PSIBLAST alignment of GI: 254780472 and protein with PDB id: 1v54

gi|40889825|pdb|1V54|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State Length = 261
>gi|40889838|pdb|1V54|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State Length = 261
 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%)

Query: 19  DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71
               +     G   G  ++++S+ L F  FF  +                P  I   +  
Sbjct: 68  QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127

Query: 72  SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131
               ++T VLL S +S ++A  +       H  +  L +T   G+ F +++  E+     
Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183

Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191
                    + S+FF   G HGLHV  G  +L V   + LK    S +       + +WH
Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243

Query: 192 FLDLIWICVFSFVYLMG 208
           F+D++W+ ++  +Y  G
Sbjct: 244 FVDVVWLFLYVSIYWWG 260