLD++WICVFSFVYL V+
Sbjct: 66 DLTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI 102
>gi|308175542|ref|YP_003922247.1| cytochrome aa3-600 quinol oxidase subunit III [Bacillus
amyloliquefaciens DSM 7]
gi|307608406|emb|CBI44777.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus
amyloliquefaciens DSM 7]
gi|328555520|gb|AEB26012.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus
amyloliquefaciens TA208]
gi|328913892|gb|AEB65488.1| cytochrome aa3-600 quinol oxidase (subunit III) [Bacillus
amyloliquefaciens LL3]
Length = 204
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL + A G P ++F++ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATFFVLQRRTAGGVLPAELFEVKLVMIMTFLLLISSFTCGIA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + V W ++T G F+ E+ EF H + A SAF S FF L+G
Sbjct: 85 V-HEMRRGSLKGVVIWTIITLLLGAGFVGCELNEFIHYVHEGASLGTSAFWSGFFVLLGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HG HV G+ W+ +++Q+ K+GL ++ S++WHFLD++WI +F+ VYL+G+
Sbjct: 144 HGTHVTIGIFWITGILLQLKKRGLTPQTSSKIFISSLYWHFLDVVWIFIFTGVYLIGL 201
>gi|42783037|ref|NP_980284.1| cytochrome c oxidase, subunit III [Bacillus cereus ATCC 10987]
gi|47565817|ref|ZP_00236856.1| cytochrome c oxidase subunit III [Bacillus cereus G9241]
gi|52141547|ref|YP_085283.1| cytochrome c oxidase, subunit III [Bacillus cereus E33L]
gi|75762088|ref|ZP_00741994.1| Cytochrome c oxidase polypeptide III [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|163941681|ref|YP_001646565.1| cytochrome c oxidase subunit III [Bacillus weihenstephanensis
KBAB4]
gi|206971235|ref|ZP_03232186.1| cytochrome c oxidase, subunit III [Bacillus cereus AH1134]
gi|206978408|ref|ZP_03239278.1| cytochrome c oxidase, subunit III [Bacillus cereus H3081.97]
gi|217961427|ref|YP_002339995.1| cytochrome c oxidase, subunit III [Bacillus cereus AH187]
gi|218235434|ref|YP_002368742.1| cytochrome c oxidase, subunit III [Bacillus cereus B4264]
gi|218899098|ref|YP_002447509.1| cytochrome c oxidase, subunit III [Bacillus cereus G9842]
gi|222097390|ref|YP_002531447.1| cytochrome c oxidase, subunit iii [Bacillus cereus Q1]
gi|228902448|ref|ZP_04066602.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 4222]
gi|228909768|ref|ZP_04073591.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 200]
gi|228922693|ref|ZP_04085992.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954218|ref|ZP_04116246.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960203|ref|ZP_04121860.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228966963|ref|ZP_04128001.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228974035|ref|ZP_04134608.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980627|ref|ZP_04140935.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis Bt407]
gi|228987085|ref|ZP_04147210.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229013147|ref|ZP_04170291.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides DSM 2048]
gi|229019144|ref|ZP_04175978.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1273]
gi|229031572|ref|ZP_04187572.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1271]
gi|229047627|ref|ZP_04193216.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH676]
gi|229071441|ref|ZP_04204663.1| Cytochrome c oxidase subunit 3 [Bacillus cereus F65185]
gi|229075698|ref|ZP_04208680.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-18]
gi|229081194|ref|ZP_04213704.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-2]
gi|229098412|ref|ZP_04229357.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-29]
gi|229104504|ref|ZP_04235171.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-28]
gi|229111412|ref|ZP_04240964.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-15]
gi|229117438|ref|ZP_04246814.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-3]
gi|229129219|ref|ZP_04258192.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-Cer4]
gi|229134750|ref|ZP_04263559.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST196]
gi|229140670|ref|ZP_04269218.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST26]
gi|229146513|ref|ZP_04274884.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST24]
gi|229152140|ref|ZP_04280334.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1550]
gi|229157519|ref|ZP_04285596.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 4342]
gi|229168681|ref|ZP_04296403.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH621]
gi|229180217|ref|ZP_04307561.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 172560W]
gi|229192150|ref|ZP_04319118.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 10876]
gi|229198058|ref|ZP_04324770.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1293]
gi|296504436|ref|YP_003666136.1| cytochrome c oxidase polypeptide III [Bacillus thuringiensis
BMB171]
gi|42738964|gb|AAS42892.1| cytochrome c oxidase, subunit III [Bacillus cereus ATCC 10987]
gi|47557097|gb|EAL15426.1| cytochrome c oxidase subunit III [Bacillus cereus G9241]
gi|51975016|gb|AAU16566.1| cytochrome c oxidase, subunit III [Bacillus cereus E33L]
gi|74490422|gb|EAO53732.1| Cytochrome c oxidase polypeptide III [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|163863878|gb|ABY44937.1| cytochrome c oxidase subunit III [Bacillus weihenstephanensis
KBAB4]
gi|206734007|gb|EDZ51178.1| cytochrome c oxidase, subunit III [Bacillus cereus AH1134]
gi|206743388|gb|EDZ54825.1| cytochrome c oxidase, subunit III [Bacillus cereus H3081.97]
gi|217067304|gb|ACJ81554.1| cytochrome c oxidase, subunit III [Bacillus cereus AH187]
gi|218163391|gb|ACK63383.1| cytochrome c oxidase, subunit III [Bacillus cereus B4264]
gi|218541319|gb|ACK93713.1| cytochrome c oxidase, subunit III [Bacillus cereus G9842]
gi|221241448|gb|ACM14158.1| cytochrome c oxidase, subunit III [Bacillus cereus Q1]
gi|228585416|gb|EEK43522.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1293]
gi|228591357|gb|EEK49208.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 10876]
gi|228603426|gb|EEK60903.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 172560W]
gi|228614837|gb|EEK71940.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH621]
gi|228625969|gb|EEK82719.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 4342]
gi|228631332|gb|EEK87967.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1550]
gi|228637146|gb|EEK93605.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST24]
gi|228642742|gb|EEK99025.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST26]
gi|228648796|gb|EEL04822.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST196]
gi|228654456|gb|EEL10321.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-Cer4]
gi|228666048|gb|EEL21514.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-3]
gi|228672028|gb|EEL27320.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-15]
gi|228678946|gb|EEL33156.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-28]
gi|228685029|gb|EEL38962.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-29]
gi|228702238|gb|EEL54714.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-2]
gi|228707474|gb|EEL59665.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-18]
gi|228711732|gb|EEL63685.1| Cytochrome c oxidase subunit 3 [Bacillus cereus F65185]
gi|228723721|gb|EEL75077.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH676]
gi|228729861|gb|EEL80841.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1271]
gi|228742160|gb|EEL92326.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1273]
gi|228748097|gb|EEL97958.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides DSM 2048]
gi|228772679|gb|EEM21120.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228779095|gb|EEM27354.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis Bt407]
gi|228785671|gb|EEM33677.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792697|gb|EEM40261.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228799471|gb|EEM46431.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805538|gb|EEM52129.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836967|gb|EEM82309.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228850057|gb|EEM94888.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 200]
gi|228857192|gb|EEN01698.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 4222]
gi|296325488|gb|ADH08416.1| cytochrome c oxidase polypeptide III [Bacillus thuringiensis
BMB171]
gi|324327842|gb|ADY23102.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|326941714|gb|AEA17610.1| cytochrome c oxidase polypeptide III [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 207
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQ 137
++LL SSL+ +AM K WLLVT G+ F+ EIYEF H + +
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMR 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W
Sbjct: 134 SSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|126653833|ref|ZP_01725696.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. B14905]
gi|126589670|gb|EAZ83807.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. B14905]
Length = 203
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWI+L ++ ++FA F Y L +GP ++F+++ + T +LL SS + +
Sbjct: 26 GFWIFLGAEIVLFATLFTVYFTLHTRTGSGPNGAEIFELTPVLWETFLLLTSSFTIGLGV 85
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A R +++ ++T G+ F+ +EI EF + A Q SAFLSS L+G H
Sbjct: 86 HAMRIGRK-KAMMTFFIITLLLGLGFLAIEIDEFITYVHEGATIQTSAFLSSLMTLLGTH 144
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G HV FG W ++IQ+ K+GL + S++WHFLD++WI +FSFVYL G++
Sbjct: 145 GAHVTFGFFWGLAIIIQVAKRGLNPQTANKAFIFSLYWHFLDVVWIFIFSFVYLKGLI 202
>gi|154687940|ref|YP_001423101.1| QoxC [Bacillus amyloliquefaciens FZB42]
gi|154353791|gb|ABS75870.1| QoxC [Bacillus amyloliquefaciens FZB42]
Length = 204
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 1/178 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ ++F+ F T+ VL + A G P ++F++ + + T +LL+SS +C A
Sbjct: 25 LGFWIFLGAEIVLFSTLFATFFVLQRRTAGGVLPAELFEVKLVMIMTFLLLISSFTCGIA 84
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ + + V W ++T G F+ E+ EF H + A SAF S FF L+G
Sbjct: 85 V-HEMRRGSLKGVVIWTIITLLLGAGFVGCELNEFIHYVHEGASLGTSAFWSGFFVLLGT 143
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209
HG HV G+ W+ +++Q+ K+GL ++ S++WHFLD++WI +F+ VYL+G+
Sbjct: 144 HGTHVTIGIFWIAGILLQLKKRGLTPQTSSKIFISSLYWHFLDVVWIFIFTGVYLIGL 201
>gi|295698391|ref|YP_003603046.1| Cytochrome o ubiquinol oxidase subunit 3 [Candidatus Riesia
pediculicola USDA]
gi|291157388|gb|ADD79833.1| Cytochrome o ubiquinol oxidase subunit 3 [Candidatus Riesia
pediculicola USDA]
Length = 196
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
D +++ ++ T LGFWIYLMSD L F + Y+V K D ++ +F+ T
Sbjct: 4 DNEDTLRKNNKTLLGFWIYLMSDMLFFVSLILVYSVFLKEDVRFSILRDQINLKIVFLET 63
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
I+L +SL F+ + R + L + G+ F +E YE + L + P+
Sbjct: 64 ILLSTNSLMFYFSETSFQLNRKKEFFIKILFFSLIIGVTFFFVETYEISKLFQCQFFPKN 123
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
S+ S+FF+++G H LHVFFGLIW+ V+ +IL KGL + L CLS FWHFLD++WI
Sbjct: 124 SSIFSAFFSVIGAHSLHVFFGLIWIIVMEGKILFKGLDKNSLVSLKCLSDFWHFLDIMWI 183
Query: 199 CVFSFVYLM 207
+ S V+L+
Sbjct: 184 LIVSVVHLL 192
>gi|30264013|ref|NP_846390.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Ames]
gi|47529450|ref|YP_020799.1| cytochrome c oxidase subunit III [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186852|ref|YP_030104.1| cytochrome c oxidase subunit III [Bacillus anthracis str. Sterne]
gi|49478458|ref|YP_038004.1| cytochrome c oxidase subunit III [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65321337|ref|ZP_00394296.1| COG1845: Heme/copper-type cytochrome/quinol oxidase, subunit 3
[Bacillus anthracis str. A2012]
gi|118479159|ref|YP_896310.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis str. Al
Hakam]
gi|165872133|ref|ZP_02216772.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0488]
gi|167633499|ref|ZP_02391823.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0442]
gi|167640968|ref|ZP_02399225.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0193]
gi|170688794|ref|ZP_02879998.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0465]
gi|170705795|ref|ZP_02896258.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0389]
gi|177654276|ref|ZP_02936205.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0174]
gi|190565931|ref|ZP_03018850.1| cytochrome c oxidase, subunit III [Bacillus anthracis
Tsiankovskii-I]
gi|196035910|ref|ZP_03103312.1| cytochrome c oxidase, subunit III [Bacillus cereus W]
gi|196038642|ref|ZP_03105950.1| cytochrome c oxidase, subunit III [Bacillus cereus NVH0597-99]
gi|196045939|ref|ZP_03113168.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB108]
gi|218905073|ref|YP_002452907.1| cytochrome c oxidase, subunit III [Bacillus cereus AH820]
gi|225865924|ref|YP_002751302.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB102]
gi|227816716|ref|YP_002816725.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. CDC 684]
gi|228916579|ref|ZP_04080145.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928989|ref|ZP_04092021.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935257|ref|ZP_04098083.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947661|ref|ZP_04109951.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229092991|ref|ZP_04224122.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-42]
gi|229123463|ref|ZP_04252662.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 95/8201]
gi|229604758|ref|YP_002868242.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0248]
gi|254683709|ref|ZP_05147569.1| cytochrome c oxidase, subunit III [Bacillus anthracis str.
CNEVA-9066]
gi|254736054|ref|ZP_05193760.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Western
North America USA6153]
gi|254743945|ref|ZP_05201628.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Kruger
B]
gi|254754276|ref|ZP_05206311.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Vollum]
gi|254758033|ref|ZP_05210060.1| cytochrome c oxidase, subunit III [Bacillus anthracis str.
Australia 94]
gi|301055433|ref|YP_003793644.1| cytochrome c oxidase subunit III [Bacillus anthracis CI]
gi|30258658|gb|AAP27876.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Ames]
gi|47504598|gb|AAT33274.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180779|gb|AAT56155.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Sterne]
gi|49330014|gb|AAT60660.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118418384|gb|ABK86803.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis str. Al
Hakam]
gi|164712080|gb|EDR17618.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0488]
gi|167511018|gb|EDR86407.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0193]
gi|167530905|gb|EDR93592.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0442]
gi|170129335|gb|EDS98199.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0389]
gi|170667310|gb|EDT18069.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0465]
gi|172080766|gb|EDT65847.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0174]
gi|190562850|gb|EDV16816.1| cytochrome c oxidase, subunit III [Bacillus anthracis
Tsiankovskii-I]
gi|195991559|gb|EDX55525.1| cytochrome c oxidase, subunit III [Bacillus cereus W]
gi|196023379|gb|EDX62057.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB108]
gi|196030365|gb|EDX68964.1| cytochrome c oxidase, subunit III [Bacillus cereus NVH0597-99]
gi|218537730|gb|ACK90128.1| cytochrome c oxidase, subunit III [Bacillus cereus AH820]
gi|225788326|gb|ACO28543.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB102]
gi|227005165|gb|ACP14908.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. CDC 684]
gi|228659950|gb|EEL15591.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 95/8201]
gi|228690362|gb|EEL44148.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-42]
gi|228812181|gb|EEM58512.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824422|gb|EEM70228.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830796|gb|EEM76401.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843158|gb|EEM88240.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229269166|gb|ACQ50803.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0248]
gi|300377602|gb|ADK06506.1| cytochrome c oxidase, subunit III [Bacillus cereus biovar anthracis
str. CI]
Length = 207
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQ 137
++LL SSL+ +AM K WLLVT G+ F+ EIYEF H + +
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTMR 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W
Sbjct: 134 SSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|255021770|ref|ZP_05293802.1| Cytochrome O ubiquinol oxidase subunit III [Acidithiobacillus
caldus ATCC 51756]
gi|254968791|gb|EET26321.1| Cytochrome O ubiquinol oxidase subunit III [Acidithiobacillus
caldus ATCC 51756]
Length = 212
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGK--NYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSF 90
GFW+Y+++D +++A F + VL N A GP P + D + TI L LS L+ +
Sbjct: 33 GFWLYMLTDAMVYAALFASLGVLSHVVNLAGGPPPAAIIDPVYAYGETITLFLSVLAYGY 92
Query: 91 AMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVG 150
+M+A + + +LV+ G++F+ + + HL S +P+ S FLS FF ++
Sbjct: 93 SMVALKSGSR-GGVIGAMLVSMLLGVVFLGIAATDIGHLFSRGIIPETSGFLSIFFTILI 151
Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
H LH+ G++W+ V++ QI + G + RLI L +FWHF +IW+ VF+FVYL G+V
Sbjct: 152 YHALHILVGIVWMLVMIAQIARDGFTANVVYRLINLRLFWHFQAVIWVFVFTFVYLQGMV 211
>gi|299535602|ref|ZP_07048923.1| quinol oxidase subunit 3 [Lysinibacillus fusiformis ZC1]
gi|298728802|gb|EFI69356.1| quinol oxidase subunit 3 [Lysinibacillus fusiformis ZC1]
Length = 199
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWI+L ++ ++FA F Y L +GP ++F+++ + T +LL SS + +
Sbjct: 22 GFWIFLGAEIVLFATLFTVYFTLHTRTGSGPNGAEIFELTPVLWETFLLLTSSFTIGLGV 81
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A R +++ ++T G+ F+ +EI EF + A Q SAFLSS L+G H
Sbjct: 82 HAMRIGRK-KAMMTFFIITLLLGLGFLAIEIDEFVTYVHEGATIQTSAFLSSLMTLLGTH 140
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G HV FG W ++IQ+ K+GL + S++WHFLD++WI +FSFVYL G++
Sbjct: 141 GAHVTFGFFWGVAILIQVAKRGLNPQTANKAFIFSLYWHFLDVVWIFIFSFVYLKGLI 198
>gi|169829427|ref|YP_001699585.1| quinol oxidase subunit 3 [Lysinibacillus sphaericus C3-41]
gi|168993915|gb|ACA41455.1| Quinol oxidase subunit 3 [Lysinibacillus sphaericus C3-41]
Length = 199
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFWI+L ++ ++FA F Y L GP ++F+++ + T +LL SS + +
Sbjct: 22 GFWIFLGAEIVLFATLFTVYFTLHTRTGNGPNGAEIFELTPVLWETFLLLTSSFTIGLGV 81
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A R +++ ++T G+ F+ +EI EF + A Q SAFLSS L+G H
Sbjct: 82 HAMRIGRK-KAMMTFFIITLLLGLGFLAIEIDEFITYVHEGATIQTSAFLSSLMTLLGTH 140
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G HV FG W ++IQ+ K+GL + S++WHFLD++WI +FSFVYL G++
Sbjct: 141 GAHVTFGFFWGLAIIIQVAKRGLNPQTANKAFIFSLYWHFLDVVWIFIFSFVYLKGLI 198
>gi|226314594|ref|YP_002774490.1| cytochrome c oxidase polypeptide III [Brevibacillus brevis NBRC
100599]
gi|226097544|dbj|BAH45986.1| cytochrome c oxidase polypeptide III [Brevibacillus brevis NBRC
100599]
Length = 208
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ +++ ++ LGFW++L + ++F F T+ L GP +FD++ + V+
Sbjct: 12 DEPEKATLEGKNKVLGFWLFLGGETVLFGSLFATFIALRDQANGGPTSQALFDMNLVAVA 71
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
T++LL SS++ A LA K L K WL +T G+ F+ +EIYEF H ++
Sbjct: 72 TLLLLTSSMTSVMATLALHRKDL-KKIQLWLTITVILGLGFLALEIYEFVHYVNEGLKMS 130
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF S+F+ LVG HG HV FG+ W+ +L + KKGL + ++WHF+D++W
Sbjct: 131 TSAFSSAFYTLVGFHGAHVAFGICWITLLQLSATKKGLTVVTAPKFYLACLYWHFIDVVW 190
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG++
Sbjct: 191 VFIFTVVYLMGMI 203
>gi|152976356|ref|YP_001375873.1| cytochrome c oxidase subunit III [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025108|gb|ABS22878.1| cytochrome c oxidase subunit III [Bacillus cytotoxicus NVH 391-98]
Length = 207
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP+ ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPSSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMI-FIIMEIYEFAHLI-SMEAVP 136
++LL SSL+ +AM K K + L+ + F+ EIYEF H +
Sbjct: 75 MLLLTSSLTSVYAMYH--MKNFHFKQMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTM 132
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
+ SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++
Sbjct: 133 RSSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVV 192
Query: 197 WICVFSFVYLMGVV 210
W+ +F+ VYLMG+V
Sbjct: 193 WVFIFTVVYLMGMV 206
>gi|212639692|ref|YP_002316212.1| cytochrome caa3 oxidase subunit III [Anoxybacillus flavithermus
WK1]
gi|212561172|gb|ACJ34227.1| Cytochrome caa3 oxidase (subunit III) [Anoxybacillus flavithermus
WK1]
Length = 206
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ +LGFW +L + ++FA F T+ L + A GP ++F + +F++T
Sbjct: 15 EPEKATLEGKNKFLGFWFFLGGETVLFASLFATFLALRDSVANGPTAEELFKMPIVFLAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
++LL SSL+ +AM + K + WL +T G F+ +EIYEF +
Sbjct: 75 MLLLTSSLTSVYAM--HHMRNFDFKKMQLWLGITVLLGAGFLALEIYEFTEYVHEGFKFS 132
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF SSF+ LVG HG HV FGL+W+ L+++ K+GL N + S++WHF+D++W
Sbjct: 133 TSAFSSSFYTLVGTHGGHVAFGLLWIITLMVRNAKRGLNLYNAPKFYVASLYWHFIDVVW 192
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 193 VFIFTVVYLMGMV 205
>gi|332974252|gb|EGK11184.1| cytochrome c oxidase, subunit III [Desmospora sp. 8437]
Length = 209
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 1/192 (0%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ + ++ LGFW++L ++ +MFA FF Y L + GP +++ I + ST
Sbjct: 18 HPERATMEGRNKILGFWLFLGAETVMFACFFGVYLALRNSSMDGPTTQELYHIPMVAAST 77
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL SSL+ ++ + KT+ W VT G F+ +EIYEF +
Sbjct: 78 LILLFSSLTSVLGVVG-MQQHHYKKTMFWFGVTVLLGASFLALEIYEFFVYVGEGHTFTS 136
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+F+ L+G HG HV FG+ W+ L+ Q K+GL + S++WHF+D++W+
Sbjct: 137 SAFGSAFYTLLGTHGAHVLFGVCWITGLLFQARKQGLSQQMAPKFYVASLYWHFIDVVWV 196
Query: 199 CVFSFVYLMGVV 210
+F+ VYLMG V
Sbjct: 197 FIFTVVYLMGKV 208
>gi|89099556|ref|ZP_01172431.1| cytochrome c oxidase subunit III [Bacillus sp. NRRL B-14911]
gi|89085709|gb|EAR64835.1| cytochrome c oxidase subunit III [Bacillus sp. NRRL B-14911]
Length = 209
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 4/195 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI--DVFDISGIFV 76
++ ++ +LGFW +L + ++FA F TY L + D+F++ +F
Sbjct: 15 SPEKQTLEAKNKFLGFWFFLGGETVLFASLFATYLALKDKVPGTEHALAKDLFELPLVFA 74
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAV 135
+T++LL SSL+ +AM K W+ +T G F+ +EIYEF H +
Sbjct: 75 ATMLLLTSSLTSVYAMYHMKNFNF-KKMQLWMWITVALGAAFLGLEIYEFNHYVHEYHHT 133
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
SAF S+F+ LVG HG HV FGL+W+ L+I+ ++GL N + S++WHF+D+
Sbjct: 134 FTSSAFGSAFYTLVGFHGGHVAFGLLWITTLLIRNSRRGLSLYNAPKFYVASLYWHFIDV 193
Query: 196 IWICVFSFVYLMGVV 210
+W+ +F+ VYLMG+V
Sbjct: 194 VWVFIFTVVYLMGMV 208
>gi|315646713|ref|ZP_07899829.1| cytochrome aa3 quinol oxidase, subunit III [Paenibacillus vortex
V453]
gi|315277919|gb|EFU41242.1| cytochrome aa3 quinol oxidase, subunit III [Paenibacillus vortex
V453]
Length = 198
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
++ GFW++L ++ +FA F Y VL +A+GP+ ++F+I+ + + T +LL SS
Sbjct: 15 ENRNRIFGFWLFLGAEIALFATLFTVYFVLVNRFASGPSGAEIFEITPVLLETFLLLTSS 74
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ A+ A L + + ++++T G F+ +EI+EF + SAF SS
Sbjct: 75 FTIGLAVHAMRLG-LKKQMMIFMVITLLLGAGFLGIEIFEFFTYVHEGVTLSTSAFASSL 133
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F L+G HG HV FGL+W ++IQ+ K GL + S++WHFLD++WI +FSFVY
Sbjct: 134 FTLLGTHGAHVTFGLLWGTAILIQLKKHGLDHSTANKSFIFSLYWHFLDVVWIFIFSFVY 193
Query: 206 LMGVV 210
L G++
Sbjct: 194 LKGLM 198
>gi|30022030|ref|NP_833661.1| cytochrome c oxidase polypeptide III [Bacillus cereus ATCC 14579]
gi|29897586|gb|AAP10862.1| Cytochrome c oxidase polypeptide III [Bacillus cereus ATCC 14579]
Length = 207
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+ +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T
Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQ 137
++LL SSL+ +AM K WLLVT G+ F+ EIYEF H + +
Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMR 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SAF +F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W
Sbjct: 134 SSAFGYAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|261406337|ref|YP_003242578.1| cytochrome aa3 quinol oxidase subunit III [Paenibacillus sp.
Y412MC10]
gi|329922393|ref|ZP_08278070.1| cytochrome aa3 quinol oxidase, subunit III [Paenibacillus sp. HGF5]
gi|261282800|gb|ACX64771.1| cytochrome aa3 quinol oxidase, subunit III [Paenibacillus sp.
Y412MC10]
gi|328942256|gb|EGG38527.1| cytochrome aa3 quinol oxidase, subunit III [Paenibacillus sp. HGF5]
Length = 198
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
++ GFW++L ++ +FA F Y VL +A+GP+ ++F+I+ + + T +LL SS
Sbjct: 15 ENRNRIFGFWLFLGAEIALFATLFTVYFVLVNRFASGPSGAEIFEITPVLLETFLLLTSS 74
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+ A+ A L + + ++++T G F+ +EI+EF + SAF SS
Sbjct: 75 FTIGLAVHAMRLG-LKKQMMIFMVITLLLGAGFLGIEIFEFFTYVHEGVTLSTSAFSSSL 133
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F L+G HG HV FGL+W ++IQ+ K GL + S++WHFLD++WI +FSFVY
Sbjct: 134 FTLLGTHGAHVTFGLLWGTAILIQLKKHGLDHSTANKSFIFSLYWHFLDVVWIFIFSFVY 193
Query: 206 LMGVV 210
L G++
Sbjct: 194 LKGLM 198
>gi|254824762|ref|ZP_05229763.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
J1-194]
gi|293594001|gb|EFG01762.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
J1-194]
Length = 203
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + + N + Y ++ + LGFWI+L ++ +FA F TY V+ K AG
Sbjct: 2 ESVETNKNLPIEYRSEQGRLNI------LGFWIFLGAEIALFATLFATYFVMRKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + + T +LL SS +C A + K + + ++T G F+ E
Sbjct: 56 HPPAEMFELWLVLIMTFLLLTSSFTCGLA-IGEMRKGNVKMLTIYSIITLILGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182
+YEFAH +++ Q ++ S+FF L+G HGLHV G+ W+ ++IQI GL +
Sbjct: 115 LYEFAHYVTVGVTMQIGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTPKTASK 174
Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ S++WHFLD++WI +F+ VYL+G+V
Sbjct: 175 VFISSLYWHFLDVVWIFIFTGVYLLGMV 202
>gi|4432891|dbj|BAA20886.1| cytochrome c oxidase subunit III [Bacillus sp.]
Length = 190
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP-IDVFDISGI 74
+ +++ ++ +LGFW++L + ++FA F TY L K+ AG P ++FD+ +
Sbjct: 12 FPDSPEKATLEGKNKFLGFWLFLGGETVLFASLFATYLAL-KDSTAGTKPGAEIFDLGLV 70
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
F +T++LL SSL+ +AM K W+ +T G+ F+I+EIYEF H I +
Sbjct: 71 FAATMILLTSSLTSVYAMYHMKNFNF-RKMQLWMFITWLLGLSFLILEIYEFMHYIHLGH 129
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
SAF S+F+ LVG HG HV FGL+W+ L+I+ K GL N + S++WHFLD
Sbjct: 130 TFTSSAFGSAFYTLVGTHGAHVCFGLLWIGTLLIRYSKGGLNLYNAPKFYVASLYWHFLD 189
Query: 195 L 195
+
Sbjct: 190 V 190
>gi|51893236|ref|YP_075927.1| cytochrome C oxidase subunit III [Symbiobacterium thermophilum IAM
14863]
gi|51856925|dbj|BAD41083.1| cytochrome C oxidase subunit III [Symbiobacterium thermophilum IAM
14863]
Length = 210
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
D LGFW+++ S+ + FA V Y V Y G P D+F+I VST VLL+SSL+
Sbjct: 28 DNRKLGFWLFIASESIFFACLLVGYLVFRGGYQPGVGPRDLFNIELTTVSTFVLLMSSLA 87
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
A+ A A + W+LVTA G+ F+ + YEF H S F ++F+
Sbjct: 88 MVLAVNA-AQRNEGRAARRWVLVTALMGLTFLGFQAYEFTHFYHAGLSLSSSVFGTAFYT 146
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L G HG HV G+IWL L+ KGL + ++WHF+D++WI +F+ VYL+
Sbjct: 147 LTGFHGAHVAVGVIWLLTLLYHGRGKGLTVDKADDVEVAGLYWHFVDIVWIVLFTVVYLL 206
>gi|16802063|ref|NP_463548.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes EGD-e]
gi|47095076|ref|ZP_00232688.1| quinol oxidase AA3, subunit III [Listeria monocytogenes str. 1/2a
F6854]
gi|224498293|ref|ZP_03666642.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes Finland
1988]
gi|224503061|ref|ZP_03671368.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes FSL
R2-561]
gi|254827440|ref|ZP_05232127.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
N3-165]
gi|254830692|ref|ZP_05235347.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes 10403S]
gi|254899670|ref|ZP_05259594.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes J0161]
gi|254913127|ref|ZP_05263139.1| cytochrome c oxidase polypeptide I/III subunit 1 [Listeria
monocytogenes J2818]
gi|254937508|ref|ZP_05269205.1| heme-copper oxidase subunit I+III [Listeria monocytogenes F6900]
gi|255025411|ref|ZP_05297397.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes FSL
J2-003]
gi|284803250|ref|YP_003415115.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes 08-5578]
gi|284996391|ref|YP_003418159.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes 08-5923]
gi|315273205|ref|ZP_07869232.1| cytochrome aa3 quinol oxidase, subunit III [Listeria marthii FSL
S4-120]
gi|16409374|emb|CAC98230.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes EGD-e]
gi|47016421|gb|EAL07342.1| quinol oxidase AA3, subunit III [Listeria monocytogenes str. 1/2a
F6854]
gi|258599817|gb|EEW13142.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
N3-165]
gi|258610109|gb|EEW22717.1| heme-copper oxidase subunit I+III [Listeria monocytogenes F6900]
gi|284058812|gb|ADB69753.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes 08-5578]
gi|284061858|gb|ADB72797.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes 08-5923]
gi|293591129|gb|EFF99463.1| cytochrome c oxidase polypeptide I/III subunit 1 [Listeria
monocytogenes J2818]
gi|313616167|gb|EFR89265.1| cytochrome aa3 quinol oxidase, subunit III [Listeria marthii FSL
S4-120]
Length = 203
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + + N + Y ++ + LGFWI+L ++ +FA F TY V+ K AG
Sbjct: 2 ESVETNKNLPIEYRSEQGRLNI------LGFWIFLGAEIALFATLFATYFVMRKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + + T +LL SS +C A + K + + ++T G F+ E
Sbjct: 56 HPPAEMFELWLVLIMTFLLLTSSFTCGLA-IGEMRKGNVKMLTIYSIITLILGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182
+YEFAH ++ Q ++ S+FF L+G HGLHV G+ W+ ++IQI GL +
Sbjct: 115 LYEFAHYVTEGVTMQVGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTPKTASK 174
Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ S++WHFLD++WI +F+ VYL+G+V
Sbjct: 175 VFISSLYWHFLDVVWIFIFTGVYLLGMV 202
>gi|116871438|ref|YP_848219.1| cytochrome aa3 quinol oxidase, subunit III [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116740316|emb|CAK19434.1| cytochrome aa3 quinol oxidase, subunit III [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 203
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + + N + Y ++ + LGFWI+L ++ +FA F TY V+ K AG
Sbjct: 2 ESVEANKNLPIEYRSEQGRLNI------LGFWIFLGAEIALFATLFATYFVMRKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + + T +LL SS +C A + K + + ++T G F+ E
Sbjct: 56 HPPAEMFELWLVLIMTFLLLTSSFTCGLA-IGEMRKGNVKMLTIYSIITLILGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182
+YEFAH ++ Q ++ S+FF L+G HGLHV G+ W+ ++IQI GL +
Sbjct: 115 LYEFAHYVTEGVTMQVGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTPKTASK 174
Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ S++WHFLD++WI +F+ VYL+G+V
Sbjct: 175 VFISSLYWHFLDVVWIFIFTGVYLLGMV 202
>gi|229010129|ref|ZP_04167342.1| Quinol oxidase subunit 3 [Bacillus mycoides DSM 2048]
gi|228751126|gb|EEM00939.1| Quinol oxidase subunit 3 [Bacillus mycoides DSM 2048]
Length = 168
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F +Y VL A GP P +F++ + + T++LL SS +C A + K
Sbjct: 1 MLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA-IHEMRKHNQK 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
++W ++T G F+ EI EF + A Q SAFLS+FF L+G HG HV G+IW
Sbjct: 60 GMLAWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGTHGAHVTGGIIW 119
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 120 ATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 167
>gi|46906241|ref|YP_012630.1| quinol oxidase AA3, subunit III [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093030|ref|ZP_00230809.1| quinol oxidase AA3, subunit III [Listeria monocytogenes str. 4b
H7858]
gi|217965919|ref|YP_002351597.1| cytochrome aa3 quinol oxidase, subunit III [Listeria monocytogenes
HCC23]
gi|226222655|ref|YP_002756762.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes
Clip81459]
gi|254851826|ref|ZP_05241174.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
R2-503]
gi|254930851|ref|ZP_05264210.1| heme-copper oxidase subunit I+III [Listeria monocytogenes HPB2262]
gi|254992951|ref|ZP_05275141.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes FSL
J2-064]
gi|255519796|ref|ZP_05387033.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes FSL
J1-175]
gi|289433388|ref|YP_003463260.1| quinol oxidase AA3, subunit III [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|290892053|ref|ZP_06555050.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
J2-071]
gi|300763372|ref|ZP_07073370.1| quinol oxidase AA3, subunit III [Listeria monocytogenes FSL N1-017]
gi|46879505|gb|AAT02807.1| quinol oxidase AA3, subunit III [Listeria monocytogenes serotype 4b
str. F2365]
gi|47018598|gb|EAL09352.1| quinol oxidase AA3, subunit III [Listeria monocytogenes str. 4b
H7858]
gi|217335189|gb|ACK40983.1| cytochrome aa3 quinol oxidase, subunit III [Listeria monocytogenes
HCC23]
gi|225875117|emb|CAS03807.1| Putative AA3-600 quinol oxidase subunit III [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605118|gb|EEW17726.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
R2-503]
gi|289169632|emb|CBH26166.1| quinol oxidase AA3, subunit III [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|290558647|gb|EFD92164.1| heme-copper oxidase subunit I+III [Listeria monocytogenes FSL
J2-071]
gi|293582395|gb|EFF94427.1| heme-copper oxidase subunit I+III [Listeria monocytogenes HPB2262]
gi|300515649|gb|EFK42698.1| quinol oxidase AA3, subunit III [Listeria monocytogenes FSL N1-017]
gi|307569538|emb|CAR82717.1| quinol oxidase AA3, subunit III [Listeria monocytogenes L99]
gi|313611813|gb|EFR86303.1| cytochrome aa3 quinol oxidase, subunit III [Listeria monocytogenes
FSL F2-208]
gi|313640100|gb|EFS04726.1| cytochrome aa3 quinol oxidase, subunit III [Listeria seeligeri FSL
S4-171]
gi|328468339|gb|EGF39345.1| quinol oxidase AA3, subunit III [Listeria monocytogenes 1816]
gi|328476158|gb|EGF46864.1| quinol oxidase AA3, subunit III [Listeria monocytogenes 220]
gi|332310353|gb|EGJ23448.1| Quinol oxidase subunit 3 [Listeria monocytogenes str. Scott A]
Length = 203
Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + + N + Y ++ + LGFWI+L ++ +FA F TY V+ K AG
Sbjct: 2 ESVETNKNLPIEYRSEQGRLNI------LGFWIFLGAEIALFATLFATYFVMRKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + + T +LL SS +C A + K + + ++T G F+ E
Sbjct: 56 HPPAEMFELWLVLIMTFLLLTSSFTCGLA-IGEMRKGNVKMLTIYSIITLILGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182
+YEFAH ++ Q ++ S+FF L+G HGLHV G+ W+ ++IQI GL +
Sbjct: 115 LYEFAHYVTEGVTMQIGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTPKTASK 174
Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ S++WHFLD++WI +F+ VYL+G+V
Sbjct: 175 VFISSLYWHFLDVVWIFIFTGVYLLGMV 202
>gi|16799094|ref|NP_469362.1| AA3-600 quinol oxidase subunit III [Listeria innocua Clip11262]
gi|16412436|emb|CAC95248.1| AA3-600 quinol oxidase subunit III [Listeria innocua Clip11262]
Length = 203
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + + N + Y ++ + LGFWI+L ++ +FA F TY V+ K AG
Sbjct: 2 ESVETNKNLPIEYRSEQGRLNI------LGFWIFLGAEIALFATLFATYFVMRKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + + T +LL SS +C A + K + + ++T G F+ E
Sbjct: 56 HPPAEMFELWLVLIMTFLLLASSFTCGLA-IGEMRKGNVKMLTIYSIITLILGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182
+YEFAH ++ Q ++ S+FF L+G HGLHV G+ W+ ++IQI GL +
Sbjct: 115 LYEFAHYVTEGVTMQIGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTPKTASK 174
Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210
+ S++WHFLD++WI +F+ VYL+G+V
Sbjct: 175 VFISSLYWHFLDVVWIFIFTGVYLLGMV 202
>gi|229061605|ref|ZP_04198947.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH603]
gi|228717696|gb|EEL69349.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH603]
Length = 186
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+ ++GFW++L + ++FA F TY L + GP ++F + +F+ T++LL SSL+
Sbjct: 3 ENKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMTMLLLTSSLT 62
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQRSAFLSSFF 146
+AM K WLLVT G+ F+ EIYEF H + + SAF S+F+
Sbjct: 63 SVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMRSSAFGSAFY 121
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ +F+ VYL
Sbjct: 122 ALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWVFIFTVVYL 181
Query: 207 MGVV 210
MG+V
Sbjct: 182 MGMV 185
>gi|229186182|ref|ZP_04313351.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BGSC 6E1]
gi|228597358|gb|EEK55009.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BGSC 6E1]
Length = 186
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+ ++GFW++L + ++FA F TY L + GP ++F + +F+ T++LL SSL+
Sbjct: 3 ENKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMTMLLLTSSLT 62
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQRSAFLSSFF 146
+AM K WLLVT G+ F+ EIYEF H + + SAF S+F+
Sbjct: 63 SVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTMRSSAFGSAFY 121
Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ +F+ VYL
Sbjct: 122 ALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWVFIFTVVYL 181
Query: 207 MGVV 210
MG+V
Sbjct: 182 MGMV 185
>gi|311068008|ref|YP_003972931.1| cytochrome c oxidase, subunit III [Bacillus atrophaeus 1942]
gi|310868525|gb|ADP32000.1| cytochrome c oxidase, subunit III [Bacillus atrophaeus 1942]
Length = 207
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
+++ ++ +LGFW++L + ++FA F T+ L + A+ P ++FD+S +F++T
Sbjct: 15 SPEKATLEGKNKFLGFWLFLGGETVLFASLFATFLALRNSNASDPPTSEMFDLSLVFIAT 74
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-Q 137
++LL SSL+ +AM K WLL+T G F+ +EIYEF H
Sbjct: 75 MLLLTSSLTSVYAMY-HMKNFAFGKMQLWLLLTLLLGAGFLGVEIYEFKHYTHEFGFTIT 133
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
SA SSF+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W
Sbjct: 134 SSALGSSFYTLVGTHGAHVAFGLLWISALMIRNAKRGLSLYNAPKFYVASLYWHFIDVVW 193
Query: 198 ICVFSFVYLMGVV 210
+ +F+ VYLMG+V
Sbjct: 194 VFIFTVVYLMGMV 206
>gi|126651761|ref|ZP_01723963.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. B14905]
gi|126591439|gb|EAZ85546.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. B14905]
Length = 198
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFW+++ ++ ++F F Y VL GP D+F+I+ + T +LL SS +
Sbjct: 21 LGFWVFIGAEIMLFGTLFAAYFVLVDRTGTGPTGADIFEITPVLFETFILLTSSFTIGLG 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A K + +++ ++T G+ FI E+YEF H + + A Q SAF ++ +G
Sbjct: 81 IHA-MRKGYMKAMITFYILTLLLGVAFIGFEVYEFIHYVHVGAGLQTSAFTATLLTTLGT 139
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV FG+ W +V Q++ +GL + S++WHFLD++WI +FSF+YL G+V
Sbjct: 140 HGAHVTFGVFWGIFIVYQLITRGLTPETANKSFIFSLYWHFLDVVWIFIFSFIYLKGMV 198
>gi|169828387|ref|YP_001698545.1| cytochrome aa3 quinol oxidase subunit III [Lysinibacillus
sphaericus C3-41]
gi|168992875|gb|ACA40415.1| cytochrome aa3 quinol oxidase subunit III [Lysinibacillus
sphaericus C3-41]
Length = 198
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFW+++ ++ ++F F Y VL GP D+F+I+ + T +LL SS +
Sbjct: 21 LGFWVFIGAEIMLFGTLFAAYFVLVDRTGTGPTGADIFEITPVLFETFILLTSSFTIGLG 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A K + +++ ++T G+ FI E+YEF H + + A Q SAF ++ +G
Sbjct: 81 IHA-MRKGYMKAMITFYVLTLLLGVAFIGFEVYEFIHYVHVGAGLQTSAFTATLLTTLGT 139
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV FG+ W +V Q++ +GL + S++WHFLD++WI +FSF+YL G+V
Sbjct: 140 HGAHVTFGVFWGMFIVYQLITRGLTPETANKSFIFSLYWHFLDVVWIFIFSFIYLKGMV 198
>gi|253574492|ref|ZP_04851833.1| quinol oxidase subunit 3 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251846197|gb|EES74204.1| quinol oxidase subunit 3 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 198
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 1/185 (0%)
Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
++ LGFW++L ++ ++FA F Y L +GP ++F+I + T +LL SS
Sbjct: 15 ENSNRVLGFWLFLGAEIVLFATLFSVYLTLWNRTGSGPNGAEIFEIGPVLGETFLLLTSS 74
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
+C A + S L +++ +T G+ F+ +EI EF + A Q SAFLSS
Sbjct: 75 FTCGLA-VHSMRLGLRKPFMAFFAITLLLGLGFLGIEITEFVTYVHEGATMQTSAFLSSL 133
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
F L+G HG HV GL+W L+IQ+ ++G + S++WHFLD++WI +FSFVY
Sbjct: 134 FVLLGTHGAHVTLGLLWGSGLMIQVKREGFTHDTANKSFIFSLYWHFLDVVWIFIFSFVY 193
Query: 206 LMGVV 210
L G++
Sbjct: 194 LKGLM 198
>gi|228899384|ref|ZP_04063645.1| Quinol oxidase subunit 3 [Bacillus thuringiensis IBL 4222]
gi|228860238|gb|EEN04637.1| Quinol oxidase subunit 3 [Bacillus thuringiensis IBL 4222]
Length = 168
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F +Y VL A GP P +F++ + + T++LL SS +C ++ K
Sbjct: 1 MLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI-VIHEMRKHNQK 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
+ W ++T G F+ EI EF I A Q SAFLS+FF L+G HG HV G+IW
Sbjct: 60 AMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGTHGAHVTGGIIW 119
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 120 AICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 167
>gi|126649761|ref|ZP_01721997.1| cytochrome c oxidase subunit III [Bacillus sp. B14905]
gi|126593480|gb|EAZ87425.1| cytochrome c oxidase subunit III [Bacillus sp. B14905]
Length = 208
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 116/196 (59%), Gaps = 9/196 (4%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID-----VFDISGI 74
+++ ++ +GFWI+L + ++FA F TY L KN GPA ++ +F++
Sbjct: 16 PEQATLEGKNKVVGFWIFLACEVVLFASLFATYLAL-KN--KGPAGMEFTTQGLFELPLA 72
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
F T++LL SSL+ +A+ +WL +T G+ F+ +EIYEF H + +
Sbjct: 73 FAMTMLLLTSSLTSVYAIYHMRNFNF-KGMQTWLAITLALGLGFLALEIYEFQHYVHLGF 131
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
+SAF ++F++LVG HG HV GL+W+ L+I+ K+GL N + +++WHF+D
Sbjct: 132 TFNQSAFATAFYSLVGTHGFHVTLGLVWIATLMIRNAKRGLNLYNAPKFFVAALYWHFID 191
Query: 195 LIWICVFSFVYLMGVV 210
++W+ +F+ VYLMGV+
Sbjct: 192 VVWVFIFTVVYLMGVI 207
>gi|228942997|ref|ZP_04105502.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228816661|gb|EEM62781.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 168
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F +Y VL A GP P +F++ + + T++LL SS +C ++ K
Sbjct: 1 MLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI-VIHEMRKHNQK 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
+ W ++T G F+ EI EF I A Q SAFLS+FF L+G HG HV G+IW
Sbjct: 60 AMLGWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGTHGAHVTGGIIW 119
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 120 ATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 167
>gi|196042085|ref|ZP_03109370.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
NVH0597-99]
gi|218901895|ref|YP_002449729.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH820]
gi|228925887|ref|ZP_04088971.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229120350|ref|ZP_04249600.1| Quinol oxidase subunit 3 [Bacillus cereus 95/8201]
gi|229183033|ref|ZP_04310265.1| Quinol oxidase subunit 3 [Bacillus cereus BGSC 6E1]
gi|196027110|gb|EDX65732.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus
NVH0597-99]
gi|218538909|gb|ACK91307.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH820]
gi|228600490|gb|EEK58078.1| Quinol oxidase subunit 3 [Bacillus cereus BGSC 6E1]
gi|228663160|gb|EEL18750.1| Quinol oxidase subunit 3 [Bacillus cereus 95/8201]
gi|228833902|gb|EEM79455.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 168
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F +Y VL A GP P +F++ + + T++LL SS +C A + K
Sbjct: 1 MLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA-IHEMRKHNQK 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
+ W ++T G F+ EI EF A Q SAFLS FF L+G HG HV G+IW
Sbjct: 60 AMLGWFILTLLLGAGFLFFEIEEFIIYAGKGATIQTSAFLSGFFVLLGTHGAHVTGGIIW 119
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++IQILK+GL R++ +S++WHFLD +WI +++ VYL G+V
Sbjct: 120 AICVIIQILKRGLTPVTARKVFIISLYWHFLDFVWIFIYTLVYLNGMV 167
>gi|228919551|ref|ZP_04082915.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228944451|ref|ZP_04106824.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229137498|ref|ZP_04266108.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST26]
gi|229154401|ref|ZP_04282520.1| Quinol oxidase subunit 3 [Bacillus cereus ATCC 4342]
gi|229195024|ref|ZP_04321801.1| Quinol oxidase subunit 3 [Bacillus cereus m1293]
gi|228588459|gb|EEK46500.1| Quinol oxidase subunit 3 [Bacillus cereus m1293]
gi|228629049|gb|EEK85757.1| Quinol oxidase subunit 3 [Bacillus cereus ATCC 4342]
gi|228645945|gb|EEL02169.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST26]
gi|228815353|gb|EEM61601.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228840194|gb|EEM85471.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 168
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F +Y VL A GP P +F++ + + T++LL SS +C ++ K
Sbjct: 1 MLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGI-VIHEMRKHNQK 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
+ W ++T G F+ EI EF I A Q SAFLS FF L+G HG HV G+IW
Sbjct: 60 AMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGTHGAHVTGGIIW 119
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V
Sbjct: 120 AICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 167
>gi|229089762|ref|ZP_04221022.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-42]
gi|228693570|gb|EEL47273.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-42]
Length = 168
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F +Y VL A GP P +F++ + + T++LL SS +C A + K
Sbjct: 1 MLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA-IHEMRKHNQK 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
+ W ++T G F+ EI EF A Q SAFLS FF L+G HG HV G+IW
Sbjct: 60 AMLGWFILTLLLGAGFLFFEIEEFIIYAGKGATLQTSAFLSGFFVLLGTHGAHVTGGIIW 119
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++IQILK+GL R++ +S++WHFLD +WI +++ VYL G+V
Sbjct: 120 AICVIIQILKRGLTPVTARKVFIISLYWHFLDFVWIFIYTLVYLNGMV 167
>gi|299534636|ref|ZP_07047968.1| cytochrome c oxidase subunit 3 [Lysinibacillus fusiformis ZC1]
gi|298730009|gb|EFI70552.1| cytochrome c oxidase subunit 3 [Lysinibacillus fusiformis ZC1]
Length = 208
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 116/196 (59%), Gaps = 9/196 (4%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID-----VFDISGI 74
+++ ++ +GFWI+L + ++FA F TY L KN GPA ++ +F++
Sbjct: 16 PEQATMEGKNKVVGFWIFLACEVVLFASLFATYLAL-KN--KGPAGMEFTTQGLFELPLA 72
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
F T++LL SSL+ +A+ +WL +T G+ F+ +EIYEF H + +
Sbjct: 73 FAMTMLLLTSSLTSVYAIYHMRNFNF-KGMQTWLAITLALGLGFLALEIYEFNHYVHLGF 131
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
+SAF ++F++LVG HG HV GL+W+ L+I+ K+GL N + +++WHF+D
Sbjct: 132 TFNQSAFATAFYSLVGTHGFHVTLGLVWIGTLMIRNAKRGLNLYNAPKFFVAALYWHFID 191
Query: 195 LIWICVFSFVYLMGVV 210
++W+ +F+ VYLMGV+
Sbjct: 192 VVWVFIFTVVYLMGVI 207
>gi|229918524|ref|YP_002887170.1| Cytochrome-c oxidase [Exiguobacterium sp. AT1b]
gi|229469953|gb|ACQ71725.1| Cytochrome-c oxidase [Exiguobacterium sp. AT1b]
Length = 208
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 6/195 (3%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI---DVFDISGIF 75
+ +++ ++ Y+ FW +L + ++FA F TY +G + P + ++F++ +F
Sbjct: 16 NPEKATLEGKNKYVAFWFFLGGETVLFASLFGTY--VGLLNSGAPEELRSYNIFEMELVF 73
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
+ T++LL SSL+ AM+ + WL+VT G F+ EIYEF H +
Sbjct: 74 IMTMLLLTSSLTSVLAMMNMKANN-PGRMKLWLIVTLLLGAGFLGAEIYEFIHYYHIGHT 132
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
SAF S+F+ LVG HG HV FGL+W+ L+I+ + + N + S++WHF+D+
Sbjct: 133 FTSSAFGSAFYTLVGFHGAHVTFGLLWITTLLIRNWNRPIDVYNAPKFYVSSLYWHFIDV 192
Query: 196 IWICVFSFVYLMGVV 210
+W+ +FS VYL+G+V
Sbjct: 193 VWVFIFSIVYLLGMV 207
>gi|198282919|ref|YP_002219240.1| heme/copper-type cytochrome/quinol oxidase subunit 3-like protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665051|ref|YP_002425122.1| cytochrome o ubiquinol oxidase, subunit III [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247440|gb|ACH83033.1| heme/copper-type cytochrome/quinol oxidase subunit 3-like protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517264|gb|ACK77850.1| cytochrome o ubiquinol oxidase, subunit III [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 211
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 4/210 (1%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--KN 58
MS P + + K + V T+ G+++YL+SD ++FA F Y VL +
Sbjct: 1 MSSHTSNVDPKTAELWDKSHYQHDVISTRTF-GYFMYLLSDGMLFATLFAAYGVLSYQHS 59
Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118
Y GP P D F T+ L +S L+ F M A K ++ LL FG++F
Sbjct: 60 YFGGPTPADFVKPWYTFAQTMALFVSVLAYGFGMNALKHKNK-SAVINGLLAAFVFGVLF 118
Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178
+ ++I++ L S+ S +S+F L +H HVFFGLIW+ V++ Q+L KG +
Sbjct: 119 LALDIHDMTQLASLGITVATSGGISAFIILTQVHAAHVFFGLIWILVMMAQVLTKGFTTE 178
Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
RL+ L MFWH +IW+ VF FVYL G
Sbjct: 179 VVGRLLTLRMFWHLQAIIWVFVFVFVYLWG 208
>gi|54296267|ref|YP_122636.1| cytochrome o ubiquinol oxidase subunit III cyoC [Legionella
pneumophila str. Paris]
gi|53750052|emb|CAH11444.1| Cytochrome o ubiquinol oxidase subunit III cyoC [Legionella
pneumophila str. Paris]
Length = 198
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 26 DHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84
D D T + GFW+Y+++DC++F F T+ VL GPA + ++ + + T +LL+S
Sbjct: 14 DSDSTDVFGFWMYILTDCILFGCLFATFLVLNNPGYPGPALKNYVNLHDVLIETFLLLIS 73
Query: 85 SLSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
+ + A+L KR HK WL +T G FI ME+ EF H+ + S +S
Sbjct: 74 NFTFCLAILNLYQDKR--HKVQLWLGITFLLGAGFISMEVTEFIHMANEGFRWDVSGAIS 131
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
SFF LVG HGLHV FGL+W+ +++IQ+ L +RR+ L +FW+FLD++WI VF+
Sbjct: 132 SFFTLVGTHGLHVGFGLLWILIIIIQLPLIKLNHVKRRRMTYLGLFWNFLDIVWIFVFTI 191
Query: 204 VYLMGVV 210
VYLMG +
Sbjct: 192 VYLMGAI 198
>gi|319649712|ref|ZP_08003868.1| cytochrome c oxidase subunit III [Bacillus sp. 2_A_57_CT2]
gi|317398874|gb|EFV79556.1| cytochrome c oxidase subunit III [Bacillus sp. 2_A_57_CT2]
Length = 209
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 4/195 (2%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI--DVFDISGIFV 76
++ ++ +LGFW +L + ++FA F TY L + + D+F+I F+
Sbjct: 15 SPEKQTLEAKNKFLGFWFFLGGETVLFASLFATYLALKDKVPSSDMALAKDLFEIPLAFI 74
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAV 135
T++LL SSL+ +AM K WL +T G+ F+ +EIYEF H +
Sbjct: 75 MTMLLLTSSLTSVYAMYHMKNFNF-KKMQLWLGITVLLGLGFLGLEIYEFNHYVHEFHHS 133
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
SAF S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D+
Sbjct: 134 FTSSAFGSAFYTLVGFHGGHVAFGLLWITTLMIRNSKRGLSLYNAPKFYVASLYWHFIDV 193
Query: 196 IWICVFSFVYLMGVV 210
+W+ +F+ VYLMG+V
Sbjct: 194 VWVFIFTVVYLMGMV 208
>gi|289807960|ref|ZP_06538589.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 103
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 70/93 (75%)
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
+ +SWL +T FG FI MEIYEF HLI P RS FLS+FFALVG HGLHV GLIW
Sbjct: 11 QVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIW 70
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+
Sbjct: 71 MAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDV 103
>gi|222150984|ref|YP_002560137.1| cytochrome c oxidase subunit III [Macrococcus caseolyticus
JCSC5402]
gi|222120106|dbj|BAH17441.1| cytochrome c oxidase subunit III [Macrococcus caseolyticus
JCSC5402]
Length = 209
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI--DVFDISGIFVST 78
+ + ++ LGFWI+L + +FA F TY L + + + D+F + FV T
Sbjct: 18 ETASLEGKNKLLGFWIFLGGETALFASLFATYLALKDHVPSEDHLLAKDLFHLPLAFVMT 77
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++LL SSL+ +A L K ++WL++T G+ F+ +EIYEF + +
Sbjct: 78 MLLLTSSLTSVYA-LYHMKNYDFKKMITWLIITVLLGLGFLGLEIYEFVEYVHKGHTFRS 136
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
SAF S+F+ LVG HG HV GL W+ +L+++ +K+GL N + +++WHF+D++W+
Sbjct: 137 SAFGSAFYFLVGTHGFHVIIGLTWIILLIVRNMKRGLSVYNAAKFNTAALYWHFIDVVWV 196
Query: 199 CVFSFVYLMGVV 210
+F+ VYL+GV+
Sbjct: 197 FIFTVVYLLGVL 208
>gi|319654029|ref|ZP_08008121.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. 2_A_57_CT2]
gi|317394222|gb|EFV74968.1| cytochrome aa3 quinol oxidase subunit III [Bacillus sp. 2_A_57_CT2]
Length = 198
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
LGFWI+L ++ +F F +Y L +GP ++F+I+ + + TI+LL SS +
Sbjct: 21 LGFWIFLGAEIALFGTLFASYFTLVDRTGSGPTGAEIFEITPVLIETILLLTSSFTIGLG 80
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A + +++ +T G+ F+ +EIY+F I A Q S F + F +G
Sbjct: 81 IHAMRLGK-AKAMITFFAITLLLGLGFLGVEIYDFIVYIHEGATLQTSGFTAILFLTLGT 139
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
HG HV FGL W +++Q++K+GL + S++WHFLD++WI +FSFV+L G++
Sbjct: 140 HGAHVTFGLFWGAFIILQVIKRGLTPETANKAFIFSLYWHFLDVVWIFIFSFVFLKGMM 198
>gi|255020823|ref|ZP_05292879.1| Cytochrome O ubiquinol oxidase subunit III [Acidithiobacillus
caldus ATCC 51756]
gi|254969614|gb|EET27120.1| Cytochrome O ubiquinol oxidase subunit III [Acidithiobacillus
caldus ATCC 51756]
Length = 212
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 3/179 (1%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLG--KNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
LGF++YL+SD ++FA F Y VL +Y GP P D F TI L LS L+
Sbjct: 32 LGFFLYLLSDGMIFATLFAAYGVLSYQHSYFGGPTPADFVKPWYTFSQTIALFLSVLAYG 91
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
M A +R ++ LL G++F++++I++ L + S +S+F L
Sbjct: 92 MGMTA-LKRRSRGGLINGLLGAFVLGVLFLVLDIHDVLDLAAHGITVATSGGISAFIVLT 150
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
+H H+FFGL+W+ V++ Q+L+ G + RL+ L MFWHF ++W+ V+ FVYL G
Sbjct: 151 QVHAAHIFFGLLWILVMIYQVLRLGFTADTVGRLLSLRMFWHFQAVVWVFVYIFVYLWG 209
>gi|229025387|ref|ZP_04181805.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1272]
gi|228735972|gb|EEL86549.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1272]
Length = 169
Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 100/169 (59%), Gaps = 2/169 (1%)
Query: 43 LMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
++FA F TY L + GP ++F + +F+ T++LL SSL+ +AM
Sbjct: 1 MLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMTMLLLTSSLTSVYAMYHMKNFNF-K 59
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVPQRSAFLSSFFALVGLHGLHVFFGLI 161
K WLLVT G+ F+ EIYEF H + + SAF S+F+ALVG HGLHV FGL
Sbjct: 60 KMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMRSSAFGSAFYALVGTHGLHVLFGLC 119
Query: 162 WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
W+ L+ + K+GL N + S++WHF+D++W+ +F+ VYLMG+V
Sbjct: 120 WILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWVFIFTVVYLMGMV 168
>gi|226225912|ref|YP_002760018.1| cytochrome c oxidase subunit III [Gemmatimonas aurantiaca T-27]
gi|226089103|dbj|BAH37548.1| cytochrome c oxidase subunit III [Gemmatimonas aurantiaca T-27]
Length = 230
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 24/203 (11%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVF-------------DISGI 74
D + W ++ S+C++FA TY + GP P +V+ +I
Sbjct: 28 DNRKIAIWTFIGSECMLFASLISTYLIYKGRSPEGPYPHEVWTNPATGQVFKPILNIPVT 87
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVS----------WLLVTAFFGMIFIIMEIY 124
ST VLL+SSL+ A LA+ R + KT + WL +T G++F+ + Y
Sbjct: 88 SASTFVLLMSSLAMVLA-LAAVQNRHVPKTTTGERILGNSKLWLWMTCLLGIVFLGCQAY 146
Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184
EF I + + F SSFF L G HG HV G+IWLF L+ K+GL + +
Sbjct: 147 EFTSFIHEGLTIRTNLFGSSFFTLTGFHGAHVTAGVIWLFTLLAIDYKRGLEPKDSLLVD 206
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+++WHF+D+IWI +F+ VYL+
Sbjct: 207 IAALYWHFVDVIWIVIFTLVYLI 229
>gi|269837612|ref|YP_003319840.1| cytochrome c oxidase subunit III [Sphaerobacter thermophilus DSM
20745]
gi|269786875|gb|ACZ39018.1| cytochrome c oxidase subunit III [Sphaerobacter thermophilus DSM
20745]
Length = 208
Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLA 94
W +L SDC+ F +TY V GP P DVF+I VS VLLLSSL+ A+
Sbjct: 35 WTFLASDCMFFGSLIMTYMVYRGRSLNGPYPDDVFNIPFTSVSAAVLLLSSLTMVLAL-- 92
Query: 95 SATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHG 153
SA +R K W+L TA G++F+ + YEF + + F SSFF L G+HG
Sbjct: 93 SALQRGKIKVFRVWILATALLGLLFLGGQYYEFTEFSHLGLGLGTNVFGSSFFVLTGIHG 152
Query: 154 LHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
HV G+IWL L + + N ++ ++WHF+D++WI +F+FVYL+
Sbjct: 153 THVGLGIIWLLTLFAFSFRGLVRQDNAEKVEIAGLYWHFVDIVWIVIFTFVYLL 206
>gi|255019615|ref|ZP_05291696.1| Cytochrome O ubiquinol oxidase subunit III [Acidithiobacillus
caldus ATCC 51756]
gi|254970959|gb|EET28440.1| Cytochrome O ubiquinol oxidase subunit III [Acidithiobacillus
caldus ATCC 51756]
Length = 211
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 4/210 (1%)
Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--KN 58
MS + P+ + +D V T+ GFW+Y++SD ++FA F Y VL +
Sbjct: 1 MSHAETVVDPDKVRLWSEDYDGHDVISTRTF-GFWMYVLSDAMLFATLFAAYGVLSYPHS 59
Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118
Y GP P F T+ L LS L +AM S + ++ LL G++F
Sbjct: 60 YYTGPTPAQFVTPWYTFTQTMALFLSVLIYGWAM-TSLKEGNKSGVINGLLGALVLGVLF 118
Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178
+ ++I++ LI+ P+ S LS+F+ L +H H+F GLIW+ V++ Q+ +KG+
Sbjct: 119 LALDIHDVMRLIAAGITPEVSGGLSAFYCLTQVHAAHIFAGLIWIVVMLWQVARKGVTED 178
Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
RLI L MFW F ++W+ ++ FVYL G
Sbjct: 179 VVGRLISLRMFWQFQAVMWVFIYVFVYLWG 208
>gi|116515213|ref|YP_802842.1| CyoC [Buchnera aphidicola str. Cc (Cinara cedri)]
gi|116257067|gb|ABJ90749.1| cytochrome o ubiquinol oxidase subunit III [Buchnera aphidicola
str. Cc (Cinara cedri)]
Length = 194
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKN-YAAGPAPIDVFDISGIFV 76
KD + + LGFWIYLMSDC++F+V F+ + ++ ++ Y +F +F+
Sbjct: 5 KDYVSYSSLKNNSILGFWIYLMSDCIIFSVLFIVHIIMSRHGYNGFLRENKLFSKFVLFL 64
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLL-VTAFFGMIFIIMEIYEFAHLISMEAV 135
T++LL SLS F+++ K+ K + + L +T G FI +E +EF ++I
Sbjct: 65 ETLILLFCSLS--FSLIKYFLKKSYKKCILFFLFITLILGSTFISLEFFEFLNIIEKGFF 122
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
P + + SSF+ L+ +HGLHV FGL+W+ + + Q + LIC +FWHFLD+
Sbjct: 123 PNTNGYFSSFYVLLCIHGLHVIFGLLWIIISIFQFFFLKFSNFLYISLICCCLFWHFLDI 182
Query: 196 IWI 198
IWI
Sbjct: 183 IWI 185
>gi|262279559|ref|ZP_06057344.1| LOW QUALITY PROTEIN: cytochrome o ubiquinol oxidase subunit III
[Acinetobacter calcoaceticus RUH2202]
gi|262259910|gb|EEY78643.1| LOW QUALITY PROTEIN: cytochrome o ubiquinol oxidase subunit III
[Acinetobacter calcoaceticus RUH2202]
Length = 74
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 58/74 (78%)
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SAFLSSFF LVG HG+HV GL+W+ VL+ QI K GL N RRL CLS+FWHFLD++
Sbjct: 1 THSAFLSSFFTLVGTHGIHVTSGLVWMLVLMYQIKKNGLTLPNTRRLACLSLFWHFLDIV 60
Query: 197 WICVFSFVYLMGVV 210
WICVFS VYLMGV+
Sbjct: 61 WICVFSVVYLMGVL 74
>gi|182413887|ref|YP_001818953.1| cytochrome c oxidase subunit III [Opitutus terrae PB90-1]
gi|177841101|gb|ACB75353.1| cytochrome c oxidase subunit III [Opitutus terrae PB90-1]
Length = 204
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFVSTIVLLLSSLSCSFAML 93
W +L SDC+ F ++ + AG P+P ++FD+ ST +LL+SSL + A+
Sbjct: 28 WAFLASDCMFFGTLIASHLIYRLYPPAGTPSPKEIFDLPLTSFSTFILLMSSLMMALAVN 87
Query: 94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL-SSFFALVGLH 152
A + S LL TAFFG IF+ ++YEF H + + + + L S+F+ L G H
Sbjct: 88 AIQKGNVRSMRFS-LLTTAFFGAIFLGCQVYEFTHFVHEKGLTITGSILGSTFYTLTGTH 146
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
GLHV G+IWL + + + + + ++WHF+D++WI +F+ VYL+
Sbjct: 147 GLHVLIGVIWLMSMYLYSFTGRVTQKEAIDVESMGLYWHFVDIVWIVIFTAVYLL 201
>gi|167581213|ref|ZP_02374087.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis TXDOH]
Length = 126
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
SS++ FAM+ A KR WL VT G F+ ME+ EF+HLI+ A P
Sbjct: 75 SSITYGFAMI-GAHKRRRGAVFGWLAVTFVLGAAFLAMELREFSHLIAEGAGP 126
>gi|221632719|ref|YP_002521940.1| CoxC [Thermomicrobium roseum DSM 5159]
gi|221156906|gb|ACM06033.1| CoxC [Thermomicrobium roseum DSM 5159]
Length = 201
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 3/202 (1%)
Query: 6 IGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP 65
+G S + + + H+ L W +L SDC+ F Y Y P P
Sbjct: 1 MGHSVTAQAHPAGEHTTTGISHN--RLMMWTFLASDCMFFVSLIWVYFAYRGRYFEPPYP 58
Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125
DV DI VS VLLLSS + + L + + + WLL T G +F+ + YE
Sbjct: 59 RDVLDIPYTSVSAAVLLLSSFAIVMS-LTALERGDMRGFRGWLLGTILLGALFLGGQYYE 117
Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185
F + F ++FF L G HG HVF G++WL V + L L + + R
Sbjct: 118 FTTFYHEGLTLTSNLFGTTFFVLTGFHGTHVFIGIVWLLVQWLLSLFGKLTTAHVERFFV 177
Query: 186 LSMFWHFLDLIWICVFSFVYLM 207
+++WHF+D++WI +F VYLM
Sbjct: 178 TTLYWHFVDIVWIVIFMLVYLM 199
>gi|156743494|ref|YP_001433623.1| cytochrome c oxidase subunit III [Roseiflexus castenholzii DSM
13941]
gi|156234822|gb|ABU59605.1| cytochrome c oxidase subunit III [Roseiflexus castenholzii DSM
13941]
Length = 203
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLS 84
D LG W ++ S+ L FA TY V A P P + DI V +LL S
Sbjct: 22 DNRKLGVWAFIGSETLFFATLITTYFVFAPVNRARPDFQDPREFLDIELTTVLASILLAS 81
Query: 85 SLSCSFAMLASATKRLIHKT-VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SL+ A+ SA+KR + +WLL T G+ FI ++YEF HL S F +
Sbjct: 82 SLTMVLAL--SASKRGDRRWFTTWLLATVGLGLAFIGGQVYEFNHLYHEGLTLSSSLFGT 139
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
+FF L G HG HV G+IWL + ++ N + ++WHF+DL+W+ +F
Sbjct: 140 TFFVLTGFHGTHVAIGVIWLLSVFFKVRTYPNSPENAMDVEIAGLYWHFVDLVWVAIFVL 199
Query: 204 VYLM 207
VYL+
Sbjct: 200 VYLI 203
>gi|297625014|ref|YP_003706448.1| cytochrome c oxidase subunit III [Truepera radiovictrix DSM 17093]
gi|297166194|gb|ADI15905.1| cytochrome c oxidase subunit III [Truepera radiovictrix DSM 17093]
Length = 203
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75
+ + + S D L WI+L SDC+ FA TY V GP P ++ DI
Sbjct: 13 HAEHRSTSLSDRK---LLMWIFLASDCMFFAALIGTYLVYKGRSLVGPYPTEILDIPLTT 69
Query: 76 VSTIVLLLSSLSCSFAMLASATKRL--IHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
+ST VLL+SS +LA RL I K W L FG IF+ ++YEF+H +
Sbjct: 70 ISTFVLLMSSF---LMVLALHAIRLGDIPKFRLWTLGVCLFGSIFLGFQVYEFSHFVHEG 126
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
QR+ F ++FF L G HG+HV G++WL L+I + + + + + ++WHF+
Sbjct: 127 LTLQRNLFGTTFFTLTGTHGIHVSVGVLWLLSLLITSYVRPMSAKDALGVEIAGLYWHFV 186
Query: 194 DLIWICVFSFVYLM 207
D++WI +F+ VYL+
Sbjct: 187 DIVWIVIFTAVYLV 200
>gi|148656389|ref|YP_001276594.1| cytochrome c oxidase subunit III [Roseiflexus sp. RS-1]
gi|148568499|gb|ABQ90644.1| cytochrome c oxidase, subunit III [Roseiflexus sp. RS-1]
Length = 202
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLS 84
D LG W ++ S+ L FA TY V A P P + DI V +LL S
Sbjct: 21 DNRKLGVWAFIGSETLFFATLITTYFVFAPVNRARPDFQDPREFLDIELTTVLASILLAS 80
Query: 85 SLSCSFAMLASATKRLIHKT-VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
SL+ A+ SA++R ++ +WLL T G+ FI + YEF HL S F +
Sbjct: 81 SLTMVLAL--SASRRGDRRSFTTWLLATVGLGLAFIGGQAYEFNHLYHEGLTLSSSLFGT 138
Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
+FF L G HG HV G+IWL + ++ N + ++WHF+DL+W+ +F
Sbjct: 139 TFFVLTGFHGTHVAIGVIWLLSVFFKVRAYPDSPENVMDVEIAGLYWHFVDLVWVAIFVL 198
Query: 204 VYLM 207
VYL+
Sbjct: 199 VYLI 202
>gi|297566737|ref|YP_003685709.1| cytochrome c oxidase subunit III [Meiothermus silvanus DSM 9946]
gi|296851186|gb|ADH64201.1| cytochrome c oxidase subunit III [Meiothermus silvanus DSM 9946]
Length = 225
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 25/193 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYA---VLGKNYAAGPAPIDVFDIS---------GIFVSTIVLL 82
WI+L+SD +F F +YA + + P+P +VF + I + T+VL+
Sbjct: 36 WIFLLSDTFIFGSFITSYASARLAASATNSWPSPKEVFALRIGETEVPLLLIAIMTVVLI 95
Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI---------SME 133
SS + + A+ + KR + +T ++++TA G+ F+ M+ +E+ HLI +
Sbjct: 96 SSSGTMAIAVYHAYAKRKV-QTAIFMVLTALLGLTFVSMQAFEWTHLIVDLGFRPWANPM 154
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
PQ F SSFF L G HGLHV G+I+L + +++LK G+ + ++WHF+
Sbjct: 155 GAPQ---FGSSFFMLTGFHGLHVTIGVIYLTAVAVRVLKGVYDRGSYVGVEICGLYWHFV 211
Query: 194 DLIWICVFSFVYL 206
DL+W+ +F+F YL
Sbjct: 212 DLVWVFIFAFFYL 224
>gi|228941103|ref|ZP_04103659.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228818556|gb|EEM64625.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 144
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
+F + +F+ T++LL SSL+ +AM K WLLVT G+ F+ EIYEF
Sbjct: 1 MFQMPLVFIMTMLLLTSSLTSVYAMYHMKNFNF-KKMQLWLLVTVLLGLGFLGFEIYEFY 59
Query: 128 HLI-SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
H + + SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N +
Sbjct: 60 HYTHEFKHTMRSSAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVA 119
Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210
S++WHF+D++W+ +F+ VYLMG+V
Sbjct: 120 SIYWHFIDVVWVFIFTVVYLMGMV 143
>gi|294054191|ref|YP_003547849.1| cytochrome c oxidase subunit III [Coraliomargarita akajimensis DSM
45221]
gi|293613524|gb|ADE53679.1| cytochrome c oxidase subunit III [Coraliomargarita akajimensis DSM
45221]
Length = 208
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS-- 85
D L W++L SDC+ F T+ + K Y P +F + ST +LL+SS
Sbjct: 19 DNKKLLMWLFLGSDCMFFGTLISTHLIYRKLYPDEFEPTTLFSLELTSFSTFILLMSSFL 78
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145
++ S + + + + VS ++ FFG+IF+ ++YEF+ + + Q F S+F
Sbjct: 79 MALSVSAMHKGQLKSFRRNVSGVI---FFGLIFLGCQVYEFSEFVHHDLTLQTGTFGSTF 135
Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIWICVFSFV 204
F L G+HG+HV G+ WL ++ + + + + ++ ++WHF+D++WI +F+ V
Sbjct: 136 FLLTGIHGVHVAIGVFWLISMLFYSMNGKMDAHESAVDVEVAGLYWHFVDIVWIIIFTAV 195
Query: 205 YLM 207
YL+
Sbjct: 196 YLI 198
>gi|167577011|ref|ZP_02369885.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis TXDOH]
Length = 129
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ + T +LL+
Sbjct: 18 DHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALETALLLV 77
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
SS++ FAM+ + R WL VT G F+ +E+ EF+H+I+ A P
Sbjct: 78 SSITYGFAMIGAQRGRR-GALFGWLAVTFALGAAFLGLELREFSHMIAEGAGP 129
>gi|73537470|ref|YP_297837.1| cytochrome-C oxidase subunit III oxidoreductase protein [Ralstonia
eutropha JMP134]
gi|72120807|gb|AAZ62993.1| probable cytochrome-C oxidase subunit III oxidoreductase protein
[Ralstonia eutropha JMP134]
Length = 231
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 22/191 (11%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V P P +VF D+ + ++ + +L +
Sbjct: 43 WIFLLSDTFVFSCFLTGYMTVRMATTVPWPNPSEVFGLRIGGHDVPLLLIAIMTFVLITS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV---------P 136
S + AM + A +R + +LVTA FG F+ M+ +E+ LI E V P
Sbjct: 103 SGTMAMAVNFAYRRQRRQCALLMLVTALFGATFVCMQAFEWTKLIVEEGVRPWGNPMGAP 162
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDL 195
Q F S+FF + G HGLHV G+I+L ++ ++L+ + ++GN + + ++WHF+DL
Sbjct: 163 Q---FGSTFFMITGFHGLHVSCGVIYLLIVATKVLRGRYEVTGNYQIVEIAGLYWHFVDL 219
Query: 196 IWICVFSFVYL 206
+W+ +F+ YL
Sbjct: 220 VWVFIFALFYL 230
>gi|194292512|ref|YP_002008419.1| cytochrome-c oxidase subunit iii oxidoreductase protein
[Cupriavidus taiwanensis LMG 19424]
gi|193226416|emb|CAQ72365.1| cytochrome-C oxidase subunit III oxidoreductase protein
[Cupriavidus taiwanensis LMG 19424]
Length = 238
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 16/188 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V P P +VF DI + ++ + +L +
Sbjct: 50 WIFLLSDTFVFSCFLTGYMTVRMSTTVPWPNPSEVFALHVGGADIPLLLIAIMTFVLITS 109
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQRSA 140
S + AM + A +R + + + VTA FG++F+ M+ +E+ LI E V P +A
Sbjct: 110 SGTMAMAVNFAYRRARRECATLMFVTAAFGVLFVGMQAFEWTKLIVDEGVRPWSNPMGAA 169
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWI 198
F S+FF + G HGLHV G+I+L V+ ++L+ + +GN + + ++WHF+DL+W+
Sbjct: 170 QFGSTFFMITGFHGLHVSCGVIYLLVVATRVLRGRYEATGNYQIVEIAGLYWHFVDLVWV 229
Query: 199 CVFSFVYL 206
+F+ YL
Sbjct: 230 FIFALFYL 237
>gi|213417283|ref|ZP_03350427.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 130
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+A K + +SWL +T FG FI MEIYEF HLI
Sbjct: 88 IA-MHKNNKSQVISWLALTFLFGAGFIGMEIYEFHHLI 124
>gi|75674965|ref|YP_317386.1| cytochrome o ubiquinol oxidase subunit III [Nitrobacter
winogradskyi Nb-255]
gi|74419835|gb|ABA04034.1| cytochrome bo3 quinol oxidase subunit 3 [Nitrobacter winogradskyi
Nb-255]
Length = 241
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 37/214 (17%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GF + L+SD ++FA+ F + + ++ A + + IF T++LL SS + FA
Sbjct: 29 GFRLCLVSDAIIFALLFAIFIAMTRDAADVSTERPLLRLPRIFPETMLLLASSATLGFAS 88
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
+A+A ++ + WL +T G+ F++ EI E + + A P +S FLS+FF L+G H
Sbjct: 89 IAAAARQRWRAII-WLGLTFVLGLGFVVTEILELYGMAAAHAGPWQSGFLSAFFTLIGAH 147
Query: 153 GLHVFFGLIWLFVLVIQILKKG------------------------------------LI 176
G HV GLIW+ +L ++ +G
Sbjct: 148 GAHVSLGLIWIALLGGELAWRGPALDHDGFGSNRSKTMSVIDSSILERDAGGKPLHTHPA 207
Query: 177 SGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
G RL LS+FWHFL ++WI +F+ VYL G++
Sbjct: 208 PGAVSRLHRLSLFWHFLVIVWISIFALVYLPGLL 241
>gi|150397628|ref|YP_001328095.1| cytochrome c oxidase subunit III [Sinorhizobium medicae WSM419]
gi|150029143|gb|ABR61260.1| cytochrome c oxidase subunit III [Sinorhizobium medicae WSM419]
Length = 240
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISG-----IFVSTIVLLLSSL 86
WI+L+SD +F F + Y + A P P +VF +I G I ++ + +L S
Sbjct: 44 WIFLLSDTFVFGCFLIAYMAARMSTAVPWPNPSEVFALEIGGTHMPLILIAIMTFVLISS 103
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R KT + +L+TA FG F+ M+ +E++ LI+ P +
Sbjct: 104 SGTMAMAVNYGYRRDRRKTAALMLLTALFGAAFVGMQAFEWSKLIAEGVRPWANPWGAAQ 163
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F SSFF + G HG HV FG+I+L ++ ++ + G + + R + ++W
Sbjct: 164 FGSSFFMITGFHGTHVTFGVIFLLIIARKVWRGDFETERPGFFTSRKGRYEIVEITGLYW 223
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 224 HFVDLVWVFIFAFFYL 239
>gi|239818085|ref|YP_002946995.1| cytochrome C oxidase subunit III [Variovorax paradoxus S110]
gi|239804662|gb|ACS21729.1| cytochrome c oxidase subunit III [Variovorax paradoxus S110]
Length = 234
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 16/188 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V P P +VF DI + ++ + +L S
Sbjct: 46 WIFLLSDTFVFSCFLTGYMTVRASTTVPWPNPSEVFALHVGGADIPLLLIAIMTFVLISS 105
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQRSA 140
S + AM + A +R + +LVTA G IF+ M+ +E++ LI E V P +A
Sbjct: 106 SGTMAMAVNFAYRRDRVNAATLMLVTATCGEIFVGMQAFEWSKLILEEGVRPWGNPMGAA 165
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGL-ISGNQRRLICLSMFWHFLDLIWI 198
F S+FF + G HGLHV G+++LF + ++++ SGN + + ++WHF+DL+W+
Sbjct: 166 QFGSAFFMITGFHGLHVSAGVVFLFTVAFKLMRGDYDKSGNYQIVEIAGLYWHFVDLVWV 225
Query: 199 CVFSFVYL 206
+F+ YL
Sbjct: 226 FIFALFYL 233
>gi|167837279|ref|ZP_02464162.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis
MSMB43]
Length = 112
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 26 DHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83
DH ++ GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ + T LLL
Sbjct: 15 DHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTGRDLFDIPGVALETAALLL 74
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
SS++ FAM+ A KR WL VT G F+ ME
Sbjct: 75 SSITYGFAMI-GAHKRQRGAVFGWLAVTFVLGAAFLAME 112
>gi|313621620|gb|EFR92436.1| cytochrome aa3 quinol oxidase, subunit III [Listeria innocua FSL
S4-378]
gi|313625769|gb|EFR95400.1| cytochrome aa3 quinol oxidase, subunit III [Listeria innocua FSL
J1-023]
Length = 176
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 2/153 (1%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSF 90
LGFWI+L ++ +FA F TY V+ K AG P ++F++ + + T +LL SS +C
Sbjct: 24 LGFWIFLGAEIALFATLFATYFVMRKAGSNAGHPPAEMFELWLVLIMTFLLLASSFTCGL 83
Query: 91 AMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVG 150
A + K + + ++T G F+ E+YEFAH ++ Q ++ S+FF L+G
Sbjct: 84 A-IGEMRKGNVKMLTIYSIITLILGAGFVGFELYEFAHYVTEGVTMQIGSYWSAFFVLLG 142
Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183
HGLHV G+ W+ ++IQI GL ++
Sbjct: 143 THGLHVTVGIFWISFILIQIKMHGLTPKTASKV 175
>gi|116695995|ref|YP_841571.1| bb3-type cytochrome oxidase subunit III [Ralstonia eutropha H16]
gi|113530494|emb|CAJ96841.1| similar to bb3-type cytochrome oxidase subunit III [Ralstonia
eutropha H16]
Length = 235
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 16/188 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V P P +VF DI + ++ + +L +
Sbjct: 47 WIFLLSDTFVFSCFLTGYMTVRMSTTVPWPNPSEVFALHVGGADIPLLLIAIMTFVLITS 106
Query: 87 SCSFAMLASATKRLIHKTVSWLL-VTAFFGMIFIIMEIYEFAHLISMEAV-----PQRSA 140
S + AM + R + + L+ VTA FG++F+ M+ +E+ LI E V P +A
Sbjct: 107 SGTMAMAVNFAYRRARRECALLMFVTALFGVMFVGMQAFEWTKLIVDEGVRPWTNPMGAA 166
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWI 198
F S+FF + G HGLHV G+++L ++ ++L+ + +GN + + ++WHF+DL+W+
Sbjct: 167 QFGSTFFMITGFHGLHVSCGVVYLLIVATRVLRGRYEATGNYQIVEIAGLYWHFVDLVWV 226
Query: 199 CVFSFVYL 206
+F+ YL
Sbjct: 227 FIFALFYL 234
>gi|330975782|gb|EGH75848.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae
pv. aptata str. DSM 50252]
Length = 140
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++
Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
FAMLA K + + WL +T G FI ME+YEF HLI P RS
Sbjct: 91 FAMLA-LYKGNKSQVLGWLALTFLCGAAFIGMEVYEFHHLIEEGFGPSRSG 140
>gi|15966272|ref|NP_386625.1| cytochrome-c oxidase protein [Sinorhizobium meliloti 1021]
gi|307307741|ref|ZP_07587470.1| cytochrome c oxidase subunit III [Sinorhizobium meliloti BL225C]
gi|307317401|ref|ZP_07596841.1| cytochrome c oxidase subunit III [Sinorhizobium meliloti AK83]
gi|15075543|emb|CAC47098.1| Cytochrome c oxidase subunit III [Sinorhizobium meliloti 1021]
gi|306896990|gb|EFN27736.1| cytochrome c oxidase subunit III [Sinorhizobium meliloti AK83]
gi|306901607|gb|EFN32209.1| cytochrome c oxidase subunit III [Sinorhizobium meliloti BL225C]
Length = 240
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSL 86
WI+L+SD +F F + Y + P P +VF +I G I ++ + +L S
Sbjct: 44 WIFLLSDTFVFGCFLLAYMSARMSTSVPWPNPSEVFALEIGGTHMPLILIAIMTFVLISS 103
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-----QRSA 140
S + AM + +R KT + +L+TA FG F+ M+ +E++ LI+ P +
Sbjct: 104 SGTMAMAVNYGYRRDRRKTAALMLLTALFGAAFVGMQAFEWSKLIAEGVRPWGNPWGAAQ 163
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F S+FF + G HG HV FG+I+L ++ ++ + +G + + R + ++W
Sbjct: 164 FGSTFFMITGFHGTHVTFGVIFLLIVARKVWRGDFETERRGFFTSRKGRYEIVEITGLYW 223
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 224 HFVDLVWVFIFAFFYL 239
>gi|223937932|ref|ZP_03629831.1| cytochrome c oxidase, subunit I [bacterium Ellin514]
gi|223893333|gb|EEF59795.1| cytochrome c oxidase, subunit I [bacterium Ellin514]
Length = 745
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 8 KSPNFSLFYVKDKKES---CVDHDGTYL-----GFWIYLMSDCLMFAVFFVTYAVLGKNY 59
+ P + L + ++ V+ D YL G W +++S+ FA+ Y +
Sbjct: 534 RRPVWDLMHPENPDPPISGVVNQDSPYLEKNFVGMWSFILSEATFFALLISGYIYYNAYW 593
Query: 60 -AAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMI 117
+ GP + + V T+ LL SSL+ F + R H + WL++T G++
Sbjct: 594 HSTGPDAAAHLNRNLATVFTLFLLASSLT--FWLAEKNLHRGNHHSFRFWLVITILLGLV 651
Query: 118 FIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLIS 177
FI+ + +E+ L + F SSFF L G HGLHV GLI L +++ K S
Sbjct: 652 FIVGQGHEYFDLFRRGVTIDTTLFASSFFTLTGFHGLHVCVGLIGLLIVLWLAFKGDFKS 711
Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
G + + +WHF+D++WI VF+ VYL+G
Sbjct: 712 GRIEAVRTIGFYWHFVDVVWIFVFTTVYLVG 742
>gi|227823093|ref|YP_002827065.1| cytochrome c oxidase, subunit III [Sinorhizobium fredii NGR234]
gi|227342094|gb|ACP26312.1| cytochrome c oxidase, subunit III [Sinorhizobium fredii NGR234]
Length = 240
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSL 86
WI+L+SD +F F + Y + P P +VF +I+G I ++ + +L S
Sbjct: 44 WIFLLSDTFVFGCFLLAYMSARMSTTVPWPNPSEVFALEIAGAHVPLILIAIMTFVLISS 103
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-----QRSA 140
S + AM + +R KT +LVTA FG F+ M+ +E++ LIS P +
Sbjct: 104 SGTMAMAVNCGYRRDRRKTAILMLVTALFGATFVGMQAFEWSKLISEGVRPWGNPWGAAQ 163
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F SSFF + G HG HV G+I+L ++ ++ + +G + + R + ++W
Sbjct: 164 FGSSFFMITGFHGTHVTIGVIFLLIVARKVWRGDYDTERRGFFTSRKGRYEIVEITGLYW 223
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 224 HFVDLVWVFIFAFFYL 239
>gi|91786631|ref|YP_547583.1| cytochrome c oxidase subunit III [Polaromonas sp. JS666]
gi|91695856|gb|ABE42685.1| cytochrome c oxidase, subunit III [Polaromonas sp. JS666]
Length = 236
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 104/189 (55%), Gaps = 18/189 (9%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF--DISG-------IFVSTIVLLLS 84
WI+L+SD +F+ F Y V P P VF + G I + T VL+ S
Sbjct: 48 WIFLLSDTFIFSCFLTGYMTVRVSTTVPWPNPSQVFALHVGGTEVPLLLIAIMTFVLISS 107
Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQRS 139
S + + A+ + + I+ V ++VTA G F+ M+ +E++ LI E V P +
Sbjct: 108 SGTMAMAVNCAYRRDRINAAVL-MIVTATLGETFVAMQAFEWSKLILEEGVRPWGNPMGA 166
Query: 140 A-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIW 197
A F S+FF + G HGLHV G+I+L V+ ++L+ + SGN + + + ++WHF+DL+W
Sbjct: 167 AQFGSAFFMITGFHGLHVTAGVIYLLVVATRLLRGRYEQSGNYQIVEIVGLYWHFVDLVW 226
Query: 198 ICVFSFVYL 206
+ +F+F YL
Sbjct: 227 VFIFAFFYL 235
>gi|209549852|ref|YP_002281769.1| cytochrome C oxidase subunit III [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535608|gb|ACI55543.1| cytochrome c oxidase subunit III [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 239
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y + P P +VF D+ I ++ + +L S
Sbjct: 43 WIFLLSDTFVFGCFLIAYMTARMSTPVPWPNPSEVFALHIGGQDVPLILIAIMTFVLISS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R HKT +L+TA G F+ M+ +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRDRHKTAVLMLLTALLGACFVGMQAFEWTKLITEGVRPWENPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F S+FF + G HG HV G+I+L + ++ + +G + + R + + ++W
Sbjct: 163 FGSTFFMITGFHGTHVTIGVIFLIITARKVWRGDFDVERRGFFTSRRGRYEAVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|21220628|ref|NP_626407.1| cytochrome c oxidase subunit III [Streptomyces coelicolor A3(2)]
gi|289772124|ref|ZP_06531502.1| cytochrome c oxidase subunit III [Streptomyces lividans TK24]
gi|62900050|sp|Q9X809|COX3_STRCO RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|4539220|emb|CAB39878.1| cytochrome c oxidase subunit III [Streptomyces coelicolor A3(2)]
gi|289702323|gb|EFD69752.1| cytochrome c oxidase subunit III [Streptomyces lividans TK24]
Length = 206
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G ++ + A D +I +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPDFWSEKA--DALNIPFSATNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W +VT G IFI +++E+ L+ E + S + S+
Sbjct: 83 LTCQLGVFA-AERGDVKKLRMWFIVTFVMGAIFIGGQVFEYTELVKHEGISLSSDPYGSA 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL + I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+YL+
Sbjct: 202 IYLI 205
>gi|323158302|gb|EFZ44375.1| cytochrome o ubiquinol oxidase subunit 3 domain protein
[Escherichia coli E128010]
Length = 104
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATK 98
MSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A +A K
Sbjct: 1 MSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIA-MYK 59
Query: 99 RLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143
+ +SWL +T FG FI MEIYEF HLI P RS FLS
Sbjct: 60 NNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLS 104
>gi|169826977|ref|YP_001697135.1| cytochrome c oxidase subunit 3 [Lysinibacillus sphaericus C3-41]
gi|168991465|gb|ACA39005.1| Cytochrome c oxidase subunit 3 [Lysinibacillus sphaericus C3-41]
Length = 178
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 9/160 (5%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID-----VFDISGIF 75
+++ ++ +GFWI+L + ++FA F TY L KN GPA ++ +F++ F
Sbjct: 17 EQATLEGKNKVVGFWIFLACEVVLFASLFATYLAL-KN--KGPAGMEFTTQGLFELPLAF 73
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
T++LL SSL+ +A+ +WL +T G+ F+ +EIYEF H + +
Sbjct: 74 AMTMLLLTSSLTSVYAIYHMRNFNF-KGMQTWLAITLALGLGFLALEIYEFQHYVHLGFT 132
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGL 175
+SAF ++F++LVG HG HV GL+W+ L+I+ K+GL
Sbjct: 133 FNQSAFATAFYSLVGTHGFHVTLGLVWIATLMIRNAKRGL 172
>gi|324998039|ref|ZP_08119151.1| cytochrome c oxidase, subunit III [Pseudonocardia sp. P1]
Length = 202
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPI 66
+PN S + + V +G ++L S+ + FA F Y +N P P
Sbjct: 7 AAPNISARIHSLNRPNLVS-----IGTIVWLSSELMFFAGLFAMYFTARAQNDGPWPPPP 61
Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126
++ TIVL+ SS +C F + A A + + W L+T G F++ + YE+
Sbjct: 62 THLNVPYALAITIVLVASSFTCQFGVFA-AERGDVFGLRRWYLLTLAMGTFFVVGQAYEY 120
Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
L+ S++ + F+ G HGLHV GL+ L+I+ I +
Sbjct: 121 YELVETGTTMAASSYGTVFYMATGFHGLHVIGGLVAFVYLIIRTRLSKFTPAQATAAIVV 180
Query: 187 SMFWHFLDLIWICVFSFVYLM 207
S +WHF+D++WI +F+ +Y +
Sbjct: 181 SYYWHFVDVVWIGLFAVIYFI 201
>gi|134094349|ref|YP_001099424.1| cytochrome-C oxidase subunit III oxidoreductase protein
[Herminiimonas arsenicoxydans]
gi|133738252|emb|CAL61297.1| Cytochrome-c oxidase [Herminiimonas arsenicoxydans]
Length = 230
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V AA P P +VF D+ + ++ + +L S
Sbjct: 43 WIFLLSDTFIFSCFLTGYMTVRLTTTAAWPNPSEVFSLNIGGTDMPLLLIAIMTFVLISS 102
Query: 87 SCSFAMLASATKRLIHKTVSWL-LVTAFFGMIFIIMEIYEFAHLISMEAVP-----QRSA 140
S + AM + R T L L TA G F+ M+ +E++ LI+ P +
Sbjct: 103 SGTMAMAVNYAYRRNRVTTGILMLATALLGASFVGMQAFEWSKLIAEGVRPWGNPMGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWIC 199
F S+FF + G HGLHV G+I+L ++ ++L+ + +GN + + ++WHF+DL+W+
Sbjct: 163 FGSTFFMITGFHGLHVSAGVIYLVIVASRVLRGRYEKTGNYQIVEIAGLYWHFVDLVWVF 222
Query: 200 VFSFVYL 206
+F+ YL
Sbjct: 223 IFALFYL 229
>gi|87312213|ref|ZP_01094315.1| cytochrome C oxidase subunit III [Blastopirellula marina DSM 3645]
gi|87285089|gb|EAQ77021.1| cytochrome C oxidase subunit III [Blastopirellula marina DSM 3645]
Length = 203
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76
+ ES +G +L S+ F+ V Y + GP P + ++ +
Sbjct: 12 IPPPVESEFPLSPAQVGMATFLCSEAAFFSTLVVAYLIYLGEDQTGPTPAESLSLTRAVI 71
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
++ LL SS + AM A K L +V W+ T G++F++ YE+ LI + +
Sbjct: 72 NSAFLLGSSGTIMLAMNARKAKSLNGFSV-WMFGTITLGVLFLVGTAYEWEELIYQDGLT 130
Query: 137 -QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
R+ F ++F+ L+G H HV GL+ L V+ + + G +S +S +WHF+D
Sbjct: 131 IGRNLFGTTFYTLIGFHAFHVTLGLVLLTVITF-LERAGRLSAKSEATELVSWYWHFVDA 189
Query: 196 IWICVFSFVYLMGV 209
+WI +F VY MG
Sbjct: 190 VWIVIFGVVYWMGT 203
>gi|145296154|ref|YP_001138975.1| hypothetical protein cgR_2074 [Corynebacterium glutamicum R]
gi|140846074|dbj|BAF55073.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 217
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L + + FA F Y V N A + D ++ + T++L+ SS++C
Sbjct: 39 VGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWGEQTDHLNVPYALLITVILVSSSVTC 98
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
F + A A + ++ W LVT G IF+I + YE+ L+ Q S + S+FF
Sbjct: 99 QFGVFA-AERGDVYGLRKWFLVTIILGSIFVIGQAYEYITLVGHGLTIQSSVYGSAFFIT 157
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G H LHV G+I V++++I K + +S +WHF+D++WI +F +Y +
Sbjct: 158 TGFHALHVIAGVIAFVVVLMRIQKSKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFI 216
>gi|254390607|ref|ZP_05005821.1| cytochrome c oxidase subunit III [Streptomyces clavuligerus ATCC
27064]
gi|294812204|ref|ZP_06770847.1| Probable cytochrome c oxidase subunit 3 [Streptomyces clavuligerus
ATCC 27064]
gi|326440641|ref|ZP_08215375.1| cytochrome c oxidase subunit III [Streptomyces clavuligerus ATCC
27064]
gi|197704308|gb|EDY50120.1| cytochrome c oxidase subunit III [Streptomyces clavuligerus ATCC
27064]
gi|294324803|gb|EFG06446.1| Probable cytochrome c oxidase subunit 3 [Streptomyces clavuligerus
ATCC 27064]
Length = 205
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 32 LGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G I+L S+ + FA F Y +V G Y + A + F S +T +L+LSSL+
Sbjct: 27 VGTIIWLSSELMFFAALFAMYFTLRSVTGAEYWSSRADLLNFPFS--MTNTTILVLSSLT 84
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
C + A A + + K +W ++T G IF+ ++YE+ L+ + S F+
Sbjct: 85 CQLGVFA-AERGDVKKLRTWFIITFVMGAIFVGGQVYEYTELVQHGVTLSSDPYGSVFYL 143
Query: 148 LVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
G HGLHV GLI +L VL + I +S +WHF+D++WI +F+ +YL
Sbjct: 144 TTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATSAIVVSYYWHFVDVVWIGLFATIYL 203
Query: 207 M 207
+
Sbjct: 204 I 204
>gi|307294180|ref|ZP_07574024.1| cytochrome c oxidase subunit III [Sphingobium chlorophenolicum L-1]
gi|306880331|gb|EFN11548.1| cytochrome c oxidase subunit III [Sphingobium chlorophenolicum L-1]
Length = 227
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 16/188 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V P +VF DI + ++ + L S
Sbjct: 39 WIFLLSDTFIFSCFLTGYMTVRASATLPWPNTAEVFALNIGGQDIPLVLIAIMTFALISS 98
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS------ 139
S + AM + +R KT + +L+TA FG+ F+ M+ +E++ LI E V S
Sbjct: 99 SGTMAMAVNFGYQRDRRKTTALMLLTALFGLTFLGMQAFEWSKLIFEEGVRPWSNPMGAP 158
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGL-ISGNQRRLICLSMFWHFLDLIWI 198
F ++FF + G HGLHV G+I L ++ ++ + SG+ + ++WHF+DL+W+
Sbjct: 159 QFGAAFFMITGFHGLHVTCGVILLLIIASKVARGHYDKSGDYSAVEIAGLYWHFVDLVWV 218
Query: 199 CVFSFVYL 206
+F+F YL
Sbjct: 219 FIFAFFYL 226
>gi|329941014|ref|ZP_08290294.1| cytochrome C oxidase subunit III [Streptomyces griseoaurantiacus
M045]
gi|329300308|gb|EGG44206.1| cytochrome C oxidase subunit III [Streptomyces griseoaurantiacus
M045]
Length = 203
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G ++ A ++ +T +L+LSS
Sbjct: 22 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPDHWKEMA--SALNVPFSATNTTILVLSS 79
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W +VT G IFI +IYE+ L+ + + S + S
Sbjct: 80 LTCQLGVFA-AERGDVKKLRGWFIVTFIMGAIFIGGQIYEYTELVKKDGISLSSDPYGSV 138
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GL+ +LFVL K I +S +WHF+D++WI +F+
Sbjct: 139 FYLTTGFHGLHVTGGLLAFLFVLGRTYAAKRFTHDQATAAIVVSYYWHFVDVVWIGLFAT 198
Query: 204 VYLM 207
+YL+
Sbjct: 199 IYLI 202
>gi|28493213|ref|NP_787374.1| cytochrome c oxidase subunit III [Tropheryma whipplei str. Twist]
gi|28572673|ref|NP_789453.1| cytochrome c oxidase subunit III [Tropheryma whipplei TW08/27]
gi|28410805|emb|CAD67191.1| cytochrome c oxidase subunit III [Tropheryma whipplei TW08/27]
gi|28476254|gb|AAO44343.1| cytochrome c oxidase subunit III [Tropheryma whipplei str. Twist]
Length = 207
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 84/143 (58%), Gaps = 9/143 (6%)
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKT--------VSWLLVTAFFGMIFIIMEIYEFA 127
V+T++L+LSS++C FA+ AS + ++ + W ++AF G+IF+ ++ E+A
Sbjct: 65 VNTVILILSSVTCQFAVRASERFQPRRRSWQPRDWGAIEWFYLSAFLGLIFLAGQVNEYA 124
Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICL 186
L + + SAF S F+ G HGLHV G+ + VL+ + K + + I +
Sbjct: 125 SLYAEGITLKSSAFGSVFYLTTGFHGLHVLGGIAAMLVLIGRFYAVKRFSTHDAVAAIAV 184
Query: 187 SMFWHFLDLIWICVFSFVYLMGV 209
S +WHF+D++W+ +FS +Y++GV
Sbjct: 185 SYYWHFVDIVWVFLFSSIYILGV 207
>gi|15609330|ref|NP_216709.1| cytochrome C oxidase subunit III [Mycobacterium tuberculosis H37Rv]
gi|15841684|ref|NP_336721.1| cytochrome c oxidase, subunit III [Mycobacterium tuberculosis
CDC1551]
gi|31793372|ref|NP_855865.1| cytochrome C oxidase subunit III [Mycobacterium bovis AF2122/97]
gi|121638074|ref|YP_978298.1| putative cytochrome C oxidase (subunit III) ctaE [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662010|ref|YP_001283533.1| cytochrome c oxidase subunit III [Mycobacterium tuberculosis H37Ra]
gi|148823400|ref|YP_001288154.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
F11]
gi|215403583|ref|ZP_03415764.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
02_1987]
gi|215411918|ref|ZP_03420692.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
94_M4241A]
gi|215446422|ref|ZP_03433174.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T85]
gi|218753917|ref|ZP_03532713.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
GM 1503]
gi|219558172|ref|ZP_03537248.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T17]
gi|224990568|ref|YP_002645255.1| putative cytochrome c oxidase subunit III [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253798742|ref|YP_003031743.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
KZN 1435]
gi|254232346|ref|ZP_04925673.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
C]
gi|254364990|ref|ZP_04981036.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
str. Haarlem]
gi|260187189|ref|ZP_05764663.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
CPHL_A]
gi|260201310|ref|ZP_05768801.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T46]
gi|289443700|ref|ZP_06433444.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T46]
gi|289447821|ref|ZP_06437565.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
CPHL_A]
gi|289554020|ref|ZP_06443230.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
KZN 605]
gi|289570309|ref|ZP_06450536.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T17]
gi|289574879|ref|ZP_06455106.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
K85]
gi|289745466|ref|ZP_06504844.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
02_1987]
gi|289750787|ref|ZP_06510165.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T92]
gi|289754301|ref|ZP_06513679.1| cytochrome c oxidase subunit III [Mycobacterium tuberculosis
EAS054]
gi|289758313|ref|ZP_06517691.1| cytochrome c oxidase [Mycobacterium tuberculosis T85]
gi|289762355|ref|ZP_06521733.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
GM 1503]
gi|294993578|ref|ZP_06799269.1| cytochrome C oxidase subunit III [Mycobacterium tuberculosis 210]
gi|297634782|ref|ZP_06952562.1| cytochrome C oxidase subunit III [Mycobacterium tuberculosis KZN
4207]
gi|297731773|ref|ZP_06960891.1| cytochrome C oxidase subunit III [Mycobacterium tuberculosis KZN
R506]
gi|298525685|ref|ZP_07013094.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
94_M4241A]
gi|306776445|ref|ZP_07414782.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu001]
gi|306780222|ref|ZP_07418559.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu002]
gi|306784969|ref|ZP_07423291.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu003]
gi|306789336|ref|ZP_07427658.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu004]
gi|306793661|ref|ZP_07431963.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu005]
gi|306798052|ref|ZP_07436354.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu006]
gi|306803932|ref|ZP_07440600.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu008]
gi|306808503|ref|ZP_07445171.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu007]
gi|306968330|ref|ZP_07480991.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu009]
gi|306972557|ref|ZP_07485218.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu010]
gi|307080264|ref|ZP_07489434.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu011]
gi|307084854|ref|ZP_07493967.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu012]
gi|313659107|ref|ZP_07815987.1| cytochrome C oxidase subunit III [Mycobacterium tuberculosis KZN
V2475]
gi|54036893|sp|P63857|COX3_MYCBO RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|54040917|sp|P63856|COX3_MYCTU RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|1237046|emb|CAA94262.1| PROBABLE CYTOCHROME C OXIDASE (SUBUNIT III) CTAE [Mycobacterium
tuberculosis H37Rv]
gi|13881939|gb|AAK46535.1| cytochrome c oxidase, subunit III [Mycobacterium tuberculosis
CDC1551]
gi|31618964|emb|CAD97069.1| PROBABLE CYTOCHROME C OXIDASE (SUBUNIT III) CTAE [Mycobacterium
bovis AF2122/97]
gi|121493722|emb|CAL72197.1| Probable cytochrome C oxidase (subunit III) ctaE [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124601405|gb|EAY60415.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
C]
gi|134150504|gb|EBA42549.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
str. Haarlem]
gi|148506162|gb|ABQ73971.1| cytochrome c oxidase subunit III [Mycobacterium tuberculosis H37Ra]
gi|148721927|gb|ABR06552.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
F11]
gi|224773681|dbj|BAH26487.1| putative cytochrome c oxidase subunit III [Mycobacterium bovis BCG
str. Tokyo 172]
gi|253320245|gb|ACT24848.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
KZN 1435]
gi|289416619|gb|EFD13859.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T46]
gi|289420779|gb|EFD17980.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
CPHL_A]
gi|289438652|gb|EFD21145.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
KZN 605]
gi|289539310|gb|EFD43888.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
K85]
gi|289544063|gb|EFD47711.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T17]
gi|289685994|gb|EFD53482.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
02_1987]
gi|289691374|gb|EFD58803.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T92]
gi|289694888|gb|EFD62317.1| cytochrome c oxidase subunit III [Mycobacterium tuberculosis
EAS054]
gi|289709861|gb|EFD73877.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
GM 1503]
gi|289713877|gb|EFD77889.1| cytochrome c oxidase [Mycobacterium tuberculosis T85]
gi|298495479|gb|EFI30773.1| cytochrome C oxidase (subunit III) ctaE [Mycobacterium tuberculosis
94_M4241A]
gi|308215086|gb|EFO74485.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu001]
gi|308326839|gb|EFP15690.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu002]
gi|308330192|gb|EFP19043.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu003]
gi|308334028|gb|EFP22879.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu004]
gi|308337836|gb|EFP26687.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu005]
gi|308341596|gb|EFP30447.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu006]
gi|308345004|gb|EFP33855.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu007]
gi|308349315|gb|EFP38166.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu008]
gi|308354023|gb|EFP42874.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu009]
gi|308357965|gb|EFP46816.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu010]
gi|308361899|gb|EFP50750.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu011]
gi|308365562|gb|EFP54413.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
SUMu012]
gi|323719093|gb|EGB28238.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
CDC1551A]
gi|326903807|gb|EGE50740.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
W-148]
gi|328458505|gb|AEB03928.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
KZN 4207]
Length = 203
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+ + S + +G ++L S+ + +FA +F A G N+ P ++++
Sbjct: 12 ITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAV 71
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ T+VL+ SS +C + A A + I W ++T G+ F++ + YE+ +L+S
Sbjct: 72 PV---TLVLIASSFTCQMGVFA-AERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSH 127
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
SA+ S F+ G HGLHV GLI L+++ I +S +WHF
Sbjct: 128 GTSIPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHF 187
Query: 193 LDLIWICVFSFVYLM 207
+D++WI +F+ +Y +
Sbjct: 188 VDIVWIALFTVIYFI 202
>gi|322435774|ref|YP_004217986.1| cytochrome c oxidase subunit III [Acidobacterium sp. MP5ACTX9]
gi|321163501|gb|ADW69206.1| cytochrome c oxidase subunit III [Acidobacterium sp. MP5ACTX9]
Length = 200
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Query: 38 LMSDCLMFAVFFVTYA-VLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASA 96
++++ +F +F V Y LGK+ + GPAP +V + V+T+ LL SSL+ + A
Sbjct: 31 IVAETTIFVIFVVAYIFYLGKSLS-GPAPHEVLSLP--IVATVCLLSSSLTVHQGV-AEL 86
Query: 97 TKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-QRSAFLSSFFALVGLHGLH 155
K W+ +TA G+IF+ E+ LI + + + F ++F++LVGLH H
Sbjct: 87 RKGKSAAATFWIGITALLGLIFLGFTGAEWFDLIVHHGLTIKTNLFGTTFYSLVGLHATH 146
Query: 156 VFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208
V GLI L ++ L K L + RL LS++WHF+D +W+ VF VYL G
Sbjct: 147 VVVGLIMLLLVTFFGLNKQLEERHAERLEILSLYWHFVDAVWVIVFCVVYLFG 199
>gi|328881856|emb|CCA55095.1| Cytochrome c oxidase polypeptide III [Streptomyces venezuelae ATCC
10712]
Length = 206
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGAEFWAEKASALNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W ++T G IFI +++E+ L+ E + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRTWFIITFVMGAIFIGGQVFEYTELVKHEGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|294628921|ref|ZP_06707481.1| cytoChrome c oxidase subunit III [Streptomyces sp. e14]
gi|292832254|gb|EFF90603.1| cytoChrome c oxidase subunit III [Streptomyces sp. e14]
Length = 206
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP----IDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y L GPA D ++ +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTL--RSVTGPAHWKEMADHLNVPFSSANTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W +VT G IFI +IYE+ L+ + + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRGWFIVTFIMGAIFIGGQIYEYTSLVKEDGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL + I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+YL+
Sbjct: 202 IYLI 205
>gi|297199129|ref|ZP_06916526.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sviceus
ATCC 29083]
gi|197715151|gb|EDY59185.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sviceus
ATCC 29083]
Length = 206
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G ++ A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPDHWKEMASSLNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W ++T G IFI +IYE+ L+ + + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRGWFIITFIMGAIFIGGQIYEYTELVKKDGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HG+HV GLI +LFVL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGMHVTGGLIAFLFVLGRTYAAKRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|240168252|ref|ZP_04746911.1| cytochrome C oxidase (subunit III) CtaE [Mycobacterium kansasii
ATCC 12478]
Length = 203
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G + P ++++ + T+VL+ SS +C + A A + +
Sbjct: 43 LFAMYFTARAQSGGKWPPPPTELNLYQAVPV---TLVLIASSFTCQMGVFA-AERGDVFG 98
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++T G+ FI+ + YE+ HL + SA+ S F+ G HGLHV GLI
Sbjct: 99 LRRWYVITFLMGLFFILGQAYEYYHLATHGTTIPGSAYGSVFYLATGFHGLHVTGGLIAF 158
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+I+ I +S +WHF+D++WI +F+ +Y +
Sbjct: 159 IFLLIRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI 202
>gi|159896639|ref|YP_001542886.1| cytochrome c oxidase subunit III [Herpetosiphon aurantiacus ATCC
23779]
gi|159889678|gb|ABX02758.1| cytochrome c oxidase subunit III [Herpetosiphon aurantiacus ATCC
23779]
Length = 208
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA--AGPAPIDVFDISGIFV 76
DK + D LG W +L S+ F VT+ + A + A DV + +F
Sbjct: 10 DKNDPGRGLDLRKLGMWTFLGSEVFFFGALVVTHLSMRGVVAPSSSKANYDVAAVRNLFG 69
Query: 77 STI-------VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129
+ +LL SSL+ A+ T + WL T G++F+ ++YEF H+
Sbjct: 70 DNVLTSILAFILLTSSLTMVLALDGVKTNNQ-KRFRFWLGATIACGLVFLGGQVYEFYHI 128
Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK--KGLISGNQRRLICLS 187
+ + F S+FF + G HG HV G++WL L++ ++ + +GN +
Sbjct: 129 VHEGVTIKNMMFGSTFFFVTGFHGTHVAVGVVWLTSLLVSAIRHPERYNAGNYMAVELGG 188
Query: 188 MFWHFLDLIWICVFSFVYLM 207
++WHF+DL+W+ +F+ +YL+
Sbjct: 189 LYWHFVDLVWVLIFTVIYLI 208
>gi|301165572|emb|CBW25143.1| putative transmembrane cytochrome oxidase subunit [Bacteriovorax
marinus SJ]
Length = 211
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 15/186 (8%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS---TIVLLLSSLSC 88
+G W++L +D + F+ + YAVL + P P++ + G+ +S T +L+ SS+S
Sbjct: 31 IGMWLFLGTDGMSFSGLLIAYAVL-RWTRHWPHPVEA--LGGVALSGFMTFILICSSVS- 86
Query: 89 SFAMLASATKRLIHKTV-SWLLVTAFFGMIFIIMEIYEFAHLISMEAVP------QRSAF 141
+ A K+ K + +WL +T G+IF+ ++ YE+ HL + + F
Sbjct: 87 -MVLCIDACKQRDRKGILNWLALTILGGVIFLGIQAYEYIHLSQDLGMTFSTYAHGNNLF 145
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
S+FFA+ G HGLHV G+ +L + G+ L +FWHF+DL+WI VF
Sbjct: 146 ASTFFAVTGFHGLHVLTGVCYLCYMWKLAYDGRFDKGDYTLLELAGLFWHFVDLVWILVF 205
Query: 202 SFVYLM 207
+F+YL+
Sbjct: 206 TFIYLL 211
>gi|167969414|ref|ZP_02551691.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
H37Ra]
gi|215427568|ref|ZP_03425487.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
T92]
gi|215431127|ref|ZP_03429046.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
EAS054]
gi|254551233|ref|ZP_05141680.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260205489|ref|ZP_05772980.1| cytochrome C oxidase subunit III ctaE [Mycobacterium tuberculosis
K85]
Length = 180
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA +F A G N+ P ++++ + T+VL+ SS +C + A A + I
Sbjct: 20 LFAFYFSARAQAGGNWPPPPTELNLYQAVPV---TLVLIASSFTCQMGVFA-AERGDIFG 75
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++T G+ F++ + YE+ +L+S SA+ S F+ G HGLHV GLI
Sbjct: 76 LRRWYVITFLMGLFFVLGQAYEYRNLMSHGTSIPSSAYGSVFYLATGFHGLHVTGGLIAF 135
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+++ I +S +WHF+D++WI +F+ +Y +
Sbjct: 136 IFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI 179
>gi|298294191|ref|YP_003696130.1| cytochrome C oxidase subunit III [Starkeya novella DSM 506]
gi|296930702|gb|ADH91511.1| cytochrome c oxidase subunit III [Starkeya novella DSM 506]
Length = 240
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISG-----IFVSTIVLLLSSL 86
WI+L+SD +F+ F ++Y + P P +VF +I G + ++ + +L S
Sbjct: 44 WIFLLSDTFVFSCFLISYMTARMSTTVPWPNPSEVFALEIGGTSFPLLLIAIMTFVLISS 103
Query: 87 SCSFAMLASATKRLIHKTVSWL-LVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + R T + L L TA G F+ M+ +E+ LI P +
Sbjct: 104 SGTMAMAVNYGYRRDRVTTAMLMLATAVLGAAFVGMQAFEWTKLIHEGVRPWENPWGAAQ 163
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ----------RRLICLSMFW 190
F SSFF + G HG HV FG+I+L + ++L+ +G + + + ++W
Sbjct: 164 FGSSFFMITGFHGTHVTFGVIFLIAIARKVLRGDFDTGRRGFFTSRKGSYESVEIMGLYW 223
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 224 HFVDLVWVFIFAFFYL 239
>gi|118618835|ref|YP_907167.1| cytochrome C oxidase (subunit III) CtaE [Mycobacterium ulcerans
Agy99]
gi|183983228|ref|YP_001851519.1| cytochrome C oxidase (subunit III) CtaE [Mycobacterium marinum M]
gi|118570945|gb|ABL05696.1| cytochrome C oxidase (subunit III) CtaE [Mycobacterium ulcerans
Agy99]
gi|183176554|gb|ACC41664.1| cytochrome C oxidase (subunit III) CtaE [Mycobacterium marinum M]
Length = 203
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG--PAPIDVFDISGI 74
+ + S + +G ++L S+ + FA F Y ++ A G P P ++
Sbjct: 12 ITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMY-FTARSQAGGKWPPPPTELNLYQA 70
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
T+VL+ SS +C + A A + + W ++T G+ F++ + YE+ HL++
Sbjct: 71 VPVTLVLIASSFTCQMGVFA-AERGDVFGLRRWYVITFLMGLFFVLGQGYEYYHLVTHGT 129
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
SA+ S F+ G HGLHV GLI L+++ I +S +WHF+D
Sbjct: 130 TIPGSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVD 189
Query: 195 LIWICVFSFVYLM 207
++WI +F+ +Y +
Sbjct: 190 IVWIALFTVIYFI 202
>gi|123965741|ref|YP_001010822.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9515]
gi|123200107|gb|ABM71715.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9515]
Length = 200
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 17 VKDKKESCVDH--DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDI 71
+K + +H D G +L++D + FA FF Y A P P I ++
Sbjct: 10 IKKNESELREHHEDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELEL 66
Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHK----TVSWLLVTAFFGMIFIIMEIYEFA 127
++TI+LL+SS A A K L+ T WLLVTA G++F+I +++E+
Sbjct: 67 PIPTLNTILLLVSS-----ATFHKAGKALLKNKNSDTQKWLLVTALLGIVFLICQLFEYF 121
Query: 128 HLISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR--R 182
+L P + F S+F+AL G HGLHV G + + ++ Q KG NQ
Sbjct: 122 NL------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIISWQARSKGGRITNQNMFP 175
Query: 183 LICLSMFWHFLDLIWICVFSFVYLM 207
L + ++WHF+D IW+ +F +YL+
Sbjct: 176 LEAVELYWHFVDGIWVVLFIILYLL 200
>gi|256788231|ref|ZP_05526662.1| cytochrome c oxidase subunit III [Streptomyces lividans TK24]
Length = 169
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F +V G ++ + A D +I +T +L+LSSL+C + A A + + K
Sbjct: 6 LFAMYFTLRSVTGPDFWSEKA--DALNIPFSATNTTILVLSSLTCQLGVFA-AERGDVKK 62
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSSFFALVGLHGLHVFFGLI- 161
W +VT G IFI +++E+ L+ E + S + S+F+ G HGLHV GLI
Sbjct: 63 LRMWFIVTFVMGAIFIGGQVFEYTELVKHEGISLSSDPYGSAFYLTTGFHGLHVTGGLIA 122
Query: 162 WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
+L VL + I +S +WHF+D++WI +F+ +YL+
Sbjct: 123 FLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFATIYLI 168
>gi|296269276|ref|YP_003651908.1| cytochrome-c oxidase [Thermobispora bispora DSM 43833]
gi|296092063|gb|ADG88015.1| Cytochrome-c oxidase [Thermobispora bispora DSM 43833]
Length = 205
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAG---PAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
++L S+ + FA F Y + + +A G P P DI +T +L+LSS++C +
Sbjct: 31 VWLSSELMFFAALFAMYFTI-RAFALGQGQPWPEAHLDIPFATANTTILVLSSVTCQLGV 89
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A + + K W V+ G IF+ +++E+ +L+ S + S F+ G H
Sbjct: 90 WA-VERGQVGKLQFWYWVSFLLGAIFVAGQLWEYGNLVHEGHTLSHSPYDSIFYLATGFH 148
Query: 153 GLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
GLHV GL+ +LF+L + K L Q I +S +WHF+D++WI +F+ +Y++
Sbjct: 149 GLHVTGGLVAFLFLLGRTYVAKRLTHEQQTSAIVVSYYWHFVDVVWIGLFATIYII 204
>gi|172040916|ref|YP_001800630.1| cytochrome c oxidase subunit III [Corynebacterium urealyticum DSM
7109]
gi|171852220|emb|CAQ05196.1| cytochrome c oxidase subunit III [Corynebacterium urealyticum DSM
7109]
Length = 194
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV+ A G N+ + P ++V + I TI+L+ SS++ F + A A + +
Sbjct: 34 LFAMYFVSKANSGGNWPSEPTELNVPFAATI---TIILISSSVTAQFGVFA-AERGDVFA 89
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++A G +F+I + YE+ HL+ S + S FF G HG HV G+I
Sbjct: 90 LRRWYALSALLGTVFLIGQGYEYFHLVQTGTTIPGSVYGSVFFITTGFHGAHVLAGVIAF 149
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
V++++ K + +S +WHF+D++WI ++ +Y +
Sbjct: 150 LVVLLRTFKSKFTPAQATAAVVVSYYWHFVDVVWIGLWITIYFV 193
>gi|315290023|ref|ZP_07872198.1| quinol oxidase, subunit 3 [Listeria ivanovii FSL F6-596]
gi|313630855|gb|EFR98564.1| quinol oxidase, subunit 3 [Listeria ivanovii FSL F6-596]
Length = 96
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 118 FIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLIS 177
F+ E+YEFAH ++ Q ++ S+FF L+G HGLHV G+ W+ ++IQI GL
Sbjct: 3 FVGFELYEFAHYVTEGVTMQVGSYWSAFFVLLGTHGLHVTVGIFWISFILIQIKMHGLTP 62
Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210
++ S++WHFLD++WI +F+ VYL+G+V
Sbjct: 63 KTASKVFISSLYWHFLDVVWIFIFTGVYLLGMV 95
>gi|13471153|ref|NP_102722.1| cytochrome c oxidase subunit III [Mesorhizobium loti MAFF303099]
gi|14021897|dbj|BAB48508.1| cytochrome c oxidase subunit III [Mesorhizobium loti MAFF303099]
Length = 239
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLG-KNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y P P +VF +I I ++ + +L S
Sbjct: 43 WIFLLSDTFIFGCFLLAYMTARISTREPWPNPSEVFALRIGGSEIPLILIAIMTFVLISS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-----QRSA 140
S + AM + +R KT +L+TA G F+ M+ +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRDRRKTAILMLLTAALGATFVGMQAFEWTKLITEGVRPWGNPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ----------RRLICLSMFW 190
F SSFF + G HG HV G+I+L ++ ++ + +G + + + ++W
Sbjct: 163 FGSSFFMITGFHGTHVTIGVIFLIIVARKVWRGDFDTGRRGFFTSRKGRYENVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|294011124|ref|YP_003544584.1| cytochrome c oxidase subunit III [Sphingobium japonicum UT26S]
gi|292674454|dbj|BAI95972.1| cytochrome c oxidase subunit III [Sphingobium japonicum UT26S]
Length = 227
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F+ F Y V P +VF I I ++ + +L S
Sbjct: 40 WIFLLSDTFIFSCFLTGYMTVRASAVLPWPNTAEVFALTIGGQSIPLILIAIMTFVLISS 99
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R KT + +L+TA FG F+ M+ +E+ LI P +
Sbjct: 100 SGTMAMAVNFGYRRDRRKTAALMLLTALFGTTFVSMQAFEWTKLIEEGVRPWSNPMGAPQ 159
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGL-ISGNQRRLICLSMFWHFLDLIWIC 199
F +SFF + G HGLHV G+I L ++ ++ + +G+ + ++WHF+DL+W+
Sbjct: 160 FGASFFMITGFHGLHVTCGVILLLIIAYKVARGHYDRTGDYSAVEIAGLYWHFVDLVWVF 219
Query: 200 VFSFVYL 206
+F+F YL
Sbjct: 220 IFAFFYL 226
>gi|255023634|ref|ZP_05295620.1| AA3-600 quinol oxidase subunit III [Listeria monocytogenes FSL
J1-208]
Length = 161
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK-NYAAG 62
+ + + N + Y ++ + LGFWI+L ++ +FA F TY V+ K AG
Sbjct: 2 ESVETNKNLPIEYRSEQGRLNI------LGFWIFLGAEIALFATLFATYFVMRKAGSNAG 55
Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122
P ++F++ + + T +LL SS +C A + K + + ++T G F+ E
Sbjct: 56 HPPAEMFELWLVLIMTFLLLTSSFTCGLA-IGEMRKGNVKMLTIYSIITLILGAGFVGFE 114
Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
+YEFAH ++ Q ++ S+FF L+G HGLHV G+ W+
Sbjct: 115 LYEFAHYVTEGVTMQIGSYWSAFFVLLGTHGLHVTVGIFWI 155
>gi|145223396|ref|YP_001134074.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
gi|145215882|gb|ABP45286.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
Length = 197
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
+G ++L S+ + FA F Y P P +++ T++L+ SS +C
Sbjct: 22 VGTIVWLSSELMFFAGLFAMYFTARAQADEWPPPPTELNLALAVPVTLILIASSFTCQMG 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A A + + W +VT G+IF++ + YE+ L+ SA+ S F+ G
Sbjct: 82 VFA-AERGDVFGLRRWYVVTLLMGLIFVLGQGYEYISLVREGTTIAGSAYGSVFYLTTGF 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
HGLHV GL+ +L+I+ I +S +WHF+D++WI +F+ +Y
Sbjct: 141 HGLHVIGGLVAFILLLIRTRMSKFTPAQATAAIVVSYYWHFVDIVWIALFATIY 194
>gi|297194819|ref|ZP_06912217.1| cytochrome c oxidase subunit III [Streptomyces pristinaespiralis
ATCC 25486]
gi|197720720|gb|EDY64628.1| cytochrome c oxidase subunit III [Streptomyces pristinaespiralis
ATCC 25486]
Length = 206
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGAEFWAEKADALNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W ++T G IFI +++E+ L+ E + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRTWFVITFVMGAIFIGGQVFEYTELVKHEGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL + I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|218659781|ref|ZP_03515711.1| putative transmembrane cytochrome oxidase subunit [Rhizobium etli
IE4771]
Length = 239
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYA-AGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y + A P P +VF D+ I ++ + +L S
Sbjct: 43 WIFLLSDTFVFGCFLLAYMTARMSTPVAWPNPSEVFALHIGGQDVPLILIAIMTFVLISS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R +T +L+TA G F+ M +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRDRGRTAVLMLLTALLGACFVGMHAFEWTKLITERVRPWENPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLIS---GNQRRLICLSMFW 190
F S+FF + G HG HV G+I+L ++ ++ + +G + G+ + + ++W
Sbjct: 163 FGSTFFMITGFHGTHVTIGVIFLLIVARKVWRGDFDVERRGFFTSRRGHYEAVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|23308908|ref|NP_601396.2| cytochrome C oxidase subunit III [Corynebacterium glutamicum ATCC
13032]
gi|62391032|ref|YP_226434.1| cytochrome c oxidase subunit 3 [Corynebacterium glutamicum ATCC
13032]
gi|62900043|sp|Q9AEL8|COX3_CORGL RecName: Full=Cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|13274108|emb|CAC33825.1| cytochrome aa3 oxidase subunit III [Corynebacterium glutamicum]
gi|15430576|dbj|BAB64408.1| cytochrome c oxidase subunit III [Corynebacterium glutamicum]
gi|21324962|dbj|BAB99585.1| Heme/copper-type cytochrome/quinol oxidase, subunit 3
[Corynebacterium glutamicum ATCC 13032]
gi|41326371|emb|CAF20533.1| CYTOCHROME C OXIDASE SUBUNIT 3 [Corynebacterium glutamicum ATCC
13032]
Length = 205
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L + + FA F Y V N A + D ++ + T++L+ SS++C
Sbjct: 27 VGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWGEQTDHLNVPYALLITVILVSSSVTC 86
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
F + A A + ++ W LVT G IF+I + YE+ L+ Q S + S+FF
Sbjct: 87 QFGVFA-AERGDVYGLRKWFLVTIILGSIFVIGQGYEYITLVGHGLTIQSSVYGSAFFIT 145
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G H LHV G++ V++++I K + +S +WHF+D++WI +F +Y +
Sbjct: 146 TGFHALHVIAGVMAFVVVLMRIHKSKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFI 204
>gi|241205302|ref|YP_002976398.1| cytochrome C oxidase subunit III [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859192|gb|ACS56859.1| cytochrome c oxidase subunit III [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 239
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y + P P +VF D+ I ++ + +L S
Sbjct: 43 WIFLLSDTFVFGCFLIAYMTARMSTPVPWPNPSEVFALHIGGQDVPLILIAIMTFVLISS 102
Query: 87 SCSFAMLASATKRLIHKTVSWL-LVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + R +T + L L+TA G F+ M+ +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRDRRTTAILMLLTAVLGACFVGMQAFEWTKLITEGVRPWENPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F S+FF + G HG HV G+I+L ++ ++ + +G + + R + + ++W
Sbjct: 163 FGSTFFMITGFHGTHVTIGVIFLLIVARKVWRGDFDEERRGFFTSRKGRYEAVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|72161426|ref|YP_289083.1| cytochrome c oxidase subunit III [Thermobifida fusca YX]
gi|71915158|gb|AAZ55060.1| cytochrome c oxidase subunit III [Thermobifida fusca YX]
Length = 194
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F +V N GP P +I T +L+ SS + F + A A + + K
Sbjct: 29 LFAMYFTIRSVTKGNPDLGPWPDAHLNIVLSTTITTILVASSFTAQFGVWA-AERGDVKK 87
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSSFFALVGLHGLHVFFGLI- 161
W ++ G IFII + YE+ LI E + RS A+ S FF G HGLHV GL
Sbjct: 88 LRKWFFISFLLGAIFIIGQGYEYYELIVHEGLTMRSSAYGSMFFLTTGFHGLHVLGGLFA 147
Query: 162 WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
+L VL K I +S +WHF+D++W+ +F+ +YL+
Sbjct: 148 FLLVLGRTYAAKRFTHQQATSAIVVSYYWHFVDVVWVGLFASIYLL 193
>gi|302561060|ref|ZP_07313402.1| cytoChrome c oxidase subunit III [Streptomyces griseoflavus Tu4000]
gi|302478678|gb|EFL41771.1| cytoChrome c oxidase subunit III [Streptomyces griseoflavus Tu4000]
Length = 203
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G ++ + A + F S +T +L+LSS
Sbjct: 22 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPDFWSEKADLLNFPFSA--TNTTILVLSS 79
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W +VT G +FI +++E+ L+ E + S + S
Sbjct: 80 LTCQLGVFA-AERGDVKKLRMWFIVTFIMGAVFIGGQVFEYTELVKHEGLSLSSDPYGSV 138
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL + I +S +WHF+D++WI +F+
Sbjct: 139 FYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 198
Query: 204 VYLM 207
+Y++
Sbjct: 199 IYMI 202
>gi|254382659|ref|ZP_04998017.1| cytochrome c oxidase subunit III [Streptomyces sp. Mg1]
gi|194341562|gb|EDX22528.1| cytochrome c oxidase subunit III [Streptomyces sp. Mg1]
Length = 206
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 32 LGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G I+L S+ + FA F Y +V G Y A S +T +L+LSSL+
Sbjct: 27 VGTIIWLSSELMFFAALFAMYFTLRSVTGAEYWTEQASALNLPFSA--TNTTILVLSSLT 84
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA-FLSSFF 146
C + A A + + K +W ++T G IFI +++E+ L+ E + S + S F+
Sbjct: 85 CQLGVFA-AERGDVKKLRTWFIITFVMGAIFIGGQVFEYTELVKHEGMSLSSGPYGSVFY 143
Query: 147 ALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GLI +L VL K I +S +WHF+D++WI +F+ +Y
Sbjct: 144 LTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHEQATSAIVVSYYWHFVDVVWIGLFATIY 203
Query: 206 LM 207
L+
Sbjct: 204 LI 205
>gi|126695806|ref|YP_001090692.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9301]
gi|126542849|gb|ABO17091.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9301]
Length = 200
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E H D G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNNSEVNETHEDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS----WLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ S WL TAF G+IF+I +++E+ HL
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKALLKDKNSESQKWLFFTAFLGIIFLICQLFEYFHL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQI-LKKG-LISGNQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q +K G L S N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIIAWQSRIKSGRLTSQNMFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|302534026|ref|ZP_07286368.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sp. C]
gi|302442921|gb|EFL14737.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sp. C]
Length = 206
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Query: 32 LGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G I+L S+ + FA F Y +V G Y A + ++ +T +L+LSSL+
Sbjct: 27 VGTIIWLSSELMFFAALFAMYFTLRSVTGAEYWTEQA--EALNLPFSATNTTILVLSSLT 84
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA-FLSSFF 146
C + A A + + K +W ++T G IFI +++E+ L+ E + S + + F+
Sbjct: 85 CQLGVFA-AERGDVKKLRTWFIITFVMGAIFIGGQVFEYTELVKHEGMSLSSGPYGTVFY 143
Query: 147 ALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GLI +L VL K I +S +WHF+D++WI +F+ +Y
Sbjct: 144 LTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHEQATSAIVVSYYWHFVDVVWIGLFATIY 203
Query: 206 LM 207
L+
Sbjct: 204 LI 205
>gi|116252786|ref|YP_768624.1| transmembrane cytochrome oxidase subunit [Rhizobium leguminosarum
bv. viciae 3841]
gi|115257434|emb|CAK08530.1| putative transmembrane cytochrome oxidase subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 239
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYA-AGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y + A P P +VF D+ I ++ + +L S
Sbjct: 43 WIFLLSDTFVFGCFLIAYMTARMSTPVAWPNPSEVFALHIGGQDVPLILIAIMTFVLISS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R T +L+TA G F+ M+ +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRDRRMTAMLMLLTAVLGAGFVGMQAFEWTKLITEGVRPWENPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F S+FF + G HG HV G+I+L ++ ++ + +G + + R + + ++W
Sbjct: 163 FGSTFFMITGFHGTHVTIGVIFLLIVARKVWRGDFDVERRGFFTSRKGRYEAVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|190892331|ref|YP_001978873.1| cytochrome c oxidase, subunit III [Rhizobium etli CIAT 652]
gi|190697610|gb|ACE91695.1| cytochrome c oxidase protein, subunit III [Rhizobium etli CIAT 652]
Length = 239
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y + P P +VF D+ I ++ + +L S
Sbjct: 43 WIFLLSDTFVFGCFLIAYMTARMSTPVPWPNPSEVFALHIGGADVPLILIAIMTFVLISS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R T +L+TA G F+ M+ +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRDRRVTAILMLLTALLGATFVSMQAFEWTKLITEGVRPWENPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F S+FF + G HG HV G+I+L ++ ++ + +G + + R + + ++W
Sbjct: 163 FGSTFFMITGFHGTHVTIGVIFLLIIARKVWRGDFDVERRGFFTSRKGRYEAVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|119869385|ref|YP_939337.1| cytochrome c oxidase, subunit III [Mycobacterium sp. KMS]
gi|126435880|ref|YP_001071571.1| cytochrome c oxidase, subunit III [Mycobacterium sp. JLS]
gi|119695474|gb|ABL92547.1| cytochrome c oxidase, subunit III [Mycobacterium sp. KMS]
gi|126235680|gb|ABN99080.1| cytochrome c oxidase, subunit III [Mycobacterium sp. JLS]
Length = 203
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG--PAPIDVFDISGI 74
+ + S + +G ++L S+ + FA F Y + A G P P +++
Sbjct: 12 ITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMY-FTARAQAGGEWPPPPTELNLALA 70
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134
T+VL+ SS +C + A A + + W ++T G+ F++ ++YE+ HL+
Sbjct: 71 VPVTLVLIASSFTCQMGVFA-AERGDVFGLRRWYVLTFLMGLFFVLGQLYEYYHLVHEGT 129
Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
SA+ S F+ G HGLHV GL+ L+ + I +S +WHF+D
Sbjct: 130 TIPGSAYGSVFYLATGFHGLHVIGGLVAFLFLLARTKMSKFTPAQATAAIVVSYYWHFVD 189
Query: 195 LIWICVFSFVY 205
++WI +F+ +Y
Sbjct: 190 IVWIALFAVIY 200
>gi|91070413|gb|ABE11325.1| cytochrome c oxidase, subunit III [uncultured Prochlorococcus
marinus clone HOT0M-10D2]
Length = 200
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E H D G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNNSEVNETHEDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIH----KTVSWLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ + WL +TA G+IF+I +++E+ HL
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKALLKDKNFNSQKWLFITASLGIIFLICQLFEYFHL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q G L S N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIIAWQSRSNGGRLTSQNMFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|68535794|ref|YP_250499.1| cytochrome c oxidase subunit III [Corynebacterium jeikeium K411]
gi|68263393|emb|CAI36881.1| cytochrome c oxidase subunit III [Corynebacterium jeikeium K411]
Length = 194
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV+ A G N+ + P ++V + I T++L+ SS + + + A A + +
Sbjct: 34 LFAMYFVSKANSGGNWPSEPTELNVPFAATI---TVILISSSFTAQWGVFA-AERGDVFA 89
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++A G IF+I + YE+ HL+ S + S FF G HG HV G+I
Sbjct: 90 LRKWYALSALLGTIFLIGQGYEYVHLVQHGTTIPGSVYGSVFFITTGFHGAHVLAGVIAF 149
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
V++++ K + +S +WHF+D++WI ++ +Y +
Sbjct: 150 LVVLLRTAKSKFTPAQATAAVVVSYYWHFVDVVWIGLWITIYFI 193
>gi|312140186|ref|YP_004007522.1| cytochrome c oxidase subunit iii [Rhodococcus equi 103S]
gi|311889525|emb|CBH48842.1| cytochrome c oxidase subunit III [Rhodococcus equi 103S]
Length = 188
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV A N+ P P ++ +++ T+VL+ SS +C + A A K +
Sbjct: 28 LFAMYFVARAQANGNWP--PEPTEL-NLTLAVPVTLVLIASSFTCQMGVFA-AEKGDVFG 83
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W LVT G F++ + YE+ HL+ S + S F+ G HGLHV GLI
Sbjct: 84 LRRWYLVTLAMGTFFVLGQGYEYYHLVHEGTTISSSVYGSVFYMTTGFHGLHVIGGLIAF 143
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+++ I +S +WHF+D++WI +F+ +Y +
Sbjct: 144 VFLIVRTKVSKFTPAQATAAIVVSYYWHFVDIVWIGLFATIYFI 187
>gi|78778828|ref|YP_396940.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9312]
gi|78712327|gb|ABB49504.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9312]
Length = 200
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDHDG-TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E HD G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNNSEVNEKHDDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHK----TVSWLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ WL TAF G+IF+I +++E+ HL
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKALLKDKNPDAQKWLFCTAFLGIIFLICQLFEYFHL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q G + S N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIIAWQSRINGGRVTSQNMFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|325676932|ref|ZP_08156604.1| cytochrome c oxidase, subunit III [Rhodococcus equi ATCC 33707]
gi|325552232|gb|EGD21922.1| cytochrome c oxidase, subunit III [Rhodococcus equi ATCC 33707]
Length = 180
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV A N+ P P ++ +++ T+VL+ SS +C + A A K +
Sbjct: 20 LFAMYFVARAQANGNWP--PEPTEL-NLTLAVPVTLVLIASSFTCQMGVFA-AEKGDVFG 75
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W LVT G F++ + YE+ HL+ S + S F+ G HGLHV GLI
Sbjct: 76 LRRWYLVTLAMGTFFVLGQGYEYYHLVHEGTTISSSVYGSVFYMTTGFHGLHVIGGLIAF 135
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+++ I +S +WHF+D++WI +F+ +Y +
Sbjct: 136 VFLIVRTKVSKFTPAQATAAIVVSYYWHFVDIVWIGLFATIYFI 179
>gi|260578118|ref|ZP_05846039.1| cytochrome c oxidase, subunit III [Corynebacterium jeikeium ATCC
43734]
gi|258603757|gb|EEW17013.1| cytochrome c oxidase, subunit III [Corynebacterium jeikeium ATCC
43734]
Length = 180
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV+ A G N+ + P ++V + I T++L+ SS + + + A A + +
Sbjct: 20 LFAMYFVSKANSGGNWPSEPTELNVPFAATI---TVILISSSFTAQWGVFA-AERGDVFA 75
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++A G IF+I + YE+ HL+ S + S FF G HG HV G+I
Sbjct: 76 LRKWYALSALLGTIFLIGQGYEYVHLVQHGTTIPGSVYGSVFFITTGFHGAHVLAGVIAF 135
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
V++++ K + +S +WHF+D++WI ++ +Y +
Sbjct: 136 LVVLLRTAKSKFTPAQATAAVVVSYYWHFVDVVWIGLWITIYFI 179
>gi|196233769|ref|ZP_03132608.1| cytochrome c oxidase subunit III [Chthoniobacter flavus Ellin428]
gi|196222131|gb|EDY16662.1| cytochrome c oxidase subunit III [Chthoniobacter flavus Ellin428]
Length = 214
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 26/206 (12%)
Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG----IFV 76
+++ + LG W++L ++ L F F+ Y V Y +VF ++ I +
Sbjct: 12 EDAAQQREAATLGMWVFLATEVLFFGAMFLGYTVYRLKYP------EVFRMASEHTIIVI 65
Query: 77 STI---VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS-- 131
TI +LLLSS + A+ A+ KR + +++L VTA FG+ F++++ +E+AH I+
Sbjct: 66 GTINTGILLLSSFTMVLAVRAAEFKRRM-ALIAFLSVTALFGIAFLVLKGFEYAHEINEG 124
Query: 132 ---------MEAVPQRSA-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181
EA P + F +F + G+H LHV G+I L + ++ + +
Sbjct: 125 LFPGSHFQFTEADPYTARMFFYLYFLMTGVHALHVTIGVIMLVIFALRAMLTLKLERLST 184
Query: 182 RLICLSMFWHFLDLIWICVFSFVYLM 207
+ L ++WHF+D++W+ +F +YL+
Sbjct: 185 AVDLLGLYWHFVDIVWVFLFPLIYLV 210
>gi|184200926|ref|YP_001855133.1| cytochrome c oxidase subunit III [Kocuria rhizophila DC2201]
gi|183581156|dbj|BAG29627.1| cytochrome c oxidase subunit III [Kocuria rhizophila DC2201]
Length = 212
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA----PIDVFDISG 73
K S + T +G ++L S+ + FA F Y L A P ++ ++
Sbjct: 10 KPVGASITRPNLTSVGTIVWLSSEVMFFAGLFAMYFTL---RATSPEVWAENTEILNVPM 66
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTV------------SWLLVTAFFGMIFIIM 121
V+T++L+LSS++C F + A+ +RL + W +T G +F+ +
Sbjct: 67 ASVNTLILVLSSVTCQFGVFAA--ERLQPRRTGGLFQVSKWGLTEWFALTFLMGAVFVSV 124
Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQ 180
++YE+A L+S SA+ S+F+ G H LHV GLI +LF++ + K
Sbjct: 125 QVYEYASLVSEGVTIAASAYGSAFYITTGFHALHVTGGLIAFLFIMGRAFVAKRFGHYEA 184
Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLM 207
I +S +WHF+D++WI +F VY +
Sbjct: 185 TSAIVVSYYWHFVDVVWIVLFFLVYFI 211
>gi|302546079|ref|ZP_07298421.1| cytoChrome c oxidase subunit III [Streptomyces hygroscopicus ATCC
53653]
gi|302463697|gb|EFL26790.1| cytoChrome c oxidase subunit III [Streptomyces himastatinicus ATCC
53653]
Length = 206
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGAEHWKEMASSLNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K SW ++T G IFI +I+E+ L+ + + S + S
Sbjct: 83 LTCQLGVFA-AERGDVRKLRSWFVITFIMGAIFIGGQIFEYTELVKKDGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHQQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|290961091|ref|YP_003492273.1| cytochrome C oxidase subunit III [Streptomyces scabiei 87.22]
gi|260650617|emb|CBG73733.1| cytochrome c oxidase subunit III [Streptomyces scabiei 87.22]
Length = 203
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A F S +T +L+LSS
Sbjct: 22 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPEFWHEKASTLNFPFSA--TNTTILVLSS 79
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W +VT G IFI +++E+ L+ E + S + S
Sbjct: 80 LTCQLGVFA-AERGDVKKLRMWFIVTFVMGAIFIGGQVFEYTELVKHEGLSLSSDPYGSV 138
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 139 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 198
Query: 204 VYLM 207
+Y++
Sbjct: 199 IYMI 202
>gi|108800257|ref|YP_640454.1| cytochrome c oxidase, subunit III [Mycobacterium sp. MCS]
gi|108770676|gb|ABG09398.1| cytochrome c oxidase, subunit III [Mycobacterium sp. MCS]
Length = 180
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAG--PAPIDVFDISGIFVSTIVLLLSSLSCSFAML 93
++L S+ + FA F Y + A G P P +++ T+VL+ SS +C +
Sbjct: 8 VWLSSELMFFAGLFAMY-FTARAQAGGEWPPPPTELNLALAVPVTLVLIASSFTCQMGVF 66
Query: 94 ASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHG 153
A A + + W ++T G+ F++ ++YE+ HL+ SA+ S F+ G HG
Sbjct: 67 A-AERGDVFGLRRWYVLTFLMGLFFVLGQLYEYYHLVHEGTTIPGSAYGSVFYLATGFHG 125
Query: 154 LHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
LHV GL+ L+ + I +S +WHF+D++WI +F+ +Y
Sbjct: 126 LHVIGGLVAFLFLLARTKMSKFTPAQATAAIVVSYYWHFVDIVWIALFAVIY 177
>gi|302869017|ref|YP_003837654.1| cytochrome-c oxidase [Micromonospora aurantiaca ATCC 27029]
gi|315504512|ref|YP_004083399.1| cytochrome-c oxidase [Micromonospora sp. L5]
gi|302571876|gb|ADL48078.1| Cytochrome-c oxidase [Micromonospora aurantiaca ATCC 27029]
gi|315411131|gb|ADU09248.1| Cytochrome-c oxidase [Micromonospora sp. L5]
Length = 199
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP----IDVFDISG 73
K + S + +G ++L S+ + FA F Y + AA P +V +I
Sbjct: 9 KSRIHSLTRPNMVSVGTIVWLSSELMFFAALFAMYFSI---RAAAPEQWEKHTEVLNIPY 65
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
T++L+LSS++C + A A + +H W +T G+IF++ ++ E+ L+
Sbjct: 66 ATTFTVILVLSSITCQIGVFA-AERGDVHALRRWFTITFVMGLIFVLGQLNEYRTLVHEG 124
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
+ S F+ G HGLHV GLI + +I+ I +S +WHF+
Sbjct: 125 VKINEDGYGSMFYLTTGFHGLHVTGGLIAFVIFMIRTTMGRFTPAQATSAIVVSYYWHFV 184
Query: 194 DLIWICVFSFVY 205
D++WI +++ +Y
Sbjct: 185 DVVWIGLYAMIY 196
>gi|300784112|ref|YP_003764403.1| cytochrome C oxidase subunit III [Amycolatopsis mediterranei U32]
gi|299793626|gb|ADJ44001.1| cytochrome c oxidase subunit III [Amycolatopsis mediterranei U32]
Length = 185
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD------ISGIFVSTIVLLLSSLSCS 89
++L S+ + FA F + + ++G P + D ++ T++L+LSSL+C
Sbjct: 8 VWLSSELMFFAGLFAMFFTVKAQNSSGQWPPPLHDEPFHLNVAYAIPFTVILVLSSLTCQ 67
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149
F + A A + ++ W +VT G IF+ + E+ +L+ F + FF
Sbjct: 68 FGVFA-AERGDVYGLRRWYIVTLIMGAIFVAGQANEYHNLVEEGMTIPSGPFGTVFFLAT 126
Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G HGLHV GLI L+I+ I +S +WHF+D++W+ +F +YL+
Sbjct: 127 GFHGLHVIGGLIAFVYLLIRTKLSKFTPAQATSAIVVSYYWHFVDIVWVGLFGVIYLL 184
>gi|119717358|ref|YP_924323.1| cytochrome c oxidase, subunit III [Nocardioides sp. JS614]
gi|119538019|gb|ABL82636.1| cytochrome c oxidase, subunit III [Nocardioides sp. JS614]
Length = 215
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 20/192 (10%)
Query: 32 LGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G I+L S+ + FA F +Y AV +A ++V S V+T +L+LSSL+
Sbjct: 27 VGTIIWLSSELMFFAALFASYFTIRAVSPDLWAENTQHLNVPFAS---VNTTILVLSSLT 83
Query: 88 CSFAMLASATKRLIHKTVS-----------WLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
C + A A + + +T S W ++T G IFI + E+A LI
Sbjct: 84 CQLGVFA-AERGQVGRTGSILNVPGWGLREWFVLTYIMGAIFIGGQATEYAELIRENITI 142
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
Q SA+ + F+ G HGLHV GLI +LFVL + + I +S +WHF+D+
Sbjct: 143 QDSAYGTMFYLTTGFHGLHVTGGLIAFLFVLGRTYVARKFTHEQAVSAIVVSYYWHFVDV 202
Query: 196 IWICVFSFVYLM 207
+WI +F+ +YL+
Sbjct: 203 VWIGLFATIYLV 214
>gi|297161223|gb|ADI10935.1| cytochrome c oxidase subunit III [Streptomyces bingchenggensis
BCW-1]
Length = 206
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGAEHWKEMASALNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W ++T G IF+ +I+E+ L+ E + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRAWFVITFIMGAIFVGGQIFEYTELVKHEGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHQQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|109900541|ref|YP_663796.1| cytochrome c oxidase, subunit III [Pseudoalteromonas atlantica T6c]
gi|109702822|gb|ABG42742.1| cytochrome c oxidase, subunit III [Pseudoalteromonas atlantica T6c]
Length = 293
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Query: 76 VSTIVLLLSSLSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SME 133
++T++LL+SS++C FA +A KR K + L +T G IF+ +++ E+ H M
Sbjct: 162 INTVILLISSVTCHFAHVALEENKRGRLKLM--LGITVLLGAIFMSLQVEEYIHAYQEMG 219
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
Q + ++FF L G HGLHV G I LF+++++I K N S +WHF+
Sbjct: 220 LTLQSGVYGNTFFLLTGFHGLHVTLGAIILFIMLLRIFKGHFTPENHFAFQAGSWYWHFV 279
Query: 194 DLIWICVFSFVYLM 207
D++W+ +F FVY++
Sbjct: 280 DVVWVMLFFFVYIL 293
>gi|271964190|ref|YP_003338386.1| cytochrome-c oxidase [Streptosporangium roseum DSM 43021]
gi|270507365|gb|ACZ85643.1| Cytochrome-c oxidase [Streptosporangium roseum DSM 43021]
Length = 205
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAG---PAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
++L S+ + FA F Y + ++ + G P P ++ +TI+L+LSS++C +
Sbjct: 31 VWLSSELMFFAALFAMYFTI-RSVSLGQGLPWPEAHLNVPFSLANTIILVLSSVTCQLGV 89
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A A K + K W +V+ G +F+ ++YE++ L+ SA+ S F+ G H
Sbjct: 90 WA-AEKGQVAKLRFWYIVSFLMGAVFVGGQLYEYSQLVHEGHTLSHSAYDSVFYLTTGFH 148
Query: 153 GLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
GLHV GLI +LF+L K I +S +WHF+D++WI +F +Y
Sbjct: 149 GLHVTGGLIAFLFMLGRTYAAKRFTREQATSAIVVSYYWHFVDVVWIGLFVTIY 202
>gi|123968036|ref|YP_001008894.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str.
AS9601]
gi|123198146|gb|ABM69787.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus str.
AS9601]
Length = 200
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E H D G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNNSEVNETHEDFRMFGLVTFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS----WLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ S WL +TA G+IF+I +++E+ HL
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKALLKDKNSDSQKWLFITASLGIIFLICQLFEYFHL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q G L S N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIIAWQSRINGGRLTSQNMFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|145225979|ref|YP_001136633.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
gi|145218442|gb|ABP47845.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
Length = 197
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
+G ++L S+ + FA F Y P P +++ T+VL+ SS +C
Sbjct: 22 VGTIVWLSSELMFFAGLFAMYFTARAQAEEWPPPPTELNLALAVPVTLVLIASSFTCQMG 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A A + + W +VT G+ F++ + YE+ L+ SA+ S F+ G
Sbjct: 82 VFA-AERGDVFGLRRWYVVTFVMGLFFVLGQGYEYLSLVREGTTIAGSAYGSVFYLTTGF 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
HGLHV GL+ +L+++ I +S +WHF+D++WI +F+ +Y
Sbjct: 141 HGLHVIGGLVAFILLLVRTRMSKFTPAQATAAIVVSYYWHFVDIVWIALFAVIY 194
>gi|62900021|sp|Q8FNQ9|COX3_COREF RecName: Full=Cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
Length = 205
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L + + FA F Y V N A + D ++ T++L+ SS++C
Sbjct: 27 VGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWAEQTDYLNVPYALAITVILVSSSVTC 86
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
F + A A + ++ W L+T G IF+I + YE+ L+ Q S + S+F+
Sbjct: 87 QFGVFA-AERGDVYGLRKWFLITIILGSIFVIGQAYEYFTLVGHGLSIQSSVYGSAFYIT 145
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G H HV G+I V++++I K + +S +WHF+D++WI +F +Y +
Sbjct: 146 TGFHAAHVIAGVIAFVVVLMRIQKAKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFI 204
>gi|111018143|ref|YP_701115.1| cytochrome c oxidase [Rhodococcus jostii RHA1]
gi|110817673|gb|ABG92957.1| cytochrome c oxidase [Rhodococcus jostii RHA1]
Length = 246
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+ + S + +G ++L S+ + +FA++FV A N+ P +++F
Sbjct: 55 ITQRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMYFVARAQANGNWPPEPTELNLFLAV 114
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ T+VL+ SS +C + A A + + W L+T G F++ + YE+ HL+
Sbjct: 115 PV---TLVLIASSFTCQMGVFA-AERGDVFGLRRWYLLTLAMGTFFVLGQAYEYIHLVEH 170
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
S + S F+ G HG+HV GLI L+ + I +S +WHF
Sbjct: 171 GTSISSSVYGSVFYMTTGFHGMHVIGGLIAFVFLIARTKVSKFTPAQATAAIVVSYYWHF 230
Query: 193 LDLIWICVFSFVYLM 207
+D++WI +F+ +Y +
Sbjct: 231 VDIVWIGLFATIYFI 245
>gi|25028641|ref|NP_738695.1| putative cytochrome c oxidase subunit III [Corynebacterium
efficiens YS-314]
gi|23493927|dbj|BAC18895.1| putative cytochrome c oxidase subunit III [Corynebacterium
efficiens YS-314]
Length = 217
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L + + FA F Y V N A + D ++ T++L+ SS++C
Sbjct: 39 VGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWAEQTDYLNVPYALAITVILVSSSVTC 98
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
F + A A + ++ W L+T G IF+I + YE+ L+ Q S + S+F+
Sbjct: 99 QFGVFA-AERGDVYGLRKWFLITIILGSIFVIGQAYEYFTLVGHGLSIQSSVYGSAFYIT 157
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G H HV G+I V++++I K + +S +WHF+D++WI +F +Y +
Sbjct: 158 TGFHAAHVIAGVIAFVVVLMRIQKAKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFI 216
>gi|123966498|ref|YP_001011579.1| cytochrome c oxidase subunit III [Prochlorococcus marinus str. MIT
9515]
gi|123200864|gb|ABM72472.1| possible cytochrome c oxidase subunit III [Prochlorococcus marinus
str. MIT 9515]
Length = 198
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 19 DKKESCVDHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV 76
+ K + HDG + GF I+L S+ ++F FFV Y+VL + P+ I+ D+ +
Sbjct: 11 NHKPGHIKHDGHNMTGFIIFLCSESIIFFAFFVGYSVLKISAPVWYPSGINGIDVKMPLI 70
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
+T++L+ SS FA K L + W +T G F+ + E++ L
Sbjct: 71 NTVILVSSSFVIYFAEKYLHKKNLWGFRIVWF-ITMIMGSYFVYGQYVEWSEL---TFSL 126
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
Q AF F+ L G HGLHV G++ + +++ + G + + +S+FWHF+D+I
Sbjct: 127 QSGAFGGMFYLLTGFHGLHVITGILLMGLMLYRSFLPNNYKGGEMGVESVSLFWHFVDVI 186
Query: 197 WICVFSFVYL 206
W+ +F +YL
Sbjct: 187 WLLLFGLIYL 196
>gi|226360272|ref|YP_002778050.1| cytochrome c oxidase subunit III [Rhodococcus opacus B4]
gi|226238757|dbj|BAH49105.1| cytochrome c oxidase subunit III [Rhodococcus opacus B4]
Length = 203
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72
+ + S + +G ++L S+ + +FA++FV A N+ P +++F
Sbjct: 12 ITQRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMYFVARAQANGNWPPEPTELNLFLAV 71
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
+ T+VL+ SS +C + A A + + W L+T G F++ + YE+ HL+
Sbjct: 72 PV---TLVLIASSFTCQMGVFA-AERGDVFGLRRWYLLTLAMGTFFVLGQAYEYIHLVEH 127
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
S + S F+ G HG+HV GLI L+ + I +S +WHF
Sbjct: 128 GTSISSSVYGSVFYMTTGFHGMHVIGGLIAFVFLIARTKVSKFTPAQATAAIVVSYYWHF 187
Query: 193 LDLIWICVFSFVYLM 207
+D++WI +F+ +Y +
Sbjct: 188 VDIVWIGLFATIYFI 202
>gi|118465650|ref|YP_881503.1| cytochrome C oxidase, subunit 3 [Mycobacterium avium 104]
gi|254774972|ref|ZP_05216488.1| cytochrome c oxidase, subunit 3 [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118166937|gb|ABK67834.1| cytochrome c oxidase, subunit 3 [Mycobacterium avium 104]
Length = 180
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G + P ++++ + T+VL+ SS +C + A A + +
Sbjct: 20 LFAMYFTARAQSGGKWPPPPTELNLYQAVPV---TLVLIASSFTCQMGVFA-AERGDVFG 75
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++T G+ F++ + YE+ HL+ SA+ S F+ G HGLHV GL+
Sbjct: 76 LRRWYVITFLMGLFFVLGQGYEYYHLMGHGTTIPGSAYGSVFYLATGFHGLHVTGGLVAF 135
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+ + I +S +WHF+D++WI +F+ +Y +
Sbjct: 136 IFLLARTAMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI 179
>gi|119855051|ref|YP_935656.1| cytochrome c oxidase, subunit III [Mycobacterium sp. KMS]
gi|120404674|ref|YP_954503.1| cytochrome c oxidase subunit III [Mycobacterium vanbaalenii PYR-1]
gi|145225946|ref|YP_001136600.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
gi|119697769|gb|ABL94841.1| cytochrome c oxidase, subunit III [Mycobacterium sp. KMS]
gi|119957492|gb|ABM14497.1| cytochrome c oxidase, subunit III [Mycobacterium vanbaalenii PYR-1]
gi|145218409|gb|ABP47812.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
Length = 197
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
+G ++L S+ + FA F Y P P +++ T+VL+ SS +C
Sbjct: 22 VGTIVWLSSELMFFAGLFAMYFTARAQADEWPPPPTELNLALAVPVTLVLIASSFTCQMG 81
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A A + + W +VT G+ F++ + YE+ L+ SA+ S F+ G
Sbjct: 82 VFA-AERGDVFGLRRWYVVTFVMGLFFVLGQGYEYLSLVREGTTIAGSAYGSVFYLTTGF 140
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
HGLHV GL+ +L+I+ I +S +WHF+D++WI +F+ +Y
Sbjct: 141 HGLHVIGGLVAFILLLIRTRMSKFTPAQATAAIVVSYYWHFVDIVWIALFATIY 194
>gi|33861001|ref|NP_892562.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639733|emb|CAE18903.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 200
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E+ H D G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNDIEASEHHEDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHK----TVSWLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ T WLLVTA G+ F+I +++E+ +L
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKALLKNKNSDTQKWLLVTALLGITFLICQLFEYFNL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQIL-KKGLISG-NQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q K+G I+ N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIISWQTRPKEGRITNQNMFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|332308542|ref|YP_004436393.1| cytochrome c oxidase subunit III [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175871|gb|AEE25125.1| cytochrome c oxidase subunit III [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 293
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 76 VSTIVLLLSSLSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SME 133
++T++LL+SS++C FA +A KR K + L +T G IF+++++ E+ H M
Sbjct: 162 INTVILLISSVTCHFAHVALEENKRGRLKLM--LGITVLLGAIFMVLQVEEYLHAYQEMG 219
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
Q + ++FF L G HGLHV G I LF+++++I K + S +WHF+
Sbjct: 220 LTLQSGIYGNTFFLLTGFHGLHVTLGAIILFIMLLRIFKGHFTPDDHFAFQAGSWYWHFV 279
Query: 194 DLIWICVFSFVYLM 207
D++W+ +F FVY++
Sbjct: 280 DVVWVMLFFFVYIL 293
>gi|302518592|ref|ZP_07270934.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sp. SPB78]
gi|318060651|ref|ZP_07979374.1| cytochrome c oxidase subunit III [Streptomyces sp. SA3_actG]
gi|318076660|ref|ZP_07983992.1| cytochrome c oxidase subunit III [Streptomyces sp. SA3_actF]
gi|333027726|ref|ZP_08455790.1| putative cytochrome aa3 quinol oxidase, subunit III [Streptomyces
sp. Tu6071]
gi|302427487|gb|EFK99302.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sp. SPB78]
gi|332747578|gb|EGJ78019.1| putative cytochrome aa3 quinol oxidase, subunit III [Streptomyces
sp. Tu6071]
Length = 206
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP----IDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y L GP D ++ +T +L+ SS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTL--RSVTGPEHWKEMADALNVPFSGTNTAILVASS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W +T G IFI +I+E+ L+ E + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRTWFSITFVMGAIFIGGQIFEYTDLVKEEGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHHQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+YL+
Sbjct: 202 IYLI 205
>gi|15827405|ref|NP_301668.1| cytochrome C oxidase subunit III [Mycobacterium leprae TN]
gi|221229882|ref|YP_002503298.1| cytochrome C oxidase subunit III [Mycobacterium leprae Br4923]
gi|62899906|sp|O69582|COX3_MYCLE RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|3080503|emb|CAA18701.1| cytochrome c oxidase subunit III [Mycobacterium leprae]
gi|13092955|emb|CAC31263.1| cytochrome C oxidase subunit III [Mycobacterium leprae]
gi|219932989|emb|CAR70977.1| cytochrome C oxidase subunit III [Mycobacterium leprae Br4923]
Length = 202
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76
+ + S + +G ++L S+ + FA F Y P ++
Sbjct: 12 ITSRVHSLNRPNMVSVGTVVWLSSELMFFAGLFAMYFTARAQAGGKWPPSTELNLYQAVP 71
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
T+VL+ SS +C + SA + + W ++T G+ F++ + YE+ HLI+
Sbjct: 72 VTLVLIASSFTCQMGVF-SAERGDVFGLRRWYVITLLMGLFFVLGQGYEYYHLITHGTTI 130
Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
SA+ S F+ G HGLHV GLI L+ + I +S +WHF+D++
Sbjct: 131 PSSAYGSVFYLATGFHGLHVTGGLIAFIFLLARTTMSKFTPAQATASIVVSYYWHFVDIV 190
Query: 197 WICVFSFVYLM 207
WI +F+ +Y +
Sbjct: 191 WIALFTVIYFI 201
>gi|169629056|ref|YP_001702705.1| cytochrome c oxidase subunit III [Mycobacterium abscessus ATCC
19977]
gi|169241023|emb|CAM62051.1| Probable cytochrome c oxidase subunit III [Mycobacterium abscessus]
Length = 206
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS-TIVLLLSSLSCSFAMLASATKRLIH 102
+FA +F A G N+ P +++ G+ + T VL+ SS +C + A A + +
Sbjct: 46 LFAFYFTARAQSGGNWPPEPTELNL----GLAIPVTAVLVASSFTCQMGVFA-AERGDVF 100
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
W ++T G F++ + YE+ +L+ SA+ S+F+ G HGLHV GL+
Sbjct: 101 GLRRWYVITLIMGTFFVLGQGYEYMNLVHEGTTIAGSAYGSTFYLATGFHGLHVIGGLVA 160
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
L+I+ I +S +WHF+D++WI +F+ +Y
Sbjct: 161 FVYLLIRTRMSKFTPAQATSAIVVSYYWHFVDIVWIALFATIY 203
>gi|262202947|ref|YP_003274155.1| cytochrome-c oxidase [Gordonia bronchialis DSM 43247]
gi|262086294|gb|ACY22262.1| Cytochrome-c oxidase [Gordonia bronchialis DSM 43247]
Length = 205
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG---PAPIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L S+ + FA F Y V N A PA +++ T VL+LSS++C
Sbjct: 27 VGTIVWLSSELMFFAGLFAMYFVARANSPADIGWPAKPTELNLALAIPVTTVLILSSVTC 86
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
+ A A + + W ++T G F+ + YE+ HL+ SA+ S F+
Sbjct: 87 QMGVFA-AERGDVFGLRRWYVLTFLMGAFFVAGQGYEYYHLVHEGTTLSSSAYGSVFYMA 145
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GL+ L+I+ I +S +WHF+D++WI +F +Y
Sbjct: 146 TGFHGLHVIGGLVAFVFLLIRTKLSKFTPAQATAAIVVSYYWHFVDIVWIGLFVTIY 202
>gi|86157232|ref|YP_464017.1| cytochrome c oxidase, subunit III [Anaeromyxobacter dehalogenans
2CP-C]
gi|85773743|gb|ABC80580.1| cytochrome c oxidase, subunit III [Anaeromyxobacter dehalogenans
2CP-C]
Length = 209
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID-VFDISGIFVST 78
+K+S + LG W++L S+ L+F F YAV Y+ A + V+T
Sbjct: 14 EKQSHAER----LGMWLFLASEVLLFTALFAAYAVYRYLYSDAFAEASRAIETWFGLVNT 69
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
I+L+ SS + + L A K KT W V+ F + F+ ++ E++H +P R
Sbjct: 70 IILVTSSFTVALG-LNEAVKGNGKKTGLWFAVSVAFAIAFLALKAVEYSHHFQEGQLPGR 128
Query: 139 ------------SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
S F S +F + GLHG+HV G+ L V+ ++ + + +
Sbjct: 129 YYSFHELQAPGASLFFSLYFLITGLHGVHVIVGMTILAVVGVKAARGKYTAAYHTPVELA 188
Query: 187 SMFWHFLDLIWICVFSFVYLM 207
++WH +DLIWI VF +YL+
Sbjct: 189 GLYWHLVDLIWIFVFPLIYLV 209
>gi|167842203|ref|ZP_02468887.1| ubiquinol oxidase, subunit III [Burkholderia thailandensis MSMB43]
Length = 113
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 20 KKESCVDHDGTY--LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
+ ++ DH ++ GFW+YLM+DC++FA F +AV+ +A GP +D+FDI G+ +
Sbjct: 10 RHQAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALE 69
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTV--SWLLVTAFFGMIFIIME 122
T +LLLSS++ FAM+ + R + V WL +T G F+ +E
Sbjct: 70 TALLLLSSITYGFAMIGAQRGR---RGVLFGWLAMTFALGAAFLGLE 113
>gi|259507700|ref|ZP_05750600.1| cytochrome c oxidase, subunit III [Corynebacterium efficiens
YS-314]
gi|259164747|gb|EEW49301.1| cytochrome c oxidase, subunit III [Corynebacterium efficiens
YS-314]
Length = 182
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA---PIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L + + FA F Y V N A + D ++ T++L+ SS++C
Sbjct: 4 VGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWAEQTDYLNVPYALAITVILVSSSVTC 63
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
F + A A + ++ W L+T G IF+I + YE+ L+ Q S + S+F+
Sbjct: 64 QFGVFA-AERGDVYGLRKWFLITIILGSIFVIGQAYEYFTLVGHGLSIQSSVYGSAFYIT 122
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G H HV G+I V++++I K + +S +WHF+D++WI +F +Y +
Sbjct: 123 TGFHAAHVIAGVIAFVVVLMRIQKAKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFI 181
>gi|222083087|ref|YP_002542452.1| cytochrome-c oxidase subunit III protein [Agrobacterium radiobacter
K84]
gi|221727766|gb|ACM30855.1| cytochrome-c oxidase subunit III protein [Agrobacterium radiobacter
K84]
Length = 240
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLG-KNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y A P P +VF +I I ++ + +L S
Sbjct: 44 WIFLLSDTFIFGCFLLAYMTARMSTTVAWPNPSEVFALTIGGKEIPLILIAIMTFVLISS 103
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + + KT + +L TA G F+ M+ +E+ LI P +
Sbjct: 104 SGTMAMAVNFGYRHDRSKTAALMLATAVLGATFVGMQAFEWTKLIREGVRPWENPWGAAQ 163
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLIS---GNQRRLICLSMFW 190
F SSFF + G HG HV G+++L ++ ++ + +G + G+ + ++W
Sbjct: 164 FGSSFFMITGFHGTHVSIGVLFLLIMARKVWRGDFDQERRGFFTSRKGHYEIIEITGLYW 223
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 224 HFVDLVWVFIFAFFYL 239
>gi|307332166|ref|ZP_07611251.1| Cytochrome-c oxidase [Streptomyces violaceusniger Tu 4113]
gi|306882195|gb|EFN13296.1| Cytochrome-c oxidase [Streptomyces violaceusniger Tu 4113]
Length = 206
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGAEHWKEMASSLNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W ++T G IFI +I+E+ L+ + + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRTWFVITFIMGAIFIGGQIFEYTELVKKDGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGL-IWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HG+HV GL +LFVL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGMHVTGGLFAFLFVLGRTYAAKRFTHQQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|16330564|ref|NP_441292.1| cytochrome C oxidase subunit III [Synechocystis sp. PCC 6803]
gi|1653055|dbj|BAA17972.1| cytochrome c oxidase subunit III [Synechocystis sp. PCC 6803]
Length = 198
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG-KNYAAGPAPIDVFDIS 72
L +V+ +E D+ G GF ++LMS+ ++F FFVTY +L N P +D D++
Sbjct: 7 LPHVEPTEEQEPDNLG--FGFPVFLMSESVVFISFFVTYTILRLTNKPWFPPGVDGLDVT 64
Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132
++T+VL+ SS + A A + + WL T G++F+ + E+A M
Sbjct: 65 RGAINTMVLVTSSGAIILAEKALHRGEMKLFRLLWL-ATISLGIVFLFGQAAEWA---GM 120
Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192
+ +FF L G HGLHVF G+ L + + L+ + +++FWHF
Sbjct: 121 PFGLDAGSAGGTFFLLTGFHGLHVFTGVCLLLYMYWRSLQPHNFDRGHEGVTAIALFWHF 180
Query: 193 LDLIWICVFSFVYL 206
+D+IWI +F +YL
Sbjct: 181 VDVIWIILFILLYL 194
>gi|159039067|ref|YP_001538320.1| cytochrome c oxidase subunit III [Salinispora arenicola CNS-205]
gi|157917902|gb|ABV99329.1| cytochrome c oxidase subunit III [Salinispora arenicola CNS-205]
Length = 199
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISG 73
K + S + +G ++L S+ + FA F Y A + +A ++V +
Sbjct: 9 KSRIHSLTRPNMVSVGTIVWLSSELMFFAALFAMYFSIRAAAPEQWAEHTPHLNV-PYAT 67
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
F T++L+LSS++C + A A K +H W +T G+IF++ ++ E+ L+
Sbjct: 68 TF--TVILVLSSVTCQLGVFA-AEKGDVHALRRWFTITFVMGLIFVLGQLNEYRELVHEG 124
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
+ S F+ G HGLHV GL+ + +I+ I +S +WHF+
Sbjct: 125 VKINEDGYGSMFYLTTGFHGLHVTGGLVAFIIFMIRTTMGRFTPAQATSAIVVSYYWHFV 184
Query: 194 DLIWICVFSFVY 205
D++WI ++ +Y
Sbjct: 185 DVVWIALYGMIY 196
>gi|145223543|ref|YP_001134221.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
gi|145216029|gb|ABP45433.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK]
Length = 220
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G ++ P P ++ +++ T+VL+ SS +C + A A + +
Sbjct: 60 LFAMYFTARAQAGGDWP--PEPTEL-NLALAVPVTLVLIASSFTCQMGVFA-AERGDVFG 115
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W +T G F++ + YE+ HL+ SA+ + F+ G HGLHV GLI
Sbjct: 116 LRRWYTLTLAMGTFFVLGQAYEYLHLVQHGTTIPGSAYGTVFYLATGFHGLHVIGGLIAF 175
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
+L+++ I +S +WHF+D++WI +F+ +Y
Sbjct: 176 VLLLLRTRMSKFTPAQATAAIVVSYYWHFVDIVWIALFAVIY 217
>gi|295839375|ref|ZP_06826308.1| cytoChrome c oxidase subunit III [Streptomyces sp. SPB74]
gi|197699063|gb|EDY45996.1| cytoChrome c oxidase subunit III [Streptomyces sp. SPB74]
Length = 206
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G ++ A D ++ +T +L+ SS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPDHWKEMA--DALNVPFSGTNTAILVASS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W +T G IFI +I+E+ L+ + + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRTWFSITFVMGAIFIGGQIFEYTELVKKDGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHHQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+YL+
Sbjct: 202 IYLI 205
>gi|145595810|ref|YP_001160107.1| cytochrome c oxidase, subunit III [Salinispora tropica CNB-440]
gi|145305147|gb|ABP55729.1| cytochrome c oxidase, subunit III [Salinispora tropica CNB-440]
Length = 199
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISG 73
K + S + +G ++L S+ + FA F Y A + +A ++V +
Sbjct: 9 KSRIHSLTRPNMVSVGTIVWLSSELMFFAALFAMYFSIRAAAPEQWAEHTPHLNV-PYAT 67
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
F T++L+LSS++C + A A K +H W +T G+IF++ ++ E+ LI
Sbjct: 68 TF--TVILVLSSVTCQIGVFA-AEKGDVHALRRWFTITFVMGLIFVLGQLNEYRELIHEG 124
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
+ S F+ G HGLHV GL+ + +I+ I +S +WHF+
Sbjct: 125 IKINEDGYGSMFYLTTGFHGLHVAGGLVAFVIFMIRTTMGRFTPAQATSAIVVSYYWHFV 184
Query: 194 DLIWICVFSFVY 205
D++WI +++ +Y
Sbjct: 185 DVVWIALYAMIY 196
>gi|315443889|ref|YP_004076768.1| heme/copper-type cytochrome/quinol oxidase subunit 3 [Mycobacterium
sp. Spyr1]
gi|315262192|gb|ADT98933.1| heme/copper-type cytochrome/quinol oxidase, subunit 3
[Mycobacterium sp. Spyr1]
Length = 203
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G ++ P P ++ +++ T+VL+ SS +C + A A + +
Sbjct: 43 LFAMYFTARAQAGGDWP--PEPTEL-NLALAVPVTLVLIASSFTCQMGVFA-AERGDVFG 98
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W +T G F++ + YE+ HL+ SA+ + F+ G HGLHV GLI
Sbjct: 99 LRRWYTLTLAMGTFFVLGQAYEYLHLVQHGTTIPGSAYGTVFYLATGFHGLHVIGGLIAF 158
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
+L+++ I +S +WHF+D++WI +F+ +Y
Sbjct: 159 VLLLLRTRMSKFTPAQATAAIVVSYYWHFVDIVWIALFAVIY 200
>gi|127511056|ref|YP_001092253.1| cytochrome c oxidase, subunit III [Shewanella loihica PV-4]
gi|126636351|gb|ABO21994.1| cytochrome c oxidase, subunit III [Shewanella loihica PV-4]
Length = 291
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
+TI+LL SS++ FA ++ + T+ WL +T G+ F+ ++ E+AH +
Sbjct: 161 NTIILLTSSVTLHFAHVSLEKSKRTALTL-WLGITILLGLAFLFLQAKEYAHAYQEMGLT 219
Query: 137 QRSA-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
S + ++FF L G HG+HV G I+LFVL +++L+ S +WHF+D+
Sbjct: 220 LSSGVYGNTFFLLTGFHGMHVTLGTIFLFVLFLRVLRGHFTPDKHFAFQAGSWYWHFVDV 279
Query: 196 IWICVFSFVYLM 207
+W+C+F FVY++
Sbjct: 280 VWLCLFVFVYVL 291
>gi|54023694|ref|YP_117936.1| putative cytochrome c oxidase subunit III [Nocardia farcinica IFM
10152]
gi|62899935|sp|Q5YZ19|COX3_NOCFA RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|54015202|dbj|BAD56572.1| putative cytochrome c oxidase subunit III [Nocardia farcinica IFM
10152]
Length = 203
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 8/180 (4%)
Query: 32 LGFWIYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G I+L S+ + +FA++FV A N+ P P ++ ++ T VL+ SS +
Sbjct: 27 VGTIIWLSSELMFFAGLFAMYFVARAQANGNWP--PEPTEL-NLKLAVPVTAVLVASSFT 83
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
C + A A K + W +T G F+ + YE+ HL+ SA+ S F+
Sbjct: 84 CQMGVFA-AEKGDVFGLRRWYFITLLMGAFFVAGQGYEYYHLVHEGTSISSSAYGSVFYI 142
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
G HGLHV GLI L+I+ I +S +WHF+D++WI +F+ +Y +
Sbjct: 143 TTGFHGLHVIGGLIAFVFLLIRTKVSKFTPAQATAAIVVSYYWHFVDIVWIGLFATIYFV 202
>gi|54302069|ref|YP_132062.1| putative cytochrome c oxidase subunit III [Photobacterium profundum
SS9]
gi|46915490|emb|CAG22262.1| putative cytochrome c oxidase subunit III [Photobacterium profundum
SS9]
Length = 249
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 26/196 (13%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
W +L+SD +F F V Y +V P DVF DI + ++ + +L +
Sbjct: 55 WFFLLSDIFIFGSFLVAYMSVRMTTTEPWPLTSDVFALNLGGQDIPLVLIAIMTFILITS 114
Query: 87 SCSFAMLAS---ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ------ 137
S + AM + +R + T+ + +TA FG+ F+ M+ +E+ LI E +
Sbjct: 115 SGTMAMAVNFGYQGRRQLTATL--IFITALFGLAFVGMQAFEWTKLIVEEGIRPWGNDLG 172
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK------KGLISGNQRRLICLS-MFW 190
+ F +SFF + G HGLHV G+I+L + ++ + + S N+ ++ ++ ++W
Sbjct: 173 AAQFGASFFMITGFHGLHVSIGVIYLLTIAWRVWRGRYEKTQSDDSTNRYEIVEIAGLYW 232
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 233 HFVDLVWVFIFAFFYL 248
>gi|302525353|ref|ZP_07277695.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sp. AA4]
gi|302434248|gb|EFL06064.1| cytochrome aa3 quinol oxidase, subunit III [Streptomyces sp. AA4]
Length = 208
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG---PAPIDV----F 69
+ + S + +G ++L S+ + FA F + + AG P P+
Sbjct: 11 ISQRVHSLNRPNMVSVGTVVWLSSELMFFAGLFAMFFTVKAQNPAGASWPPPLHGEEFHL 70
Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129
+++ T++L+LSSL+C F + A A + ++ W +VT G IF+ + E+ +L
Sbjct: 71 NVAYAIPFTVILVLSSLTCQFGVFA-AERGDVYGLRRWYIVTLIMGAIFVFGQANEYHNL 129
Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189
+ F + F+ G HGLHV GLI L+++ I +S +
Sbjct: 130 VEEGLTIPSGPFGTVFYLATGFHGLHVIGGLIAFVFLLVRTKLSKFTPAQATSAIVVSYY 189
Query: 190 WHFLDLIWICVFSFVYLM 207
WHF+D++W+ +F+ +Y++
Sbjct: 190 WHFVDIVWVGLFAVIYIL 207
>gi|296166061|ref|ZP_06848508.1| cytochrome c oxidase, subunit III [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898582|gb|EFG78141.1| cytochrome c oxidase, subunit III [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 180
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G + P ++++ + T+VL+ SS +C + A A + +
Sbjct: 20 LFAMYFTARAQSGGKWPPPPTELNLYQAVPV---TLVLIASSFTCQMGVFA-AERGDVFG 75
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++T G+ F+ + YE+ HL + SA+ S F+ G HGLHV GLI
Sbjct: 76 LRRWYVITFLMGLFFVCGQGYEYYHLATHGTTIPGSAYGSVFYLATGFHGLHVTGGLIAF 135
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+ + I +S +WHF+D++WI +F+ +Y +
Sbjct: 136 IFLLARTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI 179
>gi|118467557|ref|YP_888537.1| cytochrome C oxidase subunit 3 [Mycobacterium smegmatis str. MC2
155]
gi|118168844|gb|ABK69740.1| cytochrome c oxidase subunit 3 [Mycobacterium smegmatis str. MC2
155]
Length = 203
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG---PAPIDVFDISG 73
+ + S + +G ++L S+ + FA F Y + A G P P ++ +++
Sbjct: 12 ITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMY-FTARAQAGGAWPPEPTEL-NLAL 69
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
T+VL+ SS +C + A A + + W ++T G+ F++ + YE+ HL+
Sbjct: 70 AVPVTLVLIASSFTCQMGVFA-AERGDVFGLRRWYVITFLMGLFFVLGQGYEYIHLVEHG 128
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
SA+ S F+ G HGLHV GL+ +L+ + I +S +WHF+
Sbjct: 129 TTIPGSAYGSVFYLATGFHGLHVIGGLVAFVLLLARTKMSKFTPAQATAAIVVSYYWHFV 188
Query: 194 DLIWICVFSFVY 205
D++WI +F+ +Y
Sbjct: 189 DIVWIALFATIY 200
>gi|331696571|ref|YP_004332810.1| cytochrome-c oxidase [Pseudonocardia dioxanivorans CB1190]
gi|326951260|gb|AEA24957.1| Cytochrome-c oxidase [Pseudonocardia dioxanivorans CB1190]
Length = 200
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 9 SPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPID 67
+PN S + + V +G ++L S+ + FA F Y +N P P
Sbjct: 5 APNISARIHSLNRPNLVS-----IGTIVWLSSELMFFAGLFSIYFTARAQNVGEWPPPPT 59
Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127
D+ V TIVL+ SS +C F + A A + + W L+T G +F++ + E+
Sbjct: 60 ELDVPYALVVTIVLVASSFTCQFGVFA-AERGDVFGLRRWYLLTLIMGALFVLGQANEYR 118
Query: 128 HLI-SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
LI SA+ + F+ G H LHV GL+ L+I+ I +
Sbjct: 119 TLIFEHHTTIASSAYGTVFYLATGFHALHVTGGLVAFVYLLIRTKLSKFTPAQATAAIVV 178
Query: 187 SMFWHFLDLIWICVFSFVYLM 207
S +WHF+D++W+ +F+ +Y +
Sbjct: 179 SYYWHFVDVVWVGLFAVIYFI 199
>gi|254482080|ref|ZP_05095322.1| Cytochrome c oxidase subunit III subfamily protein [marine gamma
proteobacterium HTCC2148]
gi|214037770|gb|EEB78435.1| Cytochrome c oxidase subunit III subfamily protein [marine gamma
proteobacterium HTCC2148]
Length = 227
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP--IDVFDIS--G-------IFVSTIVLLL 83
WI+L+SD +F+VF Y + + A P P +VF ++ G I + T VL+
Sbjct: 40 WIFLLSDTFIFSVFLTGY-MHARLAATEPWPNSSEVFALTLFGSHLPLVLIAIMTFVLIT 98
Query: 84 SSLSCSFAM-LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQ 137
SS + + A+ A + R KTV + TA G F+ M+ +E++ LI E V P
Sbjct: 99 SSGTMAMAVNFAYSGNR--SKTVMLMAATALLGASFVGMQAFEWSKLIFEEGVRPWGNPM 156
Query: 138 RSA-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196
+A F S+FF + G HGLHV G+I+L V+ ++ + + ++WHF+DL+
Sbjct: 157 GAAQFGSTFFMITGFHGLHVTAGVIYLSVVAFKVRRGDYEKKGYEIVEITGLYWHFVDLV 216
Query: 197 WICVFSFVYL 206
W+ +F+F YL
Sbjct: 217 WVFIFAFFYL 226
>gi|291004312|ref|ZP_06562285.1| cytochrome c oxidase subunit III [Saccharopolyspora erythraea NRRL
2338]
Length = 189
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 36 IYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLA 94
++L S+ + FA F + V +N P P ++ TI+L+ SS +C + + A
Sbjct: 16 VWLASELMFFAGLFAMFFTVKAQNEGEWPPPPTHLNLPYALPFTIILVASSFTCQWGVFA 75
Query: 95 SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-QRSAFLSSFFALVGLHG 153
A + ++ W ++T G +F++ + E+ LI+ SA+ + F+ G HG
Sbjct: 76 -AERGDVYGLRRWYVITLIMGTVFVLGQAGEYYQLITEHHTTIASSAYGTVFYMTTGFHG 134
Query: 154 LHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LHV GLI L+++ I +S +WHF+D++WI +F+ +YL+
Sbjct: 135 LHVIGGLIAFVFLIVRTRLSKFTPAQAIAAIVVSYYWHFVDIVWIGLFAVIYLV 188
>gi|229490418|ref|ZP_04384259.1| cytochrome c oxidase subunit 3 [Rhodococcus erythropolis SK121]
gi|229322708|gb|EEN88488.1| cytochrome c oxidase subunit 3 [Rhodococcus erythropolis SK121]
Length = 298
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 32 LGFWIYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G ++L S+ + +FA++FV A N+ P ++++ + T+VL+ SS +
Sbjct: 122 VGTIVWLSSELMFFAGLFAMYFVARAQANGNWPPEPTELNLYLAVPV---TLVLIASSFT 178
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
C + A A + + W +T G F+ + YE+ HL+ S + S F+
Sbjct: 179 CQMGVFA-AERGDVFGLRRWYTITLVMGAFFVAGQGYEYYHLVHEGTTISSSVYGSVFYM 237
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GLI L+ + I +S +WHF+D++WI +F+ +Y
Sbjct: 238 TTGFHGLHVIGGLIAFVFLIARTRVSKFTPAQATAAIVVSYYWHFVDIVWIALFATIY 295
>gi|254822835|ref|ZP_05227836.1| cytochrome c oxidase, subunit 3 [Mycobacterium intracellulare ATCC
13950]
Length = 180
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G + P ++++ + T+VL+ SS +C + A A + +
Sbjct: 20 LFAMYFTARAQSGGKWPPPPTELNLYQAVPV---TLVLIASSFTCQMGVFA-AERGDVFG 75
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++T G+ F+ + YE+ HL + SA+ S F+ G HGLHV GL+
Sbjct: 76 LRRWYVITFLMGLFFVCGQGYEYFHLATHGTTIPGSAYGSVFYLATGFHGLHVTGGLVAF 135
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+ + I +S +WHF+D++WI +F+ +Y +
Sbjct: 136 IFLLARTAMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI 179
>gi|284043361|ref|YP_003393701.1| cytochrome-c oxidase [Conexibacter woesei DSM 14684]
gi|283947582|gb|ADB50326.1| Cytochrome-c oxidase [Conexibacter woesei DSM 14684]
Length = 208
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF--VSTIVLLLSS 85
D LG ++++S+ ++F FF Y + + P P + ++ + V+T +LL SS
Sbjct: 32 DPQMLGMLLFIISEIMVFGAFFTAYFFI-RVVDGNPWPAEGTELPKLIAGVNTAILLSSS 90
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFF-GMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
++ +A+ A KR + T F G F+ ++I E+ +++ P SA S
Sbjct: 91 ITLHWAL--EAVKRGNRGAFKAGMATTFLLGATFLFVQINEY---VNIGFAPYDSAQASV 145
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204
F+ L GLHG HV GL+ L ++ ++ + + R + ++WHF+D++W+ V+S V
Sbjct: 146 FYGLTGLHGAHVALGLMILLMVTVRAFRGHFSAEEHRGVEIPGIYWHFVDVMWVVVYSTV 205
Query: 205 YLM 207
YL+
Sbjct: 206 YLL 208
>gi|182439150|ref|YP_001826869.1| putative cytochrome c oxidase subunit III [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|291444071|ref|ZP_06583461.1| cytochrome c oxidase subunit III [Streptomyces roseosporus NRRL
15998]
gi|326779802|ref|ZP_08239067.1| Cytochrome-c oxidase [Streptomyces cf. griseus XylebKG-1]
gi|178467666|dbj|BAG22186.1| putative cytochrome c oxidase subunit III [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|291347018|gb|EFE73922.1| cytochrome c oxidase subunit III [Streptomyces roseosporus NRRL
15998]
gi|326660135|gb|EGE44981.1| Cytochrome-c oxidase [Streptomyces cf. griseus XylebKG-1]
Length = 206
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V+G +Y + F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVMGPDYWKEMSDHLNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K +W ++T G IFI ++ E+ L+ + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRTWFIITFVMGAIFIGGQVLEYTELVKDAGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL K I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAAKRFTHDQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|226307082|ref|YP_002767042.1| cytochrome c oxidase subunit III [Rhodococcus erythropolis PR4]
gi|226186199|dbj|BAH34303.1| cytochrome c oxidase subunit III [Rhodococcus erythropolis PR4]
Length = 203
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV A N+ P ++++ + T+VL+ SS +C + A A + +
Sbjct: 43 LFAMYFVARAQANGNWPPEPTELNLYLAVPV---TLVLIASSFTCQMGVFA-AERGDVFG 98
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W +T G F+ + YE+ HL+ S + S F+ G HGLHV GLI
Sbjct: 99 LRRWYTITLIMGAFFVSGQGYEYYHLVHEGTTISSSVYGSVFYMTTGFHGLHVIGGLIAF 158
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+ + I +S +WHF+D++WI +F+ +Y +
Sbjct: 159 VFLIARTRVSKFTPAQATAAIVVSYYWHFVDIVWIALFATIYFI 202
>gi|294138778|ref|YP_003554756.1| cytochrome c oxidase subunit III [Shewanella violacea DSS12]
gi|293325247|dbj|BAI99977.1| cytochrome c oxidase subunit III [Shewanella violacea DSS12]
Length = 230
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 17/188 (9%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSL 86
W++L+SD +F+VF + Y V + + P +VF I+G + ++ + +L +
Sbjct: 43 WLFLLSDTFVFSVFLIGYMNVRMSSMDSWPLTSEVFALTIAGHHIPLVLIAIMTFILITS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQRSA 140
S + AM + A + KTV ++ TA G F+ M+ +E+ LI E V P SA
Sbjct: 103 SGTMAMAVNFAYRGDRRKTVLFMTATALLGASFVGMQAFEWTKLIVEEGVRPWGNPMGSA 162
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIWI 198
F ++FF + G HGLHV G+I+L V+ ++ +G G ++ ++ ++WHF+DL+W+
Sbjct: 163 QFGATFFMITGFHGLHVTAGVIFLLVIARRV-ARGHYEGKGYHIVEITGLYWHFVDLVWV 221
Query: 199 CVFSFVYL 206
+F+ YL
Sbjct: 222 FIFALFYL 229
>gi|296129919|ref|YP_003637169.1| Cytochrome-c oxidase [Cellulomonas flavigena DSM 20109]
gi|296021734|gb|ADG74970.1| Cytochrome-c oxidase [Cellulomonas flavigena DSM 20109]
Length = 215
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 36 IYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
++L S+ + +FA++F A + + +A D ++ F +T +L+LSS++C
Sbjct: 31 VWLASELMFFAGLFAMYFTVRAAVPEEWAI---QTDKLNLQFAFANTAILVLSSVTCQMG 87
Query: 92 MLASATKRLIHKTV----------SWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
+ A+ + + W+ +T G +FI +I+E+A L+ S +
Sbjct: 88 VWAAERLQPVRSGSLVQFWRWGMNEWMTLTYVMGAVFIGGQIFEYAELVEHGLTISSSPY 147
Query: 142 LSSFFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
S F+ G HGLHV GLI +LF+L K + I S +WHF+D++WI +
Sbjct: 148 GSVFYLTTGFHGLHVVGGLIAFLFLLGRSFAAKRFTHHEETTAIVTSYYWHFVDVVWIAL 207
Query: 201 FSFVYLM 207
F+ +YL+
Sbjct: 208 FAVIYLV 214
>gi|317121252|ref|YP_004101255.1| cytochrome C oxidase subunit III [Thermaerobacter marianensis DSM
12885]
gi|315591232|gb|ADU50528.1| cytochrome c oxidase subunit III [Thermaerobacter marianensis DSM
12885]
Length = 214
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV--LLLSSLSCS 89
LG WI+L SD L+FA Y V AG P G+++ T++ +L+SS S
Sbjct: 37 LGMWIFLASDVLVFATLLTAYGV--ARLKAGTWPDRTHIFEGLWLVTLMTFILISSSSTM 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA--------VPQRSAF 141
A + +A + V +LL+T G+ F+ + +E+ LI A VPQ SA
Sbjct: 95 AAAVGAARRGDQKAAVRFLLLTILGGLFFLGSQAFEWTSLIREGARLMSNPWGVPQFSA- 153
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
SFF + G HG HV GLI+L V+ + + +G SG + L +WHF+DL+W+ +F
Sbjct: 154 --SFFVITGFHGFHVLTGLIYLAVITLNAM-RGRYSGLGVEVAGL--YWHFVDLVWVFIF 208
Query: 202 SFVYLM 207
+ YL+
Sbjct: 209 TLFYLI 214
>gi|262279558|ref|ZP_06057343.1| LOW QUALITY PROTEIN: cytochrome o ubiquinol oxidase subunit III
[Acinetobacter calcoaceticus RUH2202]
gi|262259909|gb|EEY78642.1| LOW QUALITY PROTEIN: cytochrome o ubiquinol oxidase subunit III
[Acinetobacter calcoaceticus RUH2202]
Length = 128
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF--DISGIFVSTIVLLLSSL 86
T GFW YLMSD ++F F+ +AVL + G P+ D+F + + T LL+SS+
Sbjct: 24 TVFGFWTYLMSDLILFGSLFIAFAVLSSHIPPGTPSAYDLFHDSLGYVLTETFALLISSV 83
Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130
+ FA+LAS K +++ ++WL +T FG FI MEIYEF HL+
Sbjct: 84 TFGFAVLASYKKN-VNQVITWLFITFLFGATFIGMEIYEFHHLV 126
>gi|72383611|ref|YP_292966.1| cytochrome c oxidase subunit III [Prochlorococcus marinus str.
NATL2A]
gi|72003461|gb|AAZ59263.1| cytochrome c oxidase subunit III [Prochlorococcus marinus str.
NATL2A]
Length = 201
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
K++ + D G +L++D + FA FF Y GP I ++ ++
Sbjct: 14 KNELSTEEHEDFRLFGLIAFLIADGMTFAGFFAAYLTFKAVNPIGPDAIYELELPLPTLN 73
Query: 78 TIVLLLSSLSCSFA--MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
TI+LL+SS + A L +L K WLL+T G+ F+I +++E+ ++
Sbjct: 74 TILLLVSSFTFHRAGKFLEKNESKLCQK---WLLITGVLGVAFLISQMFEY---FTLPFG 127
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI--CLSMFWHFL 193
+ F S+F+AL G HGLHV G I + ++ Q NQ + + ++WHF+
Sbjct: 128 LTDNLFASTFYALTGFHGLHVTLGSIMIMIIWWQTRVPSGRVNNQNKFPFEAVELYWHFV 187
Query: 194 DLIWICVFSFVYLM 207
D IW+ +F +YL+
Sbjct: 188 DGIWVVLFIILYLL 201
>gi|311895599|dbj|BAJ28007.1| putative cytochrome c oxidase subunit III [Kitasatospora setae
KM-6054]
Length = 206
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Query: 32 LGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G ++L S+ + FA F Y +V G + A ++ V+T +L+LSSL+
Sbjct: 27 VGTIVWLSSELMFFAALFAMYFTLRSVKGTEFWHEKA--HALNVPFSSVNTTILVLSSLT 84
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSSFF 146
C + A A + + K SW +T G IFI +IYE+ L+ + + S + + F+
Sbjct: 85 CQLGVFA-AERGDVKKLRSWFSITFVMGAIFIGGQIYEYTELVKKDGLSLSSDPYGTVFY 143
Query: 147 ALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GLI +L VL + I +S +WHF+D++WI +F+ +Y
Sbjct: 144 LTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFATIY 203
Query: 206 LM 207
L+
Sbjct: 204 LI 205
>gi|134098267|ref|YP_001103928.1| cytochrome c oxidase subunit III [Saccharopolyspora erythraea NRRL
2338]
gi|133910890|emb|CAM01003.1| cytochrome c oxidase subunit III [Saccharopolyspora erythraea NRRL
2338]
Length = 181
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 36 IYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLA 94
++L S+ + FA F + V +N P P ++ TI+L+ SS +C + + A
Sbjct: 8 VWLASELMFFAGLFAMFFTVKAQNEGEWPPPPTHLNLPYALPFTIILVASSFTCQWGVFA 67
Query: 95 SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-QRSAFLSSFFALVGLHG 153
A + ++ W ++T G +F++ + E+ LI+ SA+ + F+ G HG
Sbjct: 68 -AERGDVYGLRRWYVITLIMGTVFVLGQAGEYYQLITEHHTTIASSAYGTVFYMTTGFHG 126
Query: 154 LHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
LHV GLI L+++ I +S +WHF+D++WI +F+ +YL+
Sbjct: 127 LHVIGGLIAFVFLIVRTRLSKFTPAQAIAAIVVSYYWHFVDIVWIGLFAVIYLV 180
>gi|90411372|ref|ZP_01219383.1| putative cytochrome c oxidase subunit III [Photobacterium profundum
3TCK]
gi|90327585|gb|EAS43928.1| putative cytochrome c oxidase subunit III [Photobacterium profundum
3TCK]
Length = 249
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 22/194 (11%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF-------DISGIFVSTIVLLLSSL 86
W++L+SD +F F V Y +V + P DVF DI + ++ + +L +
Sbjct: 55 WLFLLSDIFIFGSFLVAYMSVRMTTTESWPLTSDVFALNLGGQDIPLVLIAIMTFILITS 114
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ------RS 139
S + AM + + T + + +TA FG+ F+ M+ +E+ LI E + +
Sbjct: 115 SGTMAMAVNFGYQGRRQLTAALIFITALFGLAFVGMQAFEWTKLIVEEGIRPWGNDLGAA 174
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQIL------KKGLISGNQRRLICLS-MFWHF 192
F +SFF + G HGLHV G+I+L + ++ + S N+ ++ ++ ++WHF
Sbjct: 175 QFGASFFMITGFHGLHVSIGVIYLLTIAWRVWCGRYEKTQSDNSTNRYEIVEIAGLYWHF 234
Query: 193 LDLIWICVFSFVYL 206
+DL+W+ +F+F YL
Sbjct: 235 VDLVWVFIFAFFYL 248
>gi|254525574|ref|ZP_05137626.1| cytochrome c oxidase subunit 3 [Prochlorococcus marinus str. MIT
9202]
gi|221536998|gb|EEE39451.1| cytochrome c oxidase subunit 3 [Prochlorococcus marinus str. MIT
9202]
Length = 200
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E H D G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNNSEVNETHEDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS----WLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ S WL TAF G+IF+I +++E+ +L
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKSLLKDKNSDSQKWLFFTAFLGIIFLICQLFEYFNL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q G L S N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIIAWQSRINGGRLNSQNIFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|319440225|ref|ZP_07989381.1| cytochrome c oxidase subunit III [Corynebacterium variabile DSM
44702]
Length = 203
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV+ A G ++ + P ++V GI T++L+ SS + + + A A + +
Sbjct: 43 LFAMYFVSKANSGGDWPSHPTELNVPFALGI---TVILVSSSFTAQWGVFA-AERGDVFG 98
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W +T G IF+I + YE+ HL+ S + S FF G HG HV G++
Sbjct: 99 LRKWYALTIVLGAIFLIGQAYEYIHLVEHGTTISSSVYGSVFFITTGFHGAHVLAGVLAF 158
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
V++++ K + +S +WHF+D++WI ++ +Y +
Sbjct: 159 VVVLLRTAKSKFTPAQATAAVVVSYYWHFVDVVWIGLWITIYFI 202
>gi|197121267|ref|YP_002133218.1| cytochrome C oxidase subunit III [Anaeromyxobacter sp. K]
gi|220915971|ref|YP_002491275.1| cytochrome c oxidase subunit III [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171116|gb|ACG72089.1| cytochrome c oxidase subunit III [Anaeromyxobacter sp. K]
gi|219953825|gb|ACL64209.1| cytochrome c oxidase subunit III [Anaeromyxobacter dehalogenans
2CP-1]
Length = 209
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY--AAGPAPIDVFDISGIFVS 77
+K+S + LG W++L S+ L+F F YAV Y A A + G+ V+
Sbjct: 14 EKQSHAER----LGMWLFLASEVLLFTALFAAYAVYRYLYSDAFAEASRAIETWLGL-VN 68
Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
TI+L+ SS + + L A K KT W V+ F + F+ ++ E++H +P
Sbjct: 69 TIILVTSSFTVALG-LNEAVKGNGKKTGLWFAVSVAFAVAFLALKAVEYSHHFHEGQLPG 127
Query: 138 R------------SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185
R S F + +F + GLHG+HV G+ L V+ ++ + + +
Sbjct: 128 RYYSFQELQAPGASLFFALYFLITGLHGVHVIVGMTILAVVGVKAARGKYTAAYHTPVEL 187
Query: 186 LSMFWHFLDLIWICVFSFVYLM 207
++WH +DLIWI VF +YL+
Sbjct: 188 AGLYWHLVDLIWIFVFPLIYLV 209
>gi|328951468|ref|YP_004368803.1| cytochrome c oxidase subunit III [Marinithermus hydrothermalis DSM
14884]
gi|328451792|gb|AEB12693.1| cytochrome c oxidase subunit III [Marinithermus hydrothermalis DSM
14884]
Length = 222
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVF-------DISGIFVSTIVLLLSSL 86
W++L+SD +F F YA P P +VF ++ + ++ + +L S
Sbjct: 36 WLFLLSDTFIFGAFLSGYAAARVAATQAWPDPSEVFALRVGQTEVPLLLIAIMTFVLISS 95
Query: 87 SCSFAM-LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI--------SMEAVPQ 137
S + A+ +A ++ +T +L++TA G+ F+ M+ +E+ LI + PQ
Sbjct: 96 SGTMAIGVAYGYRQDRTRTALFLVLTALLGLTFVSMQAFEWTKLILEGFRPWGNPVGAPQ 155
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197
F SSFF L G HGLHV G+I+L + +++LK + ++WHF+DL+W
Sbjct: 156 ---FGSSFFMLTGFHGLHVTAGVIYLSAVAVRVLKGVYDRHGYAGVEIAGLYWHFVDLVW 212
Query: 198 ICVFSFVYL 206
+ +F+F YL
Sbjct: 213 VFIFAFFYL 221
>gi|326382517|ref|ZP_08204208.1| cytochrome-c oxidase [Gordonia neofelifaecis NRRL B-59395]
gi|326198636|gb|EGD55819.1| cytochrome-c oxidase [Gordonia neofelifaecis NRRL B-59395]
Length = 203
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIF 75
+ + S + +G ++L S+ + FA F Y V N + G P P ++
Sbjct: 12 ITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAMYFVARANSSDGWPQPPTHLNLWLAV 71
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
T +L+LSS +C + A A + ++ W +T G IF+I + E+ L+
Sbjct: 72 PVTTILILSSFTCQAGVFA-AERGDVYGLRRWYTLTLVMGTIFVIGQATEYYSLVQEGTT 130
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
SA+ S F+ G HG+HV GL+ L+++ I +S +WHF+D+
Sbjct: 131 LSSSAYGSVFYMATGFHGMHVIGGLLAFVFLLVRTRLSKFTPAQATAAIVVSYYWHFVDV 190
Query: 196 IWICVFSFVYLM 207
+WI +F +Y +
Sbjct: 191 VWIALFVVIYFI 202
>gi|308205480|gb|ADO18975.1| cytochrome c oxidase subunit III [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 188
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
G +L S+ LMF FF TY A P ++ ++TI+L+ SS F
Sbjct: 14 GLLTFLASESLMFGGFFATYLFFRGTTAVWPPEGSEVELLVPTINTIILVSSSFVIHFGD 73
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152
A K + W +TA G IF+ ++YE++ ++ + F + F+ + G H
Sbjct: 74 TA-IKKNNVKGMQLWYAITAIMGAIFLGGQVYEYS---TLGYGLTTNVFANCFYIMTGFH 129
Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIWICVFSFVYLM 207
GLHVF GL+ + + + G S N I ++ ++WHF+D+IWI +F+ VY++
Sbjct: 130 GLHVFVGLLLILRALWRSRLPGEYSANNHTFIEMTEIYWHFVDIIWIVLFTLVYVL 185
>gi|41408030|ref|NP_960866.1| CtaE [Mycobacterium avium subsp. paratuberculosis K-10]
gi|62899981|sp|Q73YM3|COX3_MYCPA RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|41396385|gb|AAS04249.1| CtaE [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 203
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F A G + P ++++ + T+VL+ SS +C + A A + +
Sbjct: 43 LFAMYFTARAQSGGKWPPPPTELNLYQAVPV---TLVLIASSFTCQMGVFA-AERGDVFG 98
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++T G+ F++ + YE+ HL+ SA+ S F+ G H LHV GL+
Sbjct: 99 LRRWYVITFLMGLFFVLGQGYEYYHLMGHGTTIPGSAYGSVFYLATGFHDLHVTGGLVAF 158
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
L+ + I +S +WHF+D++WI +F+ +Y +
Sbjct: 159 IFLLARTAMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI 202
>gi|157412859|ref|YP_001483725.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9215]
gi|157387434|gb|ABV50139.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus str. MIT
9215]
Length = 200
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 18 KDKKESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP---IDVFDISG 73
K+ E H D G +L++D + FA FF Y A P P I ++
Sbjct: 12 KNNSEINETHEDFRMFGLITFLIADGMTFAGFFAAYLTYK---AVNPLPDGAIYELELPI 68
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVS----WLLVTAFFGMIFIIMEIYEFAHL 129
++TI+LL+SS A A K L+ S WL TAF G+IF+I +++E+ +L
Sbjct: 69 PTLNTILLLVSS-----ATFHKAGKALLKDKNSDSQKWLFFTAFLGIIFLICQLFEYFNL 123
Query: 130 ISMEAVP---QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLI 184
P + F S+F+AL G HGLHV G + + ++ Q G L S N L
Sbjct: 124 ------PFGLTDNLFASTFYALTGFHGLHVTLGTLMILIIAWQSRINGGRLNSQNIFPLE 177
Query: 185 CLSMFWHFLDLIWICVFSFVYLM 207
+ ++WHF+D IW+ +F +YL+
Sbjct: 178 AVELYWHFVDGIWVILFIILYLL 200
>gi|27378893|ref|NP_770422.1| cytochrome C oxidase [Bradyrhizobium japonicum USDA 110]
gi|39513|emb|CAA48550.1| cytochrome-c oxidase [Bradyrhizobium japonicum]
gi|27352042|dbj|BAC49047.1| cytochrome C oxidase [Bradyrhizobium japonicum USDA 110]
Length = 240
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 26/197 (13%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLG-KNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSL 86
WI+L+SD +F+ F ++Y P P +VF +I G I ++ + +L S
Sbjct: 44 WIFLLSDTFIFSCFLLSYMTARMSTTVPWPNPSEVFALNIGGKHIPLILIAIMTFILISS 103
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQRSA 140
S + AM + +R +T +L TA FG F+ M+ +E+ LI ME V P +A
Sbjct: 104 SGTMAMAVNFGYRRDRVRTAILMLATAAFGATFVSMQAFEWTKLI-MEGVRPWGNPWGAA 162
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLIS---GNQRRLICLSMF 189
F SSFF + G HG HV G+I+L + ++ + +G + G + ++
Sbjct: 163 QFGSSFFMITGFHGTHVTIGVIFLIAIARKVWRGDFDVERRGFFTSRKGYYEIVEITGLY 222
Query: 190 WHFLDLIWICVFSFVYL 206
WHF+DL+W+ +F+F YL
Sbjct: 223 WHFVDLVWVFIFAFFYL 239
>gi|163751404|ref|ZP_02158629.1| probable cytochrome-C oxidase subunit III oxidoreductase protein
[Shewanella benthica KT99]
gi|161328707|gb|EDP99855.1| probable cytochrome-C oxidase subunit III oxidoreductase protein
[Shewanella benthica KT99]
Length = 230
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 17/188 (9%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSL 86
W++L+SD +F+VF + Y V + + P +VF I+G + ++ + +L +
Sbjct: 43 WLFLLSDTFVFSVFLIGYMNVRMSSMDSWPLTSEVFALTIAGYHIPLVLIAIMTFILITS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV-----PQRSA 140
S + AM + A + KTV ++ TA G F+ M+ +E+A LI E V P SA
Sbjct: 103 SGTMAMAVNFAYRGDSRKTVLFMTATALLGASFLGMQAFEWAKLIIEEGVRPWGNPMGSA 162
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIWI 198
F ++FF + G HGLHV G+I+L V+ ++ G G ++ ++ ++WHF+DL+W+
Sbjct: 163 QFGATFFMITGFHGLHVTAGVIFLLVIARRV-ASGHYEGKGYHIVEITGLYWHFVDLVWV 221
Query: 199 CVFSFVYL 206
+F+ YL
Sbjct: 222 FIFALFYL 229
>gi|50954674|ref|YP_061962.1| cytochrome C oxidase subunit III [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951156|gb|AAT88857.1| cytochrome C oxidase subunit III [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 211
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAGP---APIDVFDISGIFVSTIVLLLSSLSCSFAM 92
++L S+ + FA F Y L +GP A +I +T +L+LSS++C F +
Sbjct: 27 VWLGSEVMFFAGLFAIYFTLKST--SGPLWAAETAHLNIPYAAANTTILVLSSVTCQFGV 84
Query: 93 LASATKRLIHKT-----------VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
A A + H+T V W +++ G +F+ +I E+A L+S +A+
Sbjct: 85 FA-AERLQAHRTGGVLQFWKWGMVEWFVLSYILGAVFVSGQILEYATLVSEGTSLSSNAY 143
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVI--QILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
S+F+ G HGLHV GLI F+LV+ K I +S +WHF+D++W+
Sbjct: 144 GSAFYLTTGFHGLHVTGGLI-AFLLVVGRAYAVKSFGHKEATSAIVVSYYWHFVDVVWLG 202
Query: 200 VFSFVYLM 207
+F+ +Y++
Sbjct: 203 LFAVIYII 210
>gi|120404528|ref|YP_954357.1| cytochrome c oxidase subunit III [Mycobacterium vanbaalenii PYR-1]
gi|119957346|gb|ABM14351.1| cytochrome c oxidase, subunit III [Mycobacterium vanbaalenii PYR-1]
Length = 220
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG---PAPIDVFDISGIFVSTIVLLLSSLSC 88
+G ++L S+ + FA F Y + A G P P ++ +++ T+VL+ SS +C
Sbjct: 44 VGTIVWLSSELMFFAGLFAMY-FTARAQAHGDWPPEPTEL-NLALAVPVTLVLIASSFTC 101
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148
+ A A + + W +T G F++ + YE+ HL+ SA+ + F+
Sbjct: 102 QMGVFA-AERGDVFGLRRWYTLTLAMGTFFVLGQGYEYIHLVEEGTTIPGSAYGTVFYLA 160
Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GLI +L+I+ I +S +WHF+D++WI +F+ +Y
Sbjct: 161 TGFHGLHVIGGLIAFVLLLIRTKMSKFTPAQATAAIVVSYYWHFVDIVWIALFAVIY 217
>gi|313902141|ref|ZP_07835551.1| cytochrome c oxidase subunit III [Thermaerobacter subterraneus DSM
13965]
gi|313467604|gb|EFR63108.1| cytochrome c oxidase subunit III [Thermaerobacter subterraneus DSM
13965]
Length = 214
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV--LLLSSLSCS 89
LG W++L SD L+FA Y V AG P G+++ T++ +L+SS S
Sbjct: 37 LGMWVFLASDVLVFATLLTAYGV--ARLKAGTWPDRTHIFEGLWLVTLMTFILISSSSTM 94
Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA--------VPQRSAF 141
A + +A + V +LL+T G+ F+ + +E+ LI A VPQ SA
Sbjct: 95 AAAVGAARRGDQKAAVRFLLLTILGGLFFLGSQAFEWTSLIREGARLFTNPWGVPQFSA- 153
Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201
SFF + G HG HV GLI+L V+ + + +G SG + L +WHF+DL+W+ +F
Sbjct: 154 --SFFVITGFHGFHVLTGLIYLAVVTLNAM-RGRYSGLGVEVAGL--YWHFVDLVWVFIF 208
Query: 202 SFVYLM 207
+ YL+
Sbjct: 209 TLFYLI 214
>gi|296393481|ref|YP_003658365.1| cytochrome-c oxidase [Segniliparus rotundus DSM 44985]
gi|296180628|gb|ADG97534.1| Cytochrome-c oxidase [Segniliparus rotundus DSM 44985]
Length = 209
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 44 MFAVFFVTYAVLG------KNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASAT 97
+FA++FVT A KN+ P +++F + T VL+LSS +C + + A A
Sbjct: 43 LFAMYFVTRAGQAPALDGHKNWPPEPTHLNLFLAIPV---TTVLVLSSFTCQWGVFA-AE 98
Query: 98 KRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVF 157
+ + W +T G F++ + +E+ +L + SA+ S FF G HGLHV
Sbjct: 99 RGDVFGLRRWYTITLLMGTFFVMGQGFEYTNLYAEGTRLDSSAYGSVFFITTGFHGLHVI 158
Query: 158 FGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
GL+ +L+++ I +S +WHF+D++WI +F+ +Y
Sbjct: 159 GGLVAFVLLLVRTKMSKFTPAQATSAIVVSYYWHFVDVVWIALFATIY 206
>gi|170742043|ref|YP_001770698.1| cytochrome c oxidase subunit III [Methylobacterium sp. 4-46]
gi|168196317|gb|ACA18264.1| cytochrome c oxidase subunit III [Methylobacterium sp. 4-46]
Length = 240
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVFDIS-G------IFVSTIVLLLSSL 86
WI+L+SD +F F V Y V P P +VF + G + ++ + +L S
Sbjct: 44 WIFLLSDTFVFGCFLVGYMTVRMSTMVPWPNPSEVFSLEIGHAKLPLLLIAIMTFVLISS 103
Query: 87 SCSFAMLASATKRLIHKTVSWLL-VTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + R +T + L+ VTA G F+ M+ +E+ LI P +
Sbjct: 104 SGTMAMAVAYGYRRDRRTTALLMGVTALLGATFVGMQAFEWTKLIREGVRPWSNPWGAHQ 163
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ----------RRLICLSMFW 190
F S+FF + G HG HV G+I L ++ ++ + +G + + + ++W
Sbjct: 164 FGSTFFMITGFHGTHVTIGVIVLLIIARKVWRGDFDTGRRGFFTSQRGRYENVEIVGLYW 223
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+ YL
Sbjct: 224 HFVDLVWVFIFALFYL 239
>gi|152967194|ref|YP_001362978.1| cytochrome C oxidase subunit III [Kineococcus radiotolerans
SRS30216]
gi|151361711|gb|ABS04714.1| cytochrome c oxidase subunit III [Kineococcus radiotolerans
SRS30216]
Length = 219
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 20/192 (10%)
Query: 32 LGFWIYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87
+G ++L S+ + +FA++F +V + +GPA ++V S ++T +L++SS
Sbjct: 31 VGVIVWLSSELMFFAGLFAMYFTIRSVAPALWESGPALLNVPFSS---INTTILVISSFW 87
Query: 88 CSFAMLASA---TKRL--IHKT-----VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137
C F + A+ +RL +H+ W ++T FG +F+ +++E+A L
Sbjct: 88 CQFGVFAAERFQPRRLGKLHEVGKWGMEEWFILTYIFGALFVAGQVFEYAELAHEGLTIA 147
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR--RLICLSMFWHFLDL 195
+A+ S F G HG+HVF GL+ F+LVI G+Q I +S +WHF+D+
Sbjct: 148 TNAYGSVFILATGFHGIHVFGGLV-AFLLVIGRSYASKRFGHQEATSAIVVSYYWHFVDV 206
Query: 196 IWICVFSFVYLM 207
+WI +F+ +Y++
Sbjct: 207 VWIGLFTVIYIL 218
>gi|86358221|ref|YP_470113.1| cytochrome-c oxidase subunit III protein [Rhizobium etli CFN 42]
gi|86282323|gb|ABC91386.1| cytochrome-c oxidase subunit III protein [Rhizobium etli CFN 42]
Length = 239
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 24/196 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYA-AGPAPIDVF-------DISGIFVSTIVLLLSSL 86
WI+L+SD +F F + Y + A P P +VF DI I ++ + +L S
Sbjct: 43 WIFLLSDTFVFGCFLIAYMTARMSTPVAWPNPSEVFALHIGGQDIPLILIAIMTFVLISS 102
Query: 87 SCSFAMLAS-ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA----- 140
S + AM + +R H+T + +L+TA G F+ M+ +E+ LI+ P +
Sbjct: 103 SGTMAMAVNFGYRRERHRTAALMLLTALLGATFVSMQAFEWTKLITEGVRPWENPWGAAQ 162
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-------KGLISGNQRR---LICLSMFW 190
F S+FF + G HG HV G+I+L ++ ++ + +G + + R + + ++W
Sbjct: 163 FGSTFFMITGFHGTHVTIGVIFLLIVARKVWRGDFDVERRGFFTSRKGRYEVVEIMGLYW 222
Query: 191 HFLDLIWICVFSFVYL 206
HF+DL+W+ +F+F YL
Sbjct: 223 HFVDLVWVFIFAFFYL 238
>gi|296140388|ref|YP_003647631.1| cytochrome-c oxidase [Tsukamurella paurometabola DSM 20162]
gi|296028522|gb|ADG79292.1| Cytochrome-c oxidase [Tsukamurella paurometabola DSM 20162]
Length = 181
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDV-FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
+FA++FV A G+N G P D + TIVL+LSS++C + A A + +
Sbjct: 20 LFAMYFVARAGAGEN---GWPPADTNVSLWAALPPTIVLILSSVTCQLGVFA-AERGDVF 75
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
K W V+ G FI+ ++ E+ LIS S + S F+ G HGLHV GL+
Sbjct: 76 KFRIWYFVSFLMGFAFILGQLNEYKTLISEGLTLSSSVYGSVFYMATGFHGLHVMGGLVA 135
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
++ + I +S +WHF+D++WI +F+ +Y++
Sbjct: 136 FIFILARSRASKFTPAQATSAIVVSYYWHFVDVVWIGLFAVIYII 180
>gi|29832594|ref|NP_827228.1| cytochrome c oxidase subunit III [Streptomyces avermitilis MA-4680]
gi|62900004|sp|Q82AK5|COX3_STRAW RecName: Full=Probable cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III
gi|29609714|dbj|BAC73763.1| putative cytochrome c oxidase subunit III (complex IV)
[Streptomyces avermitilis MA-4680]
Length = 206
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTY----AVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85
T +G I+L S+ + FA F Y +V G + A F S +T +L+LSS
Sbjct: 25 TSVGTIIWLSSELMFFAALFAMYFTLRSVTGPEHWKEMASHLNFPFSA--TNTTILVLSS 82
Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSS 144
L+C + A A + + K W +VT G IFI +++E+ L+ + + S + S
Sbjct: 83 LTCQLGVFA-AERGDVKKLRMWFIVTFIMGAIFIGGQVFEYTELVKKDGLSLSSDPYGSV 141
Query: 145 FFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +L VL + I +S +WHF+D++WI +F+
Sbjct: 142 FYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFAT 201
Query: 204 VYLM 207
+Y++
Sbjct: 202 IYMI 205
>gi|238060321|ref|ZP_04605030.1| cytochrome c oxidase subunit III [Micromonospora sp. ATCC 39149]
gi|237882132|gb|EEP70960.1| cytochrome c oxidase subunit III [Micromonospora sp. ATCC 39149]
Length = 199
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 8/192 (4%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP----IDVFDISG 73
K + S + +G ++L S+ + FA F Y + AA P + ++
Sbjct: 9 KSRIHSLTRPNMVSVGTIVWLSSELMFFAALFAMYFSI---RAAAPEQWAKHTEHLNVPY 65
Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133
T++L+LSS++C + A A K +H W +T G+IF++ ++ E+ L+
Sbjct: 66 ATTFTVILVLSSVTCQLGVFA-AEKGDVHALRRWFTITFVMGLIFVLGQVNEYVTLVHEG 124
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193
+ S F+ G HGLHV GL+ + +++ I +S +WHF+
Sbjct: 125 VKINADGYGSMFYLTTGFHGLHVTGGLVAFIIFMVRTTMGRFTPAQATSAIVVSYYWHFV 184
Query: 194 DLIWICVFSFVY 205
D++WI +++ +Y
Sbjct: 185 DVVWIGLYAMIY 196
>gi|319950678|ref|ZP_08024579.1| cytochrome c oxidase [Dietzia cinnamea P4]
gi|319435661|gb|EFV90880.1| cytochrome c oxidase [Dietzia cinnamea P4]
Length = 203
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDV-FDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
+FA++FV+ A G ++ + P ++V F ++ T++L+ SS +C + A A + +
Sbjct: 43 LFAMYFVSKANSGGDWPSYPTHLNVPFALT----ITVILVASSFTCQLGVFA-AEQGDVF 97
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
W +++A G +F+I + YE+ L S + S FF G HGLHV G+I
Sbjct: 98 GLRRWYVISAVMGTVFLIGQAYEYVMLYLEGTTISSSVYGSVFFITTGFHGLHVAAGVIA 157
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
VLV++ I +S +WHF+D++WI +F +Y +
Sbjct: 158 FVVLVMRTTMSRFTPAQATAAIVVSYYWHFVDVVWIGLFVTIYFI 202
>gi|169629853|ref|YP_001703502.1| cytochrome c oxidase subunit III [Mycobacterium abscessus ATCC
19977]
gi|169241820|emb|CAM62848.1| Cytochrome c oxidase subunit III [Mycobacterium abscessus]
Length = 180
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS---GIFVSTIVLLLSSLSCSFA 91
WI++M D +F VFF AV G +YA PA ++ S I ++ + L+SS +
Sbjct: 8 WIFIMGDLTVFGVFF---AVWGWSYARNPAMFELGRASMSQSIGLTETLTLISSSAAVVT 64
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
L A + + +W L FG +F++++ +E+ ++ P F +F G+
Sbjct: 65 ALTRARWKQWSRACAWYLTAIGFGAVFVVLKAFEYGRHLTTGLDPLAGEFFMYYFVFTGI 124
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
H LHV GL+ L + + L + ++WH +D++W+ +FS +YL+
Sbjct: 125 HLLHVLIGLLGLGAAARSMRPRATRRYGVALLEGIGVYWHMVDVLWVVLFSLIYLI 180
>gi|116073482|ref|ZP_01470744.1| possible cytochrome c oxidase subunit III [Synechococcus sp.
RS9916]
gi|116068787|gb|EAU74539.1| possible cytochrome c oxidase subunit III [Synechococcus sp.
RS9916]
Length = 199
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 15/194 (7%)
Query: 21 KESCVDH-DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79
++ DH D G +L++D + FA FF Y P + ++ ++T+
Sbjct: 14 TDTAHDHEDHRMFGVATFLVADAMTFAGFFAAYLTFHAVNPLEPGAVYELELPLPILNTV 73
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVS----WLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
+LL+SS A A ++L + S WLL+TA G+ F+ ++ E+ ++
Sbjct: 74 LLLVSS-----ATFHKAGQKLRQRDNSGCRQWLLITAALGLAFLASQMVEY---FTLPFG 125
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQ--ILKKGLISGNQRRLICLSMFWHFL 193
+ F S+F+AL G HGLHV G + + ++ Q I + + NQ L + ++WHF+
Sbjct: 126 LTDNLFASTFYALTGFHGLHVTLGALMILIVWWQCRIPSGRITADNQFPLEAVELYWHFV 185
Query: 194 DLIWICVFSFVYLM 207
D IW+ +F +YL+
Sbjct: 186 DGIWVVLFLILYLL 199
>gi|119476744|ref|ZP_01617054.1| probable cytochrome-C oxidase subunit III oxidoreductase protein
[marine gamma proteobacterium HTCC2143]
gi|119450000|gb|EAW31236.1| probable cytochrome-C oxidase subunit III oxidoreductase protein
[marine gamma proteobacterium HTCC2143]
Length = 224
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 20/189 (10%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP--IDVF--DISG-------IFVSTIVLLL 83
WI+L+SD +F++F Y + + A P P +VF I+G I + T VL+
Sbjct: 38 WIFLLSDTFIFSIFLTGYMNV-RMSATEPWPNTSEVFALTIAGQHIPLILIAIMTFVLIT 96
Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-----QR 138
SS + + A + A + KT ++ TA G F+ M+ +E++ LI P
Sbjct: 97 SSGTMALA-VNYAYQGDRKKTFLLMIATALLGASFVGMQAFEWSKLIHEGVRPWGNPMGA 155
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIW 197
+ F S+FF + G HG+HV G+I+L ++ ++ +KG G ++ ++ ++WHF+DL+W
Sbjct: 156 TQFGSAFFMITGFHGIHVSAGVIYLSIIANRV-RKGHYEGKGYHIVEITGLYWHFVDLVW 214
Query: 198 ICVFSFVYL 206
+ +F+F YL
Sbjct: 215 VFIFAFFYL 223
>gi|296117509|ref|ZP_06836093.1| cytochrome c oxidase, subunit III [Corynebacterium ammoniagenes DSM
20306]
gi|295969240|gb|EFG82481.1| cytochrome c oxidase, subunit III [Corynebacterium ammoniagenes DSM
20306]
Length = 194
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 44 MFAVFFVTYAV-LGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIH 102
+FA++F + A G ++A A ++V G ++TI L+LSS++ + SA + ++
Sbjct: 33 LFAMWFTSRANGQGGDWAEQTAQLNV--PMGFLITTI-LILSSVTSQLGVF-SAERGDVY 88
Query: 103 KTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIW 162
K W VT G+IFI + YE+ +I Q S F S F+ L G H +HV G++
Sbjct: 89 KLRVWYAVTIMLGLIFICIVGYEWYEMIHHGVTIQSSVFGSVFYILTGFHAIHVSAGIVA 148
Query: 163 LFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
V++++ K + +S +WHF+D+IWI VF +YL+
Sbjct: 149 FIVIMMRTAKSKFTPAQATAAMAVSYYWHFVDVIWIGVFVVIYLV 193
>gi|224826584|ref|ZP_03699685.1| cytochrome c oxidase subunit III [Lutiella nitroferrum 2002]
gi|224601185|gb|EEG07367.1| cytochrome c oxidase subunit III [Lutiella nitroferrum 2002]
Length = 231
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGF---------WIYLMSDCLMFAVFFVTY-A 53
Q+ P L + VD G F W++L+SD +F F Y
Sbjct: 3 QRKSSPPEPPLTSAAGWQGVVVDWSGDREAFKVPWGKAMMWVFLLSDTFIFGGFLTGYMT 62
Query: 54 VLGKNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSLSCSFAMLAS-ATKRLIHKTV 105
V P P +VF I G I ++ + +L S S + AM + A +R K
Sbjct: 63 VRISTTVPWPNPSEVFALTIGGTAVPLILIAIMTFILISSSGTMAMAVNFAYRRERVKCA 122
Query: 106 SWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS------AFLSSFFALVGLHGLHVFFG 159
+ +L TA G F+ ++ +E+ HLI E V S F S+FF + G HGLHV G
Sbjct: 123 ALMLATAALGACFVGLQAFEWTHLIVEEGVRPWSNPLGAPQFGSTFFMITGFHGLHVSAG 182
Query: 160 LIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206
+I+L + +++L + SGN + + ++WHF+DL+W+ +F+F YL
Sbjct: 183 VIYLATVALKVLGGRYEKSGNYQIVEIAGLYWHFVDLVWVFIFAFFYL 230
>gi|317506584|ref|ZP_07964376.1| cytochrome c oxidase subunit 3 protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255093|gb|EFV14371.1| cytochrome c oxidase subunit 3 protein [Segniliparus rugosus ATCC
BAA-974]
Length = 209
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAG--------PAPIDVFDISGIFVSTIVLLLSSLS 87
++L S+ + FA F Y V A P P ++ I V+T VL+LSS +
Sbjct: 31 VWLSSELMFFAGLFAMYFVTRAGQAPALDGHKNWPPEPTELNLALAIPVTT-VLILSSFT 89
Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147
C + + A A + + W +T F G+ F+ + YE+ +L SA+ S FF
Sbjct: 90 CQWGVFA-AERGDVFGLRRWYTLTLFMGLFFVCGQGYEYFNLYREGTRLDSSAYGSVFFI 148
Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
G HGLHV GL+ +L+ + I +S +WHF+D++WI +F+ +Y
Sbjct: 149 TTGFHGLHVIGGLVAFVLLLARTKMSKFTPAQATSAIVVSYYWHFVDVVWIALFATIY 206
>gi|149909241|ref|ZP_01897898.1| putative cytochrome c oxidase subunit III [Moritella sp. PE36]
gi|149807765|gb|EDM67711.1| putative cytochrome c oxidase subunit III [Moritella sp. PE36]
Length = 225
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Query: 35 WIYLMSDCLMFAVFFVTY-AVLGKNYAAGPAPIDVF--DISG-----IFVSTIVLLLSSL 86
W +L+SD +F +F Y +V A P DVF I+G + ++ + +L +
Sbjct: 38 WAFLLSDTFIFGIFLTAYMSVRMSAVDAWPNSSDVFALTIAGEHVPLVLIAIMTFILITS 97
Query: 87 SCSFAMLASATKRLIHKTVSWLL-VTAFFGMIFIIMEIYEFAHLISMEAVPQRS------ 139
S + A+ + + + S L+ +TA FG+ F+ M+ +E++ LI E V S
Sbjct: 98 SGTMALAVNFAYQGEKRKASLLIFITALFGISFVGMQAFEWSKLIFEEGVRPWSNPLGAA 157
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
F ++FF + G HGLHV G+I+L V+ ++ + ++WHF+DL+W+
Sbjct: 158 QFGATFFMITGFHGLHVSVGVIYLLVVAKRVHAGDYDKKGYHMVEIAGLYWHFVDLVWVF 217
Query: 200 VFSFVYL 206
+F+F YL
Sbjct: 218 IFAFFYL 224
>gi|75910498|ref|YP_324794.1| cytochrome c oxidase subunit III [Anabaena variabilis ATCC 29413]
gi|75704223|gb|ABA23899.1| cytochrome c oxidase subunit III [Anabaena variabilis ATCC 29413]
Length = 204
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 22 ESCVDHDGTYL-GFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFVSTI 79
E D +G + GF ++L+S+ ++F FF Y V P ++ ++ ++T+
Sbjct: 20 EHSHDEEGNKMFGFIVFLLSESVIFLSFFAGYIVYKTTTPNWLPVGVEGLEVKDPAINTV 79
Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
VL+ SS FA LA K L + +L T G F++ + E++HL E
Sbjct: 80 VLVASSFVIYFAELALKRKNLRLFRI-FLSATMAMGSYFLVGQAIEWSHL---EFGFTSG 135
Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
+ F+ L G HGLHVF G++ F+++++ L G + S+FWHF+D+IWI
Sbjct: 136 VYGGMFYLLTGFHGLHVFTGILLQFIILVRSLIPGNYDTGHFGVNATSLFWHFVDVIWII 195
Query: 200 VFSFVYL 206
+F +Y+
Sbjct: 196 LFILIYI 202
>gi|167622196|ref|YP_001672490.1| cytochrome c oxidase subunit III [Shewanella halifaxensis HAW-EB4]
gi|167352218|gb|ABZ74831.1| cytochrome c oxidase subunit III [Shewanella halifaxensis HAW-EB4]
Length = 293
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136
+T++LL SS++ FA L + TV WL +T G+ F+ +++ E+ H +
Sbjct: 163 NTLILLTSSITLHFAHLGLEKNKRSALTV-WLAITILLGVAFLYLQVEEYLHAYQEMGLT 221
Query: 137 QRSA-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195
S + ++FF L G HG+HV G ++L VL ++LK S +WHF+D+
Sbjct: 222 LNSGIYGNTFFLLTGFHGMHVTLGTVFLIVLFFRVLKGHFTPDKHFAFQAGSWYWHFVDV 281
Query: 196 IWICVFSFVYLM 207
+W+C+F FVY++
Sbjct: 282 VWLCLFIFVYVL 293
>gi|148273015|ref|YP_001222576.1| putative cytochrome c oxidase subunit III [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830945|emb|CAN01889.1| putative cytochrome c oxidase subunit III [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 209
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAA-GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLA 94
++L S+ + FA F Y L A ++ V+T++L+ SS +C F + A
Sbjct: 27 VWLGSEVMFFAGLFAIYFTLRSTSGALWEFEAGRLNVPFSLVNTLILVSSSFTCQFGVFA 86
Query: 95 SATKRLIHK----------TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
+ +RL + TV W +T G IF++ +I+E+A L++ +A+ S+
Sbjct: 87 A--ERLQARATGWKPSQWGTVEWFFLTYALGAIFVVGQIFEYATLVTEGITLSSNAYGSA 144
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +++ +I + + I +S +WHF+D++WI +F
Sbjct: 145 FYMTTGFHGLHVTGGLIAFLLVIGRIFAVRSMGHREATSAIVVSYYWHFVDVVWIGLFLV 204
Query: 204 VYLM 207
+Y++
Sbjct: 205 IYVL 208
>gi|300934171|ref|ZP_07149427.1| cytochrome c oxidase subunit III [Corynebacterium resistens DSM
45100]
Length = 194
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++FV+ A G ++ + P ++V + I TI+L+ SS + + + A A + +
Sbjct: 34 LFAMYFVSKANSGGDWPSHPTELNVPFAATI---TIILVSSSFTAQWGVFA-AERGDVFA 89
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWL 163
W ++A G +F+I + YE+ HL+ S + S FF G HG HV G++
Sbjct: 90 LRRWYALSALLGTVFLIGQGYEYFHLVQHGTTIPGSVYGSVFFITTGFHGAHVLAGVLAF 149
Query: 164 FVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
V++++ K + +S +WHF+D++WI ++ +Y +
Sbjct: 150 VVVLLRTFKSKFTPAQATAAVVVSYYWHFVDVVWIGLWITIYFI 193
>gi|159901868|gb|ABX10602.1| cytochrome c oxidase subunit I [uncultured planctomycete 6N14]
Length = 754
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 18 KDKKESCVDH----DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73
K+++ D D W ++ S+ + F + V Y V N V D++
Sbjct: 559 SQKEQTPADSGWRPDKAITSVWAFVASEAVFFLLLLVAYVVFNTNLVGEITSASVLDVTR 618
Query: 74 IFVSTIVLLLSSLSC--SFAMLAS---ATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128
++ LL SS + + A L S A RL WL +T G IFI + E+
Sbjct: 619 TAFFSVALLGSSFTLWKAEAFLKSGKFAQFRL------WLALTITLGAIFIGGQAIEYYG 672
Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188
LIS + + F ++FF + G HGLHV GLI L ++ + +K+ + L + +
Sbjct: 673 LISSDVTISDNLFTATFFTVTGFHGLHVIVGLIALSIVFVLAVKQDRNVLHGSALKAIGI 732
Query: 189 FWHFLDLIWICVFSFVYL 206
+WHF+D++WI VF +YL
Sbjct: 733 YWHFVDVVWIAVFCIIYL 750
>gi|22299552|ref|NP_682799.1| cytochrome c oxidase subunit III [Thermosynechococcus elongatus
BP-1]
gi|22295735|dbj|BAC09561.1| cytochrome c oxidase subunit III [Thermosynechococcus elongatus
BP-1]
Length = 201
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 24 CVDH-----DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
VDH D LG ++L+S+ LMF F Y +L + P ++ ++T
Sbjct: 13 AVDHAHEHPDFRVLGLLVFLISESLMFGGLFAAYLLLRGMHEQWPPEGTEVELLVPTINT 72
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++L+ SS + +A K + W +TA G +F+ ++YE+ +++ +
Sbjct: 73 LILISSSFVIHYGDVA-IKKDDVRGMRKWYWITAAMGAVFLGGQVYEY---LTLGYGLRT 128
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIW 197
+ F + F+ + G HGLHVF G++ + ++ + + G + + + ++ ++WHF+D+IW
Sbjct: 129 NVFANCFYVMTGFHGLHVFIGILLILGVIWRSRRPGHYNAQKHTGVAMAEIYWHFVDVIW 188
Query: 198 ICVFSFVYLM 207
I +F+ +Y++
Sbjct: 189 IILFTLLYIL 198
>gi|146294867|ref|YP_001185291.1| cytochrome c oxidase subunit III [Shewanella putrefaciens CN-32]
gi|145566557|gb|ABP77492.1| cytochrome c oxidase, subunit III [Shewanella putrefaciens CN-32]
Length = 291
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
++T++LL+SS++ FA + S K V WL +T G+ F+ +++ E+ H +
Sbjct: 160 INTLILLISSVTLHFAHI-SLEKAKRSAVVLWLGITILLGIGFVGLQVEEYRHAYQEMGL 218
Query: 136 PQRSA-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194
S + ++FF L G HG+HV G ++L VL I++LK + S +WHF+D
Sbjct: 219 TLTSGIYGNTFFLLTGFHGMHVTLGTVFLVVLFIRVLKGHFTADKHFAFQAGSWYWHFVD 278
Query: 195 LIWICVFSFVYLM 207
++W+C+F FVY++
Sbjct: 279 VVWLCLFIFVYVL 291
>gi|124025209|ref|YP_001014325.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str.
NATL1A]
gi|123960277|gb|ABM75060.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus str.
NATL1A]
Length = 201
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77
K++ + D G +L++D + FA FF Y GP I ++ ++
Sbjct: 14 KNELSAEEHEDFRLFGLIAFLIADGMTFAGFFAAYLTFKAVNPIGPDAIYELELPLPTLN 73
Query: 78 TIVLLLSSLSCSFA--MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135
TI+LL+SS + A L + K WLL+T G+ F+I +++E+ ++
Sbjct: 74 TILLLISSFTFHRAGKFLEKNESKQCQK---WLLITGVLGVAFLISQMFEY---FTLPFG 127
Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI--CLSMFWHFL 193
+ F S+F+AL G HGLHV G I + ++ Q NQ + + ++WHF+
Sbjct: 128 LTDNLFASTFYALTGFHGLHVTLGSIMIMIIWWQTRVPSGRVNNQNKFPFEAVELYWHFV 187
Query: 194 DLIWICVFSFVYLM 207
D IW+ +F +YL+
Sbjct: 188 DGIWVVLFIILYLL 201
>gi|1706077|sp|P50677|COX3_THEVL RecName: Full=Cytochrome c oxidase subunit 3; AltName:
Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome
c oxidase polypeptide III; AltName: Full=Oxidase aa(3)
subunit 3
gi|457676|dbj|BAA41042.1| cytochrome c oxidase subunit III [Thermosynechococcus vulcanus]
Length = 201
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 24 CVDH-----DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78
VDH D LG ++L+S+ LMF F Y +L + P ++ ++T
Sbjct: 13 AVDHAHEHPDFRVLGLLVFLISESLMFGGLFAAYLLLRGMHEQWPPEGTEVELFVPTINT 72
Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
++L+ SS + +A K + W +TA G +F+ ++YE+ +++ +
Sbjct: 73 LILISSSFVIHYGDVA-IKKDDVRGMRKWYWITAAMGAVFLGGQVYEY---LTLGYGLRT 128
Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS-MFWHFLDLIW 197
+ F + F+ + G HGLHVF G++ + ++ + + G + + + ++ ++WHF+D+IW
Sbjct: 129 NVFANCFYVMTGFHGLHVFIGILLILGVIWRSRRPGHYNAQKHTGVAMAEIYWHFVDVIW 188
Query: 198 ICVFSFVYLM 207
I +F+ +Y++
Sbjct: 189 IILFTLLYIL 198
>gi|269956796|ref|YP_003326585.1| cytochrome c oxidase subunit III [Xylanimonas cellulosilytica DSM
15894]
gi|269305477|gb|ACZ31027.1| cytochrome c oxidase subunit III [Xylanimonas cellulosilytica DSM
15894]
Length = 218
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGK--NYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89
+G ++L S+ + FA F Y + + A + ++ ++ ++T +L+LSS +C
Sbjct: 29 VGTIVWLASELMFFAGLFAMYFTVRSVMDPAEWASQTEMLNVRFALLNTTILVLSSATCQ 88
Query: 90 FAMLASA------TKRLIHKTV----SWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139
+LA+ T RL+ + W +T G FI +++E+A L+ S
Sbjct: 89 MGVLAAERFKPVRTGRLLQVSQWGMHEWTTLTYLMGAFFIGGQVFEYAALVEEGLTISSS 148
Query: 140 AFLSSFFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198
A+ S F+ G HGLHV GLI +LF+L K I S +WHF+D++WI
Sbjct: 149 AYGSVFYLTTGFHGLHVVGGLIAFLFLLGRSFAAKRFGHHEATTAIVTSYYWHFVDVVWI 208
Query: 199 CVFSFVYLM 207
+F+ +YL+
Sbjct: 209 ALFAVIYLL 217
>gi|170781130|ref|YP_001709462.1| cytochrome c oxidase polypeptide III [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155698|emb|CAQ00818.1| probable cytochrome c oxidase polypeptide III [Clavibacter
michiganensis subsp. sepedonicus]
Length = 212
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAA-GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLA 94
++L S+ + FA F Y L A ++ V+T++L+ SS +C F + A
Sbjct: 30 VWLGSEVMFFAGLFAIYFTLRSTSGALWEFEAGRLNVPFSLVNTLILVSSSFTCQFGVFA 89
Query: 95 SATKRLIHK----------TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144
+ +RL + TV W +T G IF++ +I+E+A L++ +A+ S+
Sbjct: 90 A--ERLQARATGWKPSQWGTVEWFFLTYALGAIFVVGQIFEYATLVTEGITLSSNAYGSA 147
Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIWICVFSF 203
F+ G HGLHV GLI +++ +I + + I +S +WHF+D++WI +F
Sbjct: 148 FYMTTGFHGLHVTGGLIAFLLVIGRIFAVRSMGHREATSAIVVSYYWHFVDVVWIGLFLV 207
Query: 204 VYLM 207
+Y++
Sbjct: 208 IYVL 211
>gi|73538265|ref|YP_298632.1| cytochrome c oxidase, subunit III [Ralstonia eutropha JMP134]
gi|72121602|gb|AAZ63788.1| cytochrome c oxidase, subunit III [Ralstonia eutropha JMP134]
Length = 209
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 30 TYLGFWIYLMSDCLMFAVFFVTYA-VLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88
+ LG W++L ++ + F F+ Y V + A P D+ ++T+VL+ SSL
Sbjct: 18 SRLGMWVFLGTELMFFGPLFMGYYFVRATDPVALPLAARQTDLLLGSLNTLVLMTSSLGM 77
Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA-------- 140
+ A+ A+ R V L T+ G++F++++ +E+A I+ VP ++
Sbjct: 78 AMAVSAANEDRR-RAAVRCLWATSALGLVFLLIKGWEYAKDIASGFVPGNASGAGGPTGQ 136
Query: 141 -FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199
F +FA+ GLH +H+ G+ + V + + ++ ++ + RL + ++WHF+D+IW+
Sbjct: 137 MFRLLYFAMTGLHAIHLCIGIGLVVVFALAMRQRRPLAVDPGRLEIVGLYWHFVDIIWLF 196
Query: 200 VFSFVYLMG 208
+F+ +YL G
Sbjct: 197 LFALLYLPG 205
>gi|332670689|ref|YP_004453697.1| cytochrome-c oxidase [Cellulomonas fimi ATCC 484]
gi|332339727|gb|AEE46310.1| Cytochrome-c oxidase [Cellulomonas fimi ATCC 484]
Length = 208
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 36 IYLMSDCL----MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91
++L S+ + +FA++F A + + +A +++ F++T VL+LSS++C
Sbjct: 24 VWLASELMFFAGLFAMYFTLRAAVPEEWAE---QTQKLNLTFAFINTTVLVLSSVTCQMG 80
Query: 92 MLASATKRLIHKTV----------SWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141
+ A+ + + W+++T G FI ++YE+A L+ S +
Sbjct: 81 VWAAERFQPVRTGSLLQVNRWGMNEWMVLTYLMGAFFIGGQVYEYAELVEHGLTISSSPY 140
Query: 142 LSSFFALVGLHGLHVFFGLI-WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200
S F+ G HGLHV GLI +LF+L K I S +WHF+D++WI +
Sbjct: 141 GSVFYLTTGFHGLHVVGGLIAFLFLLGRSFSAKRFGHHEATTAIVTSYYWHFVDVVWIAL 200
Query: 201 FSFVYLM 207
F+ +YL+
Sbjct: 201 FAVIYLL 207
>gi|311696665|gb|ADP99538.1| cytochrome c oxidase subunit III [marine bacterium HP15]
Length = 295
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 5/148 (3%)
Query: 63 PAPIDVFDISGI-FVSTIVLLLSSLSCSFAMLA-SATKRLIHKTVSWLLVTAFFGMIFII 120
P P +V G+ ++TI+L+ SS + + A A A R KT WL +T ++F+
Sbjct: 150 PGPKEVISAWGLPLMNTILLVTSSFTVTVAHHALKAGNRA--KTKLWLALTIALAIVFVF 207
Query: 121 MEIYEFAHLIS-MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179
++ YE+ H ++ Q + S+FF L G HG HV G + L +++I+I K + N
Sbjct: 208 VQGYEYMHAYQDLDLTLQSGIYGSTFFMLTGFHGAHVILGSLMLIIMLIRINKGHFTADN 267
Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLM 207
+ +WHF+D++W+ +F FVY++
Sbjct: 268 HFGFEAAAWYWHFVDVVWLGLFVFVYIL 295
>gi|330469375|ref|YP_004407118.1| cytochrome-c oxidase [Verrucosispora maris AB-18-032]
gi|328812346|gb|AEB46518.1| cytochrome-c oxidase [Verrucosispora maris AB-18-032]
Length = 180
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 36 IYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID----VFDISGIFVSTIVLLLSSLSCSFA 91
++L S+ + FA F Y + AA P + V ++ T++L+LSS++C
Sbjct: 8 VWLSSELMFFAALFAMYFSI---RAAAPEQWEKHTAVLNVPYATTFTLILVLSSITCQIG 64
Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151
+ A A + +H W +T G+IF++ + E+ L+ + S F+ G
Sbjct: 65 VFA-AERGDVHALRRWFTITFVMGLIFVMGQANEYRELVHHGIKINEDGYGSMFYLTTGF 123
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205
HGLHV GLI + +I+ I +S +WHF+D++WI +++ +Y
Sbjct: 124 HGLHVIGGLIAFVIFMIRTTMGRFTPAQATSAIVVSYYWHFVDVVWIGLYAMIY 177
>gi|308049752|ref|YP_003913318.1| cytochrome C oxidase subunit III [Ferrimonas balearica DSM 9799]
gi|307631942|gb|ADN76244.1| cytochrome c oxidase subunit III [Ferrimonas balearica DSM 9799]
Length = 219
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 23/191 (12%)
Query: 35 WIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI--DVF--DISG-------IFVSTIVLLL 83
WI+L+SD +F F V Y + + A P P+ +VF I+G I + T +L+
Sbjct: 32 WIFLLSDTFIFGTFLVGYMTV-RMSAVEPWPVADEVFALTIAGHTIPLVLIAIMTFILIT 90
Query: 84 SSLSCSFAM-LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP-----Q 137
SS + + A+ R + T+ W VTA G F+ M+ +E++ LI P
Sbjct: 91 SSGTMALAVNYGYRRNRKVAATLMW--VTAILGASFVGMQAFEWSKLIEEGVRPWGNPLG 148
Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195
+ F ++F+ + G HGLHV G++ L V+ + +G SG+ + + ++WHF+DL
Sbjct: 149 AAQFGAAFYMITGFHGLHVSIGVL-LLVIYAHKVGRGDYEASGDYGIVETVGLYWHFVDL 207
Query: 196 IWICVFSFVYL 206
+W+ +F+F YL
Sbjct: 208 VWVFIFAFFYL 218
>gi|239940634|ref|ZP_04692571.1| putative cytochrome c oxidase subunit III [Streptomyces roseosporus
NRRL 15998]
gi|239987116|ref|ZP_04707780.1| putative cytochrome c oxidase subunit III [Streptomyces roseosporus
NRRL 11379]
Length = 169
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 44 MFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK 103
+FA++F +V+G +Y + F S +T +L+LSSL+C + A A + + K
Sbjct: 6 LFAMYFTLRSVMGPDYWKEMSDHLNFPFSA--TNTTILVLSSLTCQLGVFA-AERGDVKK 62
Query: 104 TVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS-AFLSSFFALVGLHGLHVFFGLI- 161
+W ++T G IFI ++ E+ L+ + S + S F+ G HGLHV GLI
Sbjct: 63 LRTWFIITFVMGAIFIGGQVLEYTELVKDAGLSLSSDPYGSVFYLTTGFHGLHVTGGLIA 122
Query: 162 WLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
+L VL K I +S +WHF+D++WI +F+ +Y++
Sbjct: 123 FLLVLGRTYAAKRFTHDQATAAIVVSYYWHFVDVVWIGLFATIYMI 168
>gi|213646953|ref|ZP_03377006.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
Length = 116
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92
GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL SS++ A
Sbjct: 28 GFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAA 87
Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIME 122
+A K + +SWL +T FG FI ME
Sbjct: 88 IA-MHKNNKSQVISWLALTFLFGAGFIGME 116
>gi|260906796|ref|ZP_05915118.1| cytochrome c oxidase subunit III [Brevibacterium linens BL2]
Length = 189
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAA-GPAPIDVFDISGIFVSTIVLLLSSLSCSF 90
+GF ++L SD + FA F Y + +V DI +T++L+ SS +C
Sbjct: 1 MGFIVFLASDLMFFAALFAMYFTIRSVVPELWETQTEVLDIPYALGNTLILVSSSFTCQL 60
Query: 91 AMLASATKRLIHKT----------VSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140
+ A+ R V W +T G +F+ ++ E+A L+S
Sbjct: 61 GVFAAEKFRPRRTGSLFNVAKWGMVEWFYLTFLLGAVFVSGQVMEYATLVSEGIAINSDG 120
Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL--ICLSMFWHFLDLIWI 198
+ S F+ G HG+HV GLI F+LVI G+ IC+S +WHF+D++W+
Sbjct: 121 YGSVFYLTTGFHGIHVTIGLI-CFLLVIGRAYGAKKFGHHDATFAICVSYYWHFVDVVWV 179
Query: 199 CVFSFVYLM 207
+F +YL+
Sbjct: 180 GLFGVIYLL 188
>gi|121608358|ref|YP_996165.1| cytochrome c oxidase subunit III [Verminephrobacter eiseniae
EF01-2]
gi|121552998|gb|ABM57147.1| cytochrome c oxidase, subunit III [Verminephrobacter eiseniae
EF01-2]
Length = 293
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 39 MSDCLMFAVFFVTYAVLGKNYAAGPAPI-DVFDISGIF----VSTIVLLLSSLSCSFAML 93
+ + +++ F + + A PA I + F G F ++T +LL S ++ + A
Sbjct: 120 LDNAMLWPDFKAVWPSMAAGATASPAGIVEPFQTVGPFWLPTINTALLLSSGVTLTIAHH 179
Query: 94 A-SATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA-FLSSFFALVGL 151
A A +R KT+ ++ VT G+ F++++ YE+ HL + + S F S+FF L G
Sbjct: 180 ALRANQRA--KTIGFMWVTVLLGLTFLLVQGYEYTHLYTDLNLKLSSGVFGSTFFMLTGF 237
Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207
HG HVF G++ L V+ +++ K + + +WHF+D++W+ ++ VY M
Sbjct: 238 HGFHVFMGMLMLLVITLRLQKGHFTADKHFGFEGAAWYWHFVDVVWLGLYVLVYWM 293
>gi|108763194|ref|YP_634223.1| cytochrome c oxidase subunit III [Myxococcus xanthus DK 1622]
gi|108467074|gb|ABF92259.1| cytochrome c oxidase, subunit III [Myxococcus xanthus DK 1622]
Length = 222
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 25/202 (12%)
Query: 25 VDHDGTYLGFWIYLMSDCLMFAVFFVTYAV----LGKNYAAGPAPIDVFDISGIFVSTIV 80
V + LG W++L ++ L+FA F+ Y V + +AA +D+ + V+T+V
Sbjct: 27 VQNHAARLGMWLFLATEILLFAGLFICYGVYRFLFPEAWAAASRSLDLTLGT---VNTVV 83
Query: 81 LLLSSLSCSFAM--LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138
L+ SSL+ + A+ +++ + LV A + F++++ +E+ H + +P R
Sbjct: 84 LITSSLTAALAVHYAKEGKNKMVAVQIGLTLVMA---VGFLVIKYFEYHHKFEIGTLPGR 140
Query: 139 ------------SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186
+ + +F LHG+HV G+I L +++ LKK N ++ L
Sbjct: 141 FYSYEGIQLPGVPLYFTVYFCATALHGIHVVIGMIVLAFSMVRALKKADFGPNNYTMVEL 200
Query: 187 -SMFWHFLDLIWICVFSFVYLM 207
SM+WH +DL+WI +F +YL+
Sbjct: 201 GSMYWHLVDLVWIFLFPMLYLV 222
>gi|331005434|ref|ZP_08328813.1| Cytochrome c oxidase polypeptide III [gamma proteobacterium
IMCC1989]
gi|330420710|gb|EGG94997.1| Cytochrome c oxidase polypeptide III [gamma proteobacterium
IMCC1989]
Length = 302
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVS-WLLVTAFFGMIFIIMEIYEFAHLISME 133
F +T VLL SS++ M +A K HK + WL VT GM F+ ++I E++H +
Sbjct: 169 FWNTAVLLTSSVTVH--MAHTALKNANHKLFNIWLGVTVLLGMFFVALQIAEYSHAYEVG 226
Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ-RRLICLSMFWHF 192
+ A+ ++FF L G HG HV G L V+ ++ + KG + + S +WHF
Sbjct: 227 LTLETGAYGTTFFMLTGFHGAHVTIGTFMLLVMWLRSVMKGHFTHDDCFGFESASWYWHF 286
Query: 193 LDLIWICVFSFVYLMG 208
+D++W+ +F FVY++G
Sbjct: 287 VDV