BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780472|ref|YP_003064885.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter asiaticus str. psy62] (210 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780472|ref|YP_003064885.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter asiaticus str. psy62] gi|254040149|gb|ACT56945.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter asiaticus str. psy62] Length = 210 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA Sbjct: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII Sbjct: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ Sbjct: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRLICLSMFWHFLDLIWICVFSFVYLMGVV Sbjct: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 >gi|239817018|ref|YP_002945928.1| cytochrome o ubiquinol oxidase subunit III [Variovorax paradoxus S110] gi|239803595|gb|ACS20662.1| cytochrome o ubiquinol oxidase, subunit III [Variovorax paradoxus S110] Length = 221 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 4/207 (1%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 GK P F LF+V + +GT LGFW+YLMSDCL+FA F Y VLG++YAAGP Sbjct: 18 DATGKPPVFELFHVGNDHHPE---NGTLLGFWLYLMSDCLVFACLFAVYGVLGRSYAAGP 74 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 + D+FD+ + V+T +LLLSS++ FA+L KR+ T++WL +T G FI +E+ Sbjct: 75 SGADLFDLPLVAVNTSLLLLSSITYGFAVLEMQRKRM-GGTLAWLAITGLLGAGFIGLEL 133 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEFAHLI A PQRSAFLSSFFALVG HGLHV FG++WL VL+IQ+ K G + N+RRL Sbjct: 134 YEFAHLIHEGAGPQRSAFLSSFFALVGTHGLHVTFGIVWLIVLMIQLPKHGFTAANRRRL 193 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD++WI VF+FVYLMG + Sbjct: 194 MCLSMFWHFLDVVWIGVFTFVYLMGSM 220 >gi|319795347|ref|YP_004156987.1| cytochrome o ubiquinol oxidase, subunit iii [Variovorax paradoxus EPS] gi|315597810|gb|ADU38876.1| cytochrome o ubiquinol oxidase, subunit III [Variovorax paradoxus EPS] Length = 221 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 116/207 (56%), Positives = 149/207 (71%), Gaps = 4/207 (1%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 + GK P F LF+V + +GT LGFW+YLMSDCL+FA F Y VLG++YAAGP Sbjct: 18 DQTGKPPVFELFHVGNDHHPE---NGTLLGFWLYLMSDCLIFACLFAVYGVLGRSYAAGP 74 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 + D+FD+ + ++T +LLLSS++ FAML KR+ + WL +T G FI +E+ Sbjct: 75 SGADLFDLPLVAINTSLLLLSSITYGFAMLEMQKKRM-GGVLVWLAITGLLGAGFIGLEL 133 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEFAHL+ A PQRSAFLSSFFALVG HGLHV FG+IWL VL+IQ+ K G + N+RRL Sbjct: 134 YEFAHLLHEGAGPQRSAFLSSFFALVGTHGLHVSFGIIWLIVLMIQLPKHGFTAANRRRL 193 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD++WI VF+FVYLMG + Sbjct: 194 MCLSMFWHFLDVVWIGVFTFVYLMGSM 220 >gi|116694972|ref|YP_729183.1| bo3-type chinol oxidase, subunit III [Ralstonia eutropha H16] gi|113529471|emb|CAJ95818.1| bo3-type chinol oxidase, subunit III [Ralstonia eutropha H16] Length = 218 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 108/207 (52%), Positives = 142/207 (68%), Gaps = 4/207 (1%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 P FY+ + +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP Sbjct: 15 TADAAPPGGYQFYLPEDHHP---QNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGP 71 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 + ++F++ + ++T LLLSS++ FAML + I T WL +T FG F+ +E+ Sbjct: 72 SGAELFELPLVALNTSFLLLSSITYGFAMLQMQ-QNRIAGTQIWLAITGVFGAGFLAVEL 130 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEFAHLI+ A PQRSAFL+SFFALVG HGLHV G+IWL VL+ Q+ + GLI+ N+RRL Sbjct: 131 YEFAHLINEGAGPQRSAFLTSFFALVGTHGLHVTCGIIWLVVLMTQVAQHGLITANKRRL 190 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD++WI VF+FVYLMG + Sbjct: 191 MCLSMFWHFLDVVWIGVFTFVYLMGAL 217 >gi|323257871|gb|EGA41550.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 276 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 2/194 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFW+YLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGQ-NKIFGFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A + +SWL +T FG FI ME+YEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIAMHKNN-KSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGV 209 IWICVF+ VYLMG Sbjct: 190 IWICVFTVVYLMGA 203 >gi|311108525|ref|YP_003981378.1| cytochrome O ubiquinol oxidase subunit III 2 [Achromobacter xylosoxidans A8] gi|310763214|gb|ADP18663.1| cytochrome O ubiquinol oxidase, subunit III 2 [Achromobacter xylosoxidans A8] Length = 213 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 116/204 (56%), Positives = 145/204 (71%), Gaps = 4/204 (1%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 P +FYV + +GT LGFW+YLMSDCL+FA F TY VLG+NYAAGP+ Sbjct: 13 AAPPAEPVFYVAGEHHPK---NGTLLGFWVYLMSDCLIFACLFATYGVLGRNYAAGPSGA 69 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+FD+ + V+T +LLLSS++ FAML R + T WL VT G+ F+ +E+YEF Sbjct: 70 DLFDLPLVAVNTALLLLSSITYGFAMLEMRRNR-VGATQLWLAVTGILGLGFLSLELYEF 128 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 AHLI A PQRSAFLSSFF LVG HGLHV FG++WL ++IQ+ GLI N+RRL+CL Sbjct: 129 AHLIHQGAGPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTMMIQVQMHGLIPENRRRLMCL 188 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLDLIW+ VF+FVYLMGV+ Sbjct: 189 SMFWHFLDLIWVGVFTFVYLMGVL 212 >gi|194292956|ref|YP_002008863.1| cytochrome o ubiquinol oxidase, subunit iii [Cupriavidus taiwanensis LMG 19424] gi|193226860|emb|CAQ72811.1| cytochrome o ubiquinol oxidase, subunit III [Cupriavidus taiwanensis LMG 19424] Length = 224 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 112/207 (54%), Positives = 143/207 (69%), Gaps = 4/207 (1%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 Q P FY+ ++ +GT LGFW+YLMSDCL+FA F Y VLG+NYA GP Sbjct: 21 QHAPAQPAALRFYMTEEYH---VPNGTLLGFWLYLMSDCLVFACLFAAYGVLGRNYAGGP 77 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 + ++FD+ + ++T LLLSS++ FAML + RL T WL VT G F+ +EI Sbjct: 78 SGAELFDLPLVALNTSFLLLSSITYGFAMLEAQRGRLGP-TQGWLAVTGLLGAAFLAVEI 136 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEFAHL+ A PQRS FL+SFFALVG HGLHV FG++WL LV Q+ + GLI N+RRL Sbjct: 137 YEFAHLVGEGAGPQRSGFLTSFFALVGTHGLHVTFGIVWLVTLVSQLRRHGLIPENRRRL 196 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD++WI VF+FVYLMGV+ Sbjct: 197 MCLSMFWHFLDVVWIGVFTFVYLMGVL 223 >gi|319786909|ref|YP_004146384.1| cytochrome o ubiquinol oxidase subunit III [Pseudoxanthomonas suwonensis 11-1] gi|317465421|gb|ADV27153.1| cytochrome o ubiquinol oxidase, subunit III [Pseudoxanthomonas suwonensis 11-1] Length = 211 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 112/213 (52%), Positives = 148/213 (69%), Gaps = 6/213 (2%) Query: 1 MSRQKIGKSP---NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK 57 MS + SP + + FY +GT LGFW+YLMSD L+FA F Y VLG+ Sbjct: 1 MSDAALASSPLAGDPNRFYDTGGHHHP--QNGTLLGFWLYLMSDLLIFACLFAVYGVLGR 58 Query: 58 NYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMI 117 +YAAGP D+FD+ + V+T +LLLSS++ FAML+ + + WL VT FG+ Sbjct: 59 SYAAGPTGADLFDLPLVAVNTAMLLLSSITYGFAMLSMQRRNT-AGVLGWLAVTGLFGLA 117 Query: 118 FIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLIS 177 F+ +E+YEF+HLI A PQRSAFLSSFFALVG HGLHV FG++WL VL++Q+ + GL Sbjct: 118 FLGLELYEFSHLIHEGAGPQRSAFLSSFFALVGTHGLHVAFGIVWLVVLMVQVQRHGLHE 177 Query: 178 GNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 N+RRL+CLS+FWHFLD++WI VF+FVYLMGV+ Sbjct: 178 ANRRRLMCLSLFWHFLDVVWIGVFTFVYLMGVL 210 >gi|220924641|ref|YP_002499943.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium nodulans ORS 2060] gi|219949248|gb|ACL59640.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium nodulans ORS 2060] Length = 222 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 119/212 (56%), Positives = 152/212 (71%), Gaps = 6/212 (2%) Query: 1 MSRQKIGKSPNFS--LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKN 58 M+ P LFY +++ GT LGFWIYLMSDCL+FAV F TY VLG++ Sbjct: 14 MTMHANTAPPGTEAPLFYAEEEH---AHESGTLLGFWIYLMSDCLVFAVLFATYGVLGRS 70 Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118 YAAGP+P DVF++ + V+T +LLLSS++ FAML ++ WL+VT FG F Sbjct: 71 YAAGPSPNDVFNLPIVAVNTTMLLLSSITYGFAMLEMDKGQVR-GMQRWLVVTGLFGAAF 129 Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178 I +E+YEFAH+I A PQRS FLSSFFALVG HGLHV FGL+WL VL++Q+ ++GLI+ Sbjct: 130 IGIELYEFAHMIREGATPQRSGFLSSFFALVGTHGLHVTFGLVWLSVLMVQVAQRGLIAD 189 Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 N RRL+CLSMFWHFLD++WI VF+FVYLMGV+ Sbjct: 190 NMRRLLCLSMFWHFLDVVWIGVFTFVYLMGVL 221 >gi|293607336|ref|ZP_06689675.1| quinol oxidase subunit III [Achromobacter piechaudii ATCC 43553] gi|292814180|gb|EFF73322.1| quinol oxidase subunit III [Achromobacter piechaudii ATCC 43553] Length = 213 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 116/204 (56%), Positives = 145/204 (71%), Gaps = 4/204 (1%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 P +FYV + +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP+ Sbjct: 13 ATPPTEPVFYVPGEHHPK---NGTLLGFWVYLMSDCLIFACLFATYGVLGRSYAAGPSGA 69 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+FD+ + V+T +LLLSS++ FAML R I T WL VT G+ F+ +EIYEF Sbjct: 70 DLFDLPLVAVNTSLLLLSSITYGFAMLEMRRNR-IGATQLWLAVTGLLGLGFLSLEIYEF 128 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 AHLI A PQRSAFLS+FF LVG HGLHV FG++WL ++IQ+ GLI N+RRL+CL Sbjct: 129 AHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGIVWLVTMMIQVQMHGLIPENRRRLMCL 188 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLDLIW+ VF+FVYLMGV+ Sbjct: 189 SMFWHFLDLIWVGVFTFVYLMGVL 212 >gi|187928956|ref|YP_001899443.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii 12J] gi|187725846|gb|ACD27011.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii 12J] Length = 221 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 107/209 (51%), Positives = 142/209 (67%), Gaps = 4/209 (1%) Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61 + P F+V ++ +GT LGFW+YLMSDCL+FA F Y VLG+ YA Sbjct: 16 TTTADDVPPGGYQFHVTEEPH---VPNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAG 72 Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121 GP ++F++ + ++T LLLSS++ FAML + + WL +T FG F+ + Sbjct: 73 GPTGAELFELPLVALNTSFLLLSSITYGFAMLQLQ-QNKVSAMQIWLAITWVFGAAFLAV 131 Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181 E+YEFAHLI A P RSAFL+SFF+LVG HGLHV FGLIWL VL++Q+ K GLI+ N+R Sbjct: 132 ELYEFAHLIHEGAGPTRSAFLTSFFSLVGTHGLHVTFGLIWLIVLMVQVSKHGLITANKR 191 Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RL+CLSMFWHFLD++WI VF+FVYLMG + Sbjct: 192 RLMCLSMFWHFLDVVWIGVFTFVYLMGTL 220 >gi|315122072|ref|YP_004062561.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495474|gb|ADR52073.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 209 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 171/211 (81%), Positives = 188/211 (89%), Gaps = 3/211 (1%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCV-DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY 59 MS++KIGKSPN +FY+K++K SC+ HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY Sbjct: 1 MSKRKIGKSPNTPVFYLKEEKGSCIDHHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY 60 Query: 60 AAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFI 119 AAGPAPID+F I I VSTIVLLLSSLS SFAMLAS +KTV WLLVTAFFG+IFI Sbjct: 61 AAGPAPIDIFGIRDILVSTIVLLLSSLSYSFAMLASEDV--KNKTVFWLLVTAFFGIIFI 118 Query: 120 IMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179 +MEI+EFAHLIS A PQRSAFLSSFF+LV LHGLHVFFGLIW+F+LVIQILKKGLI N Sbjct: 119 MMEIHEFAHLISKGATPQRSAFLSSFFSLVALHGLHVFFGLIWIFILVIQILKKGLIPDN 178 Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 +RRL+CLSMFWHFLDLIWICVFSFVYLMGVV Sbjct: 179 RRRLMCLSMFWHFLDLIWICVFSFVYLMGVV 209 >gi|241663144|ref|YP_002981504.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii 12D] gi|309781938|ref|ZP_07676669.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia sp. 5_7_47FAA] gi|240865171|gb|ACS62832.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii 12D] gi|308919282|gb|EFP64948.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia sp. 5_7_47FAA] Length = 221 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 107/204 (52%), Positives = 141/204 (69%), Gaps = 4/204 (1%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 P F+V ++ +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP Sbjct: 21 DIPPGGYQFHVTEEPH---VPNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGPTGA 77 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 ++F++ + ++T LLLSS++ FAML ++ WL +T FG F+ +E+YEF Sbjct: 78 ELFELPLVALNTSFLLLSSITYGFAMLQLQQNKIS-AMQIWLAITWVFGAAFLAVELYEF 136 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 AHLI A P RSAFL+SFF+LVG HGLHV FGLIWL VL++Q+ K GLI+ N+RRL+CL Sbjct: 137 AHLIHEGAGPTRSAFLTSFFSLVGTHGLHVTFGLIWLIVLMVQVSKHGLITANKRRLMCL 196 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLD++WI VF+FVYLMG + Sbjct: 197 SMFWHFLDVVWIGVFTFVYLMGTL 220 >gi|94314529|ref|YP_587738.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus metallidurans CH34] gi|93358381|gb|ABF12469.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus metallidurans CH34] Length = 218 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 106/207 (51%), Positives = 143/207 (69%), Gaps = 4/207 (1%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 P FY+ ++ +GT LGFW+YLMSDCL+FA F Y VLG+ YA GP Sbjct: 15 DADQAPPGGYQFYLTEEVHP---QNGTLLGFWLYLMSDCLIFACLFAAYGVLGREYAGGP 71 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 + ++F++ + ++T LL+SS++ FAML + + T WL +T FG F+ +E+ Sbjct: 72 SGAELFELPLVALNTSFLLISSITYGFAMLQMQ-QNRVASTQIWLAITGVFGAAFLTVEL 130 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEFAHLI A PQRSAFL+SFF+LVG HGLHV FG+IWL VL+ Q+ + GLI+ N+RRL Sbjct: 131 YEFAHLIHEGAGPQRSAFLTSFFSLVGTHGLHVTFGIIWLIVLMTQVARHGLITANKRRL 190 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD++WI VF+FVYLMG + Sbjct: 191 MCLSMFWHFLDVVWIGVFTFVYLMGSL 217 >gi|330824828|ref|YP_004388131.1| cytochrome o ubiquinol oxidase subunit III [Alicycliphilus denitrificans K601] gi|329310200|gb|AEB84615.1| cytochrome o ubiquinol oxidase, subunit III [Alicycliphilus denitrificans K601] Length = 210 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 111/193 (57%), Positives = 137/193 (70%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 +GT LGFW+YLMSDCL+FAV F TY VLG+NYA GP ++FD+ + ++ Sbjct: 19 YHLAHEPHPENGTSLGFWLYLMSDCLIFAVLFATYGVLGRNYAGGPTGAELFDLKLVAIN 78 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAML + + T++WL VT G+ F+ +E+YEFAHL+ A PQ Sbjct: 79 TAFLLLSSITFGFAMLQKQQRDVR-GTLAWLAVTGLLGLAFLAVELYEFAHLLHEGAGPQ 137 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG HGLHV FG IWL L+IQI K GLI N RRL CLSMFWHFLD++W Sbjct: 138 RSAFLSSFFTLVGTHGLHVTFGTIWLVTLMIQIGKHGLIPENARRLNCLSMFWHFLDVVW 197 Query: 198 ICVFSFVYLMGVV 210 I VF+FVYLMGV+ Sbjct: 198 IGVFTFVYLMGVL 210 >gi|332184930|ref|ZP_08386679.1| cytochrome o ubiquinol oxidase, subunit III [Sphingomonas sp. S17] gi|332014654|gb|EGI56710.1| cytochrome o ubiquinol oxidase, subunit III [Sphingomonas sp. S17] Length = 212 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 109/212 (51%), Positives = 150/212 (70%), Gaps = 3/212 (1%) Query: 1 MSRQKIGKSP--NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKN 58 MS + P N + + V+D+ T +GFW+YLMSDCL+FA+ F TY VLG + Sbjct: 1 MSTDVLSADPAKNPTYYLVEDEDHHHESGGSTAIGFWMYLMSDCLIFAILFATYGVLGTS 60 Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118 YA GP P ++F++ + ++T +LLLSS++ FAM+A + + T+ WL +T FG+ F Sbjct: 61 YAGGPTPREIFELPLVALNTSMLLLSSITYGFAMIAMEKNQKSN-TLIWLGITGLFGLAF 119 Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178 + +E+YEFA+LI A PQRSAFLSSFF LVG HGLHV FG IWL L++Q+ + GLI Sbjct: 120 LSIELYEFANLIHEGAGPQRSAFLSSFFTLVGTHGLHVTFGSIWLVTLMVQVGRFGLIEA 179 Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 N+RRL+CLSMFWHFLD++WI VF+FVYL+GV+ Sbjct: 180 NKRRLMCLSMFWHFLDVVWIGVFTFVYLLGVL 211 >gi|152980608|ref|YP_001354328.1| cytochrome o ubiquinol oxidase subunit III [Janthinobacterium sp. Marseille] gi|151280685|gb|ABR89095.1| cytochrome o ubiquinol oxidase subunit III [Janthinobacterium sp. Marseille] Length = 210 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 112/203 (55%), Positives = 144/203 (70%), Gaps = 5/203 (2%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67 + + +YV++ +GT LGFW+YLMSDCL+FA F TYAVLG+NYA GP + Sbjct: 12 SADPSARYYVQEHHP----ENGTLLGFWLYLMSDCLIFACLFATYAVLGRNYAGGPTGAE 67 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 +FD+ + +T LLLSS++ FAML + KRL T+ WL +T G F+ +E+YEF+ Sbjct: 68 LFDLPLVAANTAFLLLSSITYGFAMLEAQRKRLK-ATMIWLAITGLLGAAFLALELYEFS 126 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 HLI A PQRSAFL+SFFALV HGLHV FG+IWL L+ Q+ + GLI N RRL+CLS Sbjct: 127 HLIHEGAGPQRSAFLTSFFALVATHGLHVTFGIIWLITLMFQLKRHGLIPENGRRLMCLS 186 Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210 MFWHFLD+IWI VF+FVYLMGV+ Sbjct: 187 MFWHFLDVIWIGVFTFVYLMGVL 209 >gi|33593693|ref|NP_881337.1| cytochrome ubiquinol oxidase subunit III [Bordetella pertussis Tohama I] gi|33563766|emb|CAE43006.1| cytochrome ubiquinol oxidase subunit III [Bordetella pertussis Tohama I] gi|332383097|gb|AEE67944.1| cytochrome ubiquinol oxidase subunit III [Bordetella pertussis CS] Length = 213 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 112/204 (54%), Positives = 143/204 (70%), Gaps = 4/204 (1%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 LFYV + +GT LGFW+YLMSDCL+FA F TY V+G+NY GP Sbjct: 13 AAPDPERLFYVPGEHHPK---NGTLLGFWVYLMSDCLVFACLFATYGVVGRNYDGGPTGA 69 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 ++FD+ + V+T +LLLSS++ FAML +R I T +WL VT G F+ +E+YEF Sbjct: 70 ELFDLPLVAVNTSLLLLSSITYGFAMLEMRRQR-IGATQAWLAVTGLLGAGFLGLELYEF 128 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 AHLI A PQRSAFLS+FF LVG HGLHV FG++WL L++Q+ + GLI N+RRL+CL Sbjct: 129 AHLIHQGAGPQRSAFLSAFFTLVGTHGLHVTFGIVWLVTLMVQVARHGLIPENRRRLMCL 188 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLDLIW+ VF+FVYLMGV+ Sbjct: 189 SMFWHFLDLIWVGVFTFVYLMGVL 212 >gi|319762687|ref|YP_004126624.1| cytochrome o ubiquinol oxidase, subunit iii [Alicycliphilus denitrificans BC] gi|317117248|gb|ADU99736.1| cytochrome o ubiquinol oxidase, subunit III [Alicycliphilus denitrificans BC] Length = 210 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 111/193 (57%), Positives = 137/193 (70%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 +GT LGFW+YLMSDCL+FAV F TY VLG+NYA GP ++FD+ + ++ Sbjct: 19 YHLAHEPHPENGTSLGFWLYLMSDCLIFAVLFATYGVLGRNYAGGPTGAELFDLKLVAIN 78 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAML + + T++WL VT G+ F+ +E+YEFAHL+ A PQ Sbjct: 79 TAFLLLSSITFGFAMLQKQQRDVR-GTLAWLAVTGLLGLAFLAVELYEFAHLLHEGAGPQ 137 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG HGLHV FG IWL L+IQI K GLI N RRL CLSMFWHFLD++W Sbjct: 138 RSAFLSSFFTLVGTHGLHVTFGTIWLVTLMIQIGKHGLIPENARRLNCLSMFWHFLDVVW 197 Query: 198 ICVFSFVYLMGVV 210 I VF+FVYLMGV+ Sbjct: 198 IGVFTFVYLMGVL 210 >gi|317403927|gb|EFV84396.1| cytochrome ubiquinol oxidase subunit III [Achromobacter xylosoxidans C54] Length = 213 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 114/203 (56%), Positives = 145/203 (71%), Gaps = 4/203 (1%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67 P +F+V + +GT LGFW+YLMSDCL+FA F TY VLG+NYAAGP+ D Sbjct: 14 APPAEPVFHVAGEHHPK---NGTLLGFWVYLMSDCLIFACLFATYGVLGRNYAAGPSGAD 70 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 +FD+ + V+T +LLLSS++ FAML R + T WL VT G+ F+ +E+YEFA Sbjct: 71 LFDLPLVAVNTSLLLLSSITYGFAMLEMRRNR-VGATQGWLAVTGLLGLGFLSLELYEFA 129 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 HLI A PQRSAFLSSFF LVG HGLHV FG++WL +++Q+ GLI N+RRL+CLS Sbjct: 130 HLIHQGAGPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTMMVQVRMHGLIPENRRRLMCLS 189 Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210 MFWHFLDLIW+ VF+FVYLMGV+ Sbjct: 190 MFWHFLDLIWVGVFTFVYLMGVL 212 >gi|222111441|ref|YP_002553705.1| cytochrome o ubiquinol oxidase subunit III [Acidovorax ebreus TPSY] gi|221730885|gb|ACM33705.1| cytochrome o ubiquinol oxidase, subunit III [Acidovorax ebreus TPSY] Length = 211 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 113/212 (53%), Positives = 143/212 (67%), Gaps = 3/212 (1%) Query: 1 MSRQKIGKSPNFSLFYVKDKK--ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKN 58 MS ++ + ++ +GT LGFW+YLMSDCL+FA F TY VLG++ Sbjct: 1 MSNTHTLQAGGTAALAPREYHLAHEPHPENGTSLGFWLYLMSDCLIFAALFATYGVLGRS 60 Query: 59 YAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIF 118 YAAGP +FD+S + ++T LL SS++ FAML T++WL VT G+ F Sbjct: 61 YAAGPTGAQLFDLSLVAINTAFLLTSSITFGFAMLQKQAGNAR-GTLAWLAVTGLLGLAF 119 Query: 119 IIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG 178 + +E+YEFAHLI A PQRSAFLS+FF LVG HGLHV FGLIWL L+IQI K GLI Sbjct: 120 LGVELYEFAHLIHQGATPQRSAFLSAFFTLVGTHGLHVTFGLIWLVTLMIQISKHGLIHE 179 Query: 179 NQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 N+RRL CLSMFWHFLD++WI VF+FVYLMGV+ Sbjct: 180 NKRRLNCLSMFWHFLDVVWIGVFTFVYLMGVL 211 >gi|221067297|ref|ZP_03543402.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni KF-1] gi|264678284|ref|YP_003278191.1| cytochrome C oxidase subunit III [Comamonas testosteroni CNB-2] gi|299532080|ref|ZP_07045474.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni S44] gi|220712320|gb|EED67688.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni KF-1] gi|262208797|gb|ACY32895.1| cytochrome c oxidase, subunit III [Comamonas testosteroni CNB-2] gi|298719742|gb|EFI60705.1| cytochrome o ubiquinol oxidase, subunit III [Comamonas testosteroni S44] Length = 210 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 109/193 (56%), Positives = 138/193 (71%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 +GT LGFW+YLMSDCL+FA F TY VLG++YA GP+ D+FD+S + V+ Sbjct: 19 YHLAHEPHPENGTSLGFWLYLMSDCLIFAALFATYGVLGRSYAGGPSGKDLFDLSLVAVN 78 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LL+SS++ FAML K+ ++ T+ WL VT G F+ +E+YEF HLI A PQ Sbjct: 79 TAFLLMSSITFGFAMLQ-KQKKNVNGTLLWLAVTGLLGAAFLAVELYEFHHLIHQGATPQ 137 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 SAFLSSFF LVG HG+HV FGL+WL L+IQI K GLI+ N RR+ CLSMFWHFLD++W Sbjct: 138 SSAFLSSFFTLVGTHGIHVTFGLVWLITLMIQIKKHGLINENVRRINCLSMFWHFLDVVW 197 Query: 198 ICVFSFVYLMGVV 210 I VF+FVYLMGV+ Sbjct: 198 IGVFTFVYLMGVL 210 >gi|33600294|ref|NP_887854.1| cytochrome ubiquinol oxidase subunit III [Bordetella bronchiseptica RB50] gi|33567893|emb|CAE31806.1| cytochrome ubiquinol oxidase subunit III [Bordetella bronchiseptica RB50] Length = 212 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 112/197 (56%), Positives = 143/197 (72%), Gaps = 4/197 (2%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 LFYV + +GT LGFW+YLMSDCL+FA F TY V+G+NY GP ++FD+ Sbjct: 19 LFYVPGEHHPK---NGTLLGFWVYLMSDCLVFACLFATYGVVGRNYDGGPTGAELFDLPL 75 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + V+T +LLLSS++ FAML +R I T +WL VT G F+ +E+YEFAHLI Sbjct: 76 VAVNTSLLLLSSITYGFAMLEMRRQR-IGATQAWLAVTGLLGAGFLGLELYEFAHLIHQG 134 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 A PQRSAFLS+FF LVG HGLHV FG++WL L++Q+ + GLI N+RRL+CLSMFWHFL Sbjct: 135 AGPQRSAFLSAFFTLVGTHGLHVTFGIVWLVTLMVQVSRHGLIPENRRRLMCLSMFWHFL 194 Query: 194 DLIWICVFSFVYLMGVV 210 DLIW+ VF+FVYLMGV+ Sbjct: 195 DLIWVGVFTFVYLMGVL 211 >gi|329296775|ref|ZP_08254111.1| CyoC [Plautia stali symbiont] Length = 204 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 98/198 (49%), Positives = 126/198 (63%), Gaps = 1/198 (0%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + GFWIYLMSDC++FA F TYAV+ N A GPA D+F++ Sbjct: 8 HHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFELP 67 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + V T +LLLSS++ A++A + +SWL +T FG FI MEIYEF HLI Sbjct: 68 FVLVETALLLLSSITYGMAVIA-MNNQNKGSVISWLALTFLFGAGFIGMEIYEFHHLIKE 126 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS FF LVG HGLHV GLIW+ VL+ QI K+GL + N+ R++CLS+FWHF Sbjct: 127 GFGPDRSGFLSGFFTLVGTHGLHVSSGLIWMAVLMFQIAKRGLSATNRTRIMCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYLMG + Sbjct: 187 LDVVWICVFTVVYLMGAM 204 >gi|160899493|ref|YP_001565075.1| cytochrome o ubiquinol oxidase subunit III [Delftia acidovorans SPH-1] gi|160365077|gb|ABX36690.1| cytochrome o ubiquinol oxidase, subunit III [Delftia acidovorans SPH-1] Length = 210 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 110/196 (56%), Positives = 141/196 (71%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 +++ ++ +GT LGFW+YLMSDCL+FA F TY VLG+NYAAGP +FD+ + Sbjct: 19 YHLAEEPHPE---NGTALGFWLYLMSDCLIFAALFATYGVLGRNYAAGPTGAQLFDLPLV 75 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T LLLSS++ FAML + + T WL +T FG+ F+ +E+YEF+HL+ A Sbjct: 76 AMNTAFLLLSSITFGFAMLQ-KQQGKLGGTQLWLAITGLFGLCFLGLELYEFSHLLHEGA 134 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLSSFF LVG HGLHV FGLIWL L+IQI K GL N RRL+CLSMFWHFLD Sbjct: 135 GPQRSAFLSSFFTLVGTHGLHVSFGLIWLVTLMIQINKHGLTHENNRRLMCLSMFWHFLD 194 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VF+FVYLMGV+ Sbjct: 195 VVWIGVFTFVYLMGVL 210 >gi|307309511|ref|ZP_07589167.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti BL225C] gi|306900096|gb|EFN30716.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti BL225C] Length = 210 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 115/196 (58%), Positives = 149/196 (76%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 FY+ ++ T LGFW+YLMSDCL+FAV F T+AVLG+NYAAGP+P D+FD+ + Sbjct: 18 FYLTEEHHPEG---STMLGFWLYLMSDCLIFAVLFATHAVLGRNYAAGPSPADLFDLPLV 74 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 V+T +LL SS++ FAMLA T++W+ VTA FG+ F+ +E+YEFAHL+ A Sbjct: 75 AVNTSMLLFSSITYGFAMLAMERYDKKT-TLAWMAVTALFGIAFVGLELYEFAHLLHEGA 133 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLSSFF LVG HGLHV G++W+FVL+ Q+ K+GLI N+RRL+CLSMFWHFLD Sbjct: 134 GPQRSAFLSSFFTLVGTHGLHVTAGIVWMFVLMAQVAKRGLIPENKRRLMCLSMFWHFLD 193 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VFSFVYLMGV+ Sbjct: 194 VVWIGVFSFVYLMGVL 209 >gi|16265065|ref|NP_437857.1| putative cytochrome o ubiquinol oxidase chain III protein [Sinorhizobium meliloti 1021] gi|307320581|ref|ZP_07599995.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti AK83] gi|13398498|gb|AAK21905.1| ubiquinol oxidase subunit-like protein [Sinorhizobium meliloti] gi|15141204|emb|CAC49717.1| putative cytochrome o ubiquinol oxidase chain III protein [Sinorhizobium meliloti 1021] gi|306893731|gb|EFN24503.1| cytochrome o ubiquinol oxidase, subunit III [Sinorhizobium meliloti AK83] Length = 210 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 115/196 (58%), Positives = 148/196 (75%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 FY+ ++ T LGFW+YLMSDCL+FAV F T+AVLG+NYAAGP+P D+FD+ + Sbjct: 18 FYLTEEHHPEG---STMLGFWLYLMSDCLIFAVLFATHAVLGRNYAAGPSPADLFDLPLV 74 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 V+T +LL SS++ FAMLA T++W+ VTA FG+ F+ +E YEFAHL+ A Sbjct: 75 AVNTSMLLFSSITYGFAMLAMERYEKK-ATLTWMAVTALFGIAFVGLEFYEFAHLLHEGA 133 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLSSFF LVG HGLHV G++W+FVL+ Q+ K+GLI N+RRL+CLSMFWHFLD Sbjct: 134 GPQRSAFLSSFFTLVGTHGLHVTAGIVWMFVLMAQVAKRGLIPENKRRLMCLSMFWHFLD 193 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VFSFVYLMGV+ Sbjct: 194 VVWIGVFSFVYLMGVL 209 >gi|304395492|ref|ZP_07377375.1| cytochrome o ubiquinol oxidase, subunit III [Pantoea sp. aB] gi|304356786|gb|EFM21150.1| cytochrome o ubiquinol oxidase, subunit III [Pantoea sp. aB] Length = 204 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 96/198 (48%), Positives = 127/198 (64%), Gaps = 1/198 (0%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + GFWIYLMSDC++FA F TYAV+ N A GPA D+F++ Sbjct: 8 HHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFELP 67 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + V T +LLLSS++ A+++ K + WL +T FG+ FI MEIYEF HLI+ Sbjct: 68 FVLVETALLLLSSITYGMAVIS-MNKEQKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAE 126 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS FF LVG HGLHV GLIW+ VL+ Q+ K+GL + N+ R++CLS+FWHF Sbjct: 127 GFGPDRSGFLSGFFTLVGTHGLHVTSGLIWMLVLMFQVSKRGLNATNRTRIMCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYLMG + Sbjct: 187 LDVVWICVFTVVYLMGAM 204 >gi|163853732|ref|YP_001641775.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium extorquens PA1] gi|240141157|ref|YP_002965637.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium extorquens AM1] gi|163665337|gb|ABY32704.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium extorquens PA1] gi|240011134|gb|ACS42360.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium extorquens AM1] Length = 215 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 116/191 (60%), Positives = 141/191 (73%), Gaps = 4/191 (2%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + GT LGFWIYLMSDCL+FAV F TYAVLG++YAAGP+P D+FD+ + V+T Sbjct: 28 EHHPEG---GTMLGFWIYLMSDCLIFAVLFATYAVLGRSYAAGPSPKDLFDLPIVAVNTS 84 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FAMLA + KT WL +T FG F+ +E+YEFAHLI A PQRS Sbjct: 85 MLLFSSITYGFAMLAMEKDD-LAKTQLWLAITGLFGAAFVGLELYEFAHLIHEGATPQRS 143 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 FLS+FF LVG HGLHV FGLIWL L+IQ KGL + N+RRL+CLSMFWHFLD+IWI Sbjct: 144 GFLSAFFTLVGTHGLHVTFGLIWLVTLMIQTRLKGLGAENKRRLMCLSMFWHFLDVIWIG 203 Query: 200 VFSFVYLMGVV 210 VF+FVYLMGV+ Sbjct: 204 VFTFVYLMGVL 214 >gi|301631835|ref|XP_002945000.1| PREDICTED: cytochrome o ubiquinol oxidase subunit 3-like [Xenopus (Silurana) tropicalis] Length = 214 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 108/194 (55%), Positives = 139/194 (71%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 +GT LGFW+YLMSDCL+FA F TY VLG++YA GP ++FD+ + + Sbjct: 22 TYHLAHEPHPENGTALGFWLYLMSDCLIFAALFATYGVLGRSYAGGPTGAELFDLPLVAL 81 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 +T LLLSS++ FAML + + T+ WL VT FG+ F+ +E+YEF HLI A P Sbjct: 82 NTAFLLLSSITFGFAMLQ-KQQNKVGGTLVWLAVTGLFGLCFLGLELYEFHHLIHQGAGP 140 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 QRSAFLS+FF LV HGLHV FGL+WL VL++QI ++GLI NQRRL+CLSMFWHFLD++ Sbjct: 141 QRSAFLSAFFTLVATHGLHVSFGLVWLVVLMVQIAQRGLIHENQRRLMCLSMFWHFLDVV 200 Query: 197 WICVFSFVYLMGVV 210 WI VF+FVYLMGV+ Sbjct: 201 WIGVFTFVYLMGVL 214 >gi|308185900|ref|YP_003930031.1| cytochrome o ubiquinol oxidase subunit III [Pantoea vagans C9-1] gi|308056410|gb|ADO08582.1| cytochrome o ubiquinol oxidase subunit III [Pantoea vagans C9-1] Length = 205 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 96/198 (48%), Positives = 127/198 (64%), Gaps = 1/198 (0%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + GFWIYLMSDC++FA F TYAV+ N A GPA D+F++ Sbjct: 9 HHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFELP 68 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + V T +LLLSS++ A+++ K + WL +T FG+ FI MEIYEF HLI+ Sbjct: 69 FVLVETALLLLSSITYGMAVIS-MNKEQKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAE 127 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS FF LVG HGLHV GLIW+ VL+ Q+ K+GL + N+ R++CLS+FWHF Sbjct: 128 GFGPDRSGFLSGFFTLVGTHGLHVTSGLIWMLVLMFQVSKRGLNATNRTRIMCLSLFWHF 187 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYLMG + Sbjct: 188 LDVVWICVFTVVYLMGAM 205 >gi|291616542|ref|YP_003519284.1| CyoC [Pantoea ananatis LMG 20103] gi|291151572|gb|ADD76156.1| CyoC [Pantoea ananatis LMG 20103] gi|327392973|dbj|BAK10395.1| cytochrome o ubiquinol oxidase subunit III CyoC [Pantoea ananatis AJ13355] Length = 204 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 97/198 (48%), Positives = 125/198 (63%), Gaps = 1/198 (0%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + GFWIYLMSDC++FA F TYAV+ + A GPA D+F++ Sbjct: 8 HHHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYAVMVNSTAGGPAGKDIFELP 67 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + V T +LLLSS++ A++A K + WL +T FG FI MEIYEF HLI Sbjct: 68 FVLVETALLLLSSITYGMAVIA-MNKENKGAVIGWLALTFLFGAGFIGMEIYEFHHLIVE 126 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS FF LVG HGLHV GLIW+ VL+ QI K+GL + N+ R++CLS+FWHF Sbjct: 127 GFGPDRSGFLSGFFTLVGTHGLHVTSGLIWMAVLMFQIAKRGLNATNRTRIMCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYLMG + Sbjct: 187 LDVVWICVFTVVYLMGAM 204 >gi|259909262|ref|YP_002649618.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia pyrifoliae Ep1/96] gi|224964884|emb|CAX56406.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia pyrifoliae Ep1/96] gi|283479314|emb|CAY75230.1| cytochrome o ubiquinol oxidase subunit III [Erwinia pyrifoliae DSM 12163] gi|310766835|gb|ADP11785.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia sp. Ejp617] Length = 204 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 97/197 (49%), Positives = 127/197 (64%), Gaps = 1/197 (0%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + GFWIYLMSDC++FA F TY V+ N A GPA D+F++ Sbjct: 9 HHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYGVMVNNTAGGPAGKDIFELPF 68 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + V T +LLLSS++ FA++ + K + WL +T FG+ FI MEIYEF HLI+ Sbjct: 69 VLVETALLLLSSITYGFAVI-NMNKGQKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAEG 127 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 P RS FLS FF LVG HGLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFL Sbjct: 128 FGPDRSGFLSGFFTLVGTHGLHVTSGLIWMLVLMYQVAKRGLNDTNRTRIMCLSLFWHFL 187 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVF+ VYLMGV+ Sbjct: 188 DVVWICVFTIVYLMGVM 204 >gi|317047168|ref|YP_004114816.1| cytochrome o ubiquinol oxidase subunit III [Pantoea sp. At-9b] gi|316948785|gb|ADU68260.1| cytochrome o ubiquinol oxidase, subunit III [Pantoea sp. At-9b] Length = 205 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 98/198 (49%), Positives = 126/198 (63%), Gaps = 1/198 (0%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + GFWIYLMSDC++FA F TYAV+ N A GPA D+F++ Sbjct: 9 HHHDAHAEHGHHDAGANKIFGFWIYLMSDCIIFATLFATYAVMVNNTAGGPAGKDIFELP 68 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + V T +LLLSS++ A++A + +SWL +T FG FI MEIYEF HLI Sbjct: 69 FVLVETALLLLSSITYGMAVIA-MNNQNKGAVISWLALTFLFGAGFIGMEIYEFHHLIME 127 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS FF LVG HGLHV GLIW+ VL+ QI K+GL + N+ R++CLS+FWHF Sbjct: 128 GFGPNRSGFLSGFFTLVGTHGLHVTSGLIWMAVLMFQISKRGLSATNRTRIMCLSLFWHF 187 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYLMG + Sbjct: 188 LDVVWICVFTIVYLMGAM 205 >gi|300311777|ref|YP_003775869.1| cytochrome o ubiquinol oxidase subunit III protein [Herbaspirillum seropedicae SmR1] gi|300074562|gb|ADJ63961.1| cytochrome o ubiquinol oxidase subunit III protein [Herbaspirillum seropedicae SmR1] Length = 208 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 111/195 (56%), Positives = 137/195 (70%), Gaps = 4/195 (2%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 Y +GT LGFWIYLMSDCL+FA F YAVLG+NYA GP ++FD+ + Sbjct: 17 YFVRHHHPE---NGTLLGFWIYLMSDCLIFACLFACYAVLGRNYAGGPTGAELFDLPLVA 73 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 ++T +LLLSS++ FAMLA K+ + T+ WL++T G FI E+YEF HLI A Sbjct: 74 LNTALLLLSSITYGFAMLAMQAKKQQN-TIFWLIITGLLGAGFIYFELYEFLHLIHEGAG 132 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FL+SFFALVG HGLHV FG+IWL VL+ QI K GL N RRL+CLSMFWHFLD+ Sbjct: 133 PTRSGFLTSFFALVGTHGLHVTFGIIWLVVLLFQINKHGLTEANGRRLMCLSMFWHFLDV 192 Query: 196 IWICVFSFVYLMGVV 210 +WI VF+FVYLMGV+ Sbjct: 193 VWIGVFTFVYLMGVL 207 >gi|209546367|ref|YP_002278257.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539224|gb|ACI59157.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 208 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 116/210 (55%), Positives = 146/210 (69%), Gaps = 5/210 (2%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS Q I S FY+ + + T LGFW+YLMSDCL+FAV F T+ VLG+NYA Sbjct: 3 MSDQTIDTSEKPE-FYLTEDHHPE---NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 58 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGP+P D+FD+ + ++T +LLLSS++ FAML +T+ WL VT FG FI Sbjct: 59 AGPSPADLFDLPIVALNTSMLLLSSITYGFAMLQMERNA-KAETLFWLAVTGLFGAAFIG 117 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GL N+ Sbjct: 118 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLAEANR 177 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VFSFVYL+GV+ Sbjct: 178 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVL 207 >gi|292487460|ref|YP_003530332.1| cytochrome o ubiquinol oxidase subunit III [Erwinia amylovora CFBP1430] gi|292898702|ref|YP_003538071.1| cytochrome O ubiquinol oxidase subunit III [Erwinia amylovora ATCC 49946] gi|291198550|emb|CBJ45658.1| cytochrome O ubiquinol oxidase subunit III [Erwinia amylovora ATCC 49946] gi|291552879|emb|CBA19924.1| cytochrome o ubiquinol oxidase subunit III [Erwinia amylovora CFBP1430] gi|312171564|emb|CBX79822.1| cytochrome o ubiquinol oxidase subunit III [Erwinia amylovora ATCC BAA-2158] Length = 204 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 97/197 (49%), Positives = 127/197 (64%), Gaps = 1/197 (0%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + GFWIYLMSDC++FA F TY V+ N A GPA D+F++ Sbjct: 9 HHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYGVMVNNTAGGPAGKDIFELPF 68 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + V T +LLLSS++ FA++ + K + WL +T FG+ FI MEIYEF HLI+ Sbjct: 69 VLVETALLLLSSITYGFAVI-NMNKGHKGAVIGWLALTFLFGLGFIGMEIYEFHHLIAEG 127 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 P RS FLS FF LVG HGLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFL Sbjct: 128 FGPDRSGFLSGFFTLVGTHGLHVTSGLIWMLVLMYQVAKRGLNDTNRTRIMCLSLFWHFL 187 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVF+ VYLMGV+ Sbjct: 188 DVVWICVFTIVYLMGVM 204 >gi|326317720|ref|YP_004235392.1| cytochrome o ubiquinol oxidase subunit III [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374556|gb|ADX46825.1| cytochrome o ubiquinol oxidase, subunit III [Acidovorax avenae subsp. avenae ATCC 19860] Length = 210 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 114/196 (58%), Positives = 145/196 (73%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 +++ ++ +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD+S + Sbjct: 19 YHLAEEPHPE---NGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLSLV 75 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T LLLSS++ FAML K + T+ WL VT FG+ F+ +E+YEF HLI A Sbjct: 76 AINTAFLLLSSITFGFAMLQ-KQKGNVGGTLGWLAVTGLFGLCFLGLELYEFHHLIHEGA 134 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLS+FF LVG HGLHV FGLIWL VL+IQI K GLI N+RRL+CLSMFWHFLD Sbjct: 135 GPQRSAFLSAFFTLVGTHGLHVTFGLIWLVVLMIQISKHGLIHENKRRLMCLSMFWHFLD 194 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VF+FVYLMGV+ Sbjct: 195 VVWIGVFTFVYLMGVL 210 >gi|120610895|ref|YP_970573.1| cytochrome c oxidase subunit III [Acidovorax citrulli AAC00-1] gi|120589359|gb|ABM32799.1| cytochrome bo3 quinol oxidase subunit 3 [Acidovorax citrulli AAC00-1] Length = 210 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 111/196 (56%), Positives = 144/196 (73%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 +++ ++ +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD++ + Sbjct: 19 YHLAEEPHPE---NGTALGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLV 75 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T LLLSS++ FAML + T+ WL +T FG+ F+ +E+YEF HLI A Sbjct: 76 AINTAFLLLSSITFGFAMLQKQKGNVR-GTLGWLAITGLFGLCFLGLELYEFHHLIHQGA 134 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLS+FF LVG HGLHV FGLIWL VL+IQI K GLI N+RRL+CLSMFWHFLD Sbjct: 135 GPQRSAFLSAFFTLVGTHGLHVTFGLIWLVVLMIQIGKHGLIHENKRRLMCLSMFWHFLD 194 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VF+FVYLMGV+ Sbjct: 195 VVWIGVFTFVYLMGVL 210 >gi|15887495|ref|NP_353176.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium tumefaciens str. C58] gi|15155018|gb|AAK85961.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium tumefaciens str. C58] Length = 208 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 115/198 (58%), Positives = 150/198 (75%), Gaps = 4/198 (2%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 +FY+K+ +GT +GFW+YLMSDCL+FAV F TYAVLG++YAAGP+ D+FD+ Sbjct: 15 PVFYLKEDHHPE---NGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAAGPSGADLFDLK 71 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + ++T LLLSS++ FAML +++ T+ WL +T FG+ F+ +E+YEF HLI Sbjct: 72 LVAINTGFLLLSSITYGFAMLEMEKQKVKS-TLIWLGITGLFGLAFLAVELYEFHHLIEE 130 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 A PQRSAFLS+FFALVG HGLHV FG IWL L++Q+ K GLI+ N+RRL+CLSMFWHF Sbjct: 131 GAGPQRSAFLSAFFALVGTHGLHVTFGTIWLVTLMVQVAKHGLIAANKRRLMCLSMFWHF 190 Query: 193 LDLIWICVFSFVYLMGVV 210 LD+IWI VFSFVYLMGV+ Sbjct: 191 LDVIWIGVFSFVYLMGVL 208 >gi|188534642|ref|YP_001908439.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia tasmaniensis Et1/99] gi|188029684|emb|CAO97563.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia tasmaniensis Et1/99] Length = 204 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 97/197 (49%), Positives = 128/197 (64%), Gaps = 1/197 (0%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + GFWIYLMSDC++FA F TY V+ N A GPA D+F++ Sbjct: 9 HHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATYGVMVNNTAGGPAGKDIFELPF 68 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + V T +LLLSS++ FA++ + K + WL +T FG+ FI MEIYEF HLI+ Sbjct: 69 VLVETALLLLSSITYGFAVI-NMNKGQKGAVIGWLAMTFLFGLGFIGMEIYEFHHLIAEG 127 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 P RS FLS+FF LVG HGLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFL Sbjct: 128 FGPDRSGFLSAFFTLVGTHGLHVTSGLIWMLVLMYQVAKRGLSDSNRTRIMCLSLFWHFL 187 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVF+ VYLMGV+ Sbjct: 188 DVVWICVFTIVYLMGVM 204 >gi|134095868|ref|YP_001100943.1| cytochrome o ubiquinol oxidase subunit III [Herminiimonas arsenicoxydans] gi|133739771|emb|CAL62822.1| Cytochrome o ubiquinol oxidase subunit 3 (Cytochrome o ubiquinol oxidase subunit III) [Herminiimonas arsenicoxydans] Length = 214 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 109/207 (52%), Positives = 142/207 (68%), Gaps = 5/207 (2%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 + + + +YVK+ T LGFWIYLMSDCL+FA F TYAVLG++YA GP Sbjct: 12 SAMSSADASTRYYVKEHHPE----SSTSLGFWIYLMSDCLIFACLFATYAVLGRSYAGGP 67 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 ++FD+ + ++T LL+SS++ AML + R+ T+ WL +T G F+ +E+ Sbjct: 68 TGAELFDLPLVAMNTAFLLVSSITYGVAMLEAHRNRVRS-TLIWLAITGMLGAGFLALEL 126 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEF HLI A PQ SAFL+SFFALVG HGLHV FG+IWL VL+ Q+ K GL N+RRL Sbjct: 127 YEFNHLIHEGAGPQTSAFLTSFFALVGTHGLHVTFGIIWLIVLMFQVGKFGLNVENKRRL 186 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD+IWI VF+FVYLMGV+ Sbjct: 187 MCLSMFWHFLDVIWIGVFTFVYLMGVL 213 >gi|50120080|ref|YP_049247.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium atrosepticum SCRI1043] gi|49610606|emb|CAG74051.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium atrosepticum SCRI1043] Length = 204 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFW+YLMSD ++F F TYAVL A GP+ D+F + + V Sbjct: 12 AHAEHGHHDTGANKVFGFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKDIFQLPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL VT FG++FI MEIYEF HLI P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNTWLGVTFLFGLVFIGMEIYEFHHLIVEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HGLHV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGLHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+G + Sbjct: 191 WICVFTVVYLLGAI 204 >gi|149926919|ref|ZP_01915178.1| cytochrome o ubiquinol oxidase, subunit III [Limnobacter sp. MED105] gi|149824471|gb|EDM83689.1| cytochrome o ubiquinol oxidase, subunit III [Limnobacter sp. MED105] Length = 207 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 110/210 (52%), Positives = 145/210 (69%), Gaps = 4/210 (1%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS + + S Y +G+ LGFWIYLMSDCL+FA F TYAV+G+NYA Sbjct: 1 MSDLTMNAPTDPSARYYVKDHHPK---NGSSLGFWIYLMSDCLIFACLFATYAVIGRNYA 57 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP ++FD++ + ++T LLLSS++ A + R + KT+ WL +T G+ F+ Sbjct: 58 GGPTGAEIFDLNLVALNTAFLLLSSITYGVA-MVGMQNRNVKKTIQWLAITGVLGLAFLA 116 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +EIYEF H IS+ A PQ S FL++FFALVG HGLHVFFG+IWL VL+ Q+ K GLI N+ Sbjct: 117 VEIYEFWHFISIGATPQTSGFLTAFFALVGTHGLHVFFGIIWLVVLLFQLKKHGLIVENR 176 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RR++CLSMFWHFLD+IWI VF+FVYLMGV+ Sbjct: 177 RRVMCLSMFWHFLDVIWIGVFTFVYLMGVL 206 >gi|261822514|ref|YP_003260620.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium wasabiae WPP163] gi|261606527|gb|ACX89013.1| cytochrome o ubiquinol oxidase, subunit III [Pectobacterium wasabiae WPP163] Length = 204 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFW+YLMSD ++F F TYAVL A GP+ D+F + + V Sbjct: 12 AHAEHGHHDTGANKVFGFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKDIFQLPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL VT FG++FI MEIYEF HLI P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNTWLGVTFLFGLVFIGMEIYEFHHLIVEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HGLHV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGLHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+G + Sbjct: 191 WICVFTVVYLLGAI 204 >gi|16126015|ref|NP_420579.1| ubiquinol oxidase subunit III [Caulobacter crescentus CB15] gi|221234786|ref|YP_002517222.1| quinol cytochrome oxidase polypeptide III [Caulobacter crescentus NA1000] gi|13423197|gb|AAK23747.1| ubiquinol oxidase subunit III [Caulobacter crescentus CB15] gi|220963958|gb|ACL95314.1| quinol cytochrome oxidase polypeptide III [Caulobacter crescentus NA1000] Length = 208 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 111/209 (53%), Positives = 150/209 (71%), Gaps = 4/209 (1%) Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61 + + + + FY+ + +GT LGFWIYLMSDCL+FAV F YAVLG++YAA Sbjct: 3 AHSQAVSAADTDQFYLTKEHHPE---NGTLLGFWIYLMSDCLIFAVLFACYAVLGQSYAA 59 Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121 GP+ D+FD+ + ++T +LLLSS++ FAM+A+ + + + WL VT G+ F+ + Sbjct: 60 GPSGADLFDLKLVAINTGLLLLSSITYGFAMIAAQAREVRP-VLIWLGVTGLLGVGFLSL 118 Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181 EIYEFAHLI A PQRSAFLS+FF LVG HGLHV FG+IWL L++Q+ ++GL +R Sbjct: 119 EIYEFAHLIHEGATPQRSAFLSAFFLLVGTHGLHVTFGVIWLVTLMVQVAQRGLGIEMRR 178 Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RL+CLSMFWHFLD+IWI VFSFVYL+GV+ Sbjct: 179 RLMCLSMFWHFLDVIWIGVFSFVYLLGVL 207 >gi|253687436|ref|YP_003016626.1| cytochrome o ubiquinol oxidase, subunit III [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754014|gb|ACT12090.1| cytochrome o ubiquinol oxidase, subunit III [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 204 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFW+YLMSD ++F F TYAVL A GP+ D+F + + V Sbjct: 12 AHAEHGHHDTGANKVFGFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKDIFQLPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL VT FG++FI MEIYEF HLI P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNAWLGVTFLFGLVFIGMEIYEFHHLIVEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HGLHV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGLHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+G + Sbjct: 191 WICVFTVVYLLGAI 204 >gi|62289031|ref|YP_220824.1| ubiquinol oxidase subunit III [Brucella abortus bv. 1 str. 9-941] gi|82698968|ref|YP_413542.1| cytochrome c oxidase subunit III [Brucella melitensis biovar Abortus 2308] gi|189023306|ref|YP_001934074.1| Cytochrome c oxidase, subunit III [Brucella abortus S19] gi|237814518|ref|ZP_04593516.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus str. 2308 A] gi|254696474|ref|ZP_05158302.1| Cytochrome c oxidase, subunit III [Brucella abortus bv. 2 str. 86/8/59] gi|254731386|ref|ZP_05189964.1| Cytochrome c oxidase, subunit III [Brucella abortus bv. 4 str. 292] gi|260546325|ref|ZP_05822065.1| cytochrome c oxidase [Brucella abortus NCTC 8038] gi|260759124|ref|ZP_05871472.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 4 str. 292] gi|260760849|ref|ZP_05873192.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 2 str. 86/8/59] gi|62195163|gb|AAX73463.1| ubiquinol oxidase subunit III [Brucella abortus bv. 1 str. 9-941] gi|82615069|emb|CAJ09997.1| Cytochrome c oxidase, subunit III [Brucella melitensis biovar Abortus 2308] gi|189018878|gb|ACD71600.1| Cytochrome c oxidase, subunit III [Brucella abortus S19] gi|237789355|gb|EEP63565.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus str. 2308 A] gi|260096432|gb|EEW80308.1| cytochrome c oxidase [Brucella abortus NCTC 8038] gi|260669442|gb|EEX56382.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 4 str. 292] gi|260671281|gb|EEX58102.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 2 str. 86/8/59] Length = 209 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 1/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS + +P ++ T +GFWIYLMSDC++F+ F TYAVL +A Sbjct: 1 MSAIQHTAAPYLGRNDHPAHEDHHDAGSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFA 60 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP ++FD+ + V T++LL+SSL+ A L+ K + WL VT G F+ Sbjct: 61 GGPTGRELFDLQFVLVETMLLLVSSLTYGLATLS-MYKNNRSGVLGWLGVTFLLGAAFLA 119 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 MEIYEF HLI A P RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ Sbjct: 120 MEIYEFHHLIVEGAGPDRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNR 179 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 R++CLS+FWHFLD+IWI VF+ VYL+GV+ Sbjct: 180 TRVMCLSLFWHFLDIIWIGVFTLVYLLGVL 209 >gi|86360306|ref|YP_472194.1| cytochrome O ubiquinol oxidase, subunit III protein [Rhizobium etli CFN 42] gi|86284408|gb|ABC93467.1| cytochrome O ubiquinol oxidase, subunit III protein [Rhizobium etli CFN 42] Length = 206 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 116/210 (55%), Positives = 147/210 (70%), Gaps = 5/210 (2%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS Q I ++ FY+ + T LGFW+YLMSDCL+FAV F T+ VLG+NYA Sbjct: 1 MSDQTIDRAEKPE-FYLTEDHHPEG---STNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 56 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGP+P D+FD+ + ++T +LLLSS++ FAML +T+ WL VT FG FI Sbjct: 57 AGPSPADLFDLPIVALNTSMLLLSSITYGFAMLQMERNA-KAETLFWLAVTGLFGAAFIG 115 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GL+ N+ Sbjct: 116 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLVEANR 175 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VFSFVYL+GVV Sbjct: 176 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVV 205 >gi|218532590|ref|YP_002423406.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium chloromethanicum CM4] gi|218524893|gb|ACK85478.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium chloromethanicum CM4] Length = 215 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 116/191 (60%), Positives = 141/191 (73%), Gaps = 4/191 (2%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + GT LGFWIYLMSDCL+FAV F TYAVLG++YAAGP+P D+FD+ + V+T Sbjct: 28 EHHPEG---GTMLGFWIYLMSDCLIFAVLFATYAVLGRSYAAGPSPKDLFDLPIVAVNTS 84 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FAMLA + KT WL +T FG F+ +E+YEFAHLI A PQRS Sbjct: 85 MLLFSSITYGFAMLAMEKDD-LAKTQLWLAITGLFGAAFVGLELYEFAHLIHEGATPQRS 143 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 FLS+FF LVG HGLHV FGLIWL L+IQ KGL+ N+RRL+CLSMFWHFLD+IWI Sbjct: 144 GFLSAFFTLVGTHGLHVTFGLIWLVTLMIQTRLKGLVVENKRRLMCLSMFWHFLDVIWIG 203 Query: 200 VFSFVYLMGVV 210 VF+FVYLMGV+ Sbjct: 204 VFTFVYLMGVL 214 >gi|313756954|gb|ADR78285.1| chimeric cytochrome c oxidase subunit III [synthetic construct] Length = 386 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 79/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + G G +++ S+ + T + G G P++ Sbjct: 192 TYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLN 251 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VL S S ++A + ++ + LL+T G+ F +++ E+ Sbjct: 252 PLEVP--LLNTSVLAASYYSYTWAHHSLMENN-RNQMIQALLITILLGLYFTLLQASEY- 307 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HG+HV G +L I+ L S + + Sbjct: 308 --FESPFTISDGIYGSTFFMTTGFHGMHVIIGSTYLTACFIRQLMFHFTSKHHFGFEAAA 365 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 366 WYWHFVDVVWLFLYVSIYWWG 386 >gi|86747366|ref|YP_483862.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2] gi|86570394|gb|ABD04951.1| Cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2] Length = 209 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 114/210 (54%), Positives = 150/210 (71%), Gaps = 2/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS +F+V D+ + T LGFWIYLMSDCL+FA+ F TY VLG NYA Sbjct: 1 MSVVAAAPQAAEPVFHVVDEHAHP-EGASTMLGFWIYLMSDCLIFAILFATYGVLGANYA 59 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGPAP D+FD+ + V+T +LL+SS++ FAML ++ + T++WL VT FG+ F+ Sbjct: 60 AGPAPKDLFDLKLVAVNTAMLLMSSITYGFAMLTMEKRQ-VGATLAWLGVTGLFGLAFLG 118 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF H+I A PQRSAFLSSFF LVG HGLHV FG+IWL L++Q+ + GLI N+ Sbjct: 119 IELYEFHHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIIWLVTLMVQVARAGLIEANR 178 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VF+FVYL+G + Sbjct: 179 RRLMCLSMFWHFLDVVWIGVFTFVYLLGTL 208 >gi|241667023|ref|YP_002985107.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862480|gb|ACS60145.1| cytochrome o ubiquinol oxidase, subunit III [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 208 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 146/210 (69%), Gaps = 5/210 (2%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS Q I + FY+ + + T LGFW+YLMSDCL+FAV F T+ VLG+NYA Sbjct: 3 MSDQTIDTAEKPE-FYLTEDHHPE---NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 58 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGP+P D+FD+ + ++T +LL SS++ FAML +T+ WL VT FG FI Sbjct: 59 AGPSPADLFDLPIVALNTSMLLFSSITYGFAMLQMERNA-KAETLFWLGVTGLFGAAFIG 117 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+ Sbjct: 118 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 177 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VFSFVYL+GV+ Sbjct: 178 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVL 207 >gi|188584038|ref|YP_001927483.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium populi BJ001] gi|179347536|gb|ACB82948.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium populi BJ001] Length = 215 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 115/191 (60%), Positives = 140/191 (73%), Gaps = 4/191 (2%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + T LGFWIYLMSDCL+FAV F TYAVLG++YAAGP+P D+FD+ + V+T Sbjct: 28 EHHPEG---STMLGFWIYLMSDCLIFAVLFATYAVLGRSYAAGPSPKDLFDLPIVAVNTS 84 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FAMLA L KT WL VT FG F+ +E++EF+HLI A PQRS Sbjct: 85 MLLFSSITYGFAMLAMEKDDLS-KTQLWLAVTGLFGAAFVGLELWEFSHLIHEGATPQRS 143 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 FLS+FF LVG HGLHV FGLIWL L++Q KGLI N+RRL+CLSMFWHFLD+IWI Sbjct: 144 GFLSAFFTLVGTHGLHVTFGLIWLVTLMVQTRWKGLIPENKRRLMCLSMFWHFLDVIWIG 203 Query: 200 VFSFVYLMGVV 210 VF+FVYLMGV+ Sbjct: 204 VFTFVYLMGVL 214 >gi|121595098|ref|YP_986994.1| cytochrome c oxidase subunit III [Acidovorax sp. JS42] gi|120607178|gb|ABM42918.1| cytochrome bo3 quinol oxidase subunit 3 [Acidovorax sp. JS42] Length = 211 Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 109/193 (56%), Positives = 138/193 (71%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 +GT LGFW+YLMSDCL+FA F TY VLG++YAAGP +FD++ + ++ Sbjct: 20 YHLAHEPHPENGTSLGFWLYLMSDCLIFAALFATYGVLGRSYAAGPTGAQLFDLTLVAIN 79 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LL SS++ FAML + T++WL VT G+ F+ +E+YEFAH+I + A PQ Sbjct: 80 TAFLLTSSITFGFAMLQKQAGNVR-GTLTWLAVTGLLGLAFLGVELYEFAHMIHLGATPQ 138 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG HGLHV FGLIWL L++QI K GLI N+RRL CLSMFWHFLD++W Sbjct: 139 RSAFLSSFFTLVGTHGLHVTFGLIWLVTLMLQISKHGLIHENKRRLNCLSMFWHFLDVVW 198 Query: 198 ICVFSFVYLMGVV 210 I VF+FVYLMGV+ Sbjct: 199 IGVFTFVYLMGVL 211 >gi|73540687|ref|YP_295207.1| transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase protein [Ralstonia eutropha JMP134] gi|72118100|gb|AAZ60363.1| probable transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase protein [Ralstonia eutropha JMP134] Length = 217 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 4/210 (1%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 + G + + + D+ HD T GFW+YLMSDC++FA F +AVL A Sbjct: 9 DRFGAAQAPAHAHSHDETHDHAHHDTSENTIFGFWLYLMSDCILFACLFAAFAVLRGEVA 68 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP+ ++F+++ + V T +LL SS++ FAM++ R + + WL +T G F+ Sbjct: 69 GGPSAKELFELNYVLVETFILLFSSITYGFAMISMQ-NRSKGRVLVWLGITFLLGAAFMY 127 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 MEI EF HLI+ A P RSAFLSSFF LVG HGLHV G++W+ VL+ Q+ KKGL Sbjct: 128 MEINEFHHLIAEGAGPSRSAFLSSFFTLVGTHGLHVASGMVWMLVLMWQVSKKGLTPTMS 187 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 +RL CLS+FWHFLD++WI VF+ VYLMG + Sbjct: 188 KRLNCLSLFWHFLDVVWIGVFTVVYLMGAM 217 >gi|222084385|ref|YP_002542914.1| cytochrome o ubiquinol oxidase, subunit III [Agrobacterium radiobacter K84] gi|221721833|gb|ACM24989.1| cytochrome o ubiquinol oxidase, subunit III [Agrobacterium radiobacter K84] Length = 209 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 112/196 (57%), Positives = 142/196 (72%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 FY+ ++ T LGFWIY+MSDCL+FAV F TYAVLG NYAAGP+P D+F++ + Sbjct: 17 FYLTEEHHPEG---STMLGFWIYIMSDCLIFAVLFATYAVLGHNYAAGPSPADLFELPLV 73 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T +LL SS++ FAMLA T+ WL +T FG FI E+YEF HLI A Sbjct: 74 ALNTAMLLFSSITYGFAMLAMEKGN-KSGTMMWLAITGLFGAAFIYFELYEFYHLILEGA 132 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLS+FFALVG HGLHV G++WL L++Q+ + GLI N+RRL+CLSMFWHFLD Sbjct: 133 GPQRSAFLSAFFALVGTHGLHVTVGIVWLITLMVQVSQHGLIPENKRRLMCLSMFWHFLD 192 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VFSFVYLMGV+ Sbjct: 193 VVWIGVFSFVYLMGVL 208 >gi|150376511|ref|YP_001313107.1| cytochrome o ubiquinol oxidase subunit III [Sinorhizobium medicae WSM419] gi|150031058|gb|ABR63174.1| Cytochrome o ubiquinol oxidase subunit III [Sinorhizobium medicae WSM419] Length = 210 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 119/196 (60%), Positives = 152/196 (77%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 FY+K++ T LGFW+YLMSDCL+FAV F T+AVLG+NYAAGP+P D+FD+ I Sbjct: 18 FYLKEEHHPEG---STMLGFWLYLMSDCLIFAVLFATHAVLGRNYAAGPSPADLFDLPLI 74 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T +LL SS++ FAML RL T++W+ VTA FG++F+ +E+YEFAHLI A Sbjct: 75 ALNTSMLLFSSITYGFAMLEMEKGRLR-ATLAWMAVTALFGIVFVGLELYEFAHLIHEGA 133 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLSSFF LVG HGLHV G+IW+FVL+ Q+ K GLI+ N+RRL+CLSMFWHFLD Sbjct: 134 GPQRSAFLSSFFTLVGTHGLHVSSGIIWMFVLMAQVAKHGLIAENKRRLMCLSMFWHFLD 193 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VFSFVYLMGV+ Sbjct: 194 VVWIGVFSFVYLMGVL 209 >gi|325291582|ref|YP_004277446.1| cytochrome ubiquinol oxidase subunit III [Agrobacterium sp. H13-3] gi|325059435|gb|ADY63126.1| cytochrome ubiquinol oxidase subunit III [Agrobacterium sp. H13-3] Length = 208 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 114/198 (57%), Positives = 148/198 (74%), Gaps = 4/198 (2%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 +FY+K+ +GT LGFW+YLMSDCL+FA F TYAV+G+NYAAGP+ D+FD+ Sbjct: 15 PVFYLKEDHHPE---NGTSLGFWLYLMSDCLIFATLFATYAVVGRNYAAGPSGADLFDLK 71 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + ++T LL SS++ FAML +++ T+ WL +T FG+ F+ +E+YEF HLI Sbjct: 72 LVAINTAFLLFSSITYGFAMLEMEKQKVKT-TLIWLGITGLFGLAFLAVELYEFHHLIEE 130 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 A PQRSAFLS+FFALVG HGLHV FG+IWL L+ Q+ K GLI+ N+RRL+CLSMFWHF Sbjct: 131 GAGPQRSAFLSAFFALVGTHGLHVTFGVIWLVTLMFQVAKHGLIAANKRRLMCLSMFWHF 190 Query: 193 LDLIWICVFSFVYLMGVV 210 LD+IWI VFSFVYLMGV+ Sbjct: 191 LDVIWIGVFSFVYLMGVL 208 >gi|167461105|ref|ZP_02326194.1| cytochrome caa3 oxidase subunit III CoxC [Paenibacillus larvae subsp. larvae BRL-230010] Length = 318 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ LGFW++L + ++F F TY L + G ++F + I ++T Sbjct: 127 EPEKATLEGKNKVLGFWLFLGGETVLFGCLFATYLALRNSVGDGKTSDELFQLPMIALAT 186 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 +LL SSL+ FA++A R + + WL ++ G+ F+ +EIYEF + Sbjct: 187 FLLLTSSLTSVFAVMALHRHR-LQSMLRWLAISVVLGLAFLGLEIYEFVEYVHEGHGFTT 245 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF +SF++LVG HG HV FG++W+ +L+IQ KKGL + + +++WHF+D++W+ Sbjct: 246 SAFSTSFYSLVGFHGAHVLFGILWISLLIIQGSKKGLTTVTAPKFYIAALYWHFIDVVWV 305 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG V Sbjct: 306 FIFTVVYLMGKV 317 >gi|317492922|ref|ZP_07951346.1| cytochrome o ubiquinol oxidase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919044|gb|EFV40379.1| cytochrome o ubiquinol oxidase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 206 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 99/194 (51%), Positives = 130/194 (67%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + D GFW+YLMSDC++FA F TYAVL A GP+ D+F++ + V Sbjct: 14 AHAEHGHHDAGDTKVFGFWVYLMSDCILFASLFATYAVLVNGTADGPSGKDIFELPFVLV 73 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ FAMLA K + +WL +T FG FI MEIYEF HLI+ P Sbjct: 74 ETFLLLFSSITYGFAMLA-MNKGKVASVNTWLGLTFLFGAGFIAMEIYEFHHLIAEGFGP 132 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 +SAFLS+FF LVG HG+HV GLIW+ V++IQ+ KKGL + N+ RL+CLS+FWHFLD++ Sbjct: 133 DKSAFLSAFFTLVGTHGIHVTSGLIWIIVMMIQVGKKGLTARNRTRLMCLSLFWHFLDVV 192 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 193 WICVFTVVYLMGAM 206 >gi|319783411|ref|YP_004142887.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169299|gb|ADV12837.1| cytochrome o ubiquinol oxidase, subunit III [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 208 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 114/198 (57%), Positives = 147/198 (74%), Gaps = 1/198 (0%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 ++F+++D T LGFWIYLMSDCL+FA+ F Y VLG NYAAGPAP D+FD+ Sbjct: 11 TIFHLEDDHGHAESGSSTMLGFWIYLMSDCLIFAMLFAVYGVLGGNYAAGPAPKDLFDLP 70 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + ++T +LLLSS++ FAML A R+ WL++T FG+ F+ +E+YEFAH I Sbjct: 71 LVALNTTMLLLSSITYGFAMLEMAKGRVRP-MQVWLVITGLFGLAFLGIELYEFAHFIHE 129 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 A PQRS FLSSFF LVG HGLHV FGL+WL VL++Q+ + GLI+ NQRRL+CLSMFWHF Sbjct: 130 GATPQRSGFLSSFFTLVGTHGLHVTFGLVWLVVLMVQVSRHGLIAANQRRLMCLSMFWHF 189 Query: 193 LDLIWICVFSFVYLMGVV 210 LD+IWI VF+FVYLMG++ Sbjct: 190 LDVIWIGVFTFVYLMGML 207 >gi|307293186|ref|ZP_07573032.1| cytochrome o ubiquinol oxidase, subunit III [Sphingobium chlorophenolicum L-1] gi|306881252|gb|EFN12468.1| cytochrome o ubiquinol oxidase, subunit III [Sphingobium chlorophenolicum L-1] Length = 207 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 113/196 (57%), Positives = 144/196 (73%), Gaps = 2/196 (1%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 +++ ++ + T LGFW+YLMSDCL+FA+ F TYAVLG +YA GP P D+FD+ I Sbjct: 13 YHLPEEPH-LHEGHSTNLGFWMYLMSDCLIFAILFATYAVLGGSYAGGPGPKDLFDLPLI 71 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T +LL SS++ FAMLA R + T WL VT FG F+ +E+YEF+HLI A Sbjct: 72 ALNTAMLLFSSITYGFAMLAMEKNR-VSATQGWLFVTLLFGGAFLCIELYEFSHLIHEGA 130 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLSSFF LVG HGLHV FG +WL L++Q+ KKGLI N+RRL+CLSMFWHFLD Sbjct: 131 GPQRSAFLSSFFTLVGTHGLHVTFGSVWLITLMVQVAKKGLIPANKRRLMCLSMFWHFLD 190 Query: 195 LIWICVFSFVYLMGVV 210 +IWI VF+FVYLMGV+ Sbjct: 191 VIWIGVFTFVYLMGVL 206 >gi|254563669|ref|YP_003070764.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium extorquens DM4] gi|254270947|emb|CAX26952.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium extorquens DM4] Length = 215 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 115/191 (60%), Positives = 140/191 (73%), Gaps = 4/191 (2%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + GT LGFWIYLMSDCL+FAV F TYAVLG++YAAGP+P D+FD+ + V+T Sbjct: 28 EHHPEG---GTMLGFWIYLMSDCLIFAVLFATYAVLGRSYAAGPSPKDLFDLPIVAVNTS 84 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FAMLA + KT WL +T FG F+ +E+YEFAHLI A PQRS Sbjct: 85 MLLFSSITYGFAMLAMEKDD-LAKTQLWLAITGLFGAAFVGLELYEFAHLIHEGATPQRS 143 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 FLS+FF LVG HGLHV FGLIWL L+IQ KGL+ N+ RL+CLSMFWHFLD+IWI Sbjct: 144 GFLSAFFTLVGTHGLHVTFGLIWLVTLMIQTRLKGLVVENKLRLMCLSMFWHFLDVIWIG 203 Query: 200 VFSFVYLMGVV 210 VF+FVYLMGV+ Sbjct: 204 VFTFVYLMGVL 214 >gi|23500959|ref|NP_697086.1| ubiquinol oxidase subunit III [Brucella suis 1330] gi|161618034|ref|YP_001591921.1| cytochrome o ubiquinol oxidase, subunit III [Brucella canis ATCC 23365] gi|163842320|ref|YP_001626724.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis ATCC 23445] gi|225851587|ref|YP_002731820.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis ATCC 23457] gi|254690356|ref|ZP_05153610.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 6 str. 870] gi|254694845|ref|ZP_05156673.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 3 str. Tulya] gi|254700859|ref|ZP_05162687.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis bv. 5 str. 513] gi|254705225|ref|ZP_05167053.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis bv. 3 str. 686] gi|254707256|ref|ZP_05169084.1| cytochrome o ubiquinol oxidase, subunit III [Brucella pinnipedialis M163/99/10] gi|254709203|ref|ZP_05171014.1| cytochrome o ubiquinol oxidase, subunit III [Brucella pinnipedialis B2/94] gi|254713372|ref|ZP_05175183.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti M644/93/1] gi|254716270|ref|ZP_05178081.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti M13/05/1] gi|254718264|ref|ZP_05180075.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. 83/13] gi|256030727|ref|ZP_05444341.1| cytochrome o ubiquinol oxidase, subunit III [Brucella pinnipedialis M292/94/1] gi|256060187|ref|ZP_05450367.1| cytochrome o ubiquinol oxidase, subunit III [Brucella neotomae 5K33] gi|256112551|ref|ZP_05453472.1| cytochrome o ubiquinol oxidase, subunit III [Brucella melitensis bv. 3 str. Ether] gi|256158734|ref|ZP_05456609.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti M490/95/1] gi|256254131|ref|ZP_05459667.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ceti B1/94] gi|256258610|ref|ZP_05464146.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 9 str. C68] gi|256264902|ref|ZP_05467434.1| cytochrome c oxidase [Brucella melitensis bv. 2 str. 63/9] gi|256368510|ref|YP_003106016.1| cytochrome o ubiquinol oxidase subunit III [Brucella microti CCM 4915] gi|260169630|ref|ZP_05756441.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. F5/99] gi|260567308|ref|ZP_05837778.1| cytochrome c oxidase [Brucella suis bv. 4 str. 40] gi|260755900|ref|ZP_05868248.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 6 str. 870] gi|260884924|ref|ZP_05896538.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 9 str. C68] gi|261215175|ref|ZP_05929456.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 3 str. Tulya] gi|261218047|ref|ZP_05932328.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M13/05/1] gi|261221274|ref|ZP_05935555.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti B1/94] gi|261314738|ref|ZP_05953935.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis M163/99/10] gi|261316704|ref|ZP_05955901.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis B2/94] gi|261321103|ref|ZP_05960300.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M644/93/1] gi|261324164|ref|ZP_05963361.1| cytochrome o ubiquinol oxidase subunit III [Brucella neotomae 5K33] gi|261751369|ref|ZP_05995078.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 5 str. 513] gi|261755934|ref|ZP_05999643.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 3 str. 686] gi|261759160|ref|ZP_06002869.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. F5/99] gi|265983225|ref|ZP_06095960.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. 83/13] gi|265987774|ref|ZP_06100331.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis M292/94/1] gi|265993991|ref|ZP_06106548.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv. 3 str. Ether] gi|265997235|ref|ZP_06109792.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M490/95/1] gi|294851453|ref|ZP_06792126.1| cytochrome o ubiquinol oxidase [Brucella sp. NVSL 07-0026] gi|297247449|ref|ZP_06931167.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 5 str. B3196] gi|306840007|ref|ZP_07472801.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. NF 2653] gi|306843644|ref|ZP_07476245.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO1] gi|23346816|gb|AAN29001.1| ubiquinol oxidase subunit III [Brucella suis 1330] gi|161334845|gb|ABX61150.1| cytochrome o ubiquinol oxidase, subunit III [Brucella canis ATCC 23365] gi|163673043|gb|ABY37154.1| cytochrome o ubiquinol oxidase, subunit III [Brucella suis ATCC 23445] gi|225639952|gb|ACN99865.1| cytochrome o ubiquinol oxidase, subunit III [Brucella melitensis ATCC 23457] gi|255998668|gb|ACU47067.1| cytochrome o ubiquinol oxidase subunit III [Brucella microti CCM 4915] gi|260156826|gb|EEW91906.1| cytochrome c oxidase [Brucella suis bv. 4 str. 40] gi|260676008|gb|EEX62829.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 6 str. 870] gi|260874452|gb|EEX81521.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 9 str. C68] gi|260916782|gb|EEX83643.1| cytochrome o ubiquinol oxidase subunit III [Brucella abortus bv. 3 str. Tulya] gi|260919858|gb|EEX86511.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti B1/94] gi|260923136|gb|EEX89704.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M13/05/1] gi|261293793|gb|EEX97289.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M644/93/1] gi|261295927|gb|EEX99423.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis B2/94] gi|261300144|gb|EEY03641.1| cytochrome o ubiquinol oxidase subunit III [Brucella neotomae 5K33] gi|261303764|gb|EEY07261.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis M163/99/10] gi|261739144|gb|EEY27140.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. F5/99] gi|261741122|gb|EEY29048.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 5 str. 513] gi|261745687|gb|EEY33613.1| cytochrome o ubiquinol oxidase subunit III [Brucella suis bv. 3 str. 686] gi|262551703|gb|EEZ07693.1| cytochrome o ubiquinol oxidase subunit III [Brucella ceti M490/95/1] gi|262764972|gb|EEZ10893.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv. 3 str. Ether] gi|263095387|gb|EEZ18988.1| cytochrome c oxidase [Brucella melitensis bv. 2 str. 63/9] gi|264659971|gb|EEZ30232.1| cytochrome o ubiquinol oxidase subunit III [Brucella pinnipedialis M292/94/1] gi|264661817|gb|EEZ32078.1| cytochrome o ubiquinol oxidase subunit III [Brucella sp. 83/13] gi|294820042|gb|EFG37041.1| cytochrome o ubiquinol oxidase [Brucella sp. NVSL 07-0026] gi|297174618|gb|EFH33965.1| cytochrome o ubiquinol oxidase, subunit III [Brucella abortus bv. 5 str. B3196] gi|306276335|gb|EFM58035.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO1] gi|306404971|gb|EFM61256.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. NF 2653] gi|326408056|gb|ADZ65121.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis M28] gi|326537772|gb|ADZ85987.1| cytochrome o ubiquinol oxidase, subunit III [Brucella melitensis M5-90] Length = 209 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 3/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ + V Sbjct: 19 AHEDHHDA--GSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFVLV 76 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T++LL+SSL+ A L+ K + WL VT G F+ MEIYEF HLI A P Sbjct: 77 ETMLLLVSSLTYGLATLS-MYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGAGP 135 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD+I Sbjct: 136 DRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLDII 195 Query: 197 WICVFSFVYLMGVV 210 WI VF+ VYL+GV+ Sbjct: 196 WIGVFTLVYLLGVL 209 >gi|306842663|ref|ZP_07475308.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO2] gi|306287198|gb|EFM58695.1| cytochrome o ubiquinol oxidase, subunit III [Brucella sp. BO2] Length = 209 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 3/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ + V Sbjct: 19 AHEDHHDA--GSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFVLV 76 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T++LL+SSL+ A L+ K + WL VT G F+ MEIYEF HLI A P Sbjct: 77 ETMLLLVSSLTYGLATLS-MYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGAGP 135 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD+I Sbjct: 136 DRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLDII 195 Query: 197 WICVFSFVYLMGVV 210 WI VF+ VYL+GV+ Sbjct: 196 WIGVFTLVYLLGVL 209 >gi|227113458|ref|ZP_03827114.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 204 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFW+YLMSD ++F F TYAVL A GP+ ++F + + V Sbjct: 12 AHAEHGHHDTGATKVFGFWVYLMSDLIIFGSLFATYAVLVNGTAGGPSGKELFQLPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL VT FG++FI MEIYEF HLI P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNTWLGVTFLFGLVFIGMEIYEFHHLIVEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HG+HV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGIHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+G + Sbjct: 191 WICVFTVVYLLGAM 204 >gi|16759421|ref|NP_455038.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142807|ref|NP_806149.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414403|ref|YP_151478.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167551746|ref|ZP_02345499.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|213052104|ref|ZP_03344982.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425864|ref|ZP_03358614.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213584682|ref|ZP_03366508.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213621012|ref|ZP_03373795.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|25285521|pir||AD0557 cytochrome o ubiquinol oxidase chain III [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501712|emb|CAD08900.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi] gi|29138439|gb|AAO70009.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128660|gb|AAV78166.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|205323470|gb|EDZ11309.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 204 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 95/195 (48%), Positives = 127/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFW+YLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGQ-NKIFGFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A + +SWL +T FG FI MEIYEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIAMHKNN-KSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 IWICVF+ VYLMG + Sbjct: 190 IWICVFTVVYLMGAM 204 >gi|82542918|ref|YP_406865.1| cytochrome o ubiquinol oxidase subunit III [Shigella boydii Sb227] gi|187731346|ref|YP_001879140.1| cytochrome o ubiquinol oxidase subunit III [Shigella boydii CDC 3083-94] gi|81244329|gb|ABB65037.1| cytochrome o ubiquinol oxidase subunit III [Shigella boydii Sb227] gi|187428338|gb|ACD07612.1| cytochrome o ubiquinol oxidase, subunit III [Shigella boydii CDC 3083-94] gi|320186059|gb|EFW60804.1| Cytochrome O ubiquinol oxidase subunit III [Shigella flexneri CDC 796-83] Length = 204 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTCLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|116255240|ref|YP_771073.1| putative cytochrome o ubiquinol oxidase subunit III [Rhizobium leguminosarum bv. viciae 3841] gi|115259888|emb|CAK02982.1| putative cytochrome o ubiquinol oxidase subunit III [Rhizobium leguminosarum bv. viciae 3841] Length = 209 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 146/210 (69%), Gaps = 5/210 (2%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS Q I + FY+ + + T LGFW+YLMSDCL+FAV F T+ VLG+NYA Sbjct: 4 MSDQTIDTAEKPE-FYLTEDHHPE---NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 59 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGP+P D+FD+ + ++T +LL SS++ FAML +T+ WL VT FG FI Sbjct: 60 AGPSPADLFDLPIVALNTSMLLFSSITYGFAMLQMERNA-KAETLFWLGVTGLFGAAFIG 118 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+ Sbjct: 119 LELYEFVHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 178 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VFSFVYL+GV+ Sbjct: 179 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVL 208 >gi|227327521|ref|ZP_03831545.1| cytochrome o ubiquinol oxidase subunit III [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 204 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFW+YLMSD ++F F TYAVL A GP ++F + + V Sbjct: 12 AHAEHGHHDTGATKVFGFWVYLMSDLIIFGSLFATYAVLVNGTAGGPTGKELFQLPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL VT FG++FI MEIYEF HLI P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNAWLGVTFLFGLVFIGMEIYEFHHLIVEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HG+HV GLIWL +++IQ+ K+GL + N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGIHVTGGLIWLVIMMIQVSKRGLTATNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+G + Sbjct: 191 WICVFTVVYLLGAM 204 >gi|17988182|ref|NP_540816.1| cytochrome O ubiquinol oxidase subunit III [Brucella melitensis bv. 1 str. 16M] gi|256045834|ref|ZP_05448710.1| cytochrome O ubiquinol oxidase subunit III [Brucella melitensis bv. 1 str. Rev.1] gi|260563125|ref|ZP_05833611.1| cytochrome c oxidase [Brucella melitensis bv. 1 str. 16M] gi|265992248|ref|ZP_06104805.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv. 1 str. Rev.1] gi|17983943|gb|AAL53080.1| cytochrome o ubiquinol oxidase subunit iii [Brucella melitensis bv. 1 str. 16M] gi|260153141|gb|EEW88233.1| cytochrome c oxidase [Brucella melitensis bv. 1 str. 16M] gi|263003314|gb|EEZ15607.1| cytochrome o ubiquinol oxidase subunit III [Brucella melitensis bv. 1 str. Rev.1] Length = 209 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 3/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ + V Sbjct: 19 AHEDHHDA--GSTTLVGFWIYLMSDCILFSGLFATYAVLAHQFAGGPTGRELFDLQFVLV 76 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T++LL+SSL+ A L+ K + WL VT G F++MEIYEF HLI A P Sbjct: 77 ETMLLLVSSLTHGLATLS-MYKNNRSGVLGWLGVTFLLGAAFLVMEIYEFHHLIVEGAGP 135 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS+FLS+FF LVG HGLH+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD+I Sbjct: 136 DRSSFLSAFFTLVGTHGLHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLDII 195 Query: 197 WICVFSFVYLMGVV 210 WI VF+ VYL+GV+ Sbjct: 196 WIGVFTLVYLLGVL 209 >gi|239830889|ref|ZP_04679218.1| cytochrome o ubiquinol oxidase, subunit III [Ochrobactrum intermedium LMG 3301] gi|239823156|gb|EEQ94724.1| cytochrome o ubiquinol oxidase, subunit III [Ochrobactrum intermedium LMG 3301] Length = 209 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 1/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS +P ++ T +GFWIYLMSDC++F+ F TYAVL +A Sbjct: 1 MSASISTAAPFLGGNEHPAHEDHHDAGSTTLVGFWIYLMSDCVLFSGLFATYAVLAHQFA 60 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP ++FD++ + + T++LL+SSL+ A L+ K+ + WL +T G F+ Sbjct: 61 GGPTGRELFDLNFVLIETMLLLVSSLTYGLATLS-MFKKNRAGLLFWLGITFLLGAAFLA 119 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 ME+YEF HLI A P RSAFLS+FFALVG HGLH+ GLIW+ VL Q+L+ GL NQ Sbjct: 120 MEVYEFNHLIHEGAGPGRSAFLSAFFALVGTHGLHITSGLIWILVLSAQLLRDGLTEKNQ 179 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 R++CLS+FWHFLD+IWI VF+ VYL+GV+ Sbjct: 180 TRVMCLSLFWHFLDIIWIGVFTLVYLLGVL 209 >gi|13475708|ref|NP_107275.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium loti MAFF303099] gi|14026464|dbj|BAB53061.1| cytochrome o ubiquinol oxidase subunit III [Mesorhizobium loti MAFF303099] Length = 208 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 113/207 (54%), Positives = 147/207 (71%), Gaps = 5/207 (2%) Query: 4 QKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 G P F L +++ + T LGFW+YLMSDCL+FA+ F Y VLG NYAAGP Sbjct: 6 TTAGTEPVFHL----EEEHVHAEGSSTMLGFWLYLMSDCLIFAMLFAAYGVLGANYAAGP 61 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 AP D+FD+ + V+T +LLLSS++ FAML K + T +WL VT FG+ F+ +E+ Sbjct: 62 APKDLFDLDLVAVNTTMLLLSSITYGFAMLT-MDKGRVAATQAWLAVTGLFGLAFLSIEL 120 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEFAH+I A PQRSAFLSSFF LVG HGLHV FG++WL L+ Q+ + GLI N+RR+ Sbjct: 121 YEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMTQVARFGLIEANRRRV 180 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 +CLSMFWHFLD++WI VF+FVYLMG++ Sbjct: 181 MCLSMFWHFLDVVWIGVFTFVYLMGML 207 >gi|91975077|ref|YP_567736.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris BisB5] gi|91681533|gb|ABE37835.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris BisB5] Length = 209 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS +F+V D+ + T LGFW+YLMSDCL+FA+ F TY VLG NYA Sbjct: 1 MSVAVATPQTAEPVFHVVDEHAHP-EGASTMLGFWLYLMSDCLIFAILFATYGVLGANYA 59 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGPAP D+FD+ + V+T +LLLSS++ FAML A R + T WL +T FG+ F+ Sbjct: 60 AGPAPKDLFDLKLVAVNTAMLLLSSITYGFAMLEMARAR-VGATQLWLGITGLFGLAFLG 118 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEFAH+I A PQRSAFLSSFF LVG HGLHV FG++WL L++Q+ + GLI N+ Sbjct: 119 IELYEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGIVWLVTLMVQVARTGLIEANR 178 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VF+FVYL+G + Sbjct: 179 RRLMCLSMFWHFLDVVWIGVFTFVYLLGTL 208 >gi|307129920|ref|YP_003881936.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii 3937] gi|306527449|gb|ADM97379.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii 3937] Length = 204 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 98/194 (50%), Positives = 129/194 (66%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSDC++F + F TYAVL A GP ++FD+ + V Sbjct: 12 AHAEHGHHDTGANKVFGFWIYLMSDCILFGMLFATYAVLVNGTAGGPTGKELFDLKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL +T FG++FI MEIYEF HLI+ A P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNAWLGLTFLFGLVFIGMEIYEFHHLIAEGAGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HG+HV GLIW+ +++IQ+ K GL S N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGIHVTSGLIWIAIMMIQVTKYGLTSRNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 191 WICVFTVVYLMGAM 204 >gi|16763822|ref|NP_459437.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179053|ref|YP_215470.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615369|ref|YP_001589334.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167992293|ref|ZP_02573391.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232416|ref|ZP_02657474.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237553|ref|ZP_02662611.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240265|ref|ZP_02665197.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261125|ref|ZP_02683098.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465532|ref|ZP_02699414.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818950|ref|ZP_02830950.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446076|ref|YP_002039683.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450685|ref|YP_002044476.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470084|ref|ZP_03076068.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736872|ref|YP_002113472.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251191|ref|YP_002145422.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265057|ref|ZP_03165131.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243166|ref|YP_002214395.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390434|ref|ZP_03217045.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927033|ref|ZP_03218235.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238911427|ref|ZP_04655264.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16418948|gb|AAL19396.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62126686|gb|AAX64389.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364733|gb|ABX68501.1| hypothetical protein SPAB_03140 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404739|gb|ACF64961.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408989|gb|ACF69208.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456448|gb|EDX45287.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712374|gb|ACF91595.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631945|gb|EDX50465.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214894|gb|ACH52291.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243312|gb|EDY25932.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289515|gb|EDY28878.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937682|gb|ACH75015.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602879|gb|EDZ01425.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323698|gb|EDZ08893.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205329523|gb|EDZ16287.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333348|gb|EDZ20112.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339947|gb|EDZ26711.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344157|gb|EDZ30921.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349684|gb|EDZ36315.1| cytochrome o ubiquinol oxidase, subunit III [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|267992154|gb|ACY87039.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312911474|dbj|BAJ35448.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084714|emb|CBY94505.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226017|gb|EFX51068.1| Cytochrome O ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322642058|gb|EFY38668.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647877|gb|EFY44352.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652555|gb|EFY48909.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653283|gb|EFY49616.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660568|gb|EFY56804.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322713514|gb|EFZ05085.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128760|gb|ADX16190.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622143|gb|EGE28488.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987390|gb|AEF06373.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 204 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 94/195 (48%), Positives = 127/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFW+YLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGQ-NKIFGFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A + +SWL +T FG FI ME+YEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIAMHKNN-KSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 IWICVF+ VYLMG + Sbjct: 190 IWICVFTVVYLMGAM 204 >gi|153007395|ref|YP_001368610.1| cytochrome o ubiquinol oxidase subunit III [Ochrobactrum anthropi ATCC 49188] gi|151559283|gb|ABS12781.1| Cytochrome o ubiquinol oxidase subunit III [Ochrobactrum anthropi ATCC 49188] Length = 209 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 96/194 (49%), Positives = 129/194 (66%), Gaps = 3/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD++ + + Sbjct: 19 AHEDHHDA--GSTTLVGFWIYLMSDCVLFSGLFATYAVLAHQFAGGPTGRELFDLNFVLI 76 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T++LL+SSL+ A L+ K+ + WL VT G F+ ME+YEF HLI A P Sbjct: 77 ETMLLLVSSLTYGLATLS-MFKKNRAGLLFWLGVTFLLGAAFLAMEVYEFNHLIHEGAGP 135 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HGLH+ GLIW+ VL Q+L+ GL NQ R++CLS+FWHFLD+I Sbjct: 136 GRSAFLSAFFALVGTHGLHITSGLIWILVLSAQLLRDGLTEKNQTRVMCLSLFWHFLDII 195 Query: 197 WICVFSFVYLMGVV 210 WI VF+ VYL+GV+ Sbjct: 196 WIGVFTLVYLLGVL 209 >gi|218549902|ref|YP_002383693.1| cytochrome o ubiquinol oxidase subunit III [Escherichia fergusonii ATCC 35469] gi|218357443|emb|CAQ90082.1| cytochrome o ubiquinol oxidase subunit III [Escherichia fergusonii ATCC 35469] gi|323965116|gb|EGB60575.1| cytochrome o ubiquinol oxidase [Escherichia coli M863] gi|323976086|gb|EGB71179.1| cytochrome o ubiquinol oxidase [Escherichia coli TW10509] Length = 204 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 97/195 (49%), Positives = 128/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGG-NKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYLMG + Sbjct: 190 VWICVFTVVYLMGAM 204 >gi|148560198|ref|YP_001258091.1| cytochrome o ubiquinol oxidase subunit III [Brucella ovis ATCC 25840] gi|148371455|gb|ABQ61434.1| cytochrome o ubiquinol oxidase, subunit III [Brucella ovis ATCC 25840] Length = 209 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 93/194 (47%), Positives = 124/194 (63%), Gaps = 3/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + T +GFWIYLMSDC++F+ F TYAVL +A GP ++FD+ + V Sbjct: 19 AHEDHHDA--GSTTLVGFWIYLMSDCILFSGLFATYAVLAHRFAGGPTGRELFDLQFVLV 76 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T++LL+SSL+ A L+ K + WL VT G F+ MEIYEF HLI A P Sbjct: 77 ETMLLLVSSLTYGLATLS-MYKNNRSGVLGWLGVTFLLGAAFLAMEIYEFHHLIVEGAGP 135 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS+FLS+FF LVG HG H+ GLIW+ VL +L+ GL N+ R++CLS+FWHFLD+I Sbjct: 136 DRSSFLSAFFTLVGTHGFHITSGLIWILVLSAMLLRDGLTERNRTRVMCLSLFWHFLDII 195 Query: 197 WICVFSFVYLMGVV 210 WI VF+ VYL+GV+ Sbjct: 196 WIGVFTLVYLLGVL 209 >gi|315646200|ref|ZP_07899320.1| quinol oxidase polypeptide III [Paenibacillus vortex V453] gi|315278399|gb|EFU41715.1| quinol oxidase polypeptide III [Paenibacillus vortex V453] Length = 208 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 94/203 (46%), Positives = 125/203 (61%), Gaps = 2/203 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 S + D+ D + GFWIYLM+D ++F F TY VL +N GP P Sbjct: 6 TSEQILQAHAHDEHHGHPDMEEVRTFGFWIYLMTDVIIFGTLFATYIVLQQNTDGGPGPA 65 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F + GI ST +LL SS +C A+L+ + +SWL VTA G IFI MEI EF Sbjct: 66 DLFQMGGIITSTFILLASSYTCGLALLSMHKHNVK-GLISWLAVTAGLGAIFIGMEIAEF 124 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HL+ A SAFLS+FF LVG HGLHV FGL+W+ L+IQ+ K+G+ +R++ + Sbjct: 125 NHLVHEGATIGTSAFLSAFFTLVGTHGLHVLFGLVWMIALIIQLAKRGITPVTKRKVNVI 184 Query: 187 SMFWHFLDLIWICVFSFVYLMGV 209 S+FWHFLD++WI VF+ VYLMGV Sbjct: 185 SLFWHFLDVVWIFVFTVVYLMGV 207 >gi|124266932|ref|YP_001020936.1| cytochrome ubiquinol oxidase subunit III [Methylibium petroleiphilum PM1] gi|124259707|gb|ABM94701.1| cytochrome ubiquinol oxidase subunit III [Methylibium petroleiphilum PM1] Length = 215 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 107/204 (52%), Positives = 146/204 (71%), Gaps = 4/204 (1%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + F+V + +GT LGFW+YLMSDCL+FA F + VLG++YA GP+ Sbjct: 15 AGATATPRFHVVGEHH---VENGTLLGFWLYLMSDCLIFACLFAVHGVLGRSYAGGPSGA 71 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 ++FD+ + ++T +LLLSS++ FAM+ +R T+ WL +T FG FI +E+YEF Sbjct: 72 ELFDLKLVAINTSLLLLSSITYGFAMIEMQRRRQ-GATLLWLAITGLFGAGFIGLELYEF 130 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 AHLI AVPQRSAFLSSFF LVG HGLHV FG++WL L++Q+ + GL++ N+RRL+CL Sbjct: 131 AHLIHEGAVPQRSAFLSSFFTLVGTHGLHVSFGVVWLVTLMVQVGRHGLVAENRRRLMCL 190 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLD++WI VF+FVYLMGV+ Sbjct: 191 SMFWHFLDVVWIGVFTFVYLMGVL 214 >gi|157146954|ref|YP_001454273.1| cytochrome o ubiquinol oxidase subunit III [Citrobacter koseri ATCC BAA-895] gi|157084159|gb|ABV13837.1| hypothetical protein CKO_02731 [Citrobacter koseri ATCC BAA-895] Length = 206 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 97/195 (49%), Positives = 127/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 14 HAHEHGHHDAGQT-KIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 72 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A + VSWL +T FG FI MEIYEF HLI Sbjct: 73 VETFLLLFSSITYGMAAIAMHKDN-KSQVVSWLALTFLFGAGFIGMEIYEFHHLIVEGMG 131 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD+ Sbjct: 132 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDV 191 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYLMG + Sbjct: 192 VWICVFTVVYLMGAM 206 >gi|304414865|ref|ZP_07395783.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Regiella insecticola LSR1] gi|304283134|gb|EFL91548.1| cytochrome o ubiquinol oxidase subunit III [Candidatus Regiella insecticola LSR1] Length = 210 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 1 MSRQKIGKSPNFSLFY-VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY 59 MS + + N + + + GFWIYLMSDC++FA F YAVL Sbjct: 1 MSTETLAHPNNITHHNSIHSEHHHQDMGAIKVFGFWIYLMSDCILFAALFANYAVLVNGI 60 Query: 60 AAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFI 119 A GP+ D+FD+ + + T +LLLSS++ AML K ++ L +T G+ F+ Sbjct: 61 ADGPSGKDIFDLRFVLIETFLLLLSSITYGIAMLGI-NKGCKNQVNISLALTFILGLGFV 119 Query: 120 IMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179 MEI+EF LI+ P RSAFLSSFFALV HG+HV GLIW+ +++IQ++++GL + N Sbjct: 120 AMEIFEFHELIAEGYGPDRSAFLSSFFALVATHGIHVSAGLIWIIIMIIQVMRRGLNTTN 179 Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 Q RL+CLS+FWHFLD++WICVF+ VYL+G + Sbjct: 180 QTRLMCLSLFWHFLDVVWICVFTIVYLLGAM 210 >gi|295695108|ref|YP_003588346.1| Cytochrome-c oxidase [Bacillus tusciae DSM 2912] gi|295410710|gb|ADG05202.1| Cytochrome-c oxidase [Bacillus tusciae DSM 2912] Length = 213 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 110/191 (57%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + + ++ LGFW++L +C +FA F TY L GP ++F + I ++TI Sbjct: 21 PETATLEGKNKVLGFWVFLGGECALFASLFATYLTLRGQTLNGPTAQELFHLPIIGLATI 80 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SSL+ + A L + WL VT G+ F+ +++ EF V S Sbjct: 81 LLLTSSLTGVLGINAMHRGNLRS-LLRWLGVTVLLGLGFLAVQVVEFITYAGEGFVFGTS 139 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AF S+FF LVG HG HV FG++W+ +L++Q+ ++G+ ++ S++WHF+D++W+ Sbjct: 140 AFSSAFFTLVGFHGGHVAFGVVWISILILQLKREGITPRKAPKVFIASLYWHFVDVVWVF 199 Query: 200 VFSFVYLMGVV 210 +F+ VYLMG++ Sbjct: 200 IFTVVYLMGIL 210 >gi|227820111|ref|YP_002824082.1| cytochrome O ubiquinol oxidase subunit III [Sinorhizobium fredii NGR234] gi|227339110|gb|ACP23329.1| cytochrome o ubiquinol oxidase subunit III [Sinorhizobium fredii NGR234] Length = 210 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 114/196 (58%), Positives = 148/196 (75%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 FY++++ T LGFW+YLMSDCL+FAV F T+AV+G+NYAAGP+P D+FD+ + Sbjct: 18 FYLEEEHHPEG---STMLGFWLYLMSDCLIFAVLFATHAVVGRNYAAGPSPADLFDLPLV 74 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 V+T +LL SS++ FAML + T+ W+ VTA FGM F+ +E+YEFAH+I A Sbjct: 75 AVNTSMLLFSSITYGFAMLEMEKAKKST-TLVWMAVTALFGMAFVGLELYEFAHMIHEGA 133 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 PQRSAFLSSFF LVG HGLHV G+IW+ VL+ Q+ K+GLI N+RRL+CLSMFWHFLD Sbjct: 134 GPQRSAFLSSFFTLVGTHGLHVTSGIIWMLVLMAQVAKRGLILENKRRLMCLSMFWHFLD 193 Query: 195 LIWICVFSFVYLMGVV 210 ++WI VFSFVYLMGV+ Sbjct: 194 VVWIGVFSFVYLMGVL 209 >gi|49079172|gb|AAT49862.1| PA1319 [synthetic construct] Length = 210 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 95/193 (49%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + T GFW+YLM+DC++FA F TYAVL + A GP+ D+F++ + V Sbjct: 18 HDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDIFELPYVLVE 77 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL+SS + AML++ + ++WL VT G FI MEI EF HLI+ P Sbjct: 78 TAILLVSSCTYGLAMLSAHKGA-KGQAIAWLGVTFLLGAAFIGMEINEFHHLIAEGFGPS 136 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+FWHFLD++W Sbjct: 137 RSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSLFWHFLDIVW 196 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYLMG + Sbjct: 197 ICVFTVVYLMGAL 209 >gi|325921008|ref|ZP_08182891.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas gardneri ATCC 19865] gi|325548515|gb|EGD19486.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas gardneri ATCC 19865] Length = 209 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 100/193 (51%), Positives = 125/193 (64%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D E T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V Sbjct: 18 HDDHEHHDAGGNTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVE 77 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL SSLS AM+++ + + +WL VTA G+ F+ ME++EF HLI A P Sbjct: 78 TFLLLFSSLSFGVAMISAHKRSMT-GLYAWLGVTALLGIGFLCMEVWEFNHLIHEGAGPG 136 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLS+FF LVG HGLHV GL+W+ VLVIQI K GL N RL CLS+FWHFLD+IW Sbjct: 137 RSAFLSAFFTLVGTHGLHVASGLLWMAVLVIQISKNGLTPRNSTRLACLSLFWHFLDIIW 196 Query: 198 ICVFSFVYLMGVV 210 I VF+ VYL+G + Sbjct: 197 IGVFTVVYLLGAL 209 >gi|85058643|ref|YP_454345.1| cytochrome o ubiquinol oxidase subunit III [Sodalis glossinidius str. 'morsitans'] gi|84779163|dbj|BAE73940.1| cytochrome o ubiquinol oxidase subunit III [Sodalis glossinidius str. 'morsitans'] Length = 204 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 95/194 (48%), Positives = 124/194 (63%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSDC++FA F TYAVL + A GP D+F++ + V Sbjct: 12 AHTEHGHHDAGATKVFGFWIYLMSDCILFATLFATYAVLSNSVAGGPTGKDIFELPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ A+LA + + WL +T FG+ FI ME+YEF HLI+ P Sbjct: 72 ETFFLLFSSITYGMAILA-MYRGYKSRVNVWLGMTFLFGLGFICMELYEFHHLIAEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS FF LVG HGLHV GLIW+ V+++Q+ ++GL NQ RL CLS+FWHFLD++ Sbjct: 131 DRSAFLSGFFTLVGTHGLHVTSGLIWILVMMVQVSRRGLTPVNQTRLQCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 191 WICVFTVVYLMGAL 204 >gi|103486991|ref|YP_616552.1| cytochrome c oxidase, subunit III [Sphingopyxis alaskensis RB2256] gi|98977068|gb|ABF53219.1| cytochrome c oxidase, subunit III [Sphingopyxis alaskensis RB2256] Length = 208 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 108/191 (56%), Positives = 140/191 (73%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + + T LGFWIYLMSDCL+FA+ F YAVLG +YAAGPAP D+FD+ I ++T Sbjct: 18 DEHPHPEGHSTMLGFWIYLMSDCLIFAILFACYAVLGGSYAAGPAPKDLFDLKLIALNTA 77 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FA+L R+ WL VT FG+ F+ +E+YEF HLI + A PQRS Sbjct: 78 MLLFSSITYGFAVLQMQQGRVK-GVQLWLAVTGLFGLAFLGIELYEFHHLIEIGATPQRS 136 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AFLS+FF LVG HGLHV FG+IWL L++Q+ K GLI+ N+RR++CLSMFWHFLD++WI Sbjct: 137 AFLSAFFTLVGTHGLHVTFGIIWLVTLMVQLSKHGLIAANKRRVMCLSMFWHFLDVVWIG 196 Query: 200 VFSFVYLMGVV 210 VF+FVYL GV+ Sbjct: 197 VFTFVYLTGVL 207 >gi|123443351|ref|YP_001007325.1| cytochrome o ubiquinol oxidase subunit III [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160741|ref|YP_004297318.1| cytochrome o ubiquinol oxidase subunit III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090312|emb|CAL13178.1| cytochrome O ubiquinol oxidase subunit III [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318604620|emb|CBY26118.1| cytochrome O ubiquinol oxidase subunit III [Yersinia enterocolitica subsp. palearctica Y11] gi|325664971|gb|ADZ41615.1| cytochrome o ubiquinol oxidase subunit III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 204 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 95/195 (48%), Positives = 129/195 (66%), Gaps = 1/195 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + GFWIYLMSDC++FA F TYAVL A GP+ D+FD++ + Sbjct: 11 VAHAEHGHHDAGATKVFGFWIYLMSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ AML K ++ +WL +T FG+ F+ MEIYEF HLI+ Sbjct: 71 VETFLLLFSSITYGIAML-GMNKGHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RSAFLSSFFALV HG+HV GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD+ Sbjct: 130 PDRSAFLSSFFALVATHGIHVTAGLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYL+G + Sbjct: 190 VWICVFTVVYLLGAM 204 >gi|271499590|ref|YP_003332615.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii Ech586] gi|270343145|gb|ACZ75910.1| cytochrome o ubiquinol oxidase, subunit III [Dickeya dadantii Ech586] Length = 204 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 97/194 (50%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSDC++F + F TY+VL A GP ++FD+ + V Sbjct: 12 AHAEHGHHDTGSNKVFGFWIYLMSDCILFGMLFATYSVLVNGTAGGPTGKELFDLKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL +T FG++FI ME+YEF HLI A P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNAWLGLTFLFGLVFIGMEVYEFHHLIVEGAGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLSSFFALVG HG+HV GLIW+ +++IQ+ K GL S N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSSFFALVGTHGIHVTSGLIWIAIMMIQVTKYGLTSTNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 191 WICVFTVVYLMGAM 204 >gi|15596516|ref|NP_250010.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa PAO1] gi|116049271|ref|YP_791926.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa UCBPP-PA14] gi|152989269|ref|YP_001349425.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa PA7] gi|218892576|ref|YP_002441445.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa LESB58] gi|296390304|ref|ZP_06879779.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa PAb1] gi|313106308|ref|ZP_07792552.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa 39016] gi|81783807|sp|Q9I425|CYOC_PSEAE RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName: Full=Cytochrome o ubiquinol oxidase subunit III gi|9947257|gb|AAG04708.1|AE004561_4 cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa PAO1] gi|115584492|gb|ABJ10507.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa UCBPP-PA14] gi|150964427|gb|ABR86452.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas aeruginosa PA7] gi|218772804|emb|CAW28589.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa LESB58] gi|310879054|gb|EFQ37648.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa 39016] Length = 209 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 95/193 (49%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + T GFW+YLM+DC++FA F TYAVL + A GP+ D+F++ + V Sbjct: 18 HDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDIFELPYVLVE 77 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL+SS + AML++ + ++WL VT G FI MEI EF HLI+ P Sbjct: 78 TAILLVSSCTYGLAMLSAHKGA-KGQAIAWLGVTFLLGAAFIGMEINEFHHLIAEGFGPS 136 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+FWHFLD++W Sbjct: 137 RSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSLFWHFLDIVW 196 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYLMG + Sbjct: 197 ICVFTVVYLMGAL 209 >gi|327188657|gb|EGE55863.1| cytochrome O ubiquinol oxidase protein, subunit III [Rhizobium etli CNPAF512] Length = 206 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 114/210 (54%), Positives = 145/210 (69%), Gaps = 5/210 (2%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS + + FY+ + + T LGFW+YLMSDCL+FAV F T+ VLG+NYA Sbjct: 1 MSDHTVDTAEKPE-FYLTEDHHPE---NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 56 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGP+P D+FD+ + ++T +LL SS++ FAML +T+ WL VT FG FI Sbjct: 57 AGPSPADLFDLPIVALNTSMLLFSSITYGFAMLQMERNA-KAETLFWLAVTGLFGAAFIG 115 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+ Sbjct: 116 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 175 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VFSFVYL+GVV Sbjct: 176 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVV 205 >gi|238897314|ref|YP_002922991.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465069|gb|ACQ66843.1| cytochrome o ubiquinol oxidase, subunit III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 204 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 97/193 (50%), Positives = 125/193 (64%), Gaps = 3/193 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D+ GFWIYLMSDC++FA F TY VL A GP D+F++ + V Sbjct: 15 HDEHHEN--GSTKIFGFWIYLMSDCILFAALFATYVVLVNGTAGGPMGKDIFNLPFVLVE 72 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL SS++ FA+LA + WL +T G+ F+ MEI+EF LI A P Sbjct: 73 TFLLLFSSMTYGFAILA-MNQGQKKSVNIWLGLTFLLGLSFVGMEIFEFHELIGEGAGPD 131 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFFALVG HGLHV GLIW+ V+++QI ++GL NQ RL+CLS+FWHFLD+IW Sbjct: 132 RSAFLSSFFALVGTHGLHVALGLIWIVVMMVQISQRGLNPINQTRLMCLSLFWHFLDVIW 191 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYL+G + Sbjct: 192 ICVFTIVYLLGAM 204 >gi|283784256|ref|YP_003364121.1| cytochrome o ubiquinol oxidase subunit 3 [Citrobacter rodentium ICC168] gi|282947710|emb|CBG87265.1| cytochrome o ubiquinol oxidase subunit 3 [Citrobacter rodentium ICC168] Length = 204 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 97/195 (49%), Positives = 127/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGQT-KIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A + VSWL +T FG FI MEIYEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIAMHKNN-KSQVVSWLALTFLFGAGFIGMEIYEFHHLIVNGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYLMG + Sbjct: 190 VWICVFTVVYLMGAM 204 >gi|16128415|ref|NP_414964.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str. K-12 substr. MG1655] gi|24111812|ref|NP_706322.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a str. 301] gi|26246436|ref|NP_752475.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli CFT073] gi|30061929|ref|NP_836100.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a str. 2457T] gi|74311005|ref|YP_309424.1| cytochrome o ubiquinol oxidase subunit III [Shigella sonnei Ss046] gi|89107300|ref|AP_001080.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str. K-12 substr. W3110] gi|110804457|ref|YP_687977.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 5 str. 8401] gi|157157815|ref|YP_001461616.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli E24377A] gi|157159955|ref|YP_001457273.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli HS] gi|170021198|ref|YP_001726152.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ATCC 8739] gi|170080016|ref|YP_001729336.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str. K-12 substr. DH10B] gi|170680623|ref|YP_001742571.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli SMS-3-5] gi|188495693|ref|ZP_03002963.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 53638] gi|191166709|ref|ZP_03028536.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B7A] gi|193065155|ref|ZP_03046228.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E22] gi|194428821|ref|ZP_03061356.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B171] gi|194432598|ref|ZP_03064884.1| cytochrome o ubiquinol oxidase, subunit III [Shigella dysenteriae 1012] gi|194438854|ref|ZP_03070939.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 101-1] gi|209917646|ref|YP_002291730.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli SE11] gi|218552996|ref|YP_002385909.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI1] gi|218688293|ref|YP_002396505.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ED1a] gi|218693893|ref|YP_002401560.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 55989] gi|218698658|ref|YP_002406287.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI39] gi|218703713|ref|YP_002411232.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UMN026] gi|227884561|ref|ZP_04002366.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 83972] gi|238899718|ref|YP_002925514.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli BW2952] gi|253774582|ref|YP_003037413.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160499|ref|YP_003043607.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli B str. REL606] gi|256020400|ref|ZP_05434265.1| cytochrome o ubiquinol oxidase subunit III [Shigella sp. D9] gi|256023953|ref|ZP_05437818.1| cytochrome o ubiquinol oxidase subunit III [Escherichia sp. 4_1_40B] gi|260842631|ref|YP_003220409.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O103:H2 str. 12009] gi|260853653|ref|YP_003227544.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O26:H11 str. 11368] gi|260866591|ref|YP_003232993.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O111:H- str. 11128] gi|293403550|ref|ZP_06647641.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli FVEC1412] gi|293408579|ref|ZP_06652418.1| cytochrome o ubiquinol oxidase [Escherichia coli B354] gi|293413685|ref|ZP_06656334.1| cytochrome o ubiquinol oxidase [Escherichia coli B185] gi|293418500|ref|ZP_06660935.1| cytochrome o ubiquinol oxidase [Escherichia coli B088] gi|298379162|ref|ZP_06989043.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli FVEC1302] gi|300818241|ref|ZP_07098452.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 107-1] gi|300820327|ref|ZP_07100479.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 119-7] gi|300900498|ref|ZP_07118665.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 198-1] gi|300903305|ref|ZP_07121233.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 84-1] gi|300918189|ref|ZP_07134796.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 115-1] gi|300924155|ref|ZP_07140147.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 182-1] gi|300930270|ref|ZP_07145683.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 187-1] gi|300937044|ref|ZP_07151910.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 21-1] gi|300947919|ref|ZP_07162067.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 116-1] gi|300957995|ref|ZP_07170160.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS 175-1] gi|300988017|ref|ZP_07178497.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 45-1] gi|301022579|ref|ZP_07186451.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 69-1] gi|301025683|ref|ZP_07189199.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 196-1] gi|301049631|ref|ZP_07196582.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS 185-1] gi|301301578|ref|ZP_07207713.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 124-1] gi|301330704|ref|ZP_07223306.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 78-1] gi|301647353|ref|ZP_07247165.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS 146-1] gi|307312192|ref|ZP_07591828.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli W] gi|331640948|ref|ZP_08342083.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H736] gi|331645604|ref|ZP_08346708.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M605] gi|331651366|ref|ZP_08352391.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M718] gi|331661809|ref|ZP_08362732.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA143] gi|331666784|ref|ZP_08367658.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA271] gi|331671976|ref|ZP_08372772.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA280] gi|331676101|ref|ZP_08376813.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H591] gi|331681824|ref|ZP_08382457.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H299] gi|332281580|ref|ZP_08393993.1| cytochrome o ubiquinol oxidase subunit III [Shigella sp. D9] gi|78099994|sp|P0ABJ4|CYOC_ECOL6 RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName: Full=Cytochrome o ubiquinol oxidase subunit III; AltName: Full=Ubiquinol oxidase chain C gi|78099995|sp|P0ABJ3|CYOC_ECOLI RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName: Full=Cytochrome o ubiquinol oxidase subunit III; AltName: Full=Ubiquinol oxidase chain C gi|78099996|sp|P0ABJ5|CYOC_SHIFL RecName: Full=Cytochrome o ubiquinol oxidase subunit 3; AltName: Full=Cytochrome o ubiquinol oxidase subunit III; AltName: Full=Ubiquinol oxidase chain C gi|11514519|pdb|1FFT|C Chain C, The Structure Of Ubiquinol Oxidase From Escherichia Coli gi|11514523|pdb|1FFT|H Chain H, The Structure Of Ubiquinol Oxidase From Escherichia Coli gi|26106834|gb|AAN79019.1|AE016756_202 Cytochrome O ubiquinol oxidase subunit III [Escherichia coli CFT073] gi|145654|gb|AAA23633.1| cytochrome o ubiquinol oxidase C subunit [Escherichia coli] gi|1773114|gb|AAB40186.1| cytochrome o ubiquinol oxidase [Escherichia coli] gi|1786633|gb|AAC73533.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str. K-12 substr. MG1655] gi|24050602|gb|AAN42029.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a str. 301] gi|30040173|gb|AAP15906.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 2a str. 2457T] gi|73854482|gb|AAZ87189.1| cytochrome o ubiquinol oxidase subunit III [Shigella sonnei Ss046] gi|85674570|dbj|BAE76210.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str. K12 substr. W3110] gi|110614005|gb|ABF02672.1| cytochrome o ubiquinol oxidase subunit III [Shigella flexneri 5 str. 8401] gi|157065635|gb|ABV04890.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli HS] gi|157079845|gb|ABV19553.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E24377A] gi|169756126|gb|ACA78825.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli ATCC 8739] gi|169887851|gb|ACB01558.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli str. K-12 substr. DH10B] gi|170518341|gb|ACB16519.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli SMS-3-5] gi|188490892|gb|EDU65995.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 53638] gi|190903220|gb|EDV62942.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B7A] gi|192927129|gb|EDV81750.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E22] gi|194413124|gb|EDX29411.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli B171] gi|194419159|gb|EDX35242.1| cytochrome o ubiquinol oxidase, subunit III [Shigella dysenteriae 1012] gi|194422148|gb|EDX38150.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 101-1] gi|209910905|dbj|BAG75979.1| cytochrome O ubiquinol oxidase subunit III [Escherichia coli SE11] gi|218350625|emb|CAU96317.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 55989] gi|218359764|emb|CAQ97305.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI1] gi|218368644|emb|CAR16383.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli IAI39] gi|218425857|emb|CAR06663.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ED1a] gi|218430810|emb|CAR11684.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UMN026] gi|227838647|gb|EEJ49113.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 83972] gi|238860709|gb|ACR62707.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli BW2952] gi|242376211|emb|CAQ30902.1| cytochrome bo terminal oxidase subunit III, subunit of cytochrome bo terminal oxidase [Escherichia coli BL21(DE3)] gi|253325626|gb|ACT30228.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972400|gb|ACT38071.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli B str. REL606] gi|253976610|gb|ACT42280.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli BL21(DE3)] gi|257752302|dbj|BAI23804.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O26:H11 str. 11368] gi|257757778|dbj|BAI29275.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O103:H2 str. 12009] gi|257762947|dbj|BAI34442.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O111:H- str. 11128] gi|260450383|gb|ACX40805.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli DH1] gi|281177600|dbj|BAI53930.1| cytochrome O ubiquinol oxidase subunit III [Escherichia coli SE15] gi|281599766|gb|ADA72750.1| Cytochrome o ubiquinol oxidase subunit 3 [Shigella flexneri 2002017] gi|284920240|emb|CBG33299.1| cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli 042] gi|291325028|gb|EFE64443.1| cytochrome o ubiquinol oxidase [Escherichia coli B088] gi|291429403|gb|EFF02423.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli FVEC1412] gi|291433743|gb|EFF06716.1| cytochrome o ubiquinol oxidase [Escherichia coli B185] gi|291471757|gb|EFF14240.1| cytochrome o ubiquinol oxidase [Escherichia coli B354] gi|298280275|gb|EFI21779.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli FVEC1302] gi|299879995|gb|EFI88206.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 196-1] gi|300298624|gb|EFJ55009.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS 185-1] gi|300315331|gb|EFJ65115.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS 175-1] gi|300355979|gb|EFJ71849.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 198-1] gi|300397460|gb|EFJ80998.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 69-1] gi|300404600|gb|EFJ88138.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 84-1] gi|300407569|gb|EFJ91107.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 45-1] gi|300414640|gb|EFJ97950.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 115-1] gi|300419608|gb|EFK02919.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 182-1] gi|300452519|gb|EFK16139.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 116-1] gi|300457875|gb|EFK21368.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 21-1] gi|300461842|gb|EFK25335.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 187-1] gi|300527112|gb|EFK48181.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 119-7] gi|300529132|gb|EFK50194.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 107-1] gi|300843075|gb|EFK70835.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 124-1] gi|300843365|gb|EFK71125.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 78-1] gi|301074498|gb|EFK89304.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli MS 146-1] gi|306907694|gb|EFN38196.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli W] gi|307552336|gb|ADN45111.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli ABU 83972] gi|309700691|emb|CBI99987.1| cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli ETEC H10407] gi|315059710|gb|ADT74037.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli W] gi|315135112|dbj|BAJ42271.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli DH1] gi|315256255|gb|EFU36223.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 85-1] gi|315294191|gb|EFU53542.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 153-1] gi|315299552|gb|EFU58800.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 16-3] gi|320201674|gb|EFW76250.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli EC4100B] gi|323170515|gb|EFZ56165.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli LT-68] gi|323379725|gb|ADX51993.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli KO11] gi|323938615|gb|EGB34864.1| cytochrome o ubiquinol oxidase [Escherichia coli E1520] gi|323943236|gb|EGB39392.1| cytochrome o ubiquinol oxidase [Escherichia coli E482] gi|323945334|gb|EGB41390.1| cytochrome o ubiquinol oxidase [Escherichia coli H120] gi|323963419|gb|EGB58981.1| cytochrome o ubiquinol oxidase [Escherichia coli H489] gi|323972283|gb|EGB67493.1| cytochrome o ubiquinol oxidase [Escherichia coli TA007] gi|324010060|gb|EGB79279.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 57-2] gi|324016710|gb|EGB85929.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 117-3] gi|324114657|gb|EGC08625.1| cytochrome o ubiquinol oxidase [Escherichia fergusonii B253] gi|324116917|gb|EGC10830.1| cytochrome o ubiquinol oxidase [Escherichia coli E1167] gi|325498279|gb|EGC96138.1| cytochrome o ubiquinol oxidase subunit III [Escherichia fergusonii ECD227] gi|330910222|gb|EGH38732.1| cytochrome O ubiquinol oxidase subunit 3 [Escherichia coli AA86] gi|331037746|gb|EGI09966.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H736] gi|331045766|gb|EGI17892.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M605] gi|331051107|gb|EGI23159.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli M718] gi|331060231|gb|EGI32195.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA143] gi|331066008|gb|EGI37892.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA271] gi|331070965|gb|EGI42324.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA280] gi|331076159|gb|EGI47441.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H591] gi|331081026|gb|EGI52191.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli H299] gi|332094585|gb|EGI99631.1| cytochrome o ubiquinol oxidase, subunit III [Shigella boydii 5216-82] gi|332103932|gb|EGJ07278.1| cytochrome o ubiquinol oxidase subunit III [Shigella sp. D9] gi|332341793|gb|AEE55127.1| cytochrome O ubiquinol oxidase subunit III CyoC [Escherichia coli UMNK88] gi|332761785|gb|EGJ92064.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri 2747-71] gi|333007961|gb|EGK27437.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri K-218] gi|333021982|gb|EGK41228.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri K-304] Length = 204 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|290474674|ref|YP_003467554.1| cytochrome o ubiquinol oxidase subunit III [Xenorhabdus bovienii SS-2004] gi|289173987|emb|CBJ80774.1| cytochrome o ubiquinol oxidase, subunit III [Xenorhabdus bovienii SS-2004] Length = 203 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 125/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSD ++FA F TYAVL A GP+ D+F++ + V Sbjct: 11 AHEHHGHHDVGSMKIFGFWIYLMSDLVLFASLFATYAVLANGTAGGPSGKDIFELPFVLV 70 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ FAML+ K + WL +T FG+ F+ MEIYEF LIS P Sbjct: 71 ETFLLLFSSITYGFAMLS-MNKGKTGQVNLWLFITFLFGLGFVSMEIYEFHKLISEGFGP 129 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLSSFFALV HG+HV GLIW+ ++++Q+ ++GL N+ RL CLS+FWHFLD++ Sbjct: 130 DRSAFLSSFFALVATHGIHVTCGLIWIIIMMVQVARRGLTEVNRTRLSCLSLFWHFLDVV 189 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 190 WICVFTVVYLMGAM 203 >gi|329915609|ref|ZP_08276293.1| Cytochrome O ubiquinol oxidase subunit III [Oxalobacteraceae bacterium IMCC9480] gi|327544870|gb|EGF30240.1| Cytochrome O ubiquinol oxidase subunit III [Oxalobacteraceae bacterium IMCC9480] Length = 202 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 103/191 (53%), Positives = 135/191 (70%), Gaps = 4/191 (2%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + +GT LGFW+YLMSDCL+FA F YAVLG+NYA GP ++FD+ + ++T Sbjct: 15 EHHPE---NGTTLGFWLYLMSDCLVFAALFAVYAVLGRNYAGGPTGAELFDLPLVALNTA 71 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 LL+SS++ FAML KR+ T+ W+ +T G FI +E+YEF HLI A PQRS Sbjct: 72 FLLVSSITYGFAMLEMQRKRVRS-TLIWMGITGLIGACFIGLEMYEFIHLIHEGAGPQRS 130 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 FL++FF LVG HGLHV FG+IWL L++Q+ GL + N RRL+CLSMFWHFLD++WI Sbjct: 131 GFLTAFFTLVGTHGLHVMFGIIWLVTLMLQVSVHGLTTENSRRLMCLSMFWHFLDVVWIG 190 Query: 200 VFSFVYLMGVV 210 VF+FVYLMGV+ Sbjct: 191 VFTFVYLMGVL 201 >gi|311280673|ref|YP_003942904.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter cloacae SCF1] gi|308749868|gb|ADO49620.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter cloacae SCF1] Length = 204 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 98/195 (50%), Positives = 129/195 (66%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFWIYLMSDC++F++ F TYAVL N A GP+ D+F++ + Sbjct: 12 HAHEHGHHDS-GSTKVFGFWIYLMSDCILFSILFATYAVLVNNTAGGPSGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A K + +SWL +T FG FI ME+YEF HLI Sbjct: 71 VETALLLFSSITYGLAAIA-MYKNNKSQVISWLALTWLFGAGFIGMELYEFHHLIVEGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL+ QI ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMFQIARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVFS VYLMG + Sbjct: 190 VWICVFSVVYLMGAM 204 >gi|289662731|ref|ZP_06484312.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 210 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 101/192 (52%), Positives = 126/192 (65%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 E T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T Sbjct: 20 HDHEHHDGGGNTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVET 79 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 +LL SSLS FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P R Sbjct: 80 FLLLFSSLSFGFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPSR 138 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAFLS+FF LVG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI Sbjct: 139 SAFLSAFFTLVGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWI 198 Query: 199 CVFSFVYLMGVV 210 VF+ VYL+G + Sbjct: 199 GVFTVVYLLGAL 210 >gi|91209500|ref|YP_539486.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UTI89] gi|117622690|ref|YP_851603.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli APEC O1] gi|215485511|ref|YP_002327942.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O127:H6 str. E2348/69] gi|218557339|ref|YP_002390252.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli S88] gi|237707576|ref|ZP_04538057.1| cytochrome o ubiquinol oxidase subunit III [Escherichia sp. 3_2_53FAA] gi|91071074|gb|ABE05955.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli UTI89] gi|115511814|gb|ABI99888.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli APEC O1] gi|215263583|emb|CAS07913.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O127:H6 str. E2348/69] gi|218364108|emb|CAR01773.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli S88] gi|222032225|emb|CAP74964.1| Cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli LF82] gi|226898786|gb|EEH85045.1| cytochrome o ubiquinol oxidase subunit III [Escherichia sp. 3_2_53FAA] gi|294489594|gb|ADE88350.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli IHE3034] gi|312945007|gb|ADR25834.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O83:H1 str. NRG 857C] gi|315289855|gb|EFU49245.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 110-3] gi|323952958|gb|EGB48826.1| cytochrome o ubiquinol oxidase [Escherichia coli H252] gi|323958623|gb|EGB54326.1| cytochrome o ubiquinol oxidase [Escherichia coli H263] Length = 204 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 101/204 (49%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + VSWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|107100770|ref|ZP_01364688.1| hypothetical protein PaerPA_01001798 [Pseudomonas aeruginosa PACS2] Length = 204 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 95/193 (49%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + T GFW+YLM+DC++FA F TYAVL + A GP+ D+F++ + V Sbjct: 13 HDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDIFELPYVLVE 72 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL+SS + AML++ + ++WL VT G FI MEI EF HLI+ P Sbjct: 73 TAILLVSSCTYGLAMLSAHKGA-KGQAIAWLGVTFLLGAAFIGMEINEFHHLIAEGFGPS 131 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+FWHFLD++W Sbjct: 132 RSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSLFWHFLDIVW 191 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYLMG + Sbjct: 192 ICVFTVVYLMGAL 204 >gi|15800160|ref|NP_286172.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 EDL933] gi|15829738|ref|NP_308511.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. Sakai] gi|168749892|ref|ZP_02774914.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4113] gi|168756972|ref|ZP_02781979.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4401] gi|168761636|ref|ZP_02786643.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4501] gi|168768381|ref|ZP_02793388.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4486] gi|168776264|ref|ZP_02801271.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4196] gi|168783296|ref|ZP_02808303.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4076] gi|168786277|ref|ZP_02811284.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC869] gi|168800313|ref|ZP_02825320.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC508] gi|195938503|ref|ZP_03083885.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. EC4024] gi|208807579|ref|ZP_03249916.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4206] gi|208816111|ref|ZP_03257290.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4045] gi|208822882|ref|ZP_03263200.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4042] gi|209396662|ref|YP_002269076.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4115] gi|217325930|ref|ZP_03442014.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. TW14588] gi|254791614|ref|YP_003076451.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. TW14359] gi|261223911|ref|ZP_05938192.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. FRIK2000] gi|261256375|ref|ZP_05948908.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. FRIK966] gi|291281337|ref|YP_003498155.1| Cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli O55:H7 str. CB9615] gi|12513289|gb|AAG54780.1|AE005222_5 cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. EDL933] gi|13359941|dbj|BAB33907.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. Sakai] gi|187768299|gb|EDU32143.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4196] gi|188015926|gb|EDU54048.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4113] gi|188999391|gb|EDU68377.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4076] gi|189355966|gb|EDU74385.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4401] gi|189362389|gb|EDU80808.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4486] gi|189367976|gb|EDU86392.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4501] gi|189373539|gb|EDU91955.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC869] gi|189377389|gb|EDU95805.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC508] gi|208727380|gb|EDZ76981.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4206] gi|208732759|gb|EDZ81447.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4045] gi|208737075|gb|EDZ84759.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4042] gi|209158062|gb|ACI35495.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. EC4115] gi|209743924|gb|ACI70269.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli] gi|209743926|gb|ACI70270.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli] gi|209743928|gb|ACI70271.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli] gi|209743930|gb|ACI70272.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli] gi|209743932|gb|ACI70273.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli] gi|217322151|gb|EEC30575.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli O157:H7 str. TW14588] gi|254591014|gb|ACT70375.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. TW14359] gi|290761210|gb|ADD55171.1| Cytochrome o ubiquinol oxidase subunit 3 [Escherichia coli O55:H7 str. CB9615] gi|320638424|gb|EFX08138.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. G5101] gi|320643804|gb|EFX12927.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H- str. 493-89] gi|320649155|gb|EFX17733.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H- str. H 2687] gi|320656048|gb|EFX23964.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661198|gb|EFX28629.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O55:H7 str. USDA 5905] gi|320665174|gb|EFX32267.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli O157:H7 str. LSU-61] Length = 204 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 101/204 (49%), Positives = 133/204 (65%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + V + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATVHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|193068624|ref|ZP_03049585.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E110019] gi|192957987|gb|EDV88429.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli E110019] Length = 204 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 133/204 (65%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P+RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPERSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|237730407|ref|ZP_04560888.1| cytochrome o ubiquinol oxidase subunit III [Citrobacter sp. 30_2] gi|283834251|ref|ZP_06353992.1| cytochrome o ubiquinol oxidase, subunit III [Citrobacter youngae ATCC 29220] gi|226905946|gb|EEH91864.1| cytochrome o ubiquinol oxidase subunit III [Citrobacter sp. 30_2] gi|291069773|gb|EFE07882.1| cytochrome o ubiquinol oxidase, subunit III [Citrobacter youngae ATCC 29220] Length = 204 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 94/195 (48%), Positives = 128/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFW+YLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGQT-KIFGFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A K + +SWL +T FG FI ME+YEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTFLFGAGFIGMELYEFHHLIVNGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYLMG + Sbjct: 190 VWICVFTVVYLMGAM 204 >gi|222107118|ref|YP_002547909.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium vitis S4] gi|221738297|gb|ACM39193.1| cytochrome o ubiquinol oxidase subunit III [Agrobacterium vitis S4] Length = 205 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 113/196 (57%), Positives = 143/196 (72%), Gaps = 4/196 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGI 74 FY+ ++ T LGFW+YLMSDCL+FA+ F TYAVLG+NYAAGPAP D+FD+ + Sbjct: 13 FYLTEEHHPE---SSTNLGFWLYLMSDCLIFAMLFATYAVLGRNYAAGPAPADLFDLKLV 69 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T +LL SS++ FAML+ T+ WL VT FG IF+ +E+YEF HLI A Sbjct: 70 AINTAMLLFSSITYGFAMLSMEKNN-KAATLIWLGVTGVFGAIFLALELYEFVHLIHEGA 128 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 P RSAFLS+FF LVG HGLHV FG+IWL L+ Q+ K GLI N+RRL+CLSMFWHFLD Sbjct: 129 GPNRSAFLSAFFTLVGTHGLHVTFGIIWLVTLMAQVGKHGLIEANRRRLMCLSMFWHFLD 188 Query: 195 LIWICVFSFVYLMGVV 210 +IWI VFS+VYL+GV+ Sbjct: 189 VIWIGVFSYVYLLGVI 204 >gi|326389122|ref|ZP_08210702.1| cytochrome c oxidase, subunit III [Novosphingobium nitrogenifigens DSM 19370] gi|326206353|gb|EGD57190.1| cytochrome c oxidase, subunit III [Novosphingobium nitrogenifigens DSM 19370] Length = 212 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 105/190 (55%), Positives = 139/190 (73%), Gaps = 1/190 (0%) Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV 80 + + T LGFWIYLMSD L+FA+ F +AVLG NYAAGP P D+F++ + +T + Sbjct: 23 EHDHPEGGSTQLGFWIYLMSDLLIFAMLFAAFAVLGGNYAAGPGPKDLFELPLVAFNTSM 82 Query: 81 LLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140 LL SS++ FAM+ R + WL+VTA FG F+ +E+YEF++LI A PQRSA Sbjct: 83 LLFSSITYGFAMIEMQKGR-VGGVQFWLVVTALFGATFLGVELYEFSNLIHEGATPQRSA 141 Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200 FLS+FF LVG HGLHV FGLIWL VL++Q+ ++GL N+RRL+CLSMFWHFLD++W+ V Sbjct: 142 FLSAFFTLVGTHGLHVTFGLIWLGVLLVQLSQRGLEEANKRRLLCLSMFWHFLDVVWVGV 201 Query: 201 FSFVYLMGVV 210 F+FVYLMGV+ Sbjct: 202 FTFVYLMGVL 211 >gi|242240300|ref|YP_002988481.1| cytochrome o ubiquinol oxidase subunit III [Dickeya dadantii Ech703] gi|242132357|gb|ACS86659.1| cytochrome o ubiquinol oxidase, subunit III [Dickeya dadantii Ech703] Length = 203 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 94/203 (46%), Positives = 127/203 (62%), Gaps = 1/203 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67 + + GFWIYLMSDC++F + F TYAVL A GP+ D Sbjct: 2 ATDTLHRNVAHAEHGHHDTGATKVFGFWIYLMSDCILFGMLFATYAVLVNGTAGGPSGKD 61 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 +FD+ + V T LL SS++ AM+A K + +WL +T FG++FI MEIYEF Sbjct: 62 IFDLKFVLVETFALLFSSITYGMAMIA-MNKNSKSQVNTWLALTFLFGLVFIGMEIYEFH 120 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 LI P RSAFLS+FFALVG HG+HV GLIW+ +++ Q+ +GL + N+ RL+CLS Sbjct: 121 KLIEEGFGPDRSAFLSAFFALVGTHGIHVTSGLIWIAIMMTQVAGRGLTATNRTRLMCLS 180 Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210 +FWHFLD++WICVF+ VYLMG + Sbjct: 181 LFWHFLDVVWICVFTVVYLMGAM 203 >gi|145299869|ref|YP_001142710.1| cytochrome o ubiquinol oxidase subunit III [Aeromonas salmonicida subsp. salmonicida A449] gi|142852641|gb|ABO90962.1| cytochrome o ubiquinol oxidase subunit III [Aeromonas salmonicida subsp. salmonicida A449] Length = 204 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 102/200 (51%), Positives = 129/200 (64%), Gaps = 4/200 (2%) Query: 14 LFYVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70 L + + HD GFWIYLMSDC++FA F TYAVL A GP+ D+F+ Sbjct: 6 LHHTHEGAHDHGHHDAGANKVFGFWIYLMSDCILFACLFATYAVLVNGTAGGPSGKDIFE 65 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + +F T++LL SS++ FAMLA K WLLVT G FI MEIYEF HLI Sbjct: 66 LPFVFAETMLLLFSSITFGFAMLA-MNKGRAAAVNGWLLVTFVLGAGFIAMEIYEFHHLI 124 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + P RSAFLS+FF LVG HG+HV GLIWL V+++ + KKGL + RL+CLS+FW Sbjct: 125 AEGYGPDRSAFLSAFFTLVGTHGIHVTSGLIWLIVMMVLVAKKGLTDRTRSRLMCLSLFW 184 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVF+ VYLMG + Sbjct: 185 HFLDVVWICVFTVVYLMGAM 204 >gi|161504382|ref|YP_001571494.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865729|gb|ABX22352.1| hypothetical protein SARI_02493 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 204 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 96/195 (49%), Positives = 127/195 (65%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + GFWIYLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 12 HAHEHGHHDAGQT-KVFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A + +SWL +T FG FI MEIYEF HLI Sbjct: 71 VETFLLLFSSITYGMAAIAMHKNNQS-QVISWLALTFLFGAGFIGMEIYEFHHLIVEGMG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 IWICVF+ VYLMG + Sbjct: 190 IWICVFTVVYLMGAM 204 >gi|260596798|ref|YP_003209369.1| cytochrome o ubiquinol oxidase subunit III [Cronobacter turicensis z3032] gi|260215975|emb|CBA28616.1| Cytochrome o ubiquinol oxidase subunit 3 [Cronobacter turicensis z3032] Length = 205 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%) Query: 11 NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70 N L + + GFWIYLMSDC++FA F TYAVL A GP D+F+ Sbjct: 7 NHELAHGSHEHGHHDAGANKVFGFWIYLMSDCILFACLFATYAVLVNGTAGGPTGKDIFE 66 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + V T +LL SS++ AM+A K + +SWL +T FG F+ MEIYEF HLI Sbjct: 67 LPFVLVETFLLLFSSITYGMAMIA-MNKDKQSQVMSWLALTFLFGAGFVAMEIYEFHHLI 125 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + P +S FLS+FF LVG HG+HV GLIW+ V++I + ++GL N+ RL+CLSMFW Sbjct: 126 AEGFGPDKSGFLSAFFTLVGTHGIHVTSGLIWMVVMMIHVSRRGLTHNNRARLMCLSMFW 185 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFS VYLMG + Sbjct: 186 HFLDVVWICVFSVVYLMGAM 205 >gi|306813104|ref|ZP_07447297.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli NC101] gi|331656485|ref|ZP_08357447.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA206] gi|305853867|gb|EFM54306.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli NC101] gi|320197132|gb|EFW71749.1| Cytochrome O ubiquinol oxidase subunit III [Escherichia coli WV_060327] gi|331054733|gb|EGI26742.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli TA206] Length = 204 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + VSWL +T FG FI ME+YEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVVSWLALTWLFGAGFIGMELYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|156935021|ref|YP_001438937.1| cytochrome o ubiquinol oxidase subunit III [Cronobacter sakazakii ATCC BAA-894] gi|156533275|gb|ABU78101.1| hypothetical protein ESA_02872 [Cronobacter sakazakii ATCC BAA-894] Length = 205 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 96/200 (48%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 11 NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70 N L + + GFWIYLMSDC++FA F TYAVL A GP D+F+ Sbjct: 7 NHELAHGSHEHGHHDAGANKVFGFWIYLMSDCILFACLFATYAVLVNGTAGGPTGKDIFE 66 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + V T +LL SS++ AM+A + +SWL +T FG F+ MEIYEF HLI Sbjct: 67 LPFVLVETFLLLFSSITYGMAMIA-MNNNKQSQVMSWLALTFLFGAGFVAMEIYEFHHLI 125 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + P +S FLS+FF LVG HG+HV GLIW+ V++I + ++GL N+ RL+CLSMFW Sbjct: 126 AEGFGPDKSGFLSAFFTLVGTHGIHVTSGLIWMVVMMIHVSRRGLTHNNRARLMCLSMFW 185 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFS VYLMG + Sbjct: 186 HFLDVVWICVFSVVYLMGAM 205 >gi|157369331|ref|YP_001477320.1| cytochrome o ubiquinol oxidase subunit III [Serratia proteamaculans 568] gi|157321095|gb|ABV40192.1| Cytochrome o ubiquinol oxidase subunit III [Serratia proteamaculans 568] Length = 205 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + + GFWIYLMSDC++FA F TYAVL A GP+ D+FD+ + V Sbjct: 12 AHAEHGHHDAGETKVFGFWIYLMSDCILFASLFATYAVLVNGTAGGPSGKDIFDLKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ AM+ K + +WL +T FG+ F+ MEIYEF HLI P Sbjct: 72 ETFLLLFSSITYGMAMI-GMNKGKVGSVNTWLFLTFLFGLGFVAMEIYEFHHLIVEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS FFALV HGLHV GL+W+ +++IQ+ K+GL S N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSGFFALVATHGLHVTTGLVWIVIMMIQVSKRGLTSTNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+GV+ Sbjct: 191 WICVFTVVYLLGVM 204 >gi|295691074|ref|YP_003594767.1| cytochrome o ubiquinol oxidase subunit III [Caulobacter segnis ATCC 21756] gi|295432977|gb|ADG12149.1| cytochrome o ubiquinol oxidase, subunit III [Caulobacter segnis ATCC 21756] Length = 208 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 113/209 (54%), Positives = 152/209 (72%), Gaps = 4/209 (1%) Query: 2 SRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA 61 S+ + + FY+ + +GT LGFWIYLMSDCL+FAV F YAVLG+NYAA Sbjct: 3 SQAHALTAADKDRFYMTKEHHPE---NGTLLGFWIYLMSDCLIFAVLFACYAVLGRNYAA 59 Query: 62 GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIM 121 GP+ D+FD+ + V+T +LLLSS++ FAM+++ K++ ++WL VT G+ F+ + Sbjct: 60 GPSGADLFDLPLVAVNTALLLLSSITYGFAMISAQAKKVKP-VLAWLAVTGLLGLGFLSL 118 Query: 122 EIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQR 181 E+YEF HLI A PQRSAFLSSFF LVG HGLHV FG+IWL L++Q+ ++GL + +R Sbjct: 119 ELYEFHHLIHEGAGPQRSAFLSSFFVLVGTHGLHVTFGVIWLVTLMVQVAQRGLGAEMKR 178 Query: 182 RLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RL+CLSMFWHFLD+IWI VFSFVYL+GV+ Sbjct: 179 RLMCLSMFWHFLDVIWIGVFSFVYLLGVL 207 >gi|312961437|ref|ZP_07775940.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens WH6] gi|311284332|gb|EFQ62910.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens WH6] Length = 204 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 92/198 (46%), Positives = 128/198 (64%), Gaps = 2/198 (1%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + + ++ GFWIYLM+DC++FA F YAVL + A GP+ +D+F++ Sbjct: 9 DIAHTHEQGHEDAGSLSL-FGFWIYLMTDCILFATLFAGYAVLRDSVAGGPSSVDIFELP 67 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + T++LLLSS++ +AMLA + H + WL +T G FI MEI EF HLI Sbjct: 68 YVLGETMLLLLSSITYGYAMLAMNRGQQGH-VLRWLGLTFVLGAGFIAMEINEFHHLIEA 126 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RSAFL++FF LVG HG HV GL+W+ VL+ Q+ ++GL + N RL CLS+FWHF Sbjct: 127 GHGPDRSAFLTAFFTLVGTHGAHVLTGLVWMAVLMAQVHQRGLTTTNATRLSCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYL+GVV Sbjct: 187 LDVVWICVFTVVYLLGVV 204 >gi|300715584|ref|YP_003740387.1| cytochrome o ubiquinol oxidase subunit III [Erwinia billingiae Eb661] gi|299061420|emb|CAX58532.1| Cytochrome o ubiquinol oxidase subunit III [Erwinia billingiae Eb661] Length = 204 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 95/197 (48%), Positives = 127/197 (64%), Gaps = 1/197 (0%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + GFWIYLMSDC++FA F T+ V+ + A GPA D+F++ Sbjct: 9 HHDAHAEHGHHDAGANKVFGFWIYLMSDCIIFATLFATFGVMVNSTAGGPAGKDIFELPF 68 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + T +LLLSS++ FA+++ K +SWL++T FG FI MEIYEF HLI Sbjct: 69 VLGETALLLLSSITYGFAVIS-MNKGSKGSVISWLMLTFLFGAGFIAMEIYEFHHLIMEG 127 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 PQRS FLS+FF LVG HGLHV GLIW+ VL+ Q+ K+GL N+ R++CLS+FWHFL Sbjct: 128 FGPQRSGFLSAFFTLVGTHGLHVTSGLIWMAVLMYQVSKRGLTPTNRTRILCLSLFWHFL 187 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVF+ VYLMG + Sbjct: 188 DVVWICVFTIVYLMGAM 204 >gi|92113084|ref|YP_573012.1| cytochrome c oxidase, subunit III [Chromohalobacter salexigens DSM 3043] gi|91796174|gb|ABE58313.1| cytochrome bo3 quinol oxidase subunit 3 [Chromohalobacter salexigens DSM 3043] Length = 205 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 97/195 (49%), Positives = 128/195 (65%), Gaps = 1/195 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + D E GFW+YLMSD ++F F TYAVL A GP+ D+F++ I Sbjct: 12 HAHDGHEHHDAGGMKVFGFWVYLMSDLVIFGSLFATYAVLMNGTAGGPSGADIFELPLIL 71 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 +ST +LL SS + A+LA + + WL++T F G FI +EIYEF HLI+ Sbjct: 72 ISTFLLLFSSFTYGMAVLA-MNADRVSQVRGWLILTFFLGAGFIGLEIYEFHHLIAEGFG 130 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RSAFLSSFF LVG HGLHV FGLIW+ V+++Q+ KGL + R++CLS+FWHFLD+ Sbjct: 131 PDRSAFLSSFFTLVGTHGLHVTFGLIWMLVMIVQLSTKGLNDMTRPRIMCLSLFWHFLDI 190 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+FVYLMGV+ Sbjct: 191 VWICVFTFVYLMGVL 205 >gi|237808829|ref|YP_002893269.1| cytochrome o ubiquinol oxidase, subunit III [Tolumonas auensis DSM 9187] gi|237501090|gb|ACQ93683.1| cytochrome o ubiquinol oxidase, subunit III [Tolumonas auensis DSM 9187] Length = 204 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 102/191 (53%), Positives = 130/191 (68%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + E + GFWIYLMSDC++FA F TYAVL ++A GP D+F++ + T Sbjct: 15 EHEHHDSGSNSVFGFWIYLMSDCILFATLFATYAVLSGSFAGGPTGKDIFELPYVLTETF 74 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 LL+SS + AMLA + + WL VT FFG FI MEI EF+HLIS P RS Sbjct: 75 CLLISSFTYGMAMLA-MNRGEQSSVMKWLAVTFFFGAAFIGMEINEFSHLISEGYGPDRS 133 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AFLS FFAL+G HGLHVF GL+W+ VL+IQ+ + GL + NQ RL+CLS+FWHFLD++WIC Sbjct: 134 AFLSGFFALIGTHGLHVFSGLVWMIVLMIQVAQNGLTTTNQTRLMCLSLFWHFLDIVWIC 193 Query: 200 VFSFVYLMGVV 210 VF+ VYLMGV+ Sbjct: 194 VFTVVYLMGVL 204 >gi|309794840|ref|ZP_07689261.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 145-7] gi|308121493|gb|EFO58755.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 145-7] Length = 204 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 99/204 (48%), Positives = 131/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P S FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDHSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|110640690|ref|YP_668418.1| cytochrome o ubiquinol oxidase subunit III [Escherichia coli 536] gi|191173519|ref|ZP_03035046.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli F11] gi|300997383|ref|ZP_07181723.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 200-1] gi|110342282|gb|ABG68519.1| cytochrome O ubiquinol oxidase subunit III [Escherichia coli 536] gi|190906228|gb|EDV65840.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli F11] gi|300304202|gb|EFJ58722.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 200-1] gi|324010690|gb|EGB79909.1| cytOchrome o ubiquinol oxidase, subunit III [Escherichia coli MS 60-1] Length = 204 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 131/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFFLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|27375262|ref|NP_766791.1| cytochrome O ubiquinol oxidase subunit III [Bradyrhizobium japonicum USDA 110] gi|27348398|dbj|BAC45416.1| cytochrome O ubiquinol oxidase subunit III [Bradyrhizobium japonicum USDA 110] Length = 209 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 110/191 (57%), Positives = 139/191 (72%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + + T LGFWIYLMSDCL+FA+ F + VLG NYAAGPAP D+FD+ + V+T Sbjct: 19 DEHPHPEGYSTSLGFWIYLMSDCLIFAMLFAAFGVLGANYAAGPAPKDLFDLDLVAVNTS 78 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LLLSS++ FAML + I +T WL +T FG FI +E+ EFAH+I A PQRS Sbjct: 79 MLLLSSITYGFAMLTMQ-QNKIAQTQMWLAITGLFGAAFIGIELTEFAHMIHEGATPQRS 137 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AFLS+FF LVG HGLHV GLIWL L++Q+ K GLI N+RRL+CLSMFWHFLD++WI Sbjct: 138 AFLSAFFTLVGTHGLHVSCGLIWLVTLMVQVWKFGLIEANRRRLMCLSMFWHFLDVVWIG 197 Query: 200 VFSFVYLMGVV 210 VF+FVYL+GV+ Sbjct: 198 VFTFVYLLGVL 208 >gi|262276815|ref|ZP_06054608.1| cytoChrome c oxidase subunit 3 (Cytochrome c oxidasepolypeptide III) [alpha proteobacterium HIMB114] gi|262223918|gb|EEY74377.1| cytoChrome c oxidase subunit 3 (Cytochrome c oxidasepolypeptide III) [alpha proteobacterium HIMB114] Length = 262 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 11/198 (5%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG------KNYAAGPAPIDVFDI 71 + + V G G ++++S+ + F +F Y P I+ D Sbjct: 68 HNGDHTPVVQIGMRYGMILFIVSEVMFFVAWFWAYFDASLYPDAVGGSVWPPKGIETLDP 127 Query: 72 S-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 ++T++LLLS + ++A A L++T G IF + + YE+ + Sbjct: 128 WHIPLINTLILLLSGTTVTWAHHALLEND-RKSLKQGLILTVILGAIFTMFQAYEY---V 183 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + ++F+ G HG HV G ++L V + ++ + + +W Sbjct: 184 VAPFNLSSGIYGATFYMATGFHGFHVLVGTLFLLVCLFRVNAGHYKPDHHFGFEAAAWYW 243 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F+ VY+ G Sbjct: 244 HFVDVVWLFLFAAVYIWG 261 >gi|73538717|ref|YP_299084.1| cytochrome ubiquinol oxidase subunit III [Ralstonia eutropha JMP134] gi|72122054|gb|AAZ64240.1| cytochrome ubiquinol oxidase subunit III [Ralstonia eutropha JMP134] Length = 229 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 101/185 (54%), Positives = 131/185 (70%), Gaps = 1/185 (0%) Query: 26 DHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSS 85 +GT LGFWIYLMSDCL+FA F Y VLG++YA GP ++FD+ + ++T LLLSS Sbjct: 45 VPNGTLLGFWIYLMSDCLIFACLFAAYGVLGRSYAGGPTGAELFDLPLVALNTSFLLLSS 104 Query: 86 LSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSF 145 ++ FAML + + T WL +T G F+ +EIYEF HL+ A P RS FL+SF Sbjct: 105 ITYGFAMLQMQ-QGRVGGTQGWLAITGVLGACFLGVEIYEFVHLVGEGAGPWRSGFLTSF 163 Query: 146 FALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVY 205 F+LV HGLHV FG+IWL L++Q+ GLI N+RRL+CLSMFWHFLD++WI VF+FVY Sbjct: 164 FSLVSTHGLHVTFGIIWLITLMVQVRLHGLIPENRRRLMCLSMFWHFLDVVWIGVFTFVY 223 Query: 206 LMGVV 210 LMGV+ Sbjct: 224 LMGVL 228 >gi|320540329|ref|ZP_08039981.1| cytochrome o ubiquinol oxidase subunit III [Serratia symbiotica str. Tucson] gi|320029649|gb|EFW11676.1| cytochrome o ubiquinol oxidase subunit III [Serratia symbiotica str. Tucson] Length = 205 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 98/194 (50%), Positives = 129/194 (66%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + + GFWIYLMSDC++FA F TYAVL A GPA D+F++ + V Sbjct: 12 AHAEHGHHDAGETKVFGFWIYLMSDCILFACLFATYAVLANGTAGGPAGKDIFELKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ AM+A + + WL +T FG+ F+ MEIYEF HLI P Sbjct: 72 ETFLLLFSSITYGMAMIAMKKGK-VGGVNIWLFLTFLFGLGFVAMEIYEFHHLIVEGFGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLSSFFALV HGLHV GLIW+ +++IQ+ ++GL S N+ RL+CLS+FWHFLD+I Sbjct: 131 DRSAFLSSFFALVATHGLHVSIGLIWITIMMIQVSQRGLTSINKTRLMCLSLFWHFLDVI 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+GV+ Sbjct: 191 WICVFTVVYLLGVM 204 >gi|22124926|ref|NP_668349.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis KIM 10] gi|45440614|ref|NP_992153.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar Microtus str. 91001] gi|51595300|ref|YP_069491.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pseudotuberculosis IP 32953] gi|108808651|ref|YP_652567.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Antiqua] gi|108811090|ref|YP_646857.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Nepal516] gi|145600060|ref|YP_001164136.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Pestoides F] gi|149364988|ref|ZP_01887023.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis CA88-4125] gi|153950151|ref|YP_001402060.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pseudotuberculosis IP 31758] gi|162418305|ref|YP_001607428.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Angola] gi|165926547|ref|ZP_02222379.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Orientalis str. F1991016] gi|165935983|ref|ZP_02224553.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Orientalis str. IP275] gi|166010997|ref|ZP_02231895.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Antiqua str. E1979001] gi|166213115|ref|ZP_02239150.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Antiqua str. B42003004] gi|167398830|ref|ZP_02304354.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421497|ref|ZP_02313250.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423092|ref|ZP_02314845.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469783|ref|ZP_02334487.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis FV-1] gi|170025460|ref|YP_001721965.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pseudotuberculosis YPIII] gi|186894317|ref|YP_001871429.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pseudotuberculosis PB1/+] gi|218930196|ref|YP_002348071.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis CO92] gi|229838771|ref|ZP_04458930.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896075|ref|ZP_04511245.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Pestoides A] gi|229899339|ref|ZP_04514482.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar Orientalis str. India 195] gi|229901317|ref|ZP_04516439.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Nepal516] gi|270489505|ref|ZP_06206579.1| putative quinol oxidase, subunit 3 [Yersinia pestis KIM D27] gi|21957764|gb|AAM84600.1|AE013705_3 cytochrome o ubiquinol oxidase subunit III [Yersinia pestis KIM 10] gi|45435471|gb|AAS61030.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis biovar Microtus str. 91001] gi|51588582|emb|CAH20190.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pseudotuberculosis IP 32953] gi|108774738|gb|ABG17257.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis Nepal516] gi|108780564|gb|ABG14622.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis Antiqua] gi|115348807|emb|CAL21761.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis CO92] gi|145211756|gb|ABP41163.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis Pestoides F] gi|149291401|gb|EDM41475.1| cytochrome O ubiquinol oxidase subunit III [Yersinia pestis CA88-4125] gi|152961646|gb|ABS49107.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pseudotuberculosis IP 31758] gi|162351120|gb|ABX85068.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis Angola] gi|165916128|gb|EDR34735.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Orientalis str. IP275] gi|165921475|gb|EDR38672.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Orientalis str. F1991016] gi|165989997|gb|EDR42298.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Antiqua str. E1979001] gi|166205902|gb|EDR50382.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Antiqua str. B42003004] gi|166960416|gb|EDR56437.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051334|gb|EDR62742.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057262|gb|EDR67008.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751994|gb|ACA69512.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pseudotuberculosis YPIII] gi|186697343|gb|ACC87972.1| cytochrome o ubiquinol oxidase, subunit III [Yersinia pseudotuberculosis PB1/+] gi|229681246|gb|EEO77340.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Nepal516] gi|229687741|gb|EEO79814.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar Orientalis str. India 195] gi|229695137|gb|EEO85184.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700998|gb|EEO89027.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis Pestoides A] gi|270338009|gb|EFA48786.1| putative quinol oxidase, subunit 3 [Yersinia pestis KIM D27] gi|320016353|gb|ADV99924.1| cytochrome o ubiquinol oxidase subunit III [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 204 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 91/195 (46%), Positives = 127/195 (65%), Gaps = 1/195 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + GFW+YLMSDC++FA F TYAVL A GP+ ++FD++ + Sbjct: 11 VAHAEHGHHDAGATKVFGFWVYLMSDCILFATLFATYAVLVNGTAGGPSGKELFDLNFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ AML +K + + +WL T FG+ FI ME+YEF LI Sbjct: 71 VETFLLLFSSITYGVAML-GMSKGSVKQVNTWLGFTFLFGLGFIAMELYEFHKLIEEGYG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS++FALVG HGLHV GL W+ +++IQ+ ++GL S N+ RL+CLS+FWHFLD+ Sbjct: 130 PARSGFLSAYFALVGTHGLHVTAGLAWIIIMMIQVARRGLNSTNRTRLMCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYL+G + Sbjct: 190 VWICVFTVVYLLGAI 204 >gi|28198531|ref|NP_778845.1| cytochrome O ubiquinol oxidase subunit III [Xylella fastidiosa Temecula1] gi|71897569|ref|ZP_00679814.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1] gi|182681210|ref|YP_001829370.1| cytochrome o ubiquinol oxidase, subunit III [Xylella fastidiosa M23] gi|28056615|gb|AAO28494.1| cytochrome O ubiquinol oxidase subunit III [Xylella fastidiosa Temecula1] gi|71732472|gb|EAO34525.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1] gi|182631320|gb|ACB92096.1| cytochrome o ubiquinol oxidase, subunit III [Xylella fastidiosa M23] Length = 202 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 103/195 (52%), Positives = 130/195 (66%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + +D D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + Sbjct: 10 HNRDHAHHDT-GDNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVL 68 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SSL+ FAM+A+ + I WL+VTA FG+ F+ ME+YEF HLI A Sbjct: 69 VETFLLLFSSLTFGFAMIAAHKRH-IPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAG 127 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RSAFLS+FF LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFLD+ Sbjct: 128 PGRSAFLSAFFTLVGTHGLHVASGLLWMLILVIQIVKNGLTPRNSTRLACLSLFWHFLDV 187 Query: 196 IWICVFSFVYLMGVV 210 IWI VF+ VYL+G + Sbjct: 188 IWIGVFTIVYLLGAL 202 >gi|146338787|ref|YP_001203835.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp. ORS278] gi|146191593|emb|CAL75598.1| Cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) [Bradyrhizobium sp. ORS278] Length = 209 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 148/210 (70%), Gaps = 2/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 M+ +FYV D+ + + T LGFWIYLMSDCL+FA+ F Y VLG YA Sbjct: 1 MTIAAGTMKAGEPVFYVVDEHDHP-EGSSTQLGFWIYLMSDCLIFAILFAVYGVLGTKYA 59 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGPAP D+FD+S + ++T LLLSSL+ FAML+ + + WL+VT FG+ F+ Sbjct: 60 AGPAPKDLFDLSLVALNTSFLLLSSLTYGFAMLSMQ-QNRVGAMQGWLVVTGLFGLAFLG 118 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+ EFAH+I A PQRSAFLSSFF LVG HGLHV FGL+WL L++Q+ + GLI N+ Sbjct: 119 IELTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLVWLVTLMVQVKRFGLIEANR 178 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD+IWI VF+FVYLMG++ Sbjct: 179 RRLVCLSMFWHFLDVIWIGVFTFVYLMGML 208 >gi|238920119|ref|YP_002933634.1| cytochrome o ubiquinol oxidase, subunit III, [Edwardsiella ictaluri 93-146] gi|238869688|gb|ACR69399.1| cytochrome o ubiquinol oxidase, subunit III, putative [Edwardsiella ictaluri 93-146] Length = 205 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 97/194 (50%), Positives = 127/194 (65%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + + GFWIYLMSDC++FA F TYAVL A GP ++FD+ + V Sbjct: 12 AHAEHGHHDAGETKVFGFWIYLMSDCILFAGLFATYAVLVNGTAGGPTGKEIFDLKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ A+ A K + WLL+T FG+ F+ ME+YEF HLI+ P Sbjct: 72 ETFLLLFSSITYGMAIGA-MNKGSVGGVNVWLLLTFLFGLGFVSMEVYEFHHLITEGFGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS FLSSFFALVG HGLHV GL W+ V++IQI K GL + N+ RL+CLS+FWHFLD+I Sbjct: 131 DRSGFLSSFFALVGTHGLHVTAGLTWIVVMMIQISKFGLTAANKTRLMCLSLFWHFLDVI 190 Query: 197 WICVFSFVYLMGVV 210 WIC+F+ VYL+GV+ Sbjct: 191 WICLFTAVYLLGVM 204 >gi|300721999|ref|YP_003711279.1| cytochrome o ubiquinol oxidase subunit III [Xenorhabdus nematophila ATCC 19061] gi|297628496|emb|CBJ89063.1| cytochrome o ubiquinol oxidase, subunit III [Xenorhabdus nematophila ATCC 19061] Length = 203 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 99/194 (51%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 D GFWIYLMSD ++FA F TYAVL A GP D+F++ + V Sbjct: 11 AHDTHGHHDAGANKIFGFWIYLMSDLVLFASLFATYAVLVNGTAGGPTGKDIFELDFVLV 70 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ FAML+ K + + WL +T FG+ FI ME+YEF LIS P Sbjct: 71 ETFLLLFSSITYGFAMLS-MNKGKVAQVNLWLFITFLFGLGFISMEVYEFHKLISEGFGP 129 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLSSFFALV HGLHV FGLIW+ VL++Q+ ++GL N+ RL CLS+FWHFLD++ Sbjct: 130 DRSAFLSSFFALVATHGLHVTFGLIWIIVLMVQVSRRGLTEVNRTRLNCLSLFWHFLDVV 189 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 190 WICVFTIVYLMGAM 203 >gi|293392552|ref|ZP_06636872.1| quinol oxidase subunit III [Serratia odorifera DSM 4582] gi|291424954|gb|EFE98163.1| quinol oxidase subunit III [Serratia odorifera DSM 4582] Length = 204 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 97/194 (50%), Positives = 129/194 (66%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + + GFWIYLMSDC++FA F TYAVL A GP+ D+FD+ + V Sbjct: 12 AHAEHGHHDAGETKVFGFWIYLMSDCILFASLFATYAVLVNGTAGGPSGKDIFDLKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ AM+ K + +WL +T FG+ F+ MEIYEF HLI+ P Sbjct: 72 ETFLLLFSSITYGMAMI-GMNKGKVGSVNTWLFLTFLFGLGFVAMEIYEFHHLIAEGFGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 SAFLSSFFALVG HGLHV GL+W+ +++IQ+ K GL S N+ RL+CLS+FWHFLD++ Sbjct: 131 DHSAFLSSFFALVGTHGLHVSAGLVWIIIMMIQVSKHGLTSTNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+GV+ Sbjct: 191 WICVFTVVYLLGVM 204 >gi|77361152|ref|YP_340727.1| cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C) [Pseudoalteromonas haloplanktis TAC125] gi|76876063|emb|CAI87285.1| cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) [Pseudoalteromonas haloplanktis TAC125] Length = 215 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 100/193 (51%), Positives = 132/193 (68%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D T GFW+YLM+DCL+FA FF TYAVL N A G + D+F++ + V Sbjct: 24 HDAHAHHDTSSNTTFGFWLYLMTDCLLFASFFATYAVLFMNTAGGVSGKDIFELDFVAVE 83 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LL+SS++ FAM+A+ ++ T+ WL VT G++FI ME+YEF HLI PQ Sbjct: 84 TAALLISSITFGFAMIAAQGQK-KALTLIWLAVTFCLGVVFISMEVYEFNHLIVHGNGPQ 142 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 +SAFL+SFFALVGLHGLHV GLIW+ V++I++ K+GL RL CLS+FWHFLD++W Sbjct: 143 KSAFLTSFFALVGLHGLHVTAGLIWMSVMMIEVAKRGLGKATVTRLSCLSLFWHFLDIVW 202 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYLMG + Sbjct: 203 ICVFTLVYLMGAM 215 >gi|29570634|ref|NP_818793.1| cytochrome c oxidase subunit III [Apteronotus albifrons] gi|29501143|dbj|BAC67500.1| cytochrome oxidase subunit 3 [Apteronotus albifrons] Length = 261 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK------NYAAGPAPIDVFDIS 72 + G G +++ S+ L FA FF + P I D Sbjct: 68 QGHHTSPVQKGLRFGMILFITSEVLFFAGFFWAFYHSSLAPTPELGTHWPPTGITPLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWCHHSLMEGERKQAIQSLTLTIILGLYFTALQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 A+ S+FF G HGLHV G +L V +++ +K S + + +WHF Sbjct: 185 PFTIADGAYGSTFFVSTGFHGLHVIIGSSFLAVCLLRQIKHHFTSEHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ +F +Y G Sbjct: 245 VDVVWLFLFVSIYWWG 260 >gi|323184740|gb|EFZ70111.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia coli 1357] Length = 199 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 100/195 (51%), Positives = 130/195 (66%), Gaps = 2/195 (1%) Query: 17 VKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + D GT GFWIYLMSDC++F++ F TYAVL A GP D+F++ + Sbjct: 6 AHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVL 65 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF HLI Sbjct: 66 VETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMG 124 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CLS+FWHFLD+ Sbjct: 125 PDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDV 184 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYLMG + Sbjct: 185 VWICVFTVVYLMGAM 199 >gi|288962726|ref|YP_003453020.1| cytochrome o ubiquinol oxidase subunit III [Azospirillum sp. B510] gi|288914992|dbj|BAI76476.1| cytochrome o ubiquinol oxidase subunit III [Azospirillum sp. B510] Length = 212 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 111/198 (56%), Positives = 144/198 (72%), Gaps = 3/198 (1%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 +F+VKD+ + T LGFWIYLMSDCL+FAV F TY VLG +YA GP P ++FD+ Sbjct: 17 PVFHVKDEHAH--EGASTALGFWIYLMSDCLIFAVLFATYGVLGTSYAGGPTPKELFDLK 74 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + ++T +LL SS++ FAMLA R +T WL +T FG+ F+ +E++EFAHLI Sbjct: 75 LVALNTSMLLFSSITYGFAMLAMEKGRT-GQTQGWLFITLLFGLAFLGIELFEFAHLIHE 133 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 A P RSAFLSSFF LVG HGLHV FG +WL L+IQ+ ++GLI N+RRL+CLSMFWHF Sbjct: 134 GAGPWRSAFLSSFFTLVGTHGLHVTFGSVWLVTLMIQVARRGLIPANRRRLMCLSMFWHF 193 Query: 193 LDLIWICVFSFVYLMGVV 210 LD+IWI VF++VYLMG + Sbjct: 194 LDVIWIGVFTYVYLMGAL 211 >gi|117617508|ref|YP_857448.1| cytochrome o ubiquinol oxidase subunit III [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117558915|gb|ABK35863.1| cytochrome o ubiquinol oxidase, subunit III [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 203 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 100/198 (50%), Positives = 130/198 (65%), Gaps = 4/198 (2%) Query: 16 YVKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + HD GFWIYLMSDC++FA F TYAVL A GP+ D+F++ Sbjct: 7 HHTQGAHEDGHHDAGANKVFGFWIYLMSDCILFATLFATYAVLVNGTAGGPSGKDIFELP 66 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 +F T++LLLSS++ F MLA K + +WL +T FG FI MEIYEF HLI+ Sbjct: 67 FVFAETMLLLLSSITFGFGMLA-MNKNKVAAVNTWLFITFLFGAGFIAMEIYEFHHLIAE 125 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS+FF LVG HG+HV GLIW+ V+++ + KKGL N+ RL+CLS+FWHF Sbjct: 126 GYGPDRSGFLSAFFTLVGTHGIHVTSGLIWIIVMMVLVAKKGLTDRNRTRLMCLSLFWHF 185 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVF+ VYLMGV+ Sbjct: 186 LDVVWICVFTVVYLMGVM 203 >gi|333010887|gb|EGK30313.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri K-272] gi|333021385|gb|EGK40638.1| cytochrome o ubiquinol oxidase, subunit III [Shigella flexneri K-227] Length = 204 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL +T FG FI MEIYEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL S N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDMVWICVFTVVYLMGAM 204 >gi|170767661|ref|ZP_02902114.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia albertii TW07627] gi|170123149|gb|EDS92080.1| cytochrome o ubiquinol oxidase, subunit III [Escherichia albertii TW07627] Length = 204 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 98/204 (48%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + + + D GT GFWIYLMSDC++F++ F TYAVL A GP Sbjct: 2 ATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGK 61 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ + V T +LL SS++ A +A K + +SWL++T FG FI ME+YEF Sbjct: 62 DIFELPFVLVETFLLLFSSITYGMAAIA-MYKNNKSQVISWLMLTWLFGAGFIGMELYEF 120 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI P RS FLS+FFALVG HGLHV GLIW+ VL++QI ++GL N+ R++CL Sbjct: 121 HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTGTNRTRIMCL 180 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMG + Sbjct: 181 SLFWHFLDVVWICVFTVVYLMGAM 204 >gi|461800|sp|Q03439|COX3_BACP3 RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III; AltName: Full=Oxidase aa(3) subunit 3 gi|77450|pir||JX0142 cytochrome-c oxidase (EC 1.9.3.1) chain III - thermophilic bacterium PS-3 gi|217151|dbj|BAA03047.1| cytochtome c oxidase subunit 3 [Bacillus sp. PS3] Length = 207 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LGFW++L + ++FA F TY L GP+ ++F + +F++T++LL Sbjct: 21 TLEGKNKFLGFWLFLGGETVLFASLFATYLALKDKTNGGPSAEELFQMPVVFMATMLLLT 80 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +A+ K W +T G F+ +EIYEF + SAF S Sbjct: 81 SSLTSVYAIYHMKNFDFK-KMQLWFGITVLLGAGFLGLEIYEFNEYVHEGHKFTTSAFAS 139 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 +F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 140 AFYTLVGTHGSHVAFGLLWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWVFIFTV 199 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 200 VYLMGMV 206 >gi|261346372|ref|ZP_05974016.1| cytochrome o ubiquinol oxidase, subunit III [Providencia rustigianii DSM 4541] gi|282565689|gb|EFB71224.1| cytochrome o ubiquinol oxidase, subunit III [Providencia rustigianii DSM 4541] Length = 204 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 3/197 (1%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 L + + GFW+Y+MSD ++FA F TY VL A GP D+F + Sbjct: 11 LAHAEHGHHDAGGTK--VFGFWLYIMSDLILFACLFATYVVLADGTAGGPEGKDIFSLKF 68 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + T +LL+SS++ FAM+A ++ + WL T G+ F+IME+YEF LI+ Sbjct: 69 VLGETFLLLVSSITYGFAMIAMHKGKIAY-VNVWLFATFLLGLGFVIMEVYEFHELIAEG 127 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 P RS FLS FFALV HGLHV GL+W+ +++IQI ++GL N+ RL CLS+FWHFL Sbjct: 128 FGPDRSGFLSGFFALVATHGLHVSAGLVWIIIMMIQISRRGLTEVNKTRLNCLSLFWHFL 187 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVF+ VYL+G + Sbjct: 188 DVVWICVFTVVYLLGAI 204 >gi|15837989|ref|NP_298677.1| cytochrome O ubiquinol oxidase, subunit III [Xylella fastidiosa 9a5c] gi|9106396|gb|AAF84197.1|AE003970_4 cytochrome O ubiquinol oxidase, subunit III [Xylella fastidiosa 9a5c] Length = 202 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 127/191 (66%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + + T Sbjct: 13 DHAHHDTGDNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVLIETF 72 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SSL+ FAM+A+ + I WL+VTA FG+ F+ ME+YEF HLI A P RS Sbjct: 73 LLLFSSLTFGFAMIAAHKRH-IPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAGPGRS 131 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AFLS+FF LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFLD+IWI Sbjct: 132 AFLSAFFTLVGTHGLHVASGLLWMLILVIQIVKNGLTPRNNTRLACLSLFWHFLDVIWIG 191 Query: 200 VFSFVYLMGVV 210 VF+ VYL+G + Sbjct: 192 VFTIVYLLGAL 202 >gi|268592044|ref|ZP_06126265.1| cytochrome o ubiquinol oxidase, subunit III [Providencia rettgeri DSM 1131] gi|291312437|gb|EFE52890.1| cytochrome o ubiquinol oxidase, subunit III [Providencia rettgeri DSM 1131] Length = 204 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 120/194 (61%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFW+Y+MSD ++FA F TY VL A GPA D+F + + Sbjct: 12 AHAEHGHHDAGGTKVFGFWLYIMSDLILFACLFATYVVLADGTAGGPAGKDIFSLKFVLG 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL+SS++ FAM+A + I WL T G+ F+IMEIYEF LI+ P Sbjct: 72 ETFLLLVSSITYGFAMIAMHKGK-IAAVNLWLFATFLLGLGFVIMEIYEFHELIAEGFGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS FLS FFALV HGLHV GLIW+ +++IQ+ ++GL N+ RL CLS+FWHFLD++ Sbjct: 131 DRSGFLSGFFALVATHGLHVTAGLIWIIIMMIQVTRRGLTDVNKTRLNCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYL+G + Sbjct: 191 WICVFTVVYLLGAI 204 >gi|152968965|ref|YP_001334074.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577207|ref|YP_002240091.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella pneumoniae 342] gi|238893377|ref|YP_002918111.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae NTUH-K2044] gi|288936841|ref|YP_003440900.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella variicola At-22] gi|290510103|ref|ZP_06549473.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. 1_1_55] gi|150953814|gb|ABR75844.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566265|gb|ACI08041.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella pneumoniae 342] gi|238545693|dbj|BAH62044.1| cytochrome o ubiquinol oxidase subunit III [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891550|gb|ADC59868.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella variicola At-22] gi|289776819|gb|EFD84817.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. 1_1_55] Length = 203 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 99/198 (50%), Positives = 126/198 (63%), Gaps = 2/198 (1%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + + GFWIYLMSDC++FA F TYAVL A GP D+F++ Sbjct: 8 HTAHAHEHGHHDTGPM-KVFGFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGKDIFELP 66 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + V T +LL SS++ A +A K + VSWL +T FG FI MEIYEF HLI Sbjct: 67 FVLVETALLLFSSITYGMAAIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIME 125 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS+FFALVG HGLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHF Sbjct: 126 GFGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLSLFWHF 185 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVFS VYLMG + Sbjct: 186 LDVVWICVFSVVYLMGAM 203 >gi|148253543|ref|YP_001238128.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp. BTAi1] gi|146405716|gb|ABQ34222.1| cytochrome bo3 quinol oxidase subunit 3 [Bradyrhizobium sp. BTAi1] Length = 209 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 117/210 (55%), Positives = 147/210 (70%), Gaps = 2/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 M+ +FYV D+ E + T LGFWIYLMSDCL+FA+ F Y VLG YA Sbjct: 1 MTVAMGSMKAGEPVFYVVDEHEHP-EGSSTMLGFWIYLMSDCLIFAILFAVYGVLGAKYA 59 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AGPAP D+FD+S + V+T LLLSSL+ FAML+ + + +WL +T FG+ F+ Sbjct: 60 AGPAPKDLFDLSLVAVNTSFLLLSSLTYGFAMLSMQ-QNRVGAMQAWLAITGLFGLAFLG 118 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+ EFAH+I A PQRSAFLSSFF LVG HGLHV FGLIWL L++Q+ GLI N+ Sbjct: 119 IELTEFAHMIHEGATPQRSAFLSSFFTLVGTHGLHVTFGLIWLVTLMVQVKTYGLIEANR 178 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD+IWI VF+FVYLMG++ Sbjct: 179 RRLVCLSMFWHFLDVIWIGVFTFVYLMGML 208 >gi|110834896|ref|YP_693755.1| cytochrome o ubiquinol oxidase subunit III [Alcanivorax borkumensis SK2] gi|110648007|emb|CAL17483.1| cytochrome o ubiquinol oxidase, subunit III [Alcanivorax borkumensis SK2] Length = 222 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 142/210 (67%), Gaps = 4/210 (1%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 M+ F VK +GT LGFWIYLMSDCL+FA F TY VL ++YA Sbjct: 16 MTANANSTHDGQLEFLVKGDHHP---QNGTLLGFWIYLMSDCLIFACLFATYGVLSRSYA 72 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP +++FD+S I V+T +LL+SS++ FAML R+ T+ WL VT G+ F+ Sbjct: 73 GGPTGMELFDLSLIAVNTSLLLVSSITYGFAMLQMQANRVK-GTMFWLAVTGLLGLGFLS 131 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI + A PQ S F ++FFALVG HGLHVFFG++WL L+ Q+ K GLI N+ Sbjct: 132 LELYEFHHLIHVGAGPQTSGFWTAFFALVGTHGLHVFFGIVWLVTLLFQLKKHGLIQENK 191 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RR+ CLSMFWHFLD++W+ VF++VYLMGV+ Sbjct: 192 RRVFCLSMFWHFLDVVWVGVFTYVYLMGVL 221 >gi|212634273|ref|YP_002310798.1| cytochrome c oxidase subunit III [Shewanella piezotolerans WP3] gi|212555757|gb|ACJ28211.1| Cytochrome c oxidase, subunit III [Shewanella piezotolerans WP3] Length = 223 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 97/193 (50%), Positives = 128/193 (66%), Gaps = 2/193 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + T GFW+YLM+DC++FA F TYAVL N G + D+F+++ + + Sbjct: 20 AAHGEHPDSSQ-NTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELNFVLI 78 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T+ LLLSS++ A L A + TV WLL+T G +FI MEIYEF HLI P Sbjct: 79 ETVALLLSSITFGMA-LIFAKRHNRRATVIWLLITLALGCVFIGMEIYEFHHLIEQGNGP 137 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 QRSAFLSSFFALVG+HGLHV GLIW+ +++I++LK GL + RL CLS+FWHFLD++ Sbjct: 138 QRSAFLSSFFALVGMHGLHVTAGLIWMVIMMIEVLKTGLNHRSITRLGCLSLFWHFLDIV 197 Query: 197 WICVFSFVYLMGV 209 WICVF+ VYL+G Sbjct: 198 WICVFTVVYLLGA 210 >gi|295399679|ref|ZP_06809660.1| Cytochrome-c oxidase [Geobacillus thermoglucosidasius C56-YS93] gi|312111802|ref|YP_003990118.1| cytochrome-c oxidase [Geobacillus sp. Y4.1MC1] gi|294978082|gb|EFG53679.1| Cytochrome-c oxidase [Geobacillus thermoglucosidasius C56-YS93] gi|311216903|gb|ADP75507.1| Cytochrome-c oxidase [Geobacillus sp. Y4.1MC1] Length = 206 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + + + ++ +LGFW +L + ++FA F T+ L A GP ++F + +FVST Sbjct: 15 EPERATLEGKNKFLGFWFFLGGETVLFASLFATFIALRDKTAGGPTSEELFQMPIVFVST 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +A+ K W +T G+ F+ +EI+EF + Sbjct: 75 MILLTSSLTSVYAIHHMKNFDFK-KMQLWFGITVLLGLAFLGLEIFEFYEYVHEGFKYST 133 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ LVGLHG HV FGL W+ L+I+ K+GL N + S++WHF+D++W+ Sbjct: 134 SAFSSAFYTLVGLHGSHVAFGLSWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWV 193 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 194 FIFTVVYLMGMV 205 >gi|190895345|ref|YP_001985637.1| cytochrome O ubiquinol oxidase protein, subunit III [Rhizobium etli CIAT 652] gi|190699290|gb|ACE93374.1| cytochrome O ubiquinol oxidase protein, subunit III [Rhizobium etli CIAT 652] Length = 206 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 113/210 (53%), Positives = 143/210 (68%), Gaps = 5/210 (2%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 MS + + FY+ + + T LGFW+YLMSDCL+FAV F T+ VLG+NYA Sbjct: 1 MSDHTVDTAEKPE-FYLTEDHHPE---NSTNLGFWLYLMSDCLIFAVLFATHGVLGRNYA 56 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 AG P D+FD+ + ++T +LL SS++ FAML +T+ WL VT FG FI Sbjct: 57 AGRRPADLFDLPIVALNTSMLLFSSITYGFAMLQMERNA-KAETLFWLAVTGLFGAAFIG 115 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLI A P RSAFLSSFF LVG HGLHV FG+IWL L++Q+ GLI N+ Sbjct: 116 LELYEFIHLIHEGAGPTRSAFLSSFFTLVGTHGLHVTFGIIWLITLMVQVSMHGLIEANR 175 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RRL+CLSMFWHFLD++WI VFSFVYL+GVV Sbjct: 176 RRLMCLSMFWHFLDVVWIGVFSFVYLLGVV 205 >gi|254428757|ref|ZP_05042464.1| cytochrome o ubiquinol oxidase, subunit III [Alcanivorax sp. DG881] gi|196194926|gb|EDX89885.1| cytochrome o ubiquinol oxidase, subunit III [Alcanivorax sp. DG881] Length = 212 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 144/210 (68%), Gaps = 4/210 (1%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 M+ F VK +GT LGFWIYLMSDCL+FA F TY VLG++YA Sbjct: 6 MTADVNSTQDGQLEFLVKGDHHP---QNGTLLGFWIYLMSDCLIFAALFATYGVLGRSYA 62 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP +++FD+S I ++T +LL+SS++ FAML ++ T+ WL VT G+ F+ Sbjct: 63 GGPTGMELFDLSLIAINTSLLLVSSITYGFAMLHMQANKVK-GTMFWLAVTGLLGLGFLS 121 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E+YEF HLIS+ A PQ S F ++FFALVG HGLHVFFG++WL L+ Q+ K GLI N+ Sbjct: 122 LELYEFHHLISVGAGPQTSGFWTAFFALVGTHGLHVFFGIVWLVTLLFQLKKHGLIPENK 181 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RR+ CLSMFWHFLD++W+ VF++VYLMGV+ Sbjct: 182 RRVFCLSMFWHFLDVVWVGVFTYVYLMGVL 211 >gi|224020977|ref|YP_002608210.1| cytochrome c oxidase subunit 3 [Carica papaya] gi|170522389|gb|ACB20499.1| cytochrome c oxidase subunit 3 [Carica papaya] Length = 265 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDIS 72 + + V G GF +++S+ + F F + A P I V D Sbjct: 71 EGHHTKVVQLGLRYGFIPFIVSEVMFFFALFWASSHSSLAPAVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ F +Y G + Sbjct: 247 FVDVVWLFPFVSIYWWGGI 265 >gi|25057836|ref|NP_740068.1| cytochrome c oxidase subunit III [Caranx melampygus] gi|25006075|dbj|BAC23689.1| cytochrome c oxidase subunit III [Caranx melampygus] Length = 261 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGCWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIQSLALTILLGGYFTCLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V ++ L+ S + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLRHHFTSDHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|170748151|ref|YP_001754411.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium radiotolerans JCM 2831] gi|170654673|gb|ACB23728.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium radiotolerans JCM 2831] Length = 210 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 110/204 (53%), Positives = 140/204 (68%), Gaps = 5/204 (2%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 +P F ++ S T LGFW+YLMSDCL+FA F TY VLG++YAAGP P Sbjct: 11 AAAPVFYQ-IDEEGHHSEG---STMLGFWLYLMSDCLIFATLFATYGVLGRSYAAGPTPK 66 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 ++FD+ GI V+T +LL SS++ FAML + + +T WL VT FG F+ +EI EF Sbjct: 67 ELFDLPGIAVNTAMLLFSSITYGFAMLE-MDRDRVKQTQIWLAVTGLFGAAFVALEIREF 125 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HL A P RSAFLSSF+ LV HGLHV G++WL VL++Q+ K+GLI N+RRL+CL Sbjct: 126 VHLFHEGAPPWRSAFLSSFYTLVSTHGLHVSMGILWLVVLMVQVGKRGLIVENKRRLMCL 185 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLDLIWI VF+ VYLMGV+ Sbjct: 186 SMFWHFLDLIWIGVFTVVYLMGVL 209 >gi|77020017|ref|YP_337804.1| cytochrome c oxidase subunit III [Lates calcarifer] gi|62902008|gb|AAY18955.1| cytochrome c oxidase subunit III [Lates calcarifer] Length = 261 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFNHSSLAPTPELGGNWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A A + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHAIMEGK-RKQAIHALALTILLGSYFTFLQAMEYN-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + +FF G HGLHV G +L + + + ++ S + + + Sbjct: 183 -EAPFTIADGVYGCTFFVATGFHGLHVLIGSTFLAICLARQIQHHFTSEHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|51893236|ref|YP_075927.1| cytochrome C oxidase subunit III [Symbiobacterium thermophilum IAM 14863] gi|51856925|dbj|BAD41083.1| cytochrome C oxidase subunit III [Symbiobacterium thermophilum IAM 14863] Length = 210 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Query: 16 YVKDKK--ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + D ++ D LGFW+++ S+ + FA V Y V Y G P D+F+I Sbjct: 14 WAHDAHAHQTNTGIDNRKLGFWLFIASESIFFACLLVGYLVFRGGYQPGVGPRDLFNIEL 73 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 VST VLL+SSL+ A+ A+ W+LVTA G+ F+ + YEF H Sbjct: 74 TTVSTFVLLMSSLAMVLAVNAAQRNEGR-AARRWVLVTALMGLTFLGFQAYEFTHFYHAG 132 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 S F ++F+ L G HG HV G+IWL L+ KGL + ++WHF+ Sbjct: 133 LSLSSSVFGTAFYTLTGFHGAHVAVGVIWLLTLLYHGRGKGLTVDKADDVEVAGLYWHFV 192 Query: 194 DLIWICVFSFVYLM 207 D++WI +F+ VYL+ Sbjct: 193 DIVWIVLFTVVYLL 206 >gi|138894619|ref|YP_001125072.1| cytochrome caa3-type oxidase III [Geobacillus thermodenitrificans NG80-2] gi|196247772|ref|ZP_03146474.1| cytochrome c oxidase subunit III [Geobacillus sp. G11MC16] gi|1841879|dbj|BAA11113.1| cytochrome c oxidase subunit III [Geobacillus stearothermophilus] gi|134266132|gb|ABO66327.1| Cytochrome caa3-type oxidase III [Geobacillus thermodenitrificans NG80-2] gi|196212556|gb|EDY07313.1| cytochrome c oxidase subunit III [Geobacillus sp. G11MC16] Length = 206 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LGFW++L + ++FA F TY L GP+ ++F + +F++T++LL Sbjct: 20 TLEGKNKFLGFWLFLGGETVLFASLFATYLALKDKTNGGPSGEELFQMPIVFMATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +A+ K W +T G F+ +EIYEF + SAF S Sbjct: 80 SSLTSVYAIYHMKNFDF-QKMQLWFGITVLLGAGFLALEIYEFYEYVHEGHKFTSSAFGS 138 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 +F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 139 AFYTLVGTHGAHVAFGLLWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWVFIFTV 198 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 199 VYLMGMV 205 >gi|56419619|ref|YP_146937.1| cytochrome c oxidase subunit III [Geobacillus kaustophilus HTA426] gi|261419281|ref|YP_003252963.1| cytochrome-c oxidase [Geobacillus sp. Y412MC61] gi|297530749|ref|YP_003672024.1| cytochrome-c oxidase [Geobacillus sp. C56-T3] gi|319766097|ref|YP_004131598.1| cytochrome-c oxidase [Geobacillus sp. Y412MC52] gi|56379461|dbj|BAD75369.1| cytochrome c oxidase subunit III [Geobacillus kaustophilus HTA426] gi|261375738|gb|ACX78481.1| Cytochrome-c oxidase [Geobacillus sp. Y412MC61] gi|297254001|gb|ADI27447.1| Cytochrome-c oxidase [Geobacillus sp. C56-T3] gi|317110963|gb|ADU93455.1| Cytochrome-c oxidase [Geobacillus sp. Y412MC52] Length = 206 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 1/187 (0%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LGFW++L + ++FA F TY L GP+ ++F + +F++T++LL Sbjct: 20 TLEGKNKFLGFWLFLGGETVLFASLFATYLALKDKTNGGPSAEELFQMPVVFMATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +A+ K W +T G F+ +EIYEF + SAF S Sbjct: 80 SSLTSVYAIYHMKNFDFK-KMQLWFGITVLLGAGFLGLEIYEFNEYVHEGHKFTTSAFAS 138 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 +F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 139 AFYTLVGTHGSHVAFGLLWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWVFIFTV 198 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 199 VYLMGMV 205 >gi|294498140|ref|YP_003561840.1| cytochrome c oxidase subunit III [Bacillus megaterium QM B1551] gi|295703491|ref|YP_003596566.1| cytochrome c oxidase subunit III [Bacillus megaterium DSM 319] gi|294348077|gb|ADE68406.1| cytochrome c oxidase, subunit III [Bacillus megaterium QM B1551] gi|294801150|gb|ADF38216.1| cytochrome c oxidase, subunit III [Bacillus megaterium DSM 319] Length = 206 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 1/187 (0%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ + GFW++L + ++FA F TY L + +GP P ++FDI +F +T++LL Sbjct: 20 TLEGKNKFTGFWLFLGGETVLFASLFATYLALRNSTMSGPKPEELFDIKLVFAATMILLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +AM K WL VT G+ F+ +EIYEF H + SAF S Sbjct: 80 SSLTSVYAMYHMKNFEFK-KMQLWLGVTWLLGLAFLGLEIYEFRHYVHEGHTFTSSAFGS 138 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 SF+ALVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 139 SFYALVGTHGAHVTFGLLWIGSLMIRNAKRGLNLYNAPKYYVASLYWHFIDVVWVFIFTV 198 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 199 VYLMGMV 205 >gi|251790655|ref|YP_003005376.1| cytochrome o ubiquinol oxidase subunit III [Dickeya zeae Ech1591] gi|247539276|gb|ACT07897.1| cytochrome o ubiquinol oxidase, subunit III [Dickeya zeae Ech1591] Length = 204 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 99/194 (51%), Positives = 129/194 (66%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSDC++F + F TYAVL A GP ++FD+ + V Sbjct: 12 AHAEHGHHDTGATKVFGFWIYLMSDCILFGMLFATYAVLVNGTAGGPTGKELFDLKFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ AM+A K + +WL +T FG++FI MEIYEF HLI+ A P Sbjct: 72 ETFALLFSSITYGMAMIA-MNKGNKSQVNAWLGLTFLFGLVFIGMEIYEFHHLIAEGAGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALVG HG+HV GLIW+ V++IQ+ K GL S N+ RL+CLS+FWHFLD++ Sbjct: 131 DRSAFLSAFFALVGTHGIHVTSGLIWIAVMMIQVSKFGLTSTNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 191 WICVFTVVYLMGAM 204 >gi|183601052|ref|ZP_02962545.1| hypothetical protein PROSTU_04674 [Providencia stuartii ATCC 25827] gi|188019391|gb|EDU57431.1| hypothetical protein PROSTU_04674 [Providencia stuartii ATCC 25827] Length = 204 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 89/197 (45%), Positives = 121/197 (61%), Gaps = 3/197 (1%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 L + + GFW+Y+MSD ++FA F TY VL A GP D+F +S Sbjct: 11 LAHAEHGHHDAGGTK--VFGFWLYIMSDLILFACLFATYVVLADGTAGGPEGKDIFSLSF 68 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + T +LL SS++ FAMLA + I WL VT G+ F+IME+YEF LI+ Sbjct: 69 VLGETFLLLFSSITYGFAMLAMHKGK-IASVNLWLFVTFLLGLGFVIMEVYEFHELIAEG 127 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 P RS FLS FF LV HG+HV GL+W+ +++IQ+ ++GL NQ RL CLS+FWHFL Sbjct: 128 YGPDRSGFLSGFFTLVATHGIHVTCGLVWIIIMIIQVSRRGLTEVNQTRLNCLSLFWHFL 187 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVF+ VYL+G + Sbjct: 188 DVVWICVFTVVYLLGAI 204 >gi|327192584|gb|EGE59532.1| cytochrome c oxidase protein, subunit III [Rhizobium etli CNPAF512] Length = 292 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y + Sbjct: 81 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPNEAIQASRMAYTGGVWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L +T G++F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLTLTVLLGILFSSVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +++ L+ Sbjct: 201 AYEYAH---APFDFKNSIYGATFFMATGFHGFHVLVGTIFLLVCLLRALRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|14602392|ref|NP_148770.1| cytochrome c oxidase subunit III [Trachurus japonicus] gi|14588626|dbj|BAB61817.1| cytochrome c oxidase subunit III [Trachurus japonicus] gi|14588640|dbj|BAB61830.1| cytochrome c oxidase subunit III [Trachurus japonicus] Length = 261 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGCWPPAGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIQSLGLTILLGGYFTCLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V ++ ++ S + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQVRHHFTSDHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|317097350|ref|YP_004123550.1| cytochrome c oxidase subunit III [Cynoglossus abbreviatus] gi|254763719|gb|ACT80249.1| cytochrome c oxidase subunit III [Cynoglossus abbreviatus] Length = 261 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G ++++S+ L FA FF + AG P++ F Sbjct: 68 QGHHTGPVQKGLRYGMILFIISEILFFAGFFWAFYHSSLAPTPELGGIWPPAGITPLNPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + L +T G+ F +++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMAGYRKPA-IHALFLTISLGLYFTLLQALEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L + +++ + + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLLICLLRQINYHFTPTHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|209548213|ref|YP_002280130.1| cytochrome-c oxidase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533969|gb|ACI53904.1| Cytochrome-c oxidase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 292 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y +L Sbjct: 81 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLYPNEAIQASRLLYTGGTWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L +T G+ F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLTLTVLLGIFFSSVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +I+ L+ Sbjct: 201 AYEYAH---APFAFKNSIYGATFFMATGFHGFHVLIGTIFLLVCLIRSLRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|58372104|ref|YP_194930.1| cytochrome c oxidase subunit III [Trachurus trachurus] gi|38603501|dbj|BAD02884.1| cytochrome c oxidase subunit III [Trachurus trachurus] Length = 261 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGCWPPAGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIQSLALTILLGGYFTCLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V ++ ++ S + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQVRHHFTSDHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|240266445|ref|YP_002970797.1| cytochrome c oxidase subunit III [Cynoglossus semilaevis] gi|164519771|gb|ABY59940.1| cytochrome c oxidase subunit 3 [Cynoglossus semilaevis] gi|254763705|gb|ACT80236.1| cytochrome c oxidase subunit III [Cynoglossus semilaevis] Length = 261 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G ++++S+ L FA FF + AG P++ F Sbjct: 68 QGHHTGPVQKGLRYGMILFIISEVLFFAGFFWAFYHSSLAPTPELGGIWPPAGITPLNPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + R + L +T G F +++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMAGRRKPA-IHALFLTISLGFYFTLLQALEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ + + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRQINYHFTPTHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|71082838|ref|YP_265557.1| cytochrome-c oxidase [Candidatus Pelagibacter ubique HTCC1062] gi|71061951|gb|AAZ20954.1| cytochrome-c oxidase [Candidatus Pelagibacter ubique HTCC1062] Length = 262 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 9/197 (4%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA------VLGKNYAAGPAPIDVFDI 71 + V G +++ S+ + F +F Y L P I FD Sbjct: 68 HQGHHTPVVQIHHRYGMTLFIASEVMFFVAWFWAYFDASLFPSLAIGGIWPPKDIVTFDP 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 I + ++LL S + + + + L++T G F ++++YE+ H Sbjct: 128 WDIPLINTLILLLSGTTVTWSHHALLEGDRKSFIQGLVLTVILGFSFSLLQVYEYQH--- 184 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + + S F+ G HG HV G I+L V +++ K + + +WH Sbjct: 185 ATFDFAGNIYGSVFYMATGFHGFHVIIGTIFLAVCLMRARKGHFTEKHHFGFEAAAWYWH 244 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ +F+ +Y+ G Sbjct: 245 FVDVVWLFLFAAIYIWG 261 >gi|38707485|ref|NP_944639.1| cytochrome c oxidase subunit III [Eschrichtius robustus] gi|38602452|emb|CAD87916.1| cytochrome c oxidase polypeptide III [Eschrichtius robustus] Length = 261 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPPPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGTTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|114052891|ref|YP_740286.1| cytochrome c oxidase subunit III [Lacerta viridis viridis] gi|113926823|emb|CAJ45052.1| cytochrome oxidase subunit III [Lacerta viridis viridis] Length = 261 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + + G G +++ S+ L F FF + P ++ + Sbjct: 66 TYQGQHTTPVQKGLRYGMILFITSEVLFFVGFFWAFYHSSLAPTPELGNQWPPTGVEPLN 125 Query: 71 -ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++T VLL S ++ ++A A + + L +T G+ F I++ E+ Sbjct: 126 AFEVPLLNTAVLLASGVTVTWAHHALMEGKRKD-MIQALTLTILLGLYFTILQATEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 S + ++FF G HGLHV G +L V +I+ L + + + + Sbjct: 183 -EAPFTISDSVYGATFFVATGFHGLHVIIGSTFLLVCLIRQLLHHFTTKHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|91762739|ref|ZP_01264704.1| cytochrome-c oxidase [Candidatus Pelagibacter ubique HTCC1002] gi|91718541|gb|EAS85191.1| cytochrome-c oxidase [Candidatus Pelagibacter ubique HTCC1002] Length = 262 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 9/197 (4%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA------VLGKNYAAGPAPIDVFDI 71 + V G +++ S+ + F +F Y L P I FD Sbjct: 68 HQGHHTPVVQIHHRYGMTLFIASEVMFFVAWFWAYFDASLFPSLAIGGIWPPKDIVTFDP 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 I + ++LL S + + + + L++T G F ++++YE+ H Sbjct: 128 WDIPLINTLILLLSGTTVTWSHHALLEGDRKSFIQGLVLTVILGFSFSLLQVYEYQH--- 184 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + + S F+ G HG HV G I+L V +++ K + + +WH Sbjct: 185 ATFDFAGNIYGSVFYMATGFHGFHVIIGTIFLAVCLMRARKGHFTEEHHFGFEAAAWYWH 244 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ +F+ +Y+ G Sbjct: 245 FVDVVWLFLFAAIYIWG 261 >gi|322834053|ref|YP_004214080.1| cytochrome o ubiquinol oxidase, subunit III [Rahnella sp. Y9602] gi|321169254|gb|ADW74953.1| cytochrome o ubiquinol oxidase, subunit III [Rahnella sp. Y9602] Length = 204 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 95/194 (48%), Positives = 123/194 (63%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSDC++FA F TYAVL A GP+ D+F++ + V Sbjct: 12 AHAEHGHHDAGATKVFGFWIYLMSDCILFASLFATYAVLVNGTAGGPSGKDIFELPFVLV 71 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T LL SS++ FAML K WL +T FG+ FI ME+YEF HLI+ P Sbjct: 72 ETFCLLFSSITYGFAML-GMNKGNKAAVNGWLFLTFLFGLGFIGMELYEFHHLIAEGYGP 130 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 QRS FLS FFALV HGLHV GLIW+ +++Q+ ++GL N+ RL+CLS+FWHFLD++ Sbjct: 131 QRSGFLSGFFALVATHGLHVTCGLIWILTMMVQVSRRGLTEVNKTRLMCLSLFWHFLDVV 190 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 191 WICVFTVVYLMGAM 204 >gi|190890673|ref|YP_001977215.1| cytochrome c oxidase, subunit III [Rhizobium etli CIAT 652] gi|190695952|gb|ACE90037.1| cytochrome c oxidase protein, subunit III [Rhizobium etli CIAT 652] Length = 292 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y + Sbjct: 81 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPNEAIQASRLAYTGGVWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L +T G++F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLTLTVLLGILFSSVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +++ L+ Sbjct: 201 AYEYAH---APFDFKNSIYGATFFMATGFHGFHVLVGTIFLAVCLLRALRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|25057822|ref|NP_740055.1| cytochrome c oxidase subunit III [Carangoides armatus] gi|25006061|dbj|BAC23676.1| cytochrome c oxidase subunit III [Carangoides armatus] Length = 261 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGCWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIQSLALTILLGGYFTCLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V ++ ++ S + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQVRHHFTSDHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|297593526|gb|ADI47480.1| cytochrome oxidase subunit III [Xiphias gladius] Length = 261 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQAMEYN-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQVRHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|86356602|ref|YP_468494.1| cytochrome-c oxidase, subunit III protein [Rhizobium etli CFN 42] gi|86280704|gb|ABC89767.1| cytochrome-c oxidase, subunit III protein [Rhizobium etli CFN 42] Length = 292 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y + Sbjct: 81 AHEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPNEAIQASRMAYTGGVWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + V L +T G++F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLVQGLTLTVLLGILFSSVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +++ L+ Sbjct: 201 AYEYAH---APFDFKNSIYGATFFMATGFHGFHVLVGTIFLLVCLLRALRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|229490418|ref|ZP_04384259.1| cytochrome c oxidase subunit 3 [Rhodococcus erythropolis SK121] gi|229322708|gb|EEN88488.1| cytochrome c oxidase subunit 3 [Rhodococcus erythropolis SK121] Length = 298 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 2/177 (1%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAA-GPAPIDVFDISGIFVSTIVLLLSSLSCSF 90 +G ++L S+ + FA F Y V P ++ T+VL+ SS +C Sbjct: 122 VGTIVWLSSELMFFAGLFAMYFVARAQANGNWPPEPTELNLYLAVPVTLVLIASSFTCQM 181 Query: 91 AMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVG 150 + A+ + W +T G F+ + YE+ HL+ S + S F+ G Sbjct: 182 GVFAAERGD-VFGLRRWYTITLVMGAFFVAGQGYEYYHLVHEGTTISSSVYGSVFYMTTG 240 Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207 HGLHV GLI L+ + I +S +WHF+D++WI +F+ +Y + Sbjct: 241 FHGLHVIGGLIAFVFLIARTRVSKFTPAQATAAIVVSYYWHFVDIVWIALFATIYFI 297 >gi|241203394|ref|YP_002974490.1| cytochrome-c oxidase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857284|gb|ACS54951.1| Cytochrome-c oxidase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 292 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y +L Sbjct: 81 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLYPNEAIQASRLLYTGGTWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L +T G+ F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLTLTVLLGIFFSSVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +I+ L+ Sbjct: 201 AYEYAH---APFAFKNSIYGATFFMATGFHGFHVLVGTIFLAVCLIRALRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|238866869|ref|YP_002929341.1| cytochrome c oxidase subunit III [Perodicticus potto] gi|238809404|dbj|BAH69227.1| cytochrome c oxidase subunit III [Perodicticus potto] Length = 261 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L FA FF ++ P I+ + Sbjct: 68 QGHHTPTVQKGLRYGMVLFIISEVLFFAGFFWSFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H T L +T G+ F +++ E+ + Sbjct: 128 EVPLLNTAVLLASGVSITWAHHSLMENNRKHMT-QALSITIALGLYFTLLQASEY---LE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ L + + +WH Sbjct: 184 TSFTISDGVYGSTFFMATGFHGLHVIIGSTFLTVCLLRQLNFHFTPNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|170724798|ref|YP_001758824.1| cytochrome o ubiquinol oxidase subunit III [Shewanella woodyi ATCC 51908] gi|169810145|gb|ACA84729.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella woodyi ATCC 51908] Length = 215 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 93/195 (47%), Positives = 130/195 (66%), Gaps = 1/195 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + E + T GFW+YLM+DC++FA F TYAVL N G + D+F+++ + Sbjct: 22 HATSHDEHHDTSENTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFELNFVL 81 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 + T LL+SS++ FA++ + + T+ WLL+T G FI MEIYEF HLI Sbjct: 82 IETAALLVSSITFGFALICAK-HQKKAATLGWLLITFALGCAFIGMEIYEFHHLIEHGNG 140 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 PQRSAFLSSFFALVG+HGLHV GL+W+ +++ ++LK GL + RL CLS+FWHFLD+ Sbjct: 141 PQRSAFLSSFFALVGMHGLHVTAGLVWMAIMMFEVLKTGLNKRSITRLGCLSLFWHFLDI 200 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYL+G + Sbjct: 201 VWICVFTVVYLLGAM 215 >gi|32894346|gb|AAP90927.1| cytochrome c oxidase subunit III [Homo sapiens] gi|32894360|gb|AAP90940.1| cytochrome c oxidase subunit III [Homo sapiens] gi|309754543|gb|ACR38958.2| cytochrome c oxidase subunit III [Homo sapiens] Length = 261 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPID 67 + G G +++ S+ L FA FF + G P++ Sbjct: 66 TYQGHHTPPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + ++ + LL+T G+ F +++ E+ Sbjct: 126 PLEVP--LLNTSVLLASGVSITWAHHSLMENN-RNQMIQALLITILLGLYFTLLQASEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L + I+ L S + + Sbjct: 182 --FESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|71010008|dbj|BAE12272.1| cytochrome oxydase subunit III [Homo sapiens] gi|71015167|dbj|BAE14027.1| cytochrome oxydase subunit III [Homo sapiens] gi|171452878|dbj|BAG14841.1| cytochrome oxydase subunit III [Homo sapiens] gi|189179177|dbj|BAG38999.1| cytochrome c oxidase subunit III [Homo sapiens] gi|229503553|gb|ACQ75913.1| cytochrome c oxidase subunit III [Homo sapiens] gi|309756277|gb|ACF10369.2| cytochrome c oxidase subunit III [Homo sapiens] Length = 261 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPID 67 + G G +++ S+ FA F + G P++ Sbjct: 66 TYQGHHTPPVQKGLRYGMILFITSEVFFFAGLFWAFYHSSLAPTPQLGGHWPPTGITPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + ++ + LL+T G+ F +++ E+ Sbjct: 126 PLEVP--LLNTSVLLASGVSITWAHHSLMENN-RNQMIQALLITILLGLYFTLLQASEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L + I+ L S + + Sbjct: 182 --FESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|145315463|gb|ABP63021.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L FA FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFAGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|229918866|ref|YP_002887526.1| cytochrome c oxidase subunit III [Xiphias gladius] gi|229619873|dbj|BAH58233.1| cytochrome c oxidase subunit III [Xiphias gladius] Length = 261 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQAMEYN-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQVRHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|297593524|gb|ADI47479.1| cytochrome oxidase subunit III [Istiophorus albicans] Length = 261 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQAVEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + L + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGLEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|5835073|ref|NP_008154.1|COX3_10512 cytochrome c oxidase subunit III [Petromyzon marinus] gi|3121908|sp|Q35539|COX3_PETMA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|515492|gb|AAB08744.1| cytochrome oxidase subunit III [Petromyzon marinus] Length = 261 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 9/195 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYA----AGPAPIDVFDISG 73 + G G ++++S+ FA FF + A L P I+ + Sbjct: 69 GHHTSPVQQGLRYGMILFIISEVCFFAGFFWAFYHASLAPTPELGLTWPPTGINPLNPFE 128 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + + +LL+S S T++ +T L +T G+ F ++I E+ Sbjct: 129 VPLLNTAVLLASGVSVTWAHHSITEKNRTETTQALTLTVLLGLYFTALQIMEY---YETP 185 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 + S+FF G HGLHV G ++L +++ L+ S + + +WHF+ Sbjct: 186 FTMADGVYGSTFFVATGFHGLHVIIGSLFLLTCLLRHLQYHFTSKHHFGFEAAAWYWHFV 245 Query: 194 DLIWICVFSFVYLMG 208 D++W+ ++ +Y G Sbjct: 246 DVVWLFLYISIYWWG 260 >gi|189182383|gb|ACD81901.1| cytochrome c oxidase subunit III [Ophisaurus attenuatus] Length = 261 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPID-----VFDI 71 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPPVQTGLRYGMLLFIVSEVLFFIGFFWAFYHSSLAPTPELGGQWPPNGISALSPF 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + T LL+T G+ F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWAHHSIMEGHQKEAT-QALLLTITLGLYFTALQAMEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +I+ +K + + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVMIGSSFLLVCLIRQIKHHFTTQHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|222052785|dbj|BAH16249.1| cytochrome oxydase subunit III [Homo sapiens] Length = 262 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPID 67 + G G +++ S+ FA F + G P++ Sbjct: 66 TYQGHHTPPVQKGLRYGMILFITSEVFFFAGLFWAFYHSSLAPTPQLGGHWPPTGITPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + ++ + LL+T G+ F +++ E+ Sbjct: 126 PLEVP--LLNTSVLLASGVSITWAHHSLMENN-RNQMIQALLITILLGLYFTLLQASEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L + I+ L S + + Sbjct: 182 --FESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|229919622|ref|YP_002887539.1| cytochrome c oxidase subunit III [Tetrapturus audax] gi|229922366|ref|YP_002887552.1| cytochrome c oxidase subunit III [Tetrapturus angustirostris] gi|229619887|dbj|BAH58246.1| cytochrome c oxidase subunit III [Tetrapturus audax] gi|229619901|dbj|BAH58259.1| cytochrome c oxidase subunit III [Tetrapturus angustirostris] gi|297593518|gb|ADI47476.1| cytochrome oxidase subunit III [Tetrapturus audax] gi|297593522|gb|ADI47478.1| cytochrome oxidase subunit III [Tetrapturus albidus] Length = 261 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQALEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|197284018|ref|YP_002149890.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis HI4320] gi|227358112|ref|ZP_03842453.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis ATCC 29906] gi|194681505|emb|CAR40377.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis HI4320] gi|227161448|gb|EEI46485.1| cytochrome O ubiquinol oxidase subunit III [Proteus mirabilis ATCC 29906] Length = 203 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + GFWIYLMSD ++FA F TYAVL A GP+ ++F + + V Sbjct: 11 AHEHHGHHDAGATKVFGFWIYLMSDLILFASLFATYAVLVNGIADGPSGKEIFSLPFVLV 70 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ FAML+ K + + WL VT FG+ F++ME+YEF LI+ P Sbjct: 71 ETFLLLFSSITFGFAMLS-MNKGSVSQVNLWLFVTFLFGLGFVVMEVYEFHELIAEGYGP 129 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RSAFLS+FFALV HGLHV GL+W+ +++IQ+ ++GL N+ RL CLS+FWHFLD++ Sbjct: 130 DRSAFLSAFFALVSTHGLHVTAGLVWIIIMMIQVSRRGLTDVNRTRLSCLSLFWHFLDVV 189 Query: 197 WICVFSFVYLMGVV 210 WICVF+ VYLMG + Sbjct: 190 WICVFTVVYLMGAM 203 >gi|229918838|ref|YP_002887500.1| cytochrome c oxidase subunit III [Makaira indica] gi|229918852|ref|YP_002887513.1| cytochrome c oxidase subunit III [Istiophorus platypterus] gi|229924019|ref|YP_002887565.1| cytochrome c oxidase subunit III [Makaira mazara] gi|229619802|dbj|BAH58285.1| cytochrome c oxidase subunit III [Makaira indica] gi|229619816|dbj|BAH58298.1| cytochrome c oxidase subunit III [Istiophorus platypterus] gi|229619915|dbj|BAH58272.1| cytochrome c oxidase subunit III [Makaira mazara] Length = 261 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQAVEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|297593514|gb|ADI47474.1| cytochrome oxidase subunit III [Tetrapturus pfluegeri] Length = 261 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVP--LLNTAVLPASGVTVTWAYHSIMEAK-RKQAIQSLALTILLGAYFTFLQALEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++F G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFSVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|254234441|ref|ZP_04927764.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa C3719] gi|126166372|gb|EAZ51883.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas aeruginosa C3719] Length = 209 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 94/193 (48%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + T GFW+YLM+DC++FA F TYAVL + A GP+ D+F++ + V Sbjct: 18 HDHDHAHDSGGNTVFGFWLYLMTDCVLFASVFATYAVLVHHTAGGPSGKDIFELPYVLVE 77 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL+SS + AML++ + ++WL VT G FI MEI EF HLI+ P Sbjct: 78 TAILLVSSCTYGLAMLSAHKGA-KGQAIAWLGVTFLLGAAFIGMEINEFHHLIAEGFGPS 136 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFF LVG+HGLHV GL+W+ VL+ QI +GL + N R++CLS+FWHFLD++W Sbjct: 137 RSAFLSSFFTLVGMHGLHVSAGLLWMLVLMAQIWTRGLTAQNNTRMMCLSLFWHFLDMVW 196 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VY+MG + Sbjct: 197 ICVFTVVYMMGAL 209 >gi|11055636|gb|AAG28183.1|AF304200_7 COIII [Sus scrofa] gi|11055664|gb|AAG28209.1|AF304202_7 COIII [Sus scrofa] gi|33320690|gb|AAQ05986.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320704|gb|AAQ05999.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320718|gb|AAQ06012.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320746|gb|AAQ06038.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320760|gb|AAQ06051.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320774|gb|AAQ06064.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320788|gb|AAQ06077.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320802|gb|AAQ06090.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320816|gb|AAQ06103.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320830|gb|AAQ06116.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320858|gb|AAQ06142.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320872|gb|AAQ06155.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320900|gb|AAQ06181.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320914|gb|AAQ06194.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320928|gb|AAQ06207.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320942|gb|AAQ06220.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320956|gb|AAQ06233.1| cytochrome oxidase subunit III [Sus scrofa] gi|157144252|dbj|BAF80077.1| cytochrome oxidase subunit III [Sus scrofa] Length = 278 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|297593512|gb|ADI47473.1| cytochrome oxidase subunit III [Tetrapturus angustirostris] Length = 261 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQALEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|5836037|ref|NP_008796.1|COX3_15103 cytochrome c oxidase subunit III [Hippopotamus amphibius] gi|6647505|sp|Q9ZZY5|COX3_HIPAM RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|4127870|emb|CAA09434.1| COIII [Hippopotamus amphibius] Length = 261 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPVVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALFITIALGVYFTLLQASEYH---EA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 SFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSDHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|5835589|ref|NP_008438.1|COX3_13974 cytochrome c oxidase subunit III [Pelomedusa subrufa] gi|5921878|sp|O79676|COX3_PELSU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|3599983|gb|AAD05056.1| cytochrome oxidase subunit III [Pelomedusa subrufa] Length = 261 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + + G +++ S+ L F FF + G P++ F Sbjct: 68 QGHHTPSVQNNLRYGMILFITSEILFFTGFFWAFYHSSLSPTAELGNIWPPTGITPLNPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + +T+ L +T G F I++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTITWAHHSLMEGN-RPQTLQALTLTIILGTYFTILQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 S + S+FF G HGLHV G +L V +++ LK S + + + Sbjct: 182 FEASFTIADSIYGSTFFVATGFHGLHVIIGSTFLIVCLMRQLKYHFTSHHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D+IW+ ++ +Y G Sbjct: 242 WHFVDVIWLFLYLSIYWWG 260 >gi|297593520|gb|ADI47477.1| cytochrome oxidase subunit III [Makaira nigricans] Length = 261 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVPP--LNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQALEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|223972324|dbj|BAH23360.1| cytochrome oxidase subunit III [Hippopotamus amphibius] Length = 261 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 78/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPVVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKQMLQALFITIALGVYFTLLQASEYH---EA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 SFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSDHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|307579656|gb|ADN63625.1| cytochrome O ubiquinol oxidase subunit III [Xylella fastidiosa subsp. fastidiosa GB514] Length = 194 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 103/195 (52%), Positives = 130/195 (66%), Gaps = 2/195 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + +D D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + Sbjct: 2 HNRDHAHHDT-GDNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVL 60 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SSL+ FAM+A+ + I WL+VTA FG+ F+ ME+YEF HLI A Sbjct: 61 VETFLLLFSSLTFGFAMIAAHKRH-IPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAG 119 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RSAFLS+FF LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFLD+ Sbjct: 120 PGRSAFLSAFFTLVGTHGLHVASGLLWMLILVIQIVKNGLTPRNSTRLACLSLFWHFLDV 179 Query: 196 IWICVFSFVYLMGVV 210 IWI VF+ VYL+G + Sbjct: 180 IWIGVFTIVYLLGAL 194 >gi|116250799|ref|YP_766637.1| cytochrome c oxidase polypeptide III (cytochrome aa3 subunit 3) [Rhizobium leguminosarum bv. viciae 3841] gi|115255447|emb|CAK06523.1| putative cytochrome c oxidase polypeptide III (cytochrome aa3 subunit 3) [Rhizobium leguminosarum bv. viciae 3841] Length = 292 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y +L Sbjct: 81 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLYPNEAIQASRLLYTGGTWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L +T GM F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLTLTVLLGMFFSAVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +I+ L+ Sbjct: 201 AYEYAH---APFAFKSSIYGATFFMATGFHGFHVLVGTIFLAVCLIRALRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|307545743|ref|YP_003898222.1| cytochrome O ubiquinol oxidase subunit III [Halomonas elongata DSM 2581] gi|307217767|emb|CBV43037.1| cytochrome o ubiquinol oxidase subunit III [Halomonas elongata DSM 2581] Length = 204 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 95/198 (47%), Positives = 125/198 (63%), Gaps = 2/198 (1%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + + GFW+YLMSD ++F F TYAVL + A GP P +VF++ Sbjct: 9 HEGHAHEHDHHDTAGT-KVFGFWVYLMSDLVIFGSLFATYAVLLRGTAGGPTPGEVFELP 67 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 I V T +LL SS + A+LA + + +WL +T G F+ ME+YEF HLI Sbjct: 68 FILVETFLLLFSSFTYGMAVLA-MNANRVGQIKAWLAITFLLGAAFVGMEVYEFQHLIHE 126 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RSAFLS+FF LVG HGLHV FGLIW+ V++IQ+ KGL + R++CLS+FWHF Sbjct: 127 GFGPDRSAFLSAFFTLVGTHGLHVTFGLIWILVMLIQLQTKGLTDMTRPRIMCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVFSFVYLMGV+ Sbjct: 187 LDIVWICVFSFVYLMGVL 204 >gi|163857710|ref|YP_001632008.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii DSM 12804] gi|163261438|emb|CAP43740.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii] Length = 208 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 108/197 (54%), Positives = 141/197 (71%), Gaps = 4/197 (2%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 FY+ ++ +GT LGFW+Y+MSDCL+FA F TY VLG+NY GP D+F++ Sbjct: 15 QFYLTEEHH---VKNGTLLGFWVYVMSDCLIFACLFATYGVLGRNYDGGPTGADLFELPL 71 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + ++T +LLLSS++ FA+L R + + WL VT G F+ +EIYEFAHLI+ Sbjct: 72 VALNTSLLLLSSITYGFALLQGRKGR-VGSLLGWLAVTGLLGAGFLGLEIYEFAHLIAEG 130 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 A PQRSAFLS+FF LVG HGLHV FGL+WL VL++QI GLI N+RRL+CLSMFWHFL Sbjct: 131 AGPQRSAFLSAFFTLVGTHGLHVTFGLVWLVVLMVQIGMHGLIIPNKRRLMCLSMFWHFL 190 Query: 194 DLIWICVFSFVYLMGVV 210 D++WI VF+ VYLMGV+ Sbjct: 191 DVVWIGVFTVVYLMGVL 207 >gi|57013984|ref|YP_173456.1| cytochrome oxidase subunit 3 [Nicotiana tabacum] Length = 265 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDIS 72 + + V G GF ++++S+ + F F +++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGFILFIVSEVMFFFALFRASSHSSLAPTVEIGGIWPPKGIAVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T++ L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTLIPLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G I+ + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTIFSIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|16357353|ref|NP_443664.1| cytochrome c oxidase subunit III [Mastacembelus favus] gi|16267261|dbj|BAB70384.1| cytochrome c oxidase subunit III [Mastacembelus favus] Length = 261 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G P++ F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGSWPPTGITPLNPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F +++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMERE-RKQAIQALTLTILLGFYFTLLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ ++ S + + + Sbjct: 182 YEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLTVCLLRQIRYHFTSEHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|145315505|gb|ABP63060.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|45826204|gb|AAS77723.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|317097276|ref|YP_004123471.1| cytochrome c oxidase subunit III [Procapra przewalskii] gi|284176543|gb|ADB81009.1| cytochrome c oxidase subunit 3 [Procapra przewalskii] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + ++ + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNQMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|251799268|ref|YP_003013999.1| cytochrome-c oxidase [Paenibacillus sp. JDR-2] gi|247546894|gb|ACT03913.1| Cytochrome-c oxidase [Paenibacillus sp. JDR-2] Length = 205 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 1/193 (0%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 + +++ ++ LGFW++L ++ ++F F + L GP ++F++ + ++ Sbjct: 13 HEPEKATLEGRNKILGFWLFLGAETVLFGTLFSAFLALRDQVLDGPKSQELFELPLVALA 72 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +LL SSL+ FA A +++ V WL+VT G+ F+ +EIYEF++ + Sbjct: 73 TGLLLTSSLTSVFATQALHQQKVK-AMVWWLVVTVILGLGFLGLEIYEFSNYVHEGHGFT 131 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 SAF SSF+ LVG HG HV FG++W+ +L+ Q+LKKGL + ++WHF+D++W Sbjct: 132 TSAFSSSFYTLVGFHGAHVAFGIVWISLLIGQLLKKGLTVTTAPKAYVAGIYWHFIDVVW 191 Query: 198 ICVFSFVYLMGVV 210 + +F+ VYLMG V Sbjct: 192 VFIFTVVYLMGKV 204 >gi|94314710|ref|YP_587919.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus metallidurans CH34] gi|93358562|gb|ABF12650.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus metallidurans CH34] Length = 226 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 94/192 (48%), Positives = 124/192 (64%), Gaps = 1/192 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + D + V T LGFW+YLMSDCL+FAV F T+ VL N A GP ++FD+ + Sbjct: 31 HGHDGHDDHVVQSRTTLGFWLYLMSDCLIFAVLFATFGVLVNNTAGGPGGRELFDLRFVL 90 Query: 76 VSTIVLLLSSLSCSFAMLASATKR-LIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 T++LL SSL+ AM+ + ++ + W+++T G F+ MEI+EF LI A Sbjct: 91 GETMLLLTSSLTFGVAMIKLEDGKANPNQVIRWIVLTFALGAAFVGMEIFEFMELIHEGA 150 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 P RSA+LS+FF LVG HGLHV GL+W+ V+V QI GL +RRL CLS+FWHFLD Sbjct: 151 GPGRSAYLSAFFMLVGTHGLHVTAGLLWIIVMVHQIQVFGLDGIVRRRLACLSLFWHFLD 210 Query: 195 LIWICVFSFVYL 206 L+WICVFS VYL Sbjct: 211 LVWICVFSIVYL 222 >gi|38707555|ref|NP_944665.1| cytochrome c oxidase subunit III [Kogia breviceps] gi|38602480|emb|CAD87942.1| cytochrome c oxidase polypeptide III [Kogia breviceps] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMVLFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + LLVT G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMQGDRKHMLQALLVTILLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V +++ +K S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCLLRQMKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|83779138|gb|ABC47382.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVCFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVTIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|11055678|gb|AAG28222.1|AF304203_7 COIII [Sus scrofa] gi|3928504|emb|CAA05235.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320732|gb|AAQ06025.1| cytochrome oxidase subunit III [Sus scrofa] gi|33320844|gb|AAQ06129.1| cytochrome oxidase subunit III [Sus scrofa] gi|157056432|gb|ABV02134.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166107|gb|ACI41486.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166121|gb|ACI41499.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166135|gb|ACI41512.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166149|gb|ACI41525.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166163|gb|ACI41538.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166177|gb|ACI41551.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166191|gb|ACI41564.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166205|gb|ACI41577.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166219|gb|ACI41590.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166233|gb|ACI41603.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166247|gb|ACI41616.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166261|gb|ACI41629.1| cytochrome oxidase subunit III [Sus scrofa] gi|209166275|gb|ACI41642.1| cytochrome oxidase subunit III [Sus scrofa] Length = 267 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|45826190|gb|AAS77710.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTTILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APLTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|29570648|ref|NP_818910.1| cytochrome c oxidase subunit III [Eigenmannia sp. CBM-ZF-10620] gi|29501129|dbj|BAC67487.1| cytochrome oxidase subunit 3 [Eigenmannia sp. CBM-ZF-10620] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD-I 71 + G G +++ S+ L FA FF + P I + + Sbjct: 68 QGHHTLPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPM 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + L++T G F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWAHHSLMEGE-RKQAIQALILTILLGFYFTALQAMEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + +++ ++ S + + +WH Sbjct: 184 APFTIADGIYGSTFFVATGFHGLHVIIGSSFLAICLLRQIQYHFTSEHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|109897617|ref|YP_660872.1| cytochrome c oxidase, subunit III [Pseudoalteromonas atlantica T6c] gi|109699898|gb|ABG39818.1| cytochrome bo3 quinol oxidase subunit 3 [Pseudoalteromonas atlantica T6c] Length = 214 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 96/193 (49%), Positives = 132/193 (68%), Gaps = 3/193 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D+ T GFW+YLM+DC++FA F TYAVL N G + D+FD++ + V Sbjct: 25 HDEHHDTGG--NTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVSGKDIFDLNFVLVE 82 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LL+SS++ FA+L + ++ T+ WLLVT G +FI ME+YEF HLI P Sbjct: 83 TAALLVSSITYGFALLCAHKQQ-RAGTLLWLLVTMALGCVFIAMEVYEFHHLIVEGNGPD 141 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLSSFFALVG+HGLHV GL+W+ V+V+++LK+GL + RL CLS+FWHFLD++W Sbjct: 142 RSAFLSSFFALVGMHGLHVTAGLVWMLVMVLEVLKRGLGAQTVTRLGCLSLFWHFLDIVW 201 Query: 198 ICVFSFVYLMGVV 210 +CVF+ VYL+G + Sbjct: 202 VCVFTVVYLLGAM 214 >gi|145315617|gb|ABP63164.1| cytochrome c oxidase subunit III [Sus scrofa] gi|162423274|gb|ABX89415.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H T+ L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-TIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|62086643|dbj|BAD91739.1| cytochrome c oxidase subunit III [Eschrichtius robustus] Length = 261 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGTTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|225427|prf||1303229B cytochrome oxidase III Length = 265 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + V G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKVVQLGLRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +LL S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILLSSEAAATWAHHAILAGKEK-RAVYALVATVSLAIVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+F+ G HG HV G ++ + I+ L + + +WH Sbjct: 187 APPTISDSIYGSTFYLATGFHGTHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ +F +Y G + Sbjct: 247 FVDVVWLFLFLSIYWWGGI 265 >gi|190576213|ref|YP_001974058.1| putative cytochrome o ubiquinol oxidase subunit III [Stenotrophomonas maltophilia K279a] gi|190014135|emb|CAQ47774.1| putative cytochrome o ubiquinol oxidase subunit III [Stenotrophomonas maltophilia K279a] Length = 211 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 88/178 (49%), Positives = 116/178 (65%), Gaps = 1/178 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 G W+YLMSD ++F F +YAVL YA GP ++F + + T +LL+SS++ A Sbjct: 34 FGMWVYLMSDLVLFGSLFASYAVLSTAYAGGPTGKELFSLPFVMAETFLLLVSSITYGQA 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +LA + WL VT G FI MEIYEF+HLI A P SA+LS+FFALV Sbjct: 94 VLAMHRHDTS-AVLRWLGVTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSAFFALVAT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 HGLHV GLIW+ V++ Q+ ++GL N R+ CLS+FWHFLDL+WICVF+FVYL+G Sbjct: 153 HGLHVASGLIWMAVVMHQVYRRGLTPTNITRVSCLSLFWHFLDLVWICVFTFVYLIGA 210 >gi|218661747|ref|ZP_03517677.1| cytochrome c oxidase protein, subunit III [Rhizobium etli IE4771] Length = 292 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y + Sbjct: 81 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLYPNEAIQASRLAYTGGVWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L +T G+ F ++ Sbjct: 141 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLTLTVLLGIFFSTVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +++ L+ Sbjct: 201 AYEYAH---APFAFKNSIYGATFFMATGFHGFHVLVGTIFLLVCLLRALRGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFCIYVWG 283 >gi|38707591|ref|NP_944730.1| cytochrome c oxidase subunit III [Pontoporia blainvillei] gi|38602550|emb|CAD88007.1| cytochrome c oxidase polypeptide III [Pontoporia blainvillei] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + V Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPVGIQPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGN-RKQMLQALSITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + ++ +K S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGTTFLIICFMRQMKFHFTSTHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|322422413|ref|YP_004221841.1| cytochrome c oxidase subunit III [Brachyhypopomus pinnicaudatus] gi|317176614|dbj|BAJ54421.1| cytochrome c oxidase subunit III [Brachyhypopomus pinnicaudatus] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L FA FF + G P+D F Sbjct: 68 QGHHTLPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPELGGCWPPTGIIPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSLMEGQ-RKQAIHALTLTILLGFYFTALQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ ++ S + + + Sbjct: 182 YEAPFTIADGIYGSTFFVATGFHGLHVIIGSTFLLVCLLRQIQYHFTSEHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|116733692|gb|ABK19903.1| cytochrome oxidase subunit 3 [Ichthyomyzon unicuspis] gi|116733694|gb|ABK19904.1| cytochrome oxidase subunit 3 [Ichthyomyzon unicuspis] gi|116733696|gb|ABK19905.1| cytochrome oxidase subunit 3 [Ichthyomyzon fossor] gi|116733698|gb|ABK19906.1| cytochrome oxidase subunit 3 [Ichthyomyzon fossor] gi|116733700|gb|ABK19907.1| cytochrome oxidase subunit 3 [Ichthyomyzon fossor] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 9/195 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYA----AGPAPIDVFDISG 73 + G G ++++S+ FA FF + A L + P I+ + Sbjct: 69 GHHTSPVQQGLRYGMILFIVSEVCFFAGFFWAFYHASLAPTHELGLTWPPTGINPLNPFE 128 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + + +LL+S S T++ +T L++T G+ F ++I E+ Sbjct: 129 VPLLNTAVLLASGVSVTWAHHSITEKNRMETTQALIMTILLGLYFTALQIMEYH---ETP 185 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 S + S+FF G HGLHV G ++L +++ ++ S + + +WHF+ Sbjct: 186 FTMADSVYGSTFFVATGFHGLHVIIGSMFLLTCLMRHMQYHFTSKHHFGFEAAAWYWHFV 245 Query: 194 DLIWICVFSFVYLMG 208 D++W+ ++ +Y G Sbjct: 246 DVVWLFLYISIYWWG 260 >gi|124358983|ref|YP_001023769.1| cytochrome c oxidase subunit III [Phacochoerus africanus] gi|88766367|gb|ABD49699.1| cytochrome c oxidase subunit III [Phacochoerus africanus] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALGITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|84386635|ref|ZP_00989661.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio splendidus 12B01] gi|84378441|gb|EAP95298.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio splendidus 12B01] Length = 205 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 96/204 (47%), Positives = 124/204 (60%), Gaps = 1/204 (0%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 +P+ + GFW+YLMSDC++FA F TYAVL AGP Sbjct: 3 ANTPSHTYDLAHSHDHHHEAAGNKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGK 62 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+F++ +FV T++LL SS++ F M+A K + W+ VT G+ FI ME+YEF Sbjct: 63 DIFELPFVFVETMMLLFSSITFGFGMIAMKRKD-VTGLKRWIKVTFALGLAFICMEVYEF 121 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI+ PQ SAFLS+FF LVG HGLHV FGLIW+ V Q+ KGL R CL Sbjct: 122 HHLIAEGYGPQESAFLSAFFTLVGTHGLHVTFGLIWMAVAYHQLSTKGLNDNMSMRFQCL 181 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 S+FWHFLD++WICVF+ VYLMGV+ Sbjct: 182 SLFWHFLDIVWICVFTIVYLMGVM 205 >gi|304407876|ref|ZP_07389527.1| cytochrome o ubiquinol oxidase, subunit III [Paenibacillus curdlanolyticus YK9] gi|304343359|gb|EFM09202.1| cytochrome o ubiquinol oxidase, subunit III [Paenibacillus curdlanolyticus YK9] Length = 206 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 115/180 (63%), Gaps = 2/180 (1%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+LM+D ++F F Y VL N A GP ++F + G+ T +LL SS + A Sbjct: 28 LGFWIFLMTDVIIFGCLFAVYVVLRNNTAGGPTAEELFKMPGVIAETFILLTSSFTSGLA 87 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA-VPQRSAFLSSFFALVG 150 +LA + ++ ++WL VTA G FI +E+YEF +++ E S FLS FF LVG Sbjct: 88 VLAMHAGK-KNQLITWLGVTAALGAAFIFLEVYEFVDMVNHEGATIATSGFLSGFFTLVG 146 Query: 151 LHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+W+ L++Q+ K+G+ +R++ LS++WHFLD++WI V + VYLMGV+ Sbjct: 147 THGLHVSIGLVWMIGLMLQLRKRGITPVTKRKVEVLSLYWHFLDVVWIFVLTVVYLMGVM 206 >gi|215399147|ref|YP_002332277.1| cytochrome c oxidase subunit III [Podarcis muralis] gi|62900864|gb|AAY18753.1| cytochrome c oxidase subunit III [Podarcis muralis] gi|213983295|gb|ACJ54978.1| cytochrome c oxidase subunit III [Podarcis muralis] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G G +++ S+ L FA FF + P ++ + Sbjct: 66 TYQGHHTMPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPELGGQWPPTGVNPLN 125 Query: 71 -ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++T VLL S ++ ++A A + T+ L +T G+ F I++ E+ Sbjct: 126 AFEVPLLNTAVLLASGVTVTWAHHALMEGK-RTDTIQALSLTILLGIYFTILQASEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 S + ++FF G HGLHV G +L + +I+ + + + + Sbjct: 183 -ETSFTISDSVYGATFFVATGFHGLHVIIGSTFLMICLIRQSLFHFTTNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|5835869|ref|NP_008640.1|COX3_15069 cytochrome c oxidase subunit III [Sus scrofa] gi|223976085|ref|YP_002600783.1| cytochrome c oxidase subunit III [Sus scrofa domesticus] gi|6166025|sp|Q35916|COX3_PIG RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|4958958|gb|AAD34191.1|AF034253_7 cytochrome c oxidase subunit III [Sus scrofa] gi|37962875|gb|AAR05788.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|223972366|dbj|BAH23399.1| cytochrome oxidase subunit III [Sus scrofa domestica] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|283099324|ref|YP_003359491.1| cytochrome c oxidase subunit III [Acheilognathus macropterus] gi|146142421|gb|ABQ01679.1| cytochrome c oxidase subunit III [Acheilognathus macropterus] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ L F FF + P I D Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGCWPPTGIITLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLALTILLGLYFTALQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V +++ ++ S + + +WHF Sbjct: 185 PFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|33320886|gb|AAQ06168.1| cytochrome oxidase subunit III [Sus scrofa] Length = 278 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEALFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|207559805|gb|ACI24412.1| cytochrome c oxidase subunit 3 [Hemitragus jayakari] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|62184361|ref|YP_220712.1| cytochrome c oxidase subunit III [Balaenoptera bonaerensis] gi|62086573|dbj|BAD91674.1| cytochrome c oxidase subunit III [Balaenoptera bonaerensis] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|62184319|ref|YP_220751.1| cytochrome c oxidase subunit III [Balaenoptera borealis] gi|62086629|dbj|BAD91726.1| cytochrome c oxidase subunit III [Balaenoptera borealis] gi|289474201|gb|ADC97750.1| cytochrome c oxidase subunit III [Megaptera novaeangliae] gi|289474203|gb|ADC97751.1| cytochrome c oxidase subunit III [Megaptera novaeangliae] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|38707499|ref|NP_944652.1| cytochrome c oxidase subunit III [Balaenoptera acutorostrata] gi|38602466|emb|CAD87929.1| cytochrome c oxidase polypeptide III [Balaenoptera acutorostrata] gi|62086601|dbj|BAD91700.1| cytochrome c oxidase subunit III [Balaenoptera acutorostrata] gi|90265655|dbj|BAE91872.1| cytochrome c oxidase subunit III [Balaenoptera brydei] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|326536083|ref|YP_004300514.1| cytochrome c oxidase subunit III [Odocoileus virginianus] gi|309399259|gb|ADO78894.1| cytochrome c oxidase subunit III [Odocoileus virginianus] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|116733702|gb|ABK19908.1| cytochrome oxidase subunit 3 [Ichthyomyzon castaneus] Length = 261 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 9/195 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYA----AGPAPIDVFDISG 73 + G G ++++S+ FA FF + A L + P I+ + Sbjct: 69 GHHTSPVQQGLRYGMILFIISEVCFFAGFFWAFYHASLAPTHELGLTWPPTGINPLNPFE 128 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + + +LL+S S T++ +T L +T G+ F ++I E+ Sbjct: 129 VPLLNTAVLLASGVSVTWAHHSITEKNRMETTQALTMTILLGLYFTALQIMEYH---ETP 185 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 S + S+FF G HGLHV G ++L +++ + S + + +WHF+ Sbjct: 186 FTMADSVYGSTFFVATGFHGLHVIIGSMFLLTCLMRHTQYHFTSKHHFGFEAAAWYWHFV 245 Query: 194 DLIWICVFSFVYLMG 208 D++W+ ++ +Y G Sbjct: 246 DVVWLFLYISIYWWG 260 >gi|315500562|ref|YP_004089364.1| cytochrome o ubiquinol oxidase, subunit III [Asticcacaulis excentricus CB 48] gi|315418574|gb|ADU15213.1| cytochrome o ubiquinol oxidase, subunit III [Asticcacaulis excentricus CB 48] Length = 225 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 93/178 (52%), Positives = 122/178 (68%), Gaps = 1/178 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWIYLMSDCL+FA F TYAVL A GP ++FD+ + + T +LLLSSL+ + Sbjct: 48 LGFWIYLMSDCLIFATLFATYAVLKDATAGGPNGRELFDLGFVAIETSLLLLSSLTFGLS 107 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M++ ++ + WL VT G+ F+ ME+YEF HLI A P RSAFLS+FF LVG Sbjct: 108 MISMQ-NNKLNGVLGWLAVTGLLGLGFMGMELYEFNHLIHEGAGPDRSAFLSAFFTLVGT 166 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 HGLHV GLIW+ V+ + + ++GL N+ R++ LS+FWHFLD+IWI VFS VYLMG Sbjct: 167 HGLHVTSGLIWMGVMFVHLFRRGLTPANRIRMMELSLFWHFLDIIWIGVFSIVYLMGA 224 >gi|295096782|emb|CBK85872.1| cytochrome bo3 quinol oxidase subunit 3 [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 204 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 99/179 (55%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A Sbjct: 27 FGFWIYLMSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMA 86 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG Sbjct: 87 AIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGT 145 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GLIW+ VL+ QI ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG + Sbjct: 146 HGLHVTSGLIWMAVLMFQISRRGLTSTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204 >gi|283850556|ref|ZP_06367844.1| cytochrome o ubiquinol oxidase, subunit III [Desulfovibrio sp. FW1012B] gi|283574127|gb|EFC22099.1| cytochrome o ubiquinol oxidase, subunit III [Desulfovibrio sp. FW1012B] Length = 205 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 86/179 (48%), Positives = 113/179 (63%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++F+ F TY VL NYA GP ++F + G + TI+LL SS + A Sbjct: 27 FGFWLYLMSDLILFSGLFATYVVLSHNYAGGPTGKELFHLPGALLETILLLCSSAAYGLA 86 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A R ++ L T G+ F+ ME EF +I A PQRS FLS+FF LVG Sbjct: 87 TVAMHKGR-KDLLLAGLGATFLLGLGFLAMEAAEFRQMILDGAGPQRSGFLSAFFTLVGT 145 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV GL+WL V++ Q+ KGL + Q RL+ L MFWHFLD++WI +FS VYLMGV+ Sbjct: 146 HGAHVACGLVWLVVMMGQVAAKGLTTPVQGRLMRLGMFWHFLDIVWIGLFSVVYLMGVM 204 >gi|37719399|gb|AAR01786.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EAPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVTIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|71009449|dbj|BAE11843.1| cytochrome oxydase subunit III [Homo sapiens] gi|298367942|gb|ADI80101.1| cytochrome c oxidase subunit III [Homo sapiens] gi|302377328|gb|ADL31577.1| cytochrome c oxidase subunit III [Homo sapiens] Length = 261 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPID 67 + G G +++ S+ FA F + G P++ Sbjct: 66 TYQGHHTPPVQKGLRYGMILFITSEVFFFAGFLWAFYHSSLAPTPQLGGHWPPTGITPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + ++ + LL+T G+ F +++ E+ Sbjct: 126 PLEVP--LLNTSVLLASGVSITWAHHSLMENN-RNQMIQALLITILLGLYFTLLQASEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L + I+ L S + + Sbjct: 182 --FESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|9653266|ref|NP_062473.1| cytochrome c oxidase subunit III [Physeter catodon] gi|9368969|emb|CAB98276.1| cytochrome oxidase subunit III [Physeter catodon] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I D Sbjct: 68 QGHHTPTVQKGLRYGMVLFILSEILFFTGFFWAFYHSSLAPTPELGGCWPPTGICPLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 KVPLLNTSVLLASGVSITWAHHSLMQGDRKQMLQALFITIALGLYFTLLQASEY---YET 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ +K + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQMKFHFTPNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|299825754|ref|YP_003734683.1| cytochrome c oxidase subunit III [Lethenteron reissneri] gi|298103879|dbj|BAJ09376.1| cytochrome oxidase subunit III [Lethenteron reissneri] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 15/198 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVFD 70 + G G ++++S+ FA FF + G P++ F+ Sbjct: 69 GHHTSPVQQGLRYGMILFIISEVCFFAGFFWAFYHASLAPTLELGLTWPPTGITPLNPFE 128 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + ++T VLL S +S ++A + K T L +T G+ F ++ E+ Sbjct: 129 VP--LLNTAVLLASGVSVTWAHHSITEKNRTEAT-QALALTVLLGLYFTALQAMEY---Y 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S+FF G HGLHV G ++L +++ ++ S + + +W Sbjct: 183 ETPFTMADSVYGSTFFVATGFHGLHVIIGSLFLLTCLMRHMQYHFTSKHHFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ +Y G Sbjct: 243 HFVDVVWLFLYISIYWWG 260 >gi|62184487|ref|YP_220738.1| cytochrome c oxidase subunit III [Balaenoptera brydei] gi|62086615|dbj|BAD91713.1| cytochrome c oxidase subunit III [Balaenoptera brydei] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|145315603|gb|ABP63151.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|239826488|ref|YP_002949112.1| cytochrome C oxidase subunit III [Geobacillus sp. WCH70] gi|239806781|gb|ACS23846.1| cytochrome c oxidase subunit III [Geobacillus sp. WCH70] Length = 206 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 1/187 (0%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LG W++L + ++FA F T+ L A GP ++F + +FV+T++LL Sbjct: 20 TIEGKNKFLGLWVFLGGETVLFASLFGTFIALRDKTAGGPTSQELFHLPLVFVATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +A+ K + W +T G+ F+ +EIYEF + SAF S Sbjct: 80 SSLTSVYAIYHMKNFDFK-KMMLWFGITVLLGLCFLGLEIYEFYEYVHKGLKFSTSAFSS 138 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 +F+ LVGLHG HV FGL W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 139 AFYTLVGLHGSHVAFGLSWILTLMIRNAKRGLNLYNAPKFYVASLYWHFIDVVWVFIFTV 198 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 199 VYLMGMV 205 >gi|251829656|gb|ACT21209.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|312233370|ref|YP_004021581.1| cytochrome c oxidase subunit III [Sus scrofa taiwanensis] gi|45826218|gb|AAS77736.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|76262528|gb|ABA41416.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|76262556|gb|ABA41442.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|78499541|gb|ABB45794.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|95116711|gb|ABF56566.1| cytochrome c oxidase subunit III [Sus scrofa] gi|118135680|gb|ABK62691.1| cytochrome oxidase subunit III [Sus scrofa] gi|125213069|dbj|BAF46409.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315435|gb|ABP62995.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315449|gb|ABP63008.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315477|gb|ABP63034.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315491|gb|ABP63047.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315519|gb|ABP63073.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315533|gb|ABP63086.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315547|gb|ABP63099.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315561|gb|ABP63112.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315575|gb|ABP63125.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315589|gb|ABP63138.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315631|gb|ABP63177.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315645|gb|ABP63190.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315659|gb|ABP63203.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315673|gb|ABP63216.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315687|gb|ABP63229.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315701|gb|ABP63242.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315715|gb|ABP63255.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315729|gb|ABP63268.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315743|gb|ABP63281.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315757|gb|ABP63294.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315771|gb|ABP63307.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315783|gb|ABP63318.1| cytochrome c oxidase subunit III [Sus scrofa] gi|145315797|gb|ABP63331.1| cytochrome c oxidase subunit III [Sus scrofa] gi|157056542|gb|ABV02173.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|159162013|gb|ABM92887.2| cytochrome c oxidase subunit III [Sus scrofa] gi|225580660|gb|ABE02595.2| cytochrome c oxidase subunit III [Sus scrofa] gi|238625889|gb|ACR48215.1| cytochrome c oxidase subunit III [Sus scrofa] gi|269812091|gb|ACZ44403.1| cytochrome c oxidase subunit III [Sus scrofa taiwanensis] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|207559861|gb|ACI24464.1| cytochrome c oxidase subunit 3 [Capra nubiana] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGXYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|12667712|ref|NP_075401.1| cytochrome c oxidase subunit III [Thryonomys swinderianus] gi|12657503|emb|CAC27805.1| cytochrome oxidase subunit III [Thryonomys swinderianus] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + + G G ++++S+ L F+ FF + + L G Sbjct: 68 QGHHTSIVQKGLRYGMILFIISEVLFFSGFFWAFYHSSLAPTPELGGHWPPTGINPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F I+++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MIQALLITIILGIYFTILQMSEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ L S + + +WH Sbjct: 184 SSFTISDGIYGSTFFVATGFHGLHVIIGTTFLTVCLLRQLYYHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|319784696|ref|YP_004144172.1| cytochrome C oxidase subunit III [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170584|gb|ADV14122.1| cytochrome c oxidase subunit III [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 293 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 17/208 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA-----------VLGKNY---AAG 62 + + V G +++ S+ + F +F Y + Sbjct: 82 AHEGHHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFAGEAQNYARATFTGGVWP 141 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P ++V D + + V+LL S + S ++ L++T GM+F +++ Sbjct: 142 PKGMEVLDPFHLPLYNTVILLLSGTTVTWAHHSLLHGDRKGLINGLVLTVGLGMLFTMVQ 201 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+ H + S + ++FF G HG HV G I+L V +I+ +K Sbjct: 202 AYEYMH---APFAFKDSIYGATFFMATGFHGFHVIIGTIFLLVCLIRAMKGDFTPKQHFG 258 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210 + +WHF+D++W+ +F+ +Y+ G V Sbjct: 259 FEAAAWYWHFVDVVWLFLFASIYVWGSV 286 >gi|76262542|gb|ABA41429.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|80972999|gb|ABB53230.1| cytochrome c oxidase subunit 3 [Sus scrofa] gi|83779152|gb|ABC47395.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVTIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5921881|sp|O47697|COX3_RAPME RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731902|gb|AAB93601.1| cytochrome oxidase subunit III [Raphicerus melanotis] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYPMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|215399174|ref|YP_002332302.1| cytochrome c oxidase subunit III [Podarcis siculus] gi|62900874|gb|AAY18762.1| cytochrome c oxidase subunit III [Podarcis siculus] gi|213983309|gb|ACJ54991.1| cytochrome c oxidase subunit III [Podarcis siculus] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG- 73 + G G +++ S+ L FA FF + + L G Sbjct: 66 TYQGHHTMPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPELGGQWPPTGIFPLN 125 Query: 74 ----IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++T VLL S ++ ++A A + T+ L +T G+ F ++ E+ Sbjct: 126 AFEVPLLNTAVLLASGVTVTWAHHALMEGK-RTDTIQALSLTILLGLYFTFLQATEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 S + ++FF G HGLHV G +L + +I+ + + + + Sbjct: 183 -ETSFTISDSVYGATFFVATGFHGLHVIIGSTFLAICLIRQSLFHFTTNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|5921869|sp|O47705|COX3_GAZRU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731922|gb|AAB93611.1| cytochrome oxidase subunit III [Eudorcas rufifrons] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|158423724|ref|YP_001525016.1| cytochrome o ubiquinol oxidase subunit III [Azorhizobium caulinodans ORS 571] gi|158330613|dbj|BAF88098.1| cytochrome o ubiquinol oxidase subunit III [Azorhizobium caulinodans ORS 571] Length = 208 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 108/191 (56%), Positives = 142/191 (74%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + + + T LGFWIYLMSDCL+FA+ F T+ VLG NYAAGP P D+FD+ + V+T Sbjct: 18 DEHAHPEGHSTALGFWIYLMSDCLIFAMLFATFGVLGGNYAAGPGPKDLFDLKLVAVNTA 77 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FAMLA R + WL +TA FG+ F+ +E+YEF H+I A PQRS Sbjct: 78 MLLFSSITYGFAMLAMEKGRQS-QVQLWLAITALFGLAFLSIELYEFHHMIHEGAGPQRS 136 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AFLS+FF LVG HG+HV FGLIWL +++Q+ + GLI+ N+RRL+CLSMFWHFLD+IWI Sbjct: 137 AFLSAFFTLVGTHGVHVTFGLIWLVTMMVQVGRFGLITANRRRLMCLSMFWHFLDVIWIG 196 Query: 200 VFSFVYLMGVV 210 VF+FVYLMG++ Sbjct: 197 VFTFVYLMGML 207 >gi|84488601|ref|YP_448939.1| cytochrome c oxidase subunit III [Rangifer tarandus] gi|84095024|dbj|BAE66693.1| cytochrome c oxidase subunit 3 [Rangifer tarandus] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKYHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|38707513|ref|NP_944613.1| cytochrome c oxidase subunit III [Balaena mysticetus] gi|38602424|emb|CAD87890.1| cytochrome c oxidase polypeptide III [Balaena mysticetus] gi|62086657|dbj|BAD91752.1| cytochrome c oxidase subunit III [Balaena mysticetus] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5921880|sp|O47696|COX3_RAPCA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731900|gb|AAB93600.1| cytochrome oxidase subunit III [Raphicerus campestris] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYPMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|121582442|ref|YP_980171.1| cytochrome c oxidase subunit III [Takydromus tachydromoides] gi|121309340|dbj|BAF43959.1| cytochrome oxidase subunit 3 [Takydromus tachydromoides] Length = 261 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG- 73 + G LG +++ S+ L F FF + + L G + Sbjct: 66 TYQGHHTLSVQKGLRLGMILFITSEILFFMGFFWAFYHSSLAPTPELGSQWPPMGIQPLN 125 Query: 74 ----IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++T VLL S ++ ++A A + T+ L +T F G+ F ++ E+ Sbjct: 126 AFEVPLLNTAVLLASGVTVTWAHHALMEGQ-RKATIQALTLTIFLGLYFTALQATEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 S + ++FF G HGLHV G +L + +I+ + + + + Sbjct: 182 YETSFSISDSVYGATFFVATGFHGLHVIIGSTFLLICLIRQALYHFTTNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|294012086|ref|YP_003545546.1| cytochrome o ubiquinol oxidase subunit III [Sphingobium japonicum UT26S] gi|292675416|dbj|BAI96934.1| cytochrome o ubiquinol oxidase subunit III [Sphingobium japonicum UT26S] Length = 200 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 114/195 (58%), Positives = 140/195 (71%), Gaps = 1/195 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 Y ++ + T LGFW+YLMSDCL+FA+ F TYAVLG +YA GP P D+FD+ I Sbjct: 6 YHLAEEPHLHEGHSTMLGFWMYLMSDCLIFAILFATYAVLGGSYAGGPGPKDLFDLPLIA 65 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 ++T +LL SS++ FAMLA R + T WL VT FG F+ +E+YEF+HLI A Sbjct: 66 LNTAMLLFSSITYGFAMLAMEKNR-VSATQGWLFVTLLFGGAFLFIELYEFSHLIHEGAG 124 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RSAFLSSFF LVG HGLHV FG IWL L+ Q+ KKGLI N+RRL+CLSMFWHFLD+ Sbjct: 125 PWRSAFLSSFFTLVGTHGLHVTFGSIWLVTLMAQVAKKGLIPANKRRLLCLSMFWHFLDV 184 Query: 196 IWICVFSFVYLMGVV 210 IWI VF+FVYLMGV+ Sbjct: 185 IWIGVFTFVYLMGVL 199 >gi|219524208|ref|YP_002456352.1| cytochrome coxidase subunit III [Hydropotes inermis] gi|161824385|gb|ABX79760.1| cytochrome coxidase subunit III [Hydropotes inermis] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSKHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|11055650|gb|AAG28196.1|AF304201_7 COIII [Sus scrofa] Length = 267 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTLVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|164421063|ref|YP_001648429.1| cytochrome c oxidase subunit III [Odontobutis platycephala] gi|62902038|gb|AAY18977.1| cytochrome c oxidase subunit III [Odontobutis platycephala] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ +F FF + PA I D Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVFLFVGFFWAFYHSSLAPSPELGGCWPPAGILALDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 G+ + +LL+S S + + + L +T G F +++ E+ Sbjct: 128 GVPLLNTAVLLASGVTVTWAHHSIMENERKQAIHSLTLTILLGFYFTLLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V +++ ++ S + + +WHF Sbjct: 185 PFTIADGVYGSTFFVATGFHGLHVIIGSTFLSVCLLRQIRYHFTSEHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|62184417|ref|YP_220764.1| cytochrome c oxidase subunit III [Eubalaena australis] gi|62184543|ref|YP_220777.1| cytochrome c oxidase subunit III [Eubalaena japonica] gi|62086671|dbj|BAD91765.1| cytochrome c oxidase subunit III [Eubalaena australis] gi|62086685|dbj|BAD91778.1| cytochrome c oxidase subunit III [Eubalaena japonica] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|45826176|gb|AAS77697.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|94309895|ref|YP_583105.1| cytochrome c oxidase subunit III [Cupriavidus metallidurans CH34] gi|93353747|gb|ABF07836.1| cytochrome o ubiquinol oxidase subunit III [Cupriavidus metallidurans CH34] Length = 214 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 92/183 (50%), Positives = 122/183 (66%), Gaps = 1/183 (0%) Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87 + T GFW+YLMSDC++FA F +AVL A GP+ ++F+++ + V T +LL SS++ Sbjct: 33 ENTVFGFWLYLMSDCILFACLFAAFAVLRGEVAGGPSGKEIFELNYVLVETAILLFSSIT 92 Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147 FA + S + + WL VT G F+ MEI EFAHLI A P RSAFLSSFF Sbjct: 93 YGFA-MVSMQNHQKGRVMFWLGVTFLLGAAFMGMEINEFAHLIHEGAGPSRSAFLSSFFT 151 Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207 LVG HGLHV G++W+ VL+ Q+ KKGL +RL CLS+FWHFLD++WI VF+ VYLM Sbjct: 152 LVGTHGLHVASGMLWMLVLMWQLSKKGLTPVVAKRLNCLSLFWHFLDVVWIGVFTVVYLM 211 Query: 208 GVV 210 G + Sbjct: 212 GAM 214 >gi|5921884|sp|O47690|COX3_SYNCA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2707253|gb|AAB92241.1| cytochrome oxidase subunit III [Syncerus caffer] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRSHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|294143096|ref|YP_003559074.1| cytochrome o ubiquinol oxidase subunit III [Shewanella violacea DSS12] gi|7657997|dbj|BAA94866.1| quinol oxidase sybunit IV [Shewanella violacea] gi|293329565|dbj|BAJ04296.1| cytochrome o ubiquinol oxidase, subunit III [Shewanella violacea DSS12] Length = 207 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 92/207 (44%), Positives = 136/207 (65%), Gaps = 2/207 (0%) Query: 5 KIGKSPNFSLFYVKDKKESCVDHDG-TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGP 63 I + + + + D G T GFW+YLM+DC++FA F TYAVL N G Sbjct: 2 SIAIRADLEVVQADEHHDEHHDTSGNTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGV 61 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 + D+F+++ + + T VLL+SS++ FA++ + + T+ WLL+T G FI ME+ Sbjct: 62 SGKDIFELNFVAIETAVLLISSITFGFALICAK-HQKRTATLIWLLITFALGCGFISMEV 120 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YEF HLI PQRSAFL++FF LVG+HGLHV GLIW+ ++++++ K GL + + RL Sbjct: 121 YEFYHLIEQGNGPQRSAFLTAFFTLVGMHGLHVTAGLIWMAIMMLEVTKSGLNNRSITRL 180 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGVV 210 CLS+FWHFLD++WICVF+ VYL+G++ Sbjct: 181 GCLSLFWHFLDVVWICVFTLVYLLGML 207 >gi|5921871|sp|O48316|COX3_GAZSU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731932|gb|AAB93616.1| cytochrome oxidase subunit III [Gazella subgutturosa] gi|2731934|gb|AAB93617.1| cytochrome oxidase subunit III [Gazella subgutturosa] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|5921868|sp|O47709|COX3_GAZLE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731930|gb|AAB93615.1| cytochrome oxidase subunit III [Gazella leptoceros] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|260460300|ref|ZP_05808552.1| Cytochrome-c oxidase [Mesorhizobium opportunistum WSM2075] gi|259033945|gb|EEW35204.1| Cytochrome-c oxidase [Mesorhizobium opportunistum WSM2075] Length = 292 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 17/208 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--------------KNYAAG 62 + + V G +++ S+ + F +F Y Sbjct: 81 AHEGHHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFAGEAQNYARHAFTGGVWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P ++V D + + V+LL S + S ++ L++T GM+F +++ Sbjct: 141 PKGMEVLDPFHLPLYNTVILLLSGTTVTWAHHSLIHGDRKGLINGLVLTVGLGMLFTMVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+ H + S + ++FF G HG HV G I+L V +I+ +K Sbjct: 201 AYEYMH---APFGFKDSIYGATFFMATGFHGFHVIIGTIFLLVCLIRAMKGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMGVV 210 + +WHF+D++W+ +F+ +Y+ G V Sbjct: 258 FEAAAWYWHFVDVVWLFLFASIYVWGSV 285 >gi|33334126|gb|AAQ12184.1| cytochrome c oxidase subunit III [Bubalus bubalis] gi|44894102|gb|AAS48604.1| cytochrome c oxidase subunit III [Bubalus bubalis] Length = 260 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|9801577|ref|NP_063907.1| cytochrome c oxidase subunit III [Lama pacos] gi|9558350|emb|CAC00508.1| COIII [Lama pacos] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F+ FF + P I + Sbjct: 68 QGHHTPSVQKGLRYGMVLFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRTHMLQALFITIALGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTIPDSVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|2707237|gb|AAB92233.1| cytochrome oxidase subunit III [Tragelaphus angasii] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|213023463|ref|ZP_03337910.1| cytochrome o ubiquinol oxidase subunit III [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 186 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 95/186 (51%), Positives = 125/186 (67%), Gaps = 1/186 (0%) Query: 25 VDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84 GFW+YLMSDC++F++ F TYAVL A GP D+F++ + V T +LL S Sbjct: 2 TQARNKIFGFWVYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFS 61 Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144 S++ A +A + +SWL +T FG FI MEIYEF HLI P RS FLS+ Sbjct: 62 SITYGMAAIAMHKNN-KSQVISWLALTFLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSA 120 Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204 FFALVG HGLHV GLIW+ VL++Q+ ++GL S N+ R++CLS+FWHFLD+IWICVF+ V Sbjct: 121 FFALVGTHGLHVTSGLIWMAVLMVQVARRGLTSTNRTRIMCLSLFWHFLDVIWICVFTVV 180 Query: 205 YLMGVV 210 YLMG + Sbjct: 181 YLMGAM 186 >gi|90265627|dbj|BAE91846.1| cytochrome c oxidase subunit III [Balaenoptera omurai] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|6691429|ref|NP_033644.1|COX3_15157 cytochrome c oxidase subunit III [Lampetra fluviatilis] gi|6523336|emb|CAB62220.1| cytochrome oxidase subunit III [Lampetra fluviatilis] Length = 261 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 15/198 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVFD 70 + G G ++++S+ FA FF + G P++ F+ Sbjct: 69 GHHTSPVQQGLRYGMILFIISEVCFFAGFFWAFYHASLAPTLELGLMWPPTGITPLNPFE 128 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + ++T VLL S +S ++A + K T L +T G+ F ++ E+ Sbjct: 129 VP--LLNTAVLLASGVSVTWAHHSITEKNRTEAT-QALALTVLLGLYFTALQAMEY---Y 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S+FF G HGLHV G ++L +++ ++ S + + +W Sbjct: 183 ETPFTMADSVYGSTFFVATGFHGLHVIIGSLFLLTCLVRHMQYHFTSKHHFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ +Y G Sbjct: 243 HFVDVVWLFLYISIYWWG 260 >gi|326386654|ref|ZP_08208276.1| cytochrome c oxidase, subunit III [Novosphingobium nitrogenifigens DSM 19370] gi|326208969|gb|EGD59764.1| cytochrome c oxidase, subunit III [Novosphingobium nitrogenifigens DSM 19370] Length = 274 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 16/204 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA------------VLGKNYAAGPA 64 + + V G +++ S+ + F +F + V+G + Sbjct: 68 AHEGHHTPVVQLHQRYGMILFIASEVMFFVGWFWAFFDFSLFPSKIATDVIGGQWPPKAI 127 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 + ++T++LL S + ++A A L T GM+F ++ Y Sbjct: 128 EAVMNTFDLPLLNTLILLCSGTTLTWAHHALI-HDNRKDLKRGLWATILLGMMFSSIQAY 186 Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184 E+ + ++ + S F+ G HG HV G I+L V +++ + Sbjct: 187 EY---VHAPFAFGQNTYGSVFYMATGFHGFHVIVGTIFLIVCLVRAYRNDFTPRQHFGFE 243 Query: 185 CLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 244 AAAWYWHFVDVVWLFLFVSIYVWG 267 >gi|254524322|ref|ZP_05136377.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp. SKA14] gi|219721913|gb|EED40438.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp. SKA14] Length = 211 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 90/185 (48%), Positives = 118/185 (63%), Gaps = 2/185 (1%) Query: 26 DHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLS 84 + G G W+YLMSD ++F F +YAVL YA GP D+F + + T +LL+S Sbjct: 27 EQGGMKVFGMWVYLMSDLVLFGSLFASYAVLSTAYAGGPTGKDLFSLPFVMAETFLLLVS 86 Query: 85 SLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSS 144 S++ A+LA + WL VT G FI MEIYEF+HLI A P SA+LS+ Sbjct: 87 SITYGQAVLAMHRHDAS-AVLRWLGVTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSA 145 Query: 145 FFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFV 204 FFALV HGLHV GLIW+ V++ Q+ ++GL N R+ CLS+FWHFLDL+WICVF+FV Sbjct: 146 FFALVATHGLHVASGLIWMAVVMHQVYRRGLTPTNITRVSCLSLFWHFLDLVWICVFTFV 205 Query: 205 YLMGV 209 YL+G Sbjct: 206 YLIGA 210 >gi|51339437|gb|AAU00479.1| cytochrome c oxidase subunit III [Mephitis mephitis] Length = 261 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V G G ++++S+ L FA FF + + L G + Sbjct: 68 QGHHTPVVQKGLRYGMILFILSEVLFFAGFFWAFYHSSLAPTPELGGCWPPTGIMPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F ++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITISLGLYFTALQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + ++ L S + + +WH Sbjct: 184 TSFTISDGIYGSTFFMATGFHGLHVIIGSTFLIICFLRQLNFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5921885|sp|O47685|COX3_TRAIM RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2707243|gb|AAB92236.1| cytochrome oxidase subunit III [Tragelaphus imberbis] Length = 261 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGIYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|91176195|ref|YP_537151.1| cytochrome c oxidase subunit III [Balaenoptera edeni] gi|90265641|dbj|BAE91859.1| cytochrome c oxidase subunit III [Balaenoptera edeni] Length = 261 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLVPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|38707527|ref|NP_944626.1| cytochrome c oxidase subunit III [Caperea marginata] gi|38602438|emb|CAD87903.1| cytochrome c oxidase polypeptide III [Caperea marginata] gi|62086699|dbj|BAD91791.1| cytochrome c oxidase subunit III [Caperea marginata] Length = 261 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5921864|sp|O47693|COX3_CEPNA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731894|gb|AAB93597.1| cytochrome oxidase subunit III [Cephalophus natalensis] Length = 261 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|260426790|ref|ZP_05780769.1| cytOchrome o ubiquinol oxidase, subunit III [Citreicella sp. SE45] gi|260421282|gb|EEX14533.1| cytOchrome o ubiquinol oxidase, subunit III [Citreicella sp. SE45] Length = 219 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 110/202 (54%), Positives = 130/202 (64%), Gaps = 1/202 (0%) Query: 6 IGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP 65 + P ++ T +GFWIYLMSDC++F F TYAVLG NYA GPAP Sbjct: 16 LADEPMHHARNNDAHHDAHAHSSPTPIGFWIYLMSDCIIFGALFATYAVLGGNYAGGPAP 75 Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125 D+F+ + + T +LL SS++ AML + K + WL VTA FG FI MEIYE Sbjct: 76 KDLFEPGFVAIETALLLFSSITFGLAMLRA-DKDDRDGVLKWLAVTAVFGAGFIAMEIYE 134 Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185 F HLI + A P RSAFLSSFFALVG HGLHV GLIWL L++QI GLI N RRL Sbjct: 135 FNHLIHIGAGPDRSAFLSSFFALVGTHGLHVTGGLIWLVTLMVQIRMHGLIGENMRRLGT 194 Query: 186 LSMFWHFLDLIWICVFSFVYLM 207 LSMFWHFLDL+WI VFSFVYL+ Sbjct: 195 LSMFWHFLDLVWIGVFSFVYLV 216 >gi|146310558|ref|YP_001175632.1| cytochrome o ubiquinol oxidase subunit III [Enterobacter sp. 638] gi|145317434|gb|ABP59581.1| cytochrome bo3 quinol oxidase subunit 3 [Enterobacter sp. 638] Length = 204 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A Sbjct: 27 FGFWIYLMSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETGLLLFSSITYGMA 86 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A K + +SWL +T FG FI MEIYEF HLI+ P RS FLS+FFALVG Sbjct: 87 AIA-MYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIAEGFGPDRSGFLSAFFALVGT 145 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GLIW+ VL+ Q+ ++GL + N+ R++CLS+FWHFLD++WICVFS VYLMG + Sbjct: 146 HGLHVTSGLIWMAVLMFQVYRRGLTNTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204 >gi|5835002|ref|NP_007062.1|COX3_10457 cytochrome c oxidase subunit III [Balaenoptera musculus] gi|729192|sp|P41295|COX3_BALMU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|414133|emb|CAA51001.1| cytochrome oxidase subunit III [Balaenoptera musculus] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFERAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5819108|ref|NP_006895.1|COX3_10014 cytochrome c oxidase subunit III [Balaenoptera physalus] gi|117054|sp|P24989|COX3_BALPH RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|12785|emb|CAA43453.1| cytochrome c oxidase subunit III [Balaenoptera physalus] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIRPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFERAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|49616781|ref|YP_044758.1| cytochrome c oxidase subunit III [Rena humilis] gi|49256937|dbj|BAD24743.1| cytochrome oxidase subunit 3 [Rena humilis] Length = 259 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 9/193 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDIS 72 + G ++++S+ + F FF + A P I + + Sbjct: 68 QGHHTPPVQKNLRYGMALFIISEVMFFTGFFWALFYVSVLPAPEIGGHWPPTGITPINPT 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 G+ + +LLSS + + +T LL+T G+ F +++ E+ Sbjct: 128 GVPLLNTAILLSSGATITWAHHAMKLGQKKETQMALLLTITLGLYFSFIQLSEYK---EA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S FF G HGLHV G +L +++I K L + + + +WHF Sbjct: 185 PFTISDCIYGSVFFVATGFHGLHVIIGTTFLITCLLRIYKNHLTTKHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVY 205 +D++W+ +F VY Sbjct: 245 VDVVWLFLFISVY 257 >gi|212709188|ref|ZP_03317316.1| hypothetical protein PROVALCAL_00221 [Providencia alcalifaciens DSM 30120] gi|212688100|gb|EEB47628.1| hypothetical protein PROVALCAL_00221 [Providencia alcalifaciens DSM 30120] Length = 204 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 87/195 (44%), Positives = 123/195 (63%), Gaps = 1/195 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + GFWIYLMSD ++FA F TY VL A GPA D+F + + Sbjct: 11 VAHAEHGHHDAGATKVFGFWIYLMSDLILFASLFATYVVLSDGTAGGPAGRDIFSLQFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 T +LL SS++ FAM+A ++ + WL +T FG+ F++ME+YEF LI+ Sbjct: 71 GETFLLLFSSITYGFAMIAMHKEK-VAAVNLWLFITFLFGLGFVVMEVYEFHELIAEGYG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RS FLS+FFALV HG+HV GL+W+ +++IQ ++GL + N+ RL CLS+FWHFLD+ Sbjct: 130 PDRSGFLSAFFALVATHGIHVTCGLVWIILMIIQNCRRGLTAVNKTRLNCLSLFWHFLDV 189 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYL+G + Sbjct: 190 VWICVFTVVYLLGAI 204 >gi|28867224|ref|NP_789854.1| cytochrome c oxidase subunit III [Muntiacus crinifrons] gi|28569624|gb|AAO43644.1| cytochrome c oxidase subunit III [Muntiacus crinifrons] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSDLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|62184333|ref|YP_220725.1| cytochrome c oxidase subunit III [Megaptera novaeangliae] gi|62086587|dbj|BAD91687.1| cytochrome c oxidase subunit III [Megaptera novaeangliae] gi|219560180|gb|ACL27307.1| cytochrome c oxidase subunit III [Megaptera novaeangliae] gi|289474199|gb|ADC97749.1| cytochrome c oxidase subunit III [Megaptera novaeangliae] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMVLFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|261341031|ref|ZP_05968889.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter cancerogenus ATCC 35316] gi|288316896|gb|EFC55834.1| cytochrome o ubiquinol oxidase, subunit III [Enterobacter cancerogenus ATCC 35316] Length = 204 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++F F TYAVL A GP D+F++ + V T +LL SS++ A Sbjct: 27 FGFWIYLMSDCILFCCLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMA 86 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG Sbjct: 87 AIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGT 145 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG + Sbjct: 146 HGLHVTSGLIWMAVLMFQVSRRGLTSTNRTRIMCLSLFWHFLDVVWICVFSVVYLMGAM 204 >gi|200004010|ref|YP_002221519.1| cytochrome c oxidase subunit III [Rachycentron canadum] gi|197941139|gb|ACH78274.1| cytochrome c oxidase subunit III [Rachycentron canadum] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +D F Sbjct: 68 QGHHTFPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T +LL S ++ ++A + ++ + + L +T G+ F ++ E+ Sbjct: 128 EVP--LLNTAILLASGVTVTWAHHSIMEEK-RKQAIQALTLTIILGVYFTALQAMEYN-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L + +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVIIGTTFLAICLLRQVQYHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|37496440|emb|CAD21979.1| cytochrome oxidase subunit III [Procavia capensis] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD-I 71 + G G ++++S+ L F FF + P ++ D + Sbjct: 68 QGHHTPNVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGVNPLDPM 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKH-MIQALSMTIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 TPFSISDGVYGSTFFVATGFHGLHVIIGSTFLMVCLLRQLKFHFTSDHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|330813657|ref|YP_004357896.1| cytochrome c oxidase polypeptide III [Candidatus Pelagibacter sp. IMCC9063] gi|327486752|gb|AEA81157.1| cytochrome c oxidase polypeptide III [Candidatus Pelagibacter sp. IMCC9063] Length = 263 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 9/197 (4%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDI 71 + V G +++ S+ + F +F Y P I D Sbjct: 69 HKGDHTPVVQISHRYGMVLFIASEVMFFVAWFWAYFDASLFPDQAIGGVWPPKDIQTLDP 128 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 I + ++LL S + + + V L++T G IF + + YE+ Sbjct: 129 WHIPLINTLILLLSGTTVTWAHHAMLENDRKSLVQGLVLTVILGAIFTMFQAYEYM---V 185 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+F+ G HG HV G I+L V + + + + + +WH Sbjct: 186 ASFTMSSGIYGSTFYMATGFHGFHVLIGTIFLAVCLFRAKRGHYTPDHHFGFEAAAWYWH 245 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ +F+ +Y+ G Sbjct: 246 FVDVVWLFLFASIYIWG 262 >gi|32402532|ref|NP_861482.1| cytochrome c oxidase subunit III [Procavia capensis] gi|32187987|dbj|BAC78405.1| cytochrome oxidase subunit 3 [Procavia capensis] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD-I 71 + G G ++++S+ L F FF + P ++ D + Sbjct: 68 QGHHTPNVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGVNPLDPM 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKH-MIQALSMTIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 TPFSISDGVYGSTFFMATGFHGLHVIIGSTFLMVCLLRQLKFHFTSDHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|295065502|ref|YP_003587272.1| cytochrome c oxidase subunit III [Bison bonasus] gi|294679584|gb|ADF29590.1| cytochrome c oxidase subunit III [Bison bonasus] gi|311788320|gb|ADQ12698.1| cytochrome c oxidase subunit III [Bison bonasus] Length = 260 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|261420866|ref|YP_003254548.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp. Y412MC61] gi|297531651|ref|YP_003672926.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp. C56-T3] gi|319768537|ref|YP_004134038.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus sp. Y412MC52] gi|261377323|gb|ACX80066.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp. Y412MC61] gi|297254903|gb|ADI28349.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp. C56-T3] gi|317113403|gb|ADU95895.1| cytochrome aa3 quinol oxidase, subunit III [Geobacillus sp. Y412MC52] Length = 204 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 75/179 (41%), Positives = 114/179 (63%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ +FA F TY VL + +GP ++F++ + + T++LL SS +C A Sbjct: 26 LGFWIFLGAEVALFATLFATYLVLFQRTGSGPTAGELFEVKDVLIETLLLLTSSFTCGLA 85 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + R+ ++WLLVT G FI EI EF H + A Q SAFLSSFF LVG Sbjct: 86 IFEMRRGRIS-GLIAWLLVTLLLGAGFITFEIREFIHYVHEGATMQTSAFLSSFFVLVGT 144 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+ W+ +++IQ+L++G R++ +S++WHFLD++WI +F+ VYL+G+V Sbjct: 145 HGAHVSLGIGWMILIIIQLLQRGFTPKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 203 >gi|94981327|gb|ABF49555.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGYEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|219524222|ref|YP_002456365.1| cytochrome c oxidase subunit III [Lama guanicoe] gi|223976141|ref|YP_002601078.1| cytochrome c oxidase subunit III [Lama glama] gi|270267357|ref|YP_003331061.1| cytochrome c oxidase subunit III [Vicugna vicugna] gi|38602634|emb|CAD98819.1| COIII protein [Lama pacos] gi|108794611|gb|ABG20830.1| cytochrome c oxidase subunit III [Lama guanicoe] gi|108794613|gb|ABG20831.1| cytochrome c oxidase subunit III [Lama glama] gi|108794615|gb|ABG20832.1| cytochrome c oxidase subunit III [Lama pacos] gi|108794617|gb|ABG20833.1| cytochrome c oxidase subunit III [Vicugna vicugna] gi|186968988|gb|ACC97310.1| cytochrome c oxidase subunit III [Lama guanicoe] gi|213389355|gb|ACJ45794.1| cytochrome c oxidase subunit III [Vicugna vicugna] gi|223972338|dbj|BAH23373.1| cytochrome oxidase subunit III [Lama glama] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F+ FF + P I + Sbjct: 68 QGHHTPSVQKGLRYGMVLFIVSEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRTHMLQALFITIALGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTISDSVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|89071030|ref|ZP_01158247.1| Cytochrome c oxidase, aa3-type, subunit III [Oceanicola granulosus HTCC2516] gi|89043418|gb|EAR49635.1| Cytochrome c oxidase, aa3-type, subunit III [Oceanicola granulosus HTCC2516] Length = 266 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 14/200 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA----------VLGKNYAAGPAPIDVF 69 + V G LGF +++MS+ + FAV+F + + PA I+ F Sbjct: 69 GDHTPVVRIGLRLGFILFIMSEVMFFAVWFWNFFKNAMYPMGPESPRVDGQWPPAGIETF 128 Query: 70 DIS-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAH 128 D ++T++LL S + ++A A + L + G++F + YE+ H Sbjct: 129 DPWHLPLINTLILLCSGAAATWAHHALVHENNRQDIKYGLWLAIALGVVFTFFQAYEYTH 188 Query: 129 LISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188 + + ++FF G HG+HV G I+L V + ++ N + Sbjct: 189 ---AAFGFSGNIYGATFFMATGFHGVHVIIGTIFLAVCLARVYAGHFTPTNHVGFEAAAW 245 Query: 189 FWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ +F VY+ G Sbjct: 246 YWHFVDVVWLFLFVAVYVWG 265 >gi|42632194|ref|NP_976184.1| cytochrome c oxidase subunit III [Sebastes schlegelii] gi|38640813|gb|AAR26014.1| cytochrome c oxidase subunit 3 [Sebastes schlegelii] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ +F FF + P I D Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVFLFLGFFWAFYHASLAPTPELGGCWPPTGITTLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +L +S S + +T+ L +T G F ++ E+ Sbjct: 128 EVPLLNTTVLPASGVTLTWTHHSIMEGERKQTIQSLALTILLGFYFTFLQALEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLH+ G +L V +++ + S + + +WHF Sbjct: 185 PFTIADGVYGSTFFVATGFHGLHLIIGSTFLAVCLLRQIPYHFTSEHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|114052825|ref|YP_740273.1| cytochrome c oxidase subunit III [Solea senegalensis] gi|113208355|dbj|BAF03546.1| cytochrome oxidase subunit III [Solea senegalensis] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + +G G +++ S+ L F FF + G P+D F Sbjct: 68 QGHHTPPVQNGLRFGMILFIASEVLFFVGFFWAFYHASLAPTVDLGNTWPPTGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + L +T G+ F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGN-RPQAIQSLALTILLGLYFTFLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 182 YEAPFTLADGVYGTTFFVATGFHGLHVIIGTTFLIVCLLRQTEHHFTSDHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|254455517|ref|ZP_05068946.1| cytochrome-c oxidase [Candidatus Pelagibacter sp. HTCC7211] gi|207082519|gb|EDZ59945.1| cytochrome-c oxidase [Candidatus Pelagibacter sp. HTCC7211] Length = 262 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 9/197 (4%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK------NYAAGPAPIDVFDI 71 + V G +++ S+ + F +F Y + P I+ FD Sbjct: 68 HQGHHTPVVQIHHRYGMTLFIASEVMFFVAWFWAYFDISLFPNEFVGNVWPPKDIETFDP 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 I + ++LL S + S + + L T G F +++ YE+ H Sbjct: 128 WDIPLINTLVLLLSGTTVTWAHHSLIEGDRKGFIQGLTSTVILGFFFTLLQAYEYHH--- 184 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + + F+ G HG HV G I+L V + + + + +WH Sbjct: 185 ATFDYSGHIYGAVFYMATGFHGFHVIIGTIFLAVCLWRGKLGHFTKDHHFGFEAAAWYWH 244 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ +F+ +Y+ G Sbjct: 245 FVDVVWLFLFAAIYIWG 261 >gi|5921867|sp|O48374|COX3_GAZDA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731916|gb|AAB93608.1| cytochrome oxidase subunit III [Nanger dama] gi|2731918|gb|AAB93609.1| cytochrome oxidase subunit III [Nanger dama] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|157056527|gb|ABV02159.1| cytochrome c oxidase subunit 3 [Sus scrofa] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|49147192|ref|YP_025785.1| cytochrome c oxidase subunit 3 [Pseudendoclonium akinetum] gi|33439207|gb|AAQ18744.1| cytochrome c oxidase subunit 3 [Pseudendoclonium akinetum] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 V + G G ++++S+ ++FA FF + P I+ D Sbjct: 66 VYQGHHTRAVQTGIRYGMILFIVSEIMLFAGFFWAFGHSSLAPTIELAGVWPPRGIEALD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 GI ++LLSS + + + + L +T IF + YE+ + Sbjct: 126 PFGIPFLNTLILLSSGASVTWAHYAILLGDRKQGILSLAITIILAAIFTGFQAYEY---V 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S S + S+F+ L GLHG HV G I+L V + ++ K L + +++W Sbjct: 183 SASFTISDSVYGSAFYMLTGLHGTHVLVGTIFLAVCLYRLSKAELRPDHHLGFELAALYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ VF VY G Sbjct: 243 HFVDVVWLIVFIVVYWWG 260 >gi|21908050|ref|NP_663798.1|COX3_16534 cytochrome c oxidase subunit III [Muntiacus reevesi] gi|116235408|ref|YP_794155.1| cytochrome c oxidase subunit III [Muntiacus reevesi micrurus] gi|21842394|gb|AAM77758.1|AF527537_5 cytochrome c oxidase subunit III [Muntiacus reevesi] gi|116006450|gb|ABJ51756.1| cytochrome c oxidase subunit III [Muntiacus reevesi micrurus] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|145208216|gb|ABP38005.1| cytochrome c oxidase subunit III [Bos grunniens] gi|145208230|gb|ABP38018.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532492|gb|ACU81419.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532604|gb|ACU81523.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532632|gb|ACU81549.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532772|gb|ACU81679.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533024|gb|ACU81913.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533178|gb|ACU82056.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533416|gb|ACU82277.1| cytochrome c oxidase subunit III [Bos grunniens] Length = 260 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|91176269|ref|YP_537138.1| cytochrome c oxidase subunit III [Balaenoptera omurai] gi|90265613|dbj|BAE91833.1| cytochrome c oxidase subunit III [Balaenoptera omurai] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMGGNRKH-MLQALFITIALGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQVKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|256532660|gb|ACU81575.1| cytochrome c oxidase subunit III [Bos grunniens] Length = 260 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|13476230|ref|NP_107800.1| cytochrome c oxidase subunit III [Mesorhizobium loti MAFF303099] gi|14026990|dbj|BAB53586.1| cytochrome c oxidase subunit III [Mesorhizobium loti MAFF303099] Length = 292 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA-----------VLGKNY---AAG 62 + + V G +++ S+ + F +F Y + Sbjct: 81 AHEGHHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFAGEVQNYARHTFTGGVWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P ++V D + + ++LL S + S ++ L++T GM+F +++ Sbjct: 141 PKGMEVLDPFHLPLYNTIILLLSGTTVTWAHHSLIHGDRKGLINGLVLTVGLGMLFTMVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+ I + S + ++FF G HG HV G I+L V +I+ +K Sbjct: 201 AYEY---IHAPFGFKDSIYGATFFMATGFHGFHVIIGTIFLLVCLIRAMKGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +FS +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFSAIYVWG 283 >gi|5921876|sp|O47695|COX3_OUROU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731898|gb|AAB93599.1| cytochrome oxidase subunit III [Ourebia ourebi] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|312233444|ref|YP_004021845.1| cytochrome c oxidase subunit III [Cervus eldi] gi|308277994|gb|ADO27630.1| cytochrome c oxidase subunit III [Cervus eldi] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|120586745|ref|YP_961401.1| cytochrome c oxidase subunit III [Elaphodus cephalophus] gi|111380727|gb|ABH09742.1| cytochrome c oxidase subunit III [Elaphodus cephalophus] Length = 261 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + T+ L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGSRNHTLQALFITIALGIYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|223976155|ref|YP_002601091.1| cytochrome c oxidase subunit III [Pecari tajacu] gi|223972352|dbj|BAH23386.1| cytochrome oxidase subunit III [Pecari tajacu] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD-I 71 + G G ++++S+ L F+ FF + P I + + Sbjct: 68 QGHHTSAVQKGLRYGMILFIISEVLFFSGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPM 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T GM F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MLQALFITIALGMYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ LK S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLAVCFLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|238625875|gb|ACR48202.1| cytochrome c oxidase subunit III [Sus scrofa] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSVVQKGLRYGMILFIISEALFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSILLASGVSITWAHHSLMEGDRKH-MIQALSITIALGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|154090900|ref|YP_001403135.1| cytochrome c oxidase subunit III [Hippoglossus hippoglossus] gi|154090928|ref|YP_001403148.1| cytochrome c oxidase subunit III [Hippoglossus stenolepis] gi|153581691|emb|CAO79623.1| cytochrome oxidase subunit III [Hippoglossus hippoglossus] gi|153581705|emb|CAO79636.1| cytochrome oxidase subunit III [Hippoglossus hippoglossus] gi|153581733|emb|CAO79662.1| cytochrome oxidase subunit III [Hippoglossus hippoglossus] gi|153581747|emb|CAO79675.1| cytochrome oxidase subunit III [Hippoglossus stenolepis] gi|153581761|emb|CAO79688.1| cytochrome oxidase subunit III [Hippoglossus stenolepis] gi|153581775|emb|CAO79701.1| cytochrome oxidase subunit III [Hippoglossus stenolepis] gi|153581789|emb|CAO79714.1| cytochrome oxidase subunit III [Hippoglossus stenolepis] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + +T+ L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQTIQSLALTILLGGYFTFLQGLEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGTSFLAVCLLRQILHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|5921872|sp|O47706|COX3_GAZTH RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731924|gb|AAB93612.1| cytochrome oxidase subunit III [Eudorcas thomsonii] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|28301761|ref|NP_783561.1| cytochrome c oxidase subunit III [Muntiacus muntjak] gi|28207783|gb|AAO32134.1| cytochrome c oxidase subunit III [Muntiacus muntjak] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|316926512|ref|YP_004111302.1| cytochrome c oxidase subunit III [Capra hircus] gi|283049410|gb|ADB07176.1| cytochrome c oxidase subunit III [Capra hircus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|147744497|ref|YP_001218797.1| cytochrome c oxidase subunit III [Bos grunniens] gi|75042981|sp|Q5Y4Q4|COX3_BOSMU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|52857755|gb|AAU89112.1| cytochrome c oxidase subunit III [Bos grunniens] gi|145208244|gb|ABP38031.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532464|gb|ACU81393.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532478|gb|ACU81406.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532506|gb|ACU81432.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532520|gb|ACU81445.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532534|gb|ACU81458.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532548|gb|ACU81471.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532562|gb|ACU81484.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532576|gb|ACU81497.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532590|gb|ACU81510.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532618|gb|ACU81536.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532646|gb|ACU81562.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532674|gb|ACU81588.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532688|gb|ACU81601.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532702|gb|ACU81614.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532716|gb|ACU81627.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532744|gb|ACU81653.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532758|gb|ACU81666.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532786|gb|ACU81692.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532800|gb|ACU81705.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532814|gb|ACU81718.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532828|gb|ACU81731.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532842|gb|ACU81744.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532856|gb|ACU81757.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532870|gb|ACU81770.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532884|gb|ACU81783.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532898|gb|ACU81796.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532912|gb|ACU81809.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532926|gb|ACU81822.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532940|gb|ACU81835.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532954|gb|ACU81848.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532968|gb|ACU81861.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532982|gb|ACU81874.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256532996|gb|ACU81887.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533010|gb|ACU81900.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533038|gb|ACU81926.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533052|gb|ACU81939.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533066|gb|ACU81952.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533080|gb|ACU81965.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533094|gb|ACU81978.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533108|gb|ACU81991.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533122|gb|ACU82004.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533136|gb|ACU82017.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533150|gb|ACU82030.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533164|gb|ACU82043.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533192|gb|ACU82069.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533206|gb|ACU82082.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533220|gb|ACU82095.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533234|gb|ACU82108.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533248|gb|ACU82121.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533262|gb|ACU82134.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533276|gb|ACU82147.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533290|gb|ACU82160.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533304|gb|ACU82173.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533332|gb|ACU82199.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533346|gb|ACU82212.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533360|gb|ACU82225.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533374|gb|ACU82238.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533388|gb|ACU82251.1| cytochrome c oxidase subunit III [Bos grunniens] gi|256533402|gb|ACU82264.1| cytochrome c oxidase subunit III [Bos grunniens] Length = 260 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|119387828|ref|YP_918862.1| cytochrome c oxidase, subunit III [Paracoccus denitrificans PD1222] gi|461329|emb|CAA55034.1| cytochrome ba(3) [Paracoccus denitrificans] gi|119378403|gb|ABL73166.1| cytochrome ba3 quinol oxidase subunit 3 [Paracoccus denitrificans PD1222] Length = 205 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 110/204 (53%), Positives = 142/204 (69%), Gaps = 2/204 (0%) Query: 7 GKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI 66 + ++ + + T LGFW+YLMSDCLMFAV F Y VLG ++AAGP P Sbjct: 4 ATTDTMRQYWELEPHHHP-EGASTSLGFWVYLMSDCLMFAVLFAVYGVLGTSFAAGPGPK 62 Query: 67 DVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 D+FD+ + V+T +LLLSS++ FAMLA T+ WL VT FFG+ F+ +E+YEF Sbjct: 63 DLFDLELVAVNTAMLLLSSITFGFAMLAMGKGDQR-GTLRWLAVTLFFGLCFLAIELYEF 121 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 HLI + A PQRS FLS+FF LVG HGLHV FG IWL L++QI + GLI NQRR++CL Sbjct: 122 HHLIHIGAGPQRSGFLSAFFTLVGTHGLHVTFGSIWLVTLMVQITRTGLIPANQRRMVCL 181 Query: 187 SMFWHFLDLIWICVFSFVYLMGVV 210 SMFWHFLD+IWI VF+FVYL+G++ Sbjct: 182 SMFWHFLDVIWIGVFTFVYLLGMI 205 >gi|226453390|ref|YP_002791035.1| cytochrome c oxidase subunit III [Bison bison] gi|157778810|gb|ABV70939.1| cytochrome c oxidase subunit III [Bison bison] gi|294959389|gb|ADF48930.1| cytochrome c oxidase subunit III [Bison bison] gi|294959403|gb|ADF48943.1| cytochrome c oxidase subunit III [Bison bison] gi|294959417|gb|ADF48956.1| cytochrome c oxidase subunit III [Bison bison] gi|294959431|gb|ADF48969.1| cytochrome c oxidase subunit III [Bison bison] gi|294959445|gb|ADF48982.1| cytochrome c oxidase subunit III [Bison bison] gi|294959459|gb|ADF48995.1| cytochrome c oxidase subunit III [Bison bison] gi|294959473|gb|ADF49008.1| cytochrome c oxidase subunit III [Bison bison] gi|294959487|gb|ADF49021.1| cytochrome c oxidase subunit III [Bison bison] gi|294959501|gb|ADF49034.1| cytochrome c oxidase subunit III [Bison bison] gi|294959515|gb|ADF49047.1| cytochrome c oxidase subunit III [Bison bison] gi|294959529|gb|ADF49060.1| cytochrome c oxidase subunit III [Bison bison] gi|294959543|gb|ADF49073.1| cytochrome c oxidase subunit III [Bison bison] gi|294959557|gb|ADF49086.1| cytochrome c oxidase subunit III [Bison bison] gi|294959571|gb|ADF49099.1| cytochrome c oxidase subunit III [Bison bison] gi|294959585|gb|ADF49112.1| cytochrome c oxidase subunit III [Bison bison] gi|294959599|gb|ADF49125.1| cytochrome c oxidase subunit III [Bison bison] gi|294959613|gb|ADF49138.1| cytochrome c oxidase subunit III [Bison bison] gi|294959627|gb|ADF49151.1| cytochrome c oxidase subunit III [Bison bison] gi|294959641|gb|ADF49164.1| cytochrome c oxidase subunit III [Bison bison] gi|294959655|gb|ADF49177.1| cytochrome c oxidase subunit III [Bison bison] gi|294959669|gb|ADF49190.1| cytochrome c oxidase subunit III [Bison bison] gi|294959683|gb|ADF49203.1| cytochrome c oxidase subunit III [Bison bison] gi|294959697|gb|ADF49216.1| cytochrome c oxidase subunit III [Bison bison] gi|294959711|gb|ADF49229.1| cytochrome c oxidase subunit III [Bison bison] gi|294959725|gb|ADF49242.1| cytochrome c oxidase subunit III [Bison bison] gi|294959739|gb|ADF49255.1| cytochrome c oxidase subunit III [Bison bison] gi|294959753|gb|ADF49268.1| cytochrome c oxidase subunit III [Bison bison] gi|294959767|gb|ADF49281.1| cytochrome c oxidase subunit III [Bison bison] gi|294959781|gb|ADF49294.1| cytochrome c oxidase subunit III [Bison bison] gi|294959795|gb|ADF49307.1| cytochrome c oxidase subunit III [Bison bison] gi|294959809|gb|ADF49320.1| cytochrome c oxidase subunit III [Bison bison] Length = 260 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGIYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|284177734|ref|YP_003406735.1| cytochrome c oxidase subunit III [Moschus moschiferus] gi|213990236|gb|ACJ60538.1| cytochrome c oxidase subunit III [Moschus moschiferus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|38707457|ref|NP_944717.1| cytochrome c oxidase subunit III [Inia geoffrensis] gi|38602536|emb|CAD87994.1| cytochrome c oxidase polypeptide III [Inia geoffrensis] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKHA-LQALFITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + I+ +K S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFIRHMKFHFTSTHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|63025133|ref|YP_232839.1| cytochrome c oxidase subunit III [Cervus nippon centralis] gi|62751077|dbj|BAD95768.1| cytochrome c oxidase subunit3 [Cervus nippon centralis] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|153581719|emb|CAO79649.1| cytochrome oxidase subunit III [Hippoglossus hippoglossus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + +T+ L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQTIQSLALTILLGGYFTFLQGLEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 183 -EAPFTIADGVYGAAFFVATGFHGLHVLIGTSFLAVCLLRQILHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|207559917|gb|ACI24516.1| cytochrome c oxidase subunit 3 [Hemitragus jemlahicus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|19919708|gb|AAM08332.1| cytochrome oxidase subunit III [Bos taurus] gi|19919722|gb|AAM08345.1| cytochrome oxidase subunit III [Bos taurus] gi|20149074|gb|AAM12795.1| cytochrome oxidase subunit III [Bos taurus] gi|20149088|gb|AAM12808.1| cytochrome oxidase subunit III [Bos taurus] gi|37960021|gb|AAP47834.1| cytochrome oxidase subunit III [Bos taurus] gi|37960035|gb|AAP47847.1| cytochrome oxidase subunit III [Bos taurus] gi|37960049|gb|AAP47860.1| cytochrome oxidase subunit III [Bos taurus] gi|37960063|gb|AAP47873.1| cytochrome oxidase subunit III [Bos taurus] Length = 267 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5921874|sp|O47699|COX3_MADGU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731906|gb|AAB93603.1| cytochrome oxidase subunit III [Madoqua guentheri] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGIYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|37545832|gb|AAM95736.1| cytochrome c oxidase subunit 3 [Bos indicus] Length = 267 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGIYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|297593516|gb|ADI47475.1| cytochrome oxidase subunit III [Tetrapturus georgii] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ F FF + G +D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVPFFLGFFWAFYHSSLAPTPELGGHWPPTGITALDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E++ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEAK-RKQAIQSLALTILLGAYFTFLQALEYS-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++F G HGLHV G +L V +++ ++ S + + + Sbjct: 183 -EAPFTIADGVYGATFSVATGFHGLHVLIGSTFLAVCLLRQIRHHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|5921866|sp|O47708|COX3_GAZCU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731928|gb|AAB93614.1| cytochrome oxidase subunit III [Gazella cuvieri] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|223976113|ref|YP_002600876.1| cytochrome c oxidase subunit III [Antilope cervicapra] gi|5921861|sp|O47702|COX3_ANTCE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731912|gb|AAB93606.1| cytochrome oxidase subunit III [Antilope cervicapra] gi|223972282|dbj|BAH23321.1| cytochrome oxidase subunit III [Antilope cervicapra] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|223976099|ref|YP_002600796.1| cytochrome c oxidase subunit III [Capricornis crispus] gi|223972380|dbj|BAH23412.1| cytochrome oxidase subunit III [Capricornis crispus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|226464068|ref|YP_002735049.1| cytochrome c oxidase subunit III [Neuroctenus parus] gi|166897824|gb|ABZ02065.1| cytochrome c oxidase subunit III [Neuroctenus parus] Length = 260 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 11/194 (5%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFD-ISGI 74 + +G LG ++++S+ + F FF + + + P I F+ + Sbjct: 70 HTLKVVNGLKLGMILFIVSEVMFFVSFFWAFLHSSLSPSVEIGMIWPPKGIQPFNPMEIP 129 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T +LL S ++ ++A + TV L T G++F I++ YE+ + Sbjct: 130 LLNTTILLCSGITVTWAHHSIMEGNHKSTTV-SLATTVILGIMFTILQGYEY---LEASF 185 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 S + S FF G HG+HV G +L V +++ + S + + +WHF+D Sbjct: 186 CIADSIYGSVFFVSTGFHGIHVIIGTTFLGVCLMRHMAHQFSSTHHFGFEAAAWYWHFVD 245 Query: 195 LIWICVFSFVYLMG 208 ++W+ ++ VY G Sbjct: 246 VVWLFLYIMVYWWG 259 >gi|315125954|ref|YP_004067957.1| cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C) [Pseudoalteromonas sp. SM9913] gi|315014468|gb|ADT67806.1| cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C) [Pseudoalteromonas sp. SM9913] Length = 210 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 99/195 (50%), Positives = 136/195 (69%), Gaps = 4/195 (2%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + + ++ D T GFW+YLM+DCL+FA FF TYAVL N A G + D+F++ + Sbjct: 20 HTHEHHDTSGD---TIFGFWLYLMTDCLLFASFFATYAVLYMNTAGGVSGKDIFELDFVA 76 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T LL+SS++ FAM+A+ ++ T+ WL VT G +FI MEIYEF HLI Sbjct: 77 VETAALLISSITFGFAMIAAQGQK-KALTLGWLAVTFCLGAVFIGMEIYEFHHLIVHGNG 135 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 PQ+SAFL+SFF+LVGLHGLHV GLIW+ +++I+++K+GL RL CLS+FWHFLD+ Sbjct: 136 PQQSAFLTSFFSLVGLHGLHVTAGLIWMSIMMIEVIKRGLGKQTVTRLSCLSLFWHFLDI 195 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+ VYLMG + Sbjct: 196 VWICVFTVVYLMGAM 210 >gi|292486454|ref|YP_003541090.1| cytochrome c oxidase subunit III [Bos primigenius] gi|28381353|sp|P00415|COX3_BOVIN RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|40889825|pdb|1V54|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|40889838|pdb|1V54|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|40889851|pdb|1V55|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Reduced State gi|40889864|pdb|1V55|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Reduced State gi|145579211|pdb|2DYR|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|145579224|pdb|2DYR|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|149241473|pdb|2EIJ|C Chain C, Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|149241486|pdb|2EIJ|P Chain P, Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|149241508|pdb|2EIK|C Chain C, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|149241521|pdb|2EIK|P Chain P, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|149241538|pdb|2EIL|C Chain C, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Oxidized State gi|149241551|pdb|2EIL|P Chain P, Cadmium Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Oxidized State gi|149241568|pdb|2EIM|C Chain C, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|149241581|pdb|2EIM|P Chain P, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|149241598|pdb|2EIN|C Chain C, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Oxidized State gi|149241611|pdb|2EIN|P Chain P, Zinc Ion Binding Structure Of Bovine Heart Cytochrome C Oxidase In The Fully Oxidized State gi|224036259|pdb|2ZXW|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State (1-S X-Ray Exposure Dataset) gi|224036272|pdb|2ZXW|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State (1-S X-Ray Exposure Dataset) gi|284055448|pdb|3ABL|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State (15-S X-Ray Exposure Dataset) gi|284055461|pdb|3ABL|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State (15-S X-Ray Exposure Dataset) gi|284055474|pdb|3ABM|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State (200-S X-Ray Exposure Dataset) gi|284055487|pdb|3ABM|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State (200-S X-Ray Exposure Dataset) gi|290789921|pdb|3ABK|C Chain C, Bovine Heart Cytochrome C Oxidase At The No-Bound Fully Reduced State (50k) gi|290789934|pdb|3ABK|P Chain P, Bovine Heart Cytochrome C Oxidase At The No-Bound Fully Reduced State (50k) gi|295321544|pdb|3AG1|C Chain C, Bovine Heart Cytochrome C Oxidase In The Carbon Monoxide-Bou Reduced State At 280 K gi|295321557|pdb|3AG1|P Chain P, Bovine Heart Cytochrome C Oxidase In The Carbon Monoxide-Bou Reduced State At 280 K gi|295321570|pdb|3AG2|C Chain C, Bovine Heart Cytochrome C Oxidase In The Carbon Monoxide-Bou Reduced State At 100 K gi|295321583|pdb|3AG2|P Chain P, Bovine Heart Cytochrome C Oxidase In The Carbon Monoxide-Bou Reduced State At 100 K gi|295321596|pdb|3AG3|C Chain C, Bovine Heart Cytochrome C Oxidase In The Nitric Oxide-Bound Reduced State At 100 K gi|295321609|pdb|3AG3|P Chain P, Bovine Heart Cytochrome C Oxidase In The Nitric Oxide-Bound Reduced State At 100 K gi|295321622|pdb|3AG4|C Chain C, Bovine Heart Cytochrome C Oxidase In The Cyanide Ion-Bound F Reduced State At 100 K gi|295321635|pdb|3AG4|P Chain P, Bovine Heart Cytochrome C Oxidase In The Cyanide Ion-Bound F Reduced State At 100 K gi|324357505|pdb|2Y69|C Chain C, Bovine Heart Cytochrome C Oxidase Re-Refined With Molecular Oxygen gi|324357518|pdb|2Y69|P Chain P, Bovine Heart Cytochrome C Oxidase Re-Refined With Molecular Oxygen gi|33321654|gb|AAQ06586.1| cytochrome c oxidase subunit 3 [Bos indicus] gi|33321668|gb|AAQ06599.1| cytochrome c oxidase subunit 3 [Bos taurus] gi|291463829|gb|ADE05533.1| cytochrome c oxidase subunit III [Bos primigenius] gi|306977274|gb|ADN11781.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977288|gb|ADN11794.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977302|gb|ADN11807.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977316|gb|ADN11820.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977330|gb|ADN11833.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977344|gb|ADN11846.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977358|gb|ADN11859.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977372|gb|ADN11872.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977386|gb|ADN11885.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977400|gb|ADN11898.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977484|gb|ADN11976.1| cytochrome c oxidase subunit III [Bos taurus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|5921870|sp|O47710|COX3_GAZSA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731940|gb|AAB93620.1| cytochrome oxidase subunit III [Gazella saudiya] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|71274826|ref|ZP_00651114.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Dixon] gi|71899872|ref|ZP_00682021.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1] gi|170729929|ref|YP_001775362.1| cytochrome o ubiquinol oxidase subunit III [Xylella fastidiosa M12] gi|71164558|gb|EAO14272.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Dixon] gi|71730389|gb|EAO32471.1| Cytochrome c oxidase, subunit III [Xylella fastidiosa Ann-1] gi|167964722|gb|ACA11732.1| cytochrome o ubiquinol oxidase subunit III [Xylella fastidiosa M12] Length = 202 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 126/191 (65%), Gaps = 1/191 (0%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 D T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T Sbjct: 13 DHAHHDTGDNTVFGFWVYLMSDCLIFAGLFATYAVLVGATVDGPTAKELFDLKFVLVETF 72 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SSL+ FAM+A+ + I WL+VTA FG+ F+ ME+YEF HLI A P RS Sbjct: 73 LLLFSSLTFGFAMIAAHKRH-IPALYGWLMVTALFGLGFLGMELYEFHHLIQEGAGPGRS 131 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWIC 199 AFLS+FF LVG HGLHV GL+W+ +LVIQI+K GL N RL CLS+FWHFL +IWI Sbjct: 132 AFLSAFFTLVGTHGLHVASGLLWMLILVIQIVKNGLTPRNSTRLACLSLFWHFLGVIWIG 191 Query: 200 VFSFVYLMGVV 210 VF+ VYL+G + Sbjct: 192 VFTIVYLLGAL 202 >gi|270153151|gb|ACZ61162.1| cytochrome c oxidase subunit III [Capra hircus] Length = 260 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|157690791|ref|YP_001488948.1| cytochrome c oxidase subunit III [Camelus dromedarius] gi|157394468|gb|ABV53314.1| cytochrome c oxidase subunit III [Camelus dromedarius] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRAHMLQALFITIALGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|150378418|ref|YP_001315078.1| cytochrome c oxidase subunit III [Camelus ferus] gi|122003957|gb|ABM65791.1| cytochrome oxidase subunit III [Camelus ferus] gi|134302897|gb|ABO70712.1| cytochrome c oxidase subunit III [Camelus ferus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRAHMLQALFITIALGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|88766327|ref|YP_052703.2| cytochrome c oxidase subunit III [Bos indicus] gi|116243186|sp|Q576B8|COX3_BOSIN RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|306977414|gb|ADN11911.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977428|gb|ADN11924.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977442|gb|ADN11937.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977456|gb|ADN11950.1| cytochrome c oxidase subunit III [Bos taurus] gi|306977470|gb|ADN11963.1| cytochrome c oxidase subunit III [Bos taurus] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGIYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|207559945|gb|ACI24542.1| cytochrome c oxidase subunit 3 [Capricornis crispus] gi|207559959|gb|ACI24555.1| cytochrome c oxidase subunit 3 [Capricornis sumatraensis] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|256532730|gb|ACU81640.1| cytochrome c oxidase subunit III [Bos grunniens] Length = 260 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQQGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|207559931|gb|ACI24529.1| cytochrome c oxidase subunit 3 [Naemorhedus griseus] Length = 261 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|5921875|sp|O47698|COX3_NEOMO RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731904|gb|AAB93602.1| cytochrome oxidase subunit III [Neotragus moschatus] Length = 261 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGISPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|115494894|ref|YP_778675.1| cytochrome c oxidase subunit III [Rusa unicolor swinhoei] gi|116014303|ref|YP_788149.1| cytochrome c oxidase subunit III [Cervus nippon taiouanus] gi|288903457|ref|YP_003434175.1| cytochrome c oxidase subunit III [Cervus nippon hortulorum] gi|114329510|gb|ABI64274.1| cytochrome c oxidase subunit 3 [Rusa unicolor swinhoei] gi|115531527|gb|ABJ09686.1| cytochrome c oxidase subunit 3 [Cervus nippon taiouanus] gi|117649975|gb|ABK54031.1| cytochrome c oxidase subunit III [Cervus nippon taiouanus] gi|117650153|gb|ABK54081.1| cytochrome c oxidase subunit III [Rusa unicolor swinhoei] gi|285013423|gb|ADC32702.1| cytochrome c oxidase subunit III [Cervus nippon hortulorum] gi|309399273|gb|ADO78907.1| cytochrome c oxidase subunit III [Cervus nippon hortulorum] Length = 261 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|5921860|sp|O47691|COX3_AEPME RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731890|gb|AAB93595.1| cytochrome oxidase subunit III [Aepyceros melampus] Length = 261 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|156743494|ref|YP_001433623.1| cytochrome c oxidase subunit III [Roseiflexus castenholzii DSM 13941] gi|156234822|gb|ABU59605.1| cytochrome c oxidase subunit III [Roseiflexus castenholzii DSM 13941] Length = 203 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 4/195 (2%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY---AAGPAPIDVFDIS 72 + + + D LG W ++ S+ L FA TY V P + DI Sbjct: 10 HATTAHHTSLGVDNRKLGVWAFIGSETLFFATLITTYFVFAPVNRARPDFQDPREFLDIE 69 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 V +LL SSL+ A+ AS T L G+ FI ++YEF HL Sbjct: 70 LTTVLASILLASSLTMVLALSASKRGDRRWFTTWLLATVG-LGLAFIGGQVYEFNHLYHE 128 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S F ++FF L G HG HV G+IWL + ++ N + ++WHF Sbjct: 129 GLTLSSSLFGTTFFVLTGFHGTHVAIGVIWLLSVFFKVRTYPNSPENAMDVEIAGLYWHF 188 Query: 193 LDLIWICVFSFVYLM 207 +DL+W+ +F VYL+ Sbjct: 189 VDLVWVAIFVLVYLI 203 >gi|223976127|ref|YP_002600983.1| cytochrome c oxidase subunit III [Giraffa camelopardalis angolensis] gi|223972310|dbj|BAH23347.1| cytochrome oxidase subunit III [Giraffa camelopardalis] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD-I 71 + G G ++++S+ L F FF + P I + + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPM 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITISLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|114707978|ref|ZP_01440870.1| Cytochrome c oxidase, subunit III [Fulvimarina pelagi HTCC2506] gi|114536607|gb|EAU39739.1| Cytochrome c oxidase, subunit III [Fulvimarina pelagi HTCC2506] Length = 208 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 104/190 (54%), Positives = 136/190 (71%), Gaps = 1/190 (0%) Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV 80 + T LGFWIYLMSDCL+FAV F TY VLG NYAAGP P D+F++ + V+T + Sbjct: 20 EHGHETGSSTMLGFWIYLMSDCLIFAVLFATYGVLGANYAAGPRPEDIFELPLLAVNTAM 79 Query: 81 LLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140 LL SS++ FAM+A ++ + WL VT FG +F+ +E+YEF I A PQRS Sbjct: 80 LLFSSITYGFAMIAMQARQTKM-VLLWLAVTGVFGALFLGIELYEFGVFIGEGASPQRSG 138 Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200 FLS+FF LVG HGLHV FG++WL L++QI K GLIS N+RR++CLSMFWHFLD++WI V Sbjct: 139 FLSAFFTLVGTHGLHVTFGIVWLVTLMVQIQKYGLISANRRRIMCLSMFWHFLDVVWIGV 198 Query: 201 FSFVYLMGVV 210 F+FVYL+ ++ Sbjct: 199 FTFVYLIRMI 208 >gi|150375659|ref|YP_001315065.1| cytochrome c oxidase subunit III [Camelus bactrianus] gi|122003946|gb|ABM65783.1| cytochrome oxidase subunit III [Camelus bactrianus] gi|134302860|gb|ABO70678.1| cytochrome c oxidase subunit III [Camelus bactrianus] gi|134302874|gb|ABO70691.1| cytochrome c oxidase subunit III [Camelus bactrianus] gi|134302883|gb|ABO70699.1| cytochrome c oxidase subunit III [Camelus ferus] gi|223972296|dbj|BAH23334.1| cytochrome oxidase subunit III [Camelus bactrianus] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRAHMLQALFITIALGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLTVCFLRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|207560015|gb|ACI24607.1| cytochrome c oxidase subunit 3 [Rupicapra pyrenaica] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|5921877|sp|O47692|COX3_PELCP RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731892|gb|AAB93596.1| cytochrome oxidase subunit III [Pelea capreolus] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPSVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|5921889|sp|O47689|COX3_TRAST RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2707251|gb|AAB92240.1| cytochrome oxidase subunit III [Tragelaphus strepsiceros] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|60101831|ref|YP_209211.1| cytochrome c oxidase subunit III [Bos taurus] gi|237869049|ref|YP_002907380.1| cytochrome c oxidase subunit III [Bos javanicus] gi|42521319|gb|AAS18248.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410901|gb|AAV88116.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410915|gb|AAV88129.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410929|gb|AAV88142.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410957|gb|AAV88168.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410971|gb|AAV88181.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410985|gb|AAV88194.1| cytochrome c oxidase subunit III [Bos taurus] gi|56410999|gb|AAV88207.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411013|gb|AAV88220.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411027|gb|AAV88233.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411041|gb|AAV88246.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411055|gb|AAV88259.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411069|gb|AAV88272.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411083|gb|AAV88285.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411097|gb|AAV88298.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411111|gb|AAV88311.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411125|gb|AAV88324.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411139|gb|AAV88337.1| cytochrome c oxidase subunit III [Bos taurus] gi|56411153|gb|AAV88350.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987489|gb|AAZ16539.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987503|gb|AAZ16552.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987517|gb|AAZ16565.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987531|gb|AAZ16578.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987559|gb|AAZ16604.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987573|gb|AAZ16617.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987587|gb|AAZ16630.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987601|gb|AAZ16643.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987615|gb|AAZ16656.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987629|gb|AAZ16669.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987643|gb|AAZ16682.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987671|gb|AAZ16708.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987685|gb|AAZ16721.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987699|gb|AAZ16734.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987713|gb|AAZ16747.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987727|gb|AAZ16760.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987741|gb|AAZ16773.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987755|gb|AAZ16786.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987769|gb|AAZ16799.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987783|gb|AAZ16812.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987797|gb|AAZ16825.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987811|gb|AAZ16838.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987825|gb|AAZ16851.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987839|gb|AAZ16864.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987853|gb|AAZ16877.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987867|gb|AAZ16890.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987881|gb|AAZ16903.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987895|gb|AAZ16916.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987909|gb|AAZ16929.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987937|gb|AAZ16955.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987951|gb|AAZ16968.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987965|gb|AAZ16981.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987993|gb|AAZ17007.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988007|gb|AAZ17020.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988021|gb|AAZ17033.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988035|gb|AAZ17046.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988049|gb|AAZ17059.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988063|gb|AAZ17072.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988077|gb|AAZ17085.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988105|gb|AAZ17111.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988119|gb|AAZ17124.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988133|gb|AAZ17137.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778026|gb|ABV70211.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778040|gb|ABV70224.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778054|gb|ABV70237.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778068|gb|ABV70250.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778082|gb|ABV70263.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778096|gb|ABV70276.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778110|gb|ABV70289.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778124|gb|ABV70302.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778138|gb|ABV70315.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778152|gb|ABV70328.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778166|gb|ABV70341.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778180|gb|ABV70354.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778194|gb|ABV70367.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778208|gb|ABV70380.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778222|gb|ABV70393.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778236|gb|ABV70406.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778250|gb|ABV70419.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778264|gb|ABV70432.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778278|gb|ABV70445.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778292|gb|ABV70458.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778306|gb|ABV70471.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778320|gb|ABV70484.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778334|gb|ABV70497.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778348|gb|ABV70510.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778362|gb|ABV70523.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778376|gb|ABV70536.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778390|gb|ABV70549.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778404|gb|ABV70562.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778418|gb|ABV70575.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778432|gb|ABV70588.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778446|gb|ABV70601.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778460|gb|ABV70614.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778474|gb|ABV70627.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778488|gb|ABV70640.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778502|gb|ABV70653.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778516|gb|ABV70666.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778530|gb|ABV70679.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778544|gb|ABV70692.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778558|gb|ABV70705.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778572|gb|ABV70718.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778586|gb|ABV70731.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778600|gb|ABV70744.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778614|gb|ABV70757.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778628|gb|ABV70770.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778642|gb|ABV70783.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778670|gb|ABV70809.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778712|gb|ABV70848.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778726|gb|ABV70861.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778740|gb|ABV70874.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778754|gb|ABV70887.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778782|gb|ABV70913.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778796|gb|ABV70926.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501221|gb|ACQ73755.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501235|gb|ACQ73768.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501249|gb|ACQ73781.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501263|gb|ACQ73794.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501319|gb|ACQ73846.1| cytochrome c oxidase subunit III [Bos taurus] gi|233142551|gb|ACQ91128.1| cytochrome c oxidase subunit III [Bos javanicus] gi|237780768|gb|ACR19413.1| cytochrome c oxidase subunit III [Bos taurus] gi|237780782|gb|ACR19426.1| cytochrome c oxidase subunit III [Bos taurus] gi|294679598|gb|ADF29603.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959823|gb|ADF49333.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959851|gb|ADF49359.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959865|gb|ADF49372.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959879|gb|ADF49385.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959907|gb|ADF49411.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959949|gb|ADF49450.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959963|gb|ADF49463.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959977|gb|ADF49476.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959991|gb|ADF49489.1| cytochrome c oxidase subunit III [Bos taurus] gi|294960005|gb|ADF49502.1| cytochrome c oxidase subunit III [Bos taurus] gi|294960019|gb|ADF49515.1| cytochrome c oxidase subunit III [Bos taurus] Length = 260 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|256533318|gb|ACU82186.1| cytochrome c oxidase subunit III [Bos grunniens] Length = 260 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|126215508|ref|YP_001054756.1| cytochrome c oxidase subunit III [Anomalurus sp. GP-2005] gi|118140634|emb|CAJ43818.1| cytochrome c oxidase subunit 3 [Anomalurus sp. GP-2005] Length = 262 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 11/199 (5%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG- 73 + G G ++++S+ L F FF + + L + G + I Sbjct: 66 TYQGHHTFNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTHDLGGSWPPTGIIPLN 125 Query: 74 ----IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++T VLL S +S ++A + + + + L +T G+ F +++ E+ Sbjct: 126 PLEVPLLNTSVLLASGVSITWAHHSLM-QGNRTQMIQALSITIILGLYFTLLQTSEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ L S + + + Sbjct: 182 FETPFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLTYHFTSQHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|38707633|ref|NP_944704.1| cytochrome c oxidase subunit III [Platanista minor] gi|38602522|emb|CAD87981.1| cytochrome c oxidase polypeptide III [Platanista minor] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIYPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F ++++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MIHALSITIMLGLYFTLLQMSEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HG HV G +L V +++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFMATGFHGFHVIIGSTFLIVCLLRQMKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|18034354|gb|AAL57482.1|AF419238_1 cytochrome oxidase subunit 3 [Bos indicus] gi|70987475|gb|AAZ16526.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987923|gb|AAZ16942.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778656|gb|ABV70796.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778768|gb|ABV70900.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501277|gb|ACQ73807.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501291|gb|ACQ73820.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501305|gb|ACQ73833.1| cytochrome c oxidase subunit III [Bos taurus] gi|229501333|gb|ACQ73859.1| cytochrome c oxidase subunit III [Bos taurus] gi|270486453|gb|ACZ83017.1| cytochrome c oxidase subunit III [Bos indicus] Length = 260 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGIYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|113475448|ref|YP_721509.1| cytochrome c oxidase III [Trichodesmium erythraeum IMS101] gi|110166496|gb|ABG51036.1| cytochrome c oxidase, subunit III [Trichodesmium erythraeum IMS101] Length = 211 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 5/190 (2%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + + D G +L S+ LMF F Y + N P ++ ++T Sbjct: 23 EAEHHEEHQDLRVFGLLTFLASESLMFGGLFAAYLIYRTNAGVWPPEETEVELLLPTINT 82 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 I+L+ SS A + W LVTA G+IF+ ++YE+ ++ Sbjct: 83 IILVSSSFVIHKGDTAIKK-NDVSGMRLWYLVTAIMGIIFLGGQVYEYM---TLGYGLTT 138 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLIW 197 + F + F+ + G HGLHVF G++ + ++ + + + ++WHF+D+IW Sbjct: 139 NVFSNCFYLMTGFHGLHVFVGVLLILGVLWRSRRAGHYNEEKHVGIEMAEIYWHFVDIIW 198 Query: 198 ICVFSFVYLM 207 I +F+ +Y++ Sbjct: 199 IVLFTLIYIL 208 >gi|255077736|gb|ACU00371.1| cytochrome c oxidase subunit III [Proteus anguinus] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFIGFFWAFYNSSLAPTPELGECWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + T L +T G+ F I++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMHGTRKEAT-QSLTLTVALGLYFTILQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G ++L V + + + + + + Sbjct: 182 YEAPFTIADGIYGSTFFVATGFHGLHVIIGSLFLTVCLFRQVNYHFTLNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|38707619|ref|NP_944678.1| cytochrome c oxidase subunit III [Hyperoodon ampullatus] gi|38602494|emb|CAD87955.1| cytochrome c oxidase polypeptide III [Hyperoodon ampullatus] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPMVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGIYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ +K S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLLVCFLRQMKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|187250416|ref|YP_001874833.1| cytochrome c oxidase subunit III [Naemorhedus swinhoei] gi|145967295|gb|ABP99011.1| cytochrome c oxidase subunit 3 [Naemorhedus swinhoei] Length = 260 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|207559847|gb|ACI24451.1| cytochrome c oxidase subunit 3 [Capra ibex] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPPVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRSHMLQALFITITLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|56410943|gb|AAV88155.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987545|gb|AAZ16591.1| cytochrome c oxidase subunit III [Bos taurus] gi|70987979|gb|AAZ16994.1| cytochrome c oxidase subunit III [Bos taurus] gi|70988091|gb|AAZ17098.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959837|gb|ADF49346.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959893|gb|ADF49398.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959921|gb|ADF49424.1| cytochrome c oxidase subunit III [Bos taurus] gi|294959935|gb|ADF49437.1| cytochrome c oxidase subunit III [Bos taurus] Length = 260 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYISIYWWG 260 >gi|133755334|ref|NP_008607.2|COX3_15064 cytochrome c oxidase subunit III [Erinaceus europaeus] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDIS 72 + + G G ++++S+ L F FF + PA I + Sbjct: 68 QGHHTPIVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLVPTTELGGYWPPAGIKPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S ++ + L+VT G+ F +++I E+ Sbjct: 128 EVPLLNTAVLLASGVSVTWAHHSILEKDRINAIQALIVTISLGLYFTLLQIMEY---YES 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S+FF G HG HV G +LF+ +++ LK S + + +WHF Sbjct: 185 PFTIADSVYGSTFFMATGFHGFHVIIGSSFLFICLMRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|38707605|ref|NP_944691.1| cytochrome c oxidase subunit III [Berardius bairdii] gi|38602508|emb|CAD87968.1| cytochrome c oxidase polypeptide III [Berardius bairdii] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EIPLLNTSVLLASGVSITWAHHSLMEGSRKH-MLQALFITIMLGIYFTLLQASEYH---E 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ +K S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQMKFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|299829068|ref|YP_003735085.1| cytochrome c oxidase subunit III [Chimaera fulva] gi|298110894|gb|ADI57846.1| cytochrome c oxidase subunit III [Chimaera fulva] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +P+D F Sbjct: 68 QGHHTPPVQKGLRWGMILFITSEVLFFLGFFWAFYHSSLAPTPELGNCWPPTGISPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T +LL S ++ ++A + + L +T G+ F +++ E+ Sbjct: 128 EVP--LLNTAILLASGVTITWAHHSLMEGS-RKEMTQALSLTVILGLYFTLLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ ++ S + + + Sbjct: 182 YEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLMVCLMRQIQYHFTSMHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|5921887|sp|O47688|COX3_TRASP RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2707249|gb|AAB92239.1| cytochrome oxidase subunit III [Tragelaphus spekii] Length = 261 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I D Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLDPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGTTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|84488587|ref|YP_448952.1| cytochrome c oxidase subunit III [Cervus elaphus] gi|84095038|dbj|BAE66706.1| cytochrome c oxidase subunit 3 [Cervus elaphus] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|62288055|sp|P68088|COX3_GAZGR RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|62288056|sp|P68089|COX3_GAZSO RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731914|gb|AAB93607.1| cytochrome oxidase subunit III [Nanger granti] gi|2731920|gb|AAB93610.1| cytochrome oxidase subunit III [Nanger soemmerringii] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|16117431|ref|NP_395446.1| cytochrome c oxidase subunit III [Chimaera monstrosa] gi|16026859|emb|CAC84205.1| cyt oxidase subunit 3 [Chimaera monstrosa] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + G +P+D F Sbjct: 68 QGHHTPPVQKGLRWGMILFITSEILFFLGFFWAFYHSSLAPTPELGNCWPPTGISPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T +LL S ++ ++A + + L +T G+ F +++ E+ Sbjct: 128 EVP--LLNTAILLASGVTITWAHHSLMEGS-RKEMTQALTLTVILGVYFTLLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ ++ S + + + Sbjct: 182 YEAPFTISDGVYGSTFFVATGFHGLHVIIGTTFLMVCLVRQIQYHFTSMHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|240266347|ref|YP_002970600.1| cytochrome c oxidase subunit III [Thermophis zhaoermii] gi|238800136|gb|ACR55927.1| cytochrome c oxidase subunit III [Thermophis zhaoermii] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGITPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + + +LLSS + + K + + L+ T G F +++ E+ Sbjct: 126 PTEVPLLNTAVLLSSGATITWSHHATMKGNKKEAANALMTTIVLGAYFTALQVSEYQ--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLIVCLLRLIQHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLLLYISVYWWG 260 >gi|2731956|gb|AAB93628.1| cytochrome oxidase subunit III [Gazella gazella] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMIQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|207559833|gb|ACI24438.1| cytochrome c oxidase subunit 3 [Capra falconeri] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|222085123|ref|YP_002543653.1| cytochrome-c oxidase [Agrobacterium radiobacter K84] gi|221722571|gb|ACM25727.1| cytochrome-c oxidase [Agrobacterium radiobacter K84] Length = 311 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA-----------VLGKNYAAG--- 62 + + V G +++ S+ + F +F Y + G Sbjct: 100 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDVSLFPNEAIQASRTAFLGGQFP 159 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P ++V D + + ++LL S + + + L +T G F ++ Sbjct: 160 PKGVEVLDPWHLPIYNTIILLLSGTTVTWAHHALLHNDRKSMIQGLTLTVLLGAFFSCVQ 219 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +I+ +K Sbjct: 220 AYEYAH---APFEFKNSIYGATFFMATGFHGFHVLIGTIFLLVCLIRAIKGDFTPKQHFG 276 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 277 FEAAAWYWHFVDVVWLFLFFCIYIWG 302 >gi|270153137|gb|ACZ61149.1| cytochrome c oxidase subunit III [Capra hircus] Length = 260 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|261864009|gb|ACY01500.1| cytochrome c oxidase subunit III [Capra hircus] gi|270153123|gb|ACZ61136.1| cytochrome c oxidase subunit III [Capra hircus] gi|270153165|gb|ACZ61175.1| cytochrome c oxidase subunit III [Capra hircus] Length = 260 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIMLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|207559973|gb|ACI24568.1| cytochrome c oxidase subunit 3 [Oreamnos americanus] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F ++++ E+ Sbjct: 128 EVPLLNTSVLLTSGVSITWAHHSLMEGDRKH-MLQALFITIALGLYFTLLQVSEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|296531259|dbj|BAJ08105.1| cytochrome oxidase subunit 3 [Kinyongia fischeri] Length = 261 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G G +++ S+ L F FF T+ N P I+ + Sbjct: 66 TYQGHHTTKVQTGLRYGMILFITSEVLFFLGFFWTFYFSSTNPNPALGLQWPPKGIEPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + ++LL+S S K L T LL+T G F +++ E+ Sbjct: 126 PIEVPLLNTMILLASGMTLTWSHHSIMKGLKKNTSWSLLLTTLLGGYFTLLQALEYKD-- 183 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + + + FF G HGLHV G +L + +++ + + + + +W Sbjct: 184 -TKFSISDGTYGAIFFTATGFHGLHVMVGTSFLIICLMRQMHSHFTTKHYFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +++ +Y G Sbjct: 243 HFVDVVWLFLYTSIYWWG 260 >gi|577079|emb|CAA57788.1| coxIII [Helianthus annuus] Length = 272 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDI- 71 + + V G GF ++++S+ + F ++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGFILFIVSEVMFLFALFRASYHSSLAPTVEIGGIWPPKGIAVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T + L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPIPLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTAFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++ V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFSIVCGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|5921862|sp|O47701|COX3_ANTMR RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731910|gb|AAB93605.1| cytochrome oxidase subunit III [Antidorcas marsupialis] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITISLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|2731950|gb|AAB93625.1| cytochrome oxidase subunit III [Gazella gazella] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|4379165|emb|CAA24003.1| cytochrome oxidase III [Bos taurus] Length = 267 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAGAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|62288057|sp|P68299|COX3_GAZDO RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|62288058|sp|P68300|COX3_GAZSP RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731926|gb|AAB93613.1| cytochrome oxidase subunit III [Gazella spekei] gi|2731944|gb|AAB93622.1| cytochrome oxidase subunit III [Gazella dorcas] gi|2731946|gb|AAB93623.1| cytochrome oxidase subunit III [Gazella dorcas] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|55976795|sp|P68531|COX3_GAZBE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|55976796|sp|P68532|COX3_GAZGA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731936|gb|AAB93618.1| cytochrome oxidase subunit III [Gazella bennettii] gi|2731938|gb|AAB93619.1| cytochrome oxidase subunit III [Gazella bennettii] gi|2731948|gb|AAB93624.1| cytochrome oxidase subunit III [Gazella gazella] gi|2731952|gb|AAB93626.1| cytochrome oxidase subunit III [Gazella gazella] gi|2731954|gb|AAB93627.1| cytochrome oxidase subunit III [Gazella gazella] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|149189686|ref|ZP_01867968.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio shilonii AK1] gi|148836498|gb|EDL53453.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio shilonii AK1] Length = 199 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 96/190 (50%), Positives = 125/190 (65%), Gaps = 1/190 (0%) Query: 21 KESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIV 80 +S D GFWIYLMSDC++FA F TYAVL N G ++F++ +FV T++ Sbjct: 10 HDSHDHSDNKLFGFWIYLMSDCVLFATLFATYAVLASNPMTGSLARELFELPFVFVETML 69 Query: 81 LLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSA 140 LLLSS++ F M+A + + + W+ VT G+ FI ME+YEF HLI PQ +A Sbjct: 70 LLLSSITFGFGMIAMKRQDITN-LKLWMKVTFLLGLGFIGMEVYEFHHLIVEGYGPQTNA 128 Query: 141 FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICV 200 FLS+FF LVG HGLHV FGLIW+ V Q+ KKGL S R CLS+FWHFLD++WICV Sbjct: 129 FLSAFFTLVGTHGLHVTFGLIWMAVCYHQLSKKGLNSNMTMRFSCLSLFWHFLDIVWICV 188 Query: 201 FSFVYLMGVV 210 F+ VYL+GV+ Sbjct: 189 FTIVYLLGVM 198 >gi|5921873|sp|O47700|COX3_LITWA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731908|gb|AAB93604.1| cytochrome oxidase subunit III [Litocranius walleri] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|52220990|ref|YP_087088.1| cytochrome c oxidase subunit III [Bubalus bubalis] gi|51173188|gb|AAT97420.1| cytochrome c oxidase subunit III [Bubalus bubalis] Length = 260 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I+ + Sbjct: 68 QGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGINPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGSRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|16357395|ref|NP_443443.1| cytochrome c oxidase subunit III [Kareius bicoloratus] gi|190349419|ref|YP_001974598.1| cytochrome c oxidase subunit III [Platichthys stellatus] gi|16267334|dbj|BAB70449.1| cytochrome c oxidase subunit III [Kareius bicoloratus] gi|125657051|gb|ABN48618.1| cytochrome oxidase subunit 3 [Platichthys stellatus] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPDLGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIQSLALTILLGGYFTFLQGLEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLVGSSFLAVCLLRQILHHFTSDHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|207560001|gb|ACI24594.1| cytochrome c oxidase subunit 3 [Pseudois nayaur] Length = 261 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|194367565|ref|YP_002030175.1| cytochrome o ubiquinol oxidase subunit III [Stenotrophomonas maltophilia R551-3] gi|194350369|gb|ACF53492.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas maltophilia R551-3] Length = 211 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 89/178 (50%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 G W+YLMSD ++F F +YAVL YA GP D+F + + T +LL+SS++ A Sbjct: 34 FGMWVYLMSDLVLFGSLFASYAVLSTAYAGGPTGKDLFSLPFVMAETFLLLVSSITYGQA 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +LA + WL VT G FI MEIYEF+HLI A P SA+LS+FFALV Sbjct: 94 VLAMHRHDTS-AVLRWLGVTFVLGASFIGMEIYEFSHLIHEGAGPSTSAYLSAFFALVAT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 HGLHV GLIW+ V++ Q+ +GL N R+ CLS+FWHFLDL+WICVF+FVYL+G Sbjct: 153 HGLHVASGLIWMAVVMHQVYSRGLTPTNITRVSCLSLFWHFLDLVWICVFTFVYLIGA 210 >gi|194033212|ref|YP_002000549.1| cytochrome c oxidase subunit 3 [Oryza sativa Japonica Group] gi|60498734|dbj|BAC19853.2| Cytochrome c oxidase subunit 3 [Oryza sativa Japonica Group] Length = 280 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 86 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 145 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 146 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 201 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 202 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 261 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ F +Y G + Sbjct: 262 FVDVVWLFPFVSIYWWGGI 280 >gi|1942988|pdb|1OCC|C Chain C, Structure Of Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|1943001|pdb|1OCC|P Chain P, Structure Of Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|4389081|pdb|2OCC|C Chain C, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|4389094|pdb|2OCC|P Chain P, Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State gi|5822140|pdb|1OCO|C Chain C, Bovine Heart Cytochrome C Oxidase In Carbon Monoxide-Bound State gi|5822153|pdb|1OCO|P Chain P, Bovine Heart Cytochrome C Oxidase In Carbon Monoxide-Bound State gi|5822166|pdb|1OCR|C Chain C, Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|5822179|pdb|1OCR|P Chain P, Bovine Heart Cytochrome C Oxidase In The Fully Reduced State gi|5822192|pdb|1OCZ|C Chain C, Bovine Heart Cytochrome C Oxidase In Azide-Bound State gi|5822205|pdb|1OCZ|P Chain P, Bovine Heart Cytochrome C Oxidase In Azide-Bound State Length = 261 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAGAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|207559889|gb|ACI24490.1| cytochrome c oxidase subunit 3 [Capra sibirica] Length = 261 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTLAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAATWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|308070784|ref|YP_003872389.1| Quinol oxidase polypeptide III (Quinol oxidase aa3-600, subunit qoxC) [Paenibacillus polymyxa E681] gi|305860063|gb|ADM71851.1| Quinol oxidase polypeptide III (Quinol oxidase aa3-600, subunit qoxC) [Paenibacillus polymyxa E681] Length = 202 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 78/184 (42%), Positives = 118/184 (64%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 + LGFWI+L++D ++F+ F T+ VL N A GP ++F+++G+ + T +LL SS Sbjct: 20 QELKMLGFWIFLVTDVILFSTLFATFVVLRNNTAGGPGGAELFNMTGVIIETFLLLTSSF 79 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + A+LA + ++WL+VTA G+ FI E+YEF L+ A SAFLS+FF Sbjct: 80 TSGLAVLAMNKGSMK-GLINWLIVTAILGLGFIGFEVYEFVELVHEGANYGTSAFLSAFF 138 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 LVG HGLHV GL+W+ L+ Q+ K+GL + ++ LS++WHFLD +WI + + VYL Sbjct: 139 TLVGTHGLHVSLGLVWMIGLMFQLKKRGLTPETKGKVSALSLYWHFLDAVWIFLLTVVYL 198 Query: 207 MGVV 210 MGV+ Sbjct: 199 MGVM 202 >gi|284177706|ref|YP_003406709.1| cytochrome c oxidase subunit III [Naemorhedus caudatus] gi|213990208|gb|ACJ60512.1| cytochrome c oxidase subunit III [Naemorhedus caudatus] Length = 260 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + G P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSGLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|2707239|gb|AAB92234.1| cytochrome oxidase subunit III [Tragelaphus buxtoni] Length = 261 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|207559987|gb|ACI24581.1| cytochrome c oxidase subunit 3 [Ovibos moschatus] Length = 261 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIMLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|260778347|ref|ZP_05887240.1| cytochrome O ubiquinol oxidase subunit III [Vibrio coralliilyticus ATCC BAA-450] gi|260606360|gb|EEX32645.1| cytochrome O ubiquinol oxidase subunit III [Vibrio coralliilyticus ATCC BAA-450] Length = 198 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 96/193 (49%), Positives = 122/193 (63%), Gaps = 2/193 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLMSDC++FA F TYAVL +GP D+F++ +FV Sbjct: 8 HDHDHHDTSGNKL-FGFWVYLMSDCVLFATLFATYAVLESGSISGPTGKDIFELPFVFVE 66 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T++LL SS++ F M+A K + WL VT G+ FI ME+YEF HLI+ PQ Sbjct: 67 TMLLLFSSITFGFGMIAMKRKD-VAGLKRWLQVTFLLGLGFIGMEVYEFHHLIAEGYGPQ 125 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 SAFLS+FF LVG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++W Sbjct: 126 ASAFLSAFFTLVGTHGLHVTFGLIWLAVCYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVW 185 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYL+GV+ Sbjct: 186 ICVFTIVYLLGVM 198 >gi|154760703|ref|YP_001425504.1| cytochrome c oxidase subunit III [Osteolaemus tetraspis] gi|154425190|emb|CAM35765.1| cytochrome oxidase subunit III [Osteolaemus tetraspis] Length = 261 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 9/195 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDISG 73 + G G +++ S+ L F FF + + P I D Sbjct: 69 GHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLSPTPELGGQWPPTGITTLDPFE 128 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + + +LL+S S K + L++T G+ F ++ E+ Sbjct: 129 VPLLNTAVLLASGVTVTWAHHSLMKADRKSAIHALMLTIILGLYFTALQAMEY---YEAP 185 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 S++ S+FF G HGLHV G +L + + + S + + +WHF+ Sbjct: 186 FTIADSSYGSTFFVATGFHGLHVIIGSTFLTACLYRQIMYHFTSNHHFGFEAAAWYWHFV 245 Query: 194 DLIWICVFSFVYLMG 208 D++W+ ++ +Y G Sbjct: 246 DVVWLFLYISIYWWG 260 >gi|298110824|gb|ADI57781.1| cytochrome c oxidase subunit III [Ovis ammon] Length = 261 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|212639692|ref|YP_002316212.1| cytochrome caa3 oxidase subunit III [Anoxybacillus flavithermus WK1] gi|212561172|gb|ACJ34227.1| Cytochrome caa3 oxidase (subunit III) [Anoxybacillus flavithermus WK1] Length = 206 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ +LGFW +L + ++FA F T+ L + A GP ++F + +F++T Sbjct: 15 EPEKATLEGKNKFLGFWFFLGGETVLFASLFATFLALRDSVANGPTAEELFKMPIVFLAT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM K WL +T G F+ +EIYEF + Sbjct: 75 MLLLTSSLTSVYAMHHMRNFDFK-KMQLWLGITVLLGAGFLALEIYEFTEYVHEGFKFST 133 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF SSF+ LVG HG HV FGL+W+ L+++ K+GL N + S++WHF+D++W+ Sbjct: 134 SAFSSSFYTLVGTHGGHVAFGLLWIITLMVRNAKRGLNLYNAPKFYVASLYWHFIDVVWV 193 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 194 FIFTVVYLMGMV 205 >gi|157778684|gb|ABV70822.1| cytochrome c oxidase subunit III [Bos taurus] gi|157778698|gb|ABV70835.1| cytochrome c oxidase subunit III [Bos taurus] Length = 260 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G +++ S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|2707241|gb|AAB92235.1| cytochrome oxidase subunit III [Tragelaphus eurycerus] Length = 261 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGHRNHVLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVTTGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|291612323|ref|YP_003540753.1| cytochrome c oxidase subunit III [Pseudoleptodeira latifasciata] gi|189164379|gb|ACD77322.1| cytochrome c oxidase subunit III [Pseudoleptodeira latifasciata] Length = 261 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPVGITPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + + L++T G+ F +++ E+ Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEAIYTLMITILLGVYFTALQMSEYQ--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVLIGTSFLLVCMLRLMQNHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|27543912|dbj|BAC54741.1| Cytochrome c oxidase polypeptide III [Bos taurus] gi|27543926|dbj|BAC54754.1| Cytochrome c oxidase polypeptide III [Bos taurus] gi|27543940|dbj|BAC54767.1| cytochrome c oxidase polypeptide III [Bos taurus] gi|27543954|dbj|BAC54780.1| cytochrome c oxidase polypeptide III [Bos taurus] gi|27543968|dbj|BAC54793.1| cytochrome c oxidase polypeptide III [Bos taurus] gi|27543982|dbj|BAC54806.1| cytochrome c oxidase polypeptide III [Bos taurus] gi|27543996|dbj|BAC54819.1| cytochrome c oxidase polypeptide III [Bos taurus] Length = 260 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAGAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|207559791|gb|ACI24399.1| cytochrome c oxidase subunit 3 [Ammotragus lervia] Length = 261 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|215399133|ref|YP_002332264.1| cytochrome c oxidase subunit III [Phoenicolacerta kulzeri] gi|213983281|gb|ACJ54965.1| cytochrome c oxidase subunit III [Phoenicolacerta kulzeri] Length = 261 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPID 67 + G G +++ S+ L F FF + + G P++ Sbjct: 66 TYQGHHTMPVQKGLRYGMILFITSEVLFFMGFFWAFYHSSLAPTPELGGQWPPNGIQPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 F++ ++T VLL S ++ ++A A + + L +T G+ F +++ E+ Sbjct: 126 AFEVP--LLNTAVLLASGVTVTWAHHALMEGKRKD-MIQALTMTITLGLYFTLLQASEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 S + ++FF G HGLHV G +L + +I+ + + + + Sbjct: 182 --YETPFTIADSVYGTTFFVATGFHGLHVIIGSTFLLICLIRQMFYHFTTNHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|5921888|sp|O47687|COX3_TRASR RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2707247|gb|AAB92238.1| cytochrome oxidase subunit III [Tragelaphus scriptus] Length = 261 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|207560029|gb|ACI24620.1| cytochrome c oxidase subunit 3 [Rupicapra rupicapra] Length = 261 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + K S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQXKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|221198371|ref|ZP_03571417.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2M] gi|221208952|ref|ZP_03581949.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2] gi|221215751|ref|ZP_03588711.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD1] gi|221164363|gb|EED96849.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD1] gi|221171235|gb|EEE03685.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2] gi|221182303|gb|EEE14704.1| ubiquinol oxidase, subunit III [Burkholderia multivorans CGD2M] Length = 202 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 130/195 (66%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G+ + Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPGVAIE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ + WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLGWLAVTFVLGAAFLAMELREFSHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVARGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+FVYL V+ Sbjct: 188 VWICVFTFVYLASVI 202 >gi|73538404|ref|YP_298771.1| cytochrome O ubiquinol oxidase subunit III [Ralstonia eutropha JMP134] gi|72121741|gb|AAZ63927.1| cyoC2, RSc1860; probable transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase protein [Ralstonia eutropha JMP134] Length = 220 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 99/197 (50%), Positives = 126/197 (63%), Gaps = 7/197 (3%) Query: 17 VKDKKESCVDHD------GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFD 70 V + +HD T LGFW+YLMSDCL+FAV F TY VLG + A GPA ++FD Sbjct: 20 VHHAAHTGAEHDAHASEGHTTLGFWLYLMSDCLIFAVLFATYGVLGNHTAGGPAGRELFD 79 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHK-TVSWLLVTAFFGMIFIIMEIYEFAHL 129 + + V T++LL SS + AM++ R + + WL +T G FI MEIYEF L Sbjct: 80 LRFVLVETMLLLCSSYTFGMAMMSIKNGRGEVRDVIRWLAITFMLGACFIGMEIYEFREL 139 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + A PQRSA LS+FF LVG HG+HV GL W+ VL Q+ GL + +RRL CLS+F Sbjct: 140 LHEGAGPQRSAALSAFFMLVGTHGMHVAAGLAWIVVLAHQMQAFGLDAIVRRRLACLSLF 199 Query: 190 WHFLDLIWICVFSFVYL 206 WHFLDL+WICVF+FVYL Sbjct: 200 WHFLDLVWICVFTFVYL 216 >gi|57282267|emb|CAD32362.1| cytochrome oxidase subunit 3 [Eustrephus latifolius] Length = 265 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G GF ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGFILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|32526849|ref|NP_871754.1| cytochrome c oxidase subunit III [Hemiechinus auritus] gi|32469158|dbj|BAC78854.1| cytochrome oxidase subunit 3 [Hemiechinus auritus] Length = 261 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDIS 72 + + G G ++++S+ L F FF + PA + + Sbjct: 68 QGHHTPIVQKGLRYGMVLFIISEVLFFTGFFWAFYHSSLVPTTELGGYWPPAGVKPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S ++ + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTAVLLASGVSVTWAHHSILEKNRISAIQALTITISLGLYFTLLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S+FF G HGLHV G +L V +++ LK S + + +WHF Sbjct: 185 PFTIADSIYGSTFFMATGFHGLHVIIGSSFLIVCLMRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|218288764|ref|ZP_03493027.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius LAA1] gi|218241122|gb|EED08298.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius LAA1] Length = 211 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 120/210 (57%), Gaps = 7/210 (3%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 M G + +L Y + + + LGFWI+L +D ++F F TY VL + Sbjct: 8 MEDTGGGGARALALEYTHAEDRTRI------LGFWIFLATDMILFGCLFATYLVLRTHTD 61 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP P +FD+ G T+ LL SS + A L+ R W+ VT G+ F+ Sbjct: 62 GGPTPATLFDMKGFGAETLALLTSSFTGGLATLSMRDGRQKS-VAFWMSVTIVLGLTFLS 120 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 +E EFAH + AV QRSAFLSSFF LVG HG HV FG++W+ V + Q+L++GL Sbjct: 121 IEASEFAHDAFIGAVWQRSAFLSSFFTLVGTHGCHVTFGVLWMLVTLYQVLRRGLTPRTA 180 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 R++ ++++WHFLD++WI +F+ VYL G+V Sbjct: 181 RKVFVVNLYWHFLDVVWIFIFTVVYLTGMV 210 >gi|25057587|ref|NP_739769.1| cytochrome c oxidase subunit III [Caulophryne pelagica] gi|25005684|dbj|BAC23339.1| cytochrome c oxidase subunit III [Caulophryne jordani] Length = 261 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 15/196 (7%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVFDIS 72 + G G +++ S+ L FA FF + +G +D F++ Sbjct: 71 HTPPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPELGGCWPPSGVTALDPFEVP 130 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 ++T VLL S ++ ++A + + + LL+T G F +++ E+ Sbjct: 131 --LLNTAVLLASGVTVTWAHHSIMAGQRRQA-IHSLLLTVLLGFYFTLLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G ++L + +++ ++ SG+ + +WHF Sbjct: 185 PFTIADGVYGSTFFIATGFHGLHVIIGTLFLAICLLRQIQHHFTSGHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|218678939|ref|ZP_03526836.1| Cytochrome-c oxidase [Rhizobium etli CIAT 894] Length = 219 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y +L Sbjct: 8 AHEGAHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLYPNEAIQAARLLYTGGTWP 67 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S + + + L++T G++F ++ Sbjct: 68 PKGIEVLDPWHLPIYNTVILLLSGTTVTWAHHALLHNDRKGLIQGLVLTVLLGVLFSCVQ 127 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+AH + S + ++FF G HG HV G I+L V +I+ L+ Sbjct: 128 AYEYAH---APFAFKNSIYGATFFMATGFHGFHVLVGTIFLLVCLIRALRGDFTPKQHFG 184 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 185 FEAAAWYWHFVDVVWLFLFFCIYVWG 210 >gi|2731942|gb|AAB93621.1| cytochrome oxidase subunit III [Gazella dorcas] Length = 261 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPNVQKGLRYGMILFIISEILFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|1169063|sp|P08745|COX3_OENBE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III Length = 265 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + V G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKVVQLGLRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +LL S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLAIVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+F+ G HG HV G ++ + I+ L + + +WH Sbjct: 187 APPTISDSIYGSTFYLATGFHGFHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|288908834|dbj|BAI77085.1| cytochrome c oxidase subunit III [Caulophryne pelagica] Length = 261 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 15/196 (7%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVFDIS 72 + G G +++ S+ L FA FF + +G +D F++ Sbjct: 71 HTPPVQKGLRYGMILFITSEVLFFAGFFWAFYHSSLAPTPELGGCWPPSGVTALDPFEVP 130 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 ++T VLL S ++ ++A + + + LL+T G F +++ E+ Sbjct: 131 --LLNTAVLLASGVTVTWAHHSIMAGQRRQA-IHSLLLTVLLGFYFTLLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G ++L + +++ ++ SG+ + +WHF Sbjct: 185 PFTIADGVYGSTFFIATGFHGLHVIIGTLFLAICLLRQVQHHFTSGHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|57282239|emb|CAD32348.1| cytochrome oxidase subunit 3 [Rhodohypoxis milloides] Length = 265 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G GF ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGLRYGFLLFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|157736208|ref|YP_001491350.1| cytochrome c oxidase subunit III [Triacanthodes anomalus] gi|139000706|dbj|BAF51874.1| cytochrome c oxidase subunit III [Triacanthodes anomalus] Length = 261 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ L F FF + P I D Sbjct: 68 QGHHTPPVQKGLRFGMILFITSEVLFFVGFFWAFYHSSLAPTPELGGCWPPTGITTLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLFLTILLGFYFTFLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V +++ ++ S + + +WHF Sbjct: 185 PFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQIQYHFTSEHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|114327938|ref|YP_745095.1| cytochrome O ubiquinol oxidase subunit III [Granulibacter bethesdensis CGDNIH1] gi|114316112|gb|ABI62172.1| cytochrome O ubiquinol oxidase subunit III [Granulibacter bethesdensis CGDNIH1] Length = 207 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 96/193 (49%), Positives = 130/193 (67%), Gaps = 3/193 (1%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTI 79 + +H T GFW+YLM+DC++F+ F +AV +A GP ++FD+ + + T Sbjct: 16 EHAHHDEHGKTVFGFWLYLMTDCILFSGLFAAFAVARSQFAGGPTGQEIFDLKDVAIETA 75 Query: 80 VLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRS 139 +LL SS++ FAML + + T+ WL VT FG+ F++ME+ EF+HLI+ A P RS Sbjct: 76 LLLFSSITYGFAMLQAHK-HRLGGTLQWLGVTFLFGLGFLLMEVKEFSHLIAEGAGPDRS 134 Query: 140 AFLSSFFALVGLHGLHVFFGLIWLFVLVIQ--ILKKGLISGNQRRLICLSMFWHFLDLIW 197 AFLS+FF LVG HGLHV GL+W+ VLV Q +LKKGL RL CLS+FWHFLD++W Sbjct: 135 AFLSAFFTLVGTHGLHVTCGLLWMAVLVFQLGVLKKGLTPAYMSRLTCLSLFWHFLDIVW 194 Query: 198 ICVFSFVYLMGVV 210 ICVFSFVYL GV+ Sbjct: 195 ICVFSFVYLAGVL 207 >gi|94676901|ref|YP_588719.1| cytochrome o ubiquinol oxidase, subunit III [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220051|gb|ABF14210.1| cytochrome o ubiquinol oxidase, subunit III [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 203 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWIYLMSDC++FA+ F TY VL + A GP+ ++F++ + T LLLSSL+ A Sbjct: 26 LGFWIYLMSDCILFAMLFATYVVLSHSIAGGPSGKEIFELPAVQFETFCLLLSSLTYGIA 85 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +LA ++ + + WL T G+ FII+EI EF +LI P RSAFLS FF+LV Sbjct: 86 ILA-MYRKQNNSVILWLFCTFILGLGFIIVEIMEFYNLIINGFGPNRSAFLSGFFSLVAT 144 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV GLIW+ V+++ + KKGL NQ RL CLS+FWHFLD+IWICVF+ VYL+GV+ Sbjct: 145 HGCHVISGLIWIMVMIVHVYKKGLTLDNQIRLQCLSLFWHFLDIIWICVFTVVYLLGVL 203 >gi|70987657|gb|AAZ16695.1| cytochrome c oxidase subunit III [Bos taurus] Length = 260 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAATWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|207559875|gb|ACI24477.1| cytochrome c oxidase subunit 3 [Capra pyrenaica] Length = 261 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRSHMLQALFITITLGLYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYMSIYWWG 260 >gi|288903485|ref|YP_003434201.1| cytochrome c oxidase subunit III [Cervus elaphus xanthopygus] gi|288903535|ref|YP_003434289.1| cytochrome c oxidase subunit III [Cervus elaphus yarkandensis] gi|312233472|ref|YP_004021871.1| cytochrome c oxidase subunit III [Cervus elaphus songaricus] gi|285013437|gb|ADC32715.1| cytochrome c oxidase subunit III [Cervus elaphus xanthopygus] gi|285013451|gb|ADC32728.1| cytochrome c oxidase subunit III [Cervus elaphus yarkandensis] gi|309399287|gb|ADO78920.1| cytochrome c oxidase subunit III [Cervus elaphus songaricus] Length = 261 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|77020045|ref|YP_337830.1| cytochrome c oxidase subunit III [Pantholops hodgsonii] gi|74419060|gb|ABA03260.1| cytochrome c oxidase subunit 3 [Pantholops hodgsonii] Length = 261 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRIPMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|294679508|gb|ADF29551.1| cytochrome c oxidase subunit III [Pseudorca crassidens] gi|325511661|gb|ADZ22993.1| cytochrome c oxidase subunit III [Pseudorca crassidens] gi|325511675|gb|ADZ23006.1| cytochrome c oxidase subunit III [Pseudorca crassidens] Length = 261 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITIVLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFMATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|68989235|ref|YP_254706.1| cytochrome c oxidase subunit III [Cervus nippon yakushimae] gi|67625642|dbj|BAD99593.1| Cytochrome c oxidase subunit3 [Cervus nippon yakushimae] Length = 261 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|299829096|ref|YP_003735111.1| cytochrome c oxidase subunit III [Hydrolagus lemures] gi|298110908|gb|ADI57859.1| cytochrome c oxidase subunit III [Hydrolagus lemures] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + G G +++ S+ L F FF + G P+D F Sbjct: 68 QGHHTPPVQKGMRWGMILFITSEVLFFLGFFWAFYHSSLAPTPELGNCWPPTGIHPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T +LL S ++ ++A + + L +T G+ F +++ E+ Sbjct: 128 NVP--LLNTAILLASGVTITWAHHSLMEGT-RKEMTQALTLTVILGVYFTLLQAMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V +++ ++ S + + + Sbjct: 182 YEAPFTISDGIYGSTFFVATGFHGLHVIIGTTFLLVCLMRQIQYHFTSMHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|145315421|gb|ABP62982.1| cytochrome c oxidase subunit III [Osteolaemus tetraspis] Length = 262 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 9/195 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDISG 73 + G G +++ S+ L F FF + + P I D Sbjct: 70 GHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLSPTPELGGQWPPTGITTLDPFE 129 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + + +LL+S S K + L++T G+ F ++ E+ Sbjct: 130 VPLLNTAVLLASGVTVTWAHHSLMKADRKSAIHALMLTIILGLYFTALQAMEY---YEAP 186 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 S++ S+FF G HGLHV G +L + + + S + + +WHF+ Sbjct: 187 FTIADSSYGSTFFVATGFHGLHVIIGSTFLTACLYRQIMYHFTSNHHFGFEAAAWYWHFV 246 Query: 194 DLIWICVFSFVYLMG 208 D++W+ ++ +Y G Sbjct: 247 DVVWLFLYISIYWWG 261 >gi|300508208|dbj|BAJ10943.1| cytochrome c oxidase subunit 3 [Rana holsti] Length = 246 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYA----AGPAPIDVFDIS 72 + G G +++ S+ F FF Y A L PA I F+ Sbjct: 53 QGHHTPPVQTGLRYGMILFITSEVFFFIGFFWAYYNASLAPTPEVGECWPPAGITPFNPF 112 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 I + +LL+S S + + L +T G+ F +++ E+ Sbjct: 113 EIPLLNTAVLLASGVSVTWAHHSIMQADRKGALQALAITITLGLYFTLLQAMEY---YEA 169 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + ++FF G HGLHV G +L + ++ L S + + +WHF Sbjct: 170 PFTIADGIYGTTFFVATGFHGLHVIIGSAFLIMCFLRQLYFHFTSQHHFGFEAAAWYWHF 229 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 230 VDVVWLFLYVSIYWWG 245 >gi|5921886|sp|O47686|COX3_TRAOR RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2707245|gb|AAB92237.1| cytochrome oxidase subunit III [Tragelaphus oryx] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + V G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGHRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|13172|emb|CAA28459.1| unnamed protein product [Oenothera berteroana] Length = 265 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDIS 72 + + V G G ++++S+ + FF +++ L G P I V D Sbjct: 71 EGHHTKVVQLGLRYGSILFIVSEVMFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +LL S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLAIVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+F+ G HG HV G ++ + I+ L + + +WH Sbjct: 187 APPTISDSIYGSTFYLATGFHGFHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|332886937|dbj|BAK23049.1| cytochrome c oxidase subunit III [Luciosoma bleekeri] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G +++ S+ L F FF + PA + D Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGCWPPAGVTTLDPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + ++ + L +T G+ F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWAHHSIMEGK-RNQAIQSLTLTILLGLYFTALQAMEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V +++ + S + + +WH Sbjct: 184 APFTVADGVYGSTFFVATGFHGLHVIIGSTFLAVCLMRQVLHHFTSEHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|325914850|ref|ZP_08177185.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas vesicatoria ATCC 35937] gi|325538941|gb|EGD10602.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas vesicatoria ATCC 35937] Length = 210 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 126/182 (69%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL+SSLS Sbjct: 30 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLISSLSF 89 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 90 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTL 148 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 149 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 208 Query: 209 VV 210 + Sbjct: 209 AL 210 >gi|207559903|gb|ACI24503.1| cytochrome c oxidase subunit 3 [Damaliscus pygargus] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNPMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|148559948|ref|YP_001258490.1| cytochrome c oxidase subunit III [Brucella ovis ATCC 25840] gi|148371205|gb|ABQ61184.1| cytochrome c oxidase, subunit III [Brucella ovis ATCC 25840] Length = 439 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 19/206 (9%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMF---------AVFFV--TYAVLGKNY---AAGP 63 + + V G +++ S+ + F A F + V + P Sbjct: 82 HEGHHTRVVSLHLRYGMIMFIASEVMFFVAWFWAFFDASLFPNEVHQVARAEFTGGVWPP 141 Query: 64 APIDVFDI-SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 I+V D +T++LLLS + ++A A ++ L +T G++F ++ Sbjct: 142 KGIEVLDPLHLPLYNTVILLLSGTTLTWAHHALL-HNDRKGMITGLAITVALGVLFSCVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+ I + S + ++FF G HG HV G I+L V + + + Sbjct: 201 AYEY---IHAPFAFKDSIYGATFFMATGFHGFHVLIGTIFLLVCLFRAIGGDFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFAIYVWG 283 >gi|325511689|gb|ADZ23019.1| cytochrome c oxidase subunit III [Peponocephala electra] gi|325511703|gb|ADZ23032.1| cytochrome c oxidase subunit III [Peponocephala electra] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|86264084|gb|ABC87778.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|158187284|gb|ABW22899.1| cytochrome c oxidase subunit 3 [Ovis aries] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I D Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLDPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|255506403|ref|YP_003097157.1| cytochrome c oxidase subunit III [Budorcas taxicolor] gi|197107931|gb|ACH42508.1| cytochrome c oxidase subunit 3 [Budorcas taxicolor] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKSLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGSCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|148543108|ref|YP_001260505.1| cytochrome c oxidase subunit III [Ammotragus lervia] gi|126742202|gb|ABO27121.1| cytochrome c oxidase subunit 3 [Ammotragus lervia] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRNHMLQALFITIALGIYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|114770414|ref|ZP_01447952.1| Cytochrome c oxidase, aa3-type, subunit III [alpha proteobacterium HTCC2255] gi|114549251|gb|EAU52134.1| Cytochrome c oxidase, aa3-type, subunit III [alpha proteobacterium HTCC2255] Length = 280 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA----------VLGKNYAAGP 63 +F + + V G G +++MS+ + F +F ++ + P Sbjct: 77 VFDSEAGDHTPVVVIGLRYGVIMFIMSEVMFFVAWFWSFFKNAMYPMGPMSPAVDGVWPP 136 Query: 64 APIDVFDIS-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 I+ FD ++T++LL S ++A A A V L+ G IF + + Sbjct: 137 VGIETFDPWHLPLINTLILLCSGCFATWAHHALAHDNDRKGLVWGLVGAIVLGAIFTVFQ 196 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 +YE+ H + + + ++FF G HG HV G I+L V +++ LK Sbjct: 197 VYEYGH---AAFSFRDNVYGANFFMATGFHGFHVVVGTIFLAVCLLRALKGHFTQERHVG 253 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F+ VY+ G Sbjct: 254 FEAAAWYWHFVDVVWLFLFAAVYIWG 279 >gi|62736200|ref|YP_227588.1| cytochrome c oxidase subunit III [Cervus nippon yesoensis] gi|30314643|dbj|BAC76079.1| cytochrome c oxidase subunit 3 [Cervus nippon yesoensis] gi|62241300|dbj|BAD93676.1| cytochrome c oxidase subunit 3 [Cervus nippon yesoensis] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPTVQKSLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|148922593|ref|YP_001293625.1| cytochrome c oxidase subunit III [Mammut americanum] gi|148540935|gb|ABQ86185.1| cytochrome c oxidase subunit III [Mammut americanum] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDIS 72 + + G G ++++S+ L F FF + A P I + Sbjct: 68 QGHHTPIVQKGLRYGMILFIVSEVLFFTGFFWAFYHSSLAPAPELGSYWPPVGIYPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + LL+T G F +++I+E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKNMLQALLITILLGAYFTLLQIFEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L + I+ L+ S + + +WHF Sbjct: 185 SFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLICFIRQLEFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYLSIYWWG 260 >gi|161524384|ref|YP_001579396.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia multivorans ATCC 17616] gi|189350861|ref|YP_001946489.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia multivorans ATCC 17616] gi|160341813|gb|ABX14899.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia multivorans ATCC 17616] gi|189334883|dbj|BAG43953.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia multivorans ATCC 17616] Length = 202 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 131/195 (67%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G+ + Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPGVAIE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLAWLAVTFVLGAAFLAMELREFSHLIAGGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVARGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVF+FVYL V+ Sbjct: 188 VWICVFTFVYLASVI 202 >gi|307941662|ref|ZP_07657017.1| cytoChrome c oxidase subunit 3 [Roseibium sp. TrichSKD4] gi|307775270|gb|EFO34476.1| cytoChrome c oxidase subunit 3 [Roseibium sp. TrichSKD4] Length = 288 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 78/206 (37%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAG 62 + + V G +++ S+ + F +F Y V Sbjct: 85 AHEGHHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFAGEAINYARVEATGGQWP 144 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+ FD + + ++LL S + + L+ T G++F I + Sbjct: 145 PVGIETFDPWHLPLLNTLILLLSGTTVTWAHHALLHDDREGLKWGLIFTVILGILFSICQ 204 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 YE+ H + + ++F+ G HG HV G I+L V + + L Sbjct: 205 AYEYGH---AAFDFSGNIYGATFYMATGFHGFHVIVGTIFLAVCLFRALAGHFTPKQHFG 261 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 262 FEAAAWYWHFVDVVWLFLFVAIYIWG 287 >gi|291612365|ref|YP_003540792.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha klauberi] gi|189164421|gb|ACD77361.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha klauberi] Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIVLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLAVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|88766333|ref|YP_398760.2| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|93204564|sp|Q38PR6|COX3_MAMPR RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III Length = 261 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V +G G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|207559819|gb|ACI24425.1| cytochrome c oxidase subunit 3 [Budorcas taxicolor] Length = 261 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKSLRYGMILFIVSEVLFFTGFFWAFYHSSLAPTPELGSCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITITLGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V ++ LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|86264082|gb|ABC87777.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|126565915|gb|ABO20826.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|126565917|gb|ABO20827.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|126565921|gb|ABO20829.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|151573890|gb|ABS18249.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573892|gb|ABS18250.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573894|gb|ABS18251.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573896|gb|ABS18252.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573898|gb|ABS18253.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573900|gb|ABS18254.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573902|gb|ABS18255.1| cytochrome oxidase subunit 3 [Ovis aries] gi|151573904|gb|ABS18256.1| cytochrome oxidase subunit 3 [Ovis aries] gi|158187242|gb|ABW22860.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|158187256|gb|ABW22873.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|158187270|gb|ABW22886.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|158187298|gb|ABW22912.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|158187312|gb|ABW22925.1| cytochrome c oxidase subunit 3 [Ovis aries] gi|298110628|gb|ADI57599.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110642|gb|ADI57612.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110656|gb|ADI57625.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110670|gb|ADI57638.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110684|gb|ADI57651.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110698|gb|ADI57664.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110712|gb|ADI57677.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110726|gb|ADI57690.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110768|gb|ADI57729.1| cytochrome c oxidase subunit III [Ovis aries musimon] gi|298110782|gb|ADI57742.1| cytochrome c oxidase subunit III [Ovis aries musimon] gi|298110796|gb|ADI57755.1| cytochrome c oxidase subunit III [Ovis vignei] gi|298110810|gb|ADI57768.1| cytochrome c oxidase subunit III [Ovis vignei] gi|298110838|gb|ADI57794.1| cytochrome c oxidase subunit III [Ovis vignei] Length = 261 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|83415383|gb|ABC17884.1| cytochrome c oxidase subunit III [Mammuthus primigenius] Length = 261 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V +G G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|170743801|ref|YP_001772456.1| cytochrome o ubiquinol oxidase subunit III [Methylobacterium sp. 4-46] gi|168198075|gb|ACA20022.1| cytochrome o ubiquinol oxidase, subunit III [Methylobacterium sp. 4-46] Length = 208 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 1/203 (0%) Query: 8 KSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPID 67 P + + +E GT LGFW+YLM DCL+FAV F T+ VLG+NYAAGP+ D Sbjct: 6 APPGATAPVFYETEEHAHGDGGTLLGFWVYLMGDCLIFAVLFATFGVLGRNYAAGPSGAD 65 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 +FD+ + ++T +LLLSS++ FAML K + T WL++T FG F+++E+YEF Sbjct: 66 LFDLRLVALNTSLLLLSSITYGFAMLE-MDKDRLDMTRRWLIITGLFGAGFLMIELYEFG 124 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 HLI A PQRSAFLS+FF LVG HGLHV FG++WL L+ Q+ + GL++ +R L+CLS Sbjct: 125 HLIHEGATPQRSAFLSAFFTLVGTHGLHVTFGIVWLLTLLAQLRRYGLVAETRRGLLCLS 184 Query: 188 MFWHFLDLIWICVFSFVYLMGVV 210 MFWHFLD++WI VF+FVYLMG + Sbjct: 185 MFWHFLDVVWIGVFTFVYLMGAM 207 >gi|189164509|gb|ACD77442.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha klauberi] Length = 261 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIVLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLTVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|291612309|ref|YP_003540740.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha ochrorhyncha] gi|189164365|gb|ACD77309.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha ochrorhyncha] Length = 261 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIVLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLTVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|254419944|ref|ZP_05033668.1| cytochrome o ubiquinol oxidase, subunit III [Brevundimonas sp. BAL3] gi|196186121|gb|EDX81097.1| cytochrome o ubiquinol oxidase, subunit III [Brevundimonas sp. BAL3] Length = 207 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 T LGFW+YLMSDCL+FA+ F + VLG NYAAGP P ++FD+ + V+T +LL SS+ Sbjct: 24 GSSTMLGFWLYLMSDCLIFAMLFAVFGVLGGNYAAGPGPKELFDLELVAVNTAMLLFSSI 83 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + FAMLA K +T+ WL +T FG+ F+ +E+YEFAHLI A PQRSAFLS+FF Sbjct: 84 TYGFAMLA-MDKNNRTQTLIWLAITGLFGLAFLGIELYEFAHLIHEGATPQRSAFLSAFF 142 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 LVG HGLHV FG+IWL L++Q+ KGLI N+RRL+CLSMFWHFLD+IWI VF+FVYL Sbjct: 143 TLVGTHGLHVTFGIIWLVTLMVQVSWKGLIPANKRRLMCLSMFWHFLDVIWIGVFTFVYL 202 Query: 207 MGVV 210 +G+V Sbjct: 203 LGMV 206 >gi|2459615|gb|AAB71760.1| cytochrome c-oxidase subunit three [Ovis aries] Length = 267 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYMSIYWWG 260 >gi|164454833|dbj|BAF96958.1| cytochrome oxidase c subunit III [Mammuthus primigenius] Length = 262 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V +G G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|5921865|sp|O47694|COX3_DAMLU RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|2731896|gb|AAB93598.1| cytochrome oxidase subunit III [Damaliscus lunatus] Length = 261 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTSAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSTHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|254721544|ref|ZP_05183333.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A1055] Length = 207 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 105/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ + ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGENKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKKMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|319945342|ref|ZP_08019604.1| cytochrome o ubiquinol oxidase subunit III [Lautropia mirabilis ATCC 51599] gi|319741912|gb|EFV94337.1| cytochrome o ubiquinol oxidase subunit III [Lautropia mirabilis ATCC 51599] Length = 210 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 94/197 (47%), Positives = 136/197 (69%), Gaps = 4/197 (2%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 F++ + +GT LGFW++L+ D L+FA F YAVLG++YA G + D+FD+ Sbjct: 17 QFHLTEAHPPE---NGTMLGFWLFLIGDLLLFACLFAAYAVLGRSYATGFSGADIFDLKL 73 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + +ST +LL +S S ++A H T+ WL +T FG+ F+ +EI+ F H+I M Sbjct: 74 VALSTALLLCASFSGGHGVVAMQDSE-KHATLGWLALTGLFGLTFLGIEIHAFNHMIGMG 132 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 A PQRSAFLS+FFALVG+HGLHV FGL+WL L++Q+ + GLI N+RR+ CL++FWHFL Sbjct: 133 ATPQRSAFLSAFFALVGIHGLHVAFGLVWLITLLVQVGQHGLIPANRRRIRCLTLFWHFL 192 Query: 194 DLIWICVFSFVYLMGVV 210 D++W+ VFS VYL+G + Sbjct: 193 DVVWVAVFSLVYLIGSL 209 >gi|189164463|gb|ACD77400.1| cytochrome c oxidase subunit III [Hypsiglena chlorophaea chlorophaea] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLIVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|325292155|ref|YP_004278019.1| cytochrome c oxidase subunit III [Agrobacterium sp. H13-3] gi|325060008|gb|ADY63699.1| cytochrome c oxidase subunit III [Agrobacterium sp. H13-3] Length = 291 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--------------KNYAAG 62 + + V G +++ S+ + F +F Y Sbjct: 81 ANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLYPHEAIQASRLEYTGGQWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S +C + ++ L++T G++F ++ Sbjct: 141 PKGIEVIDPWHLPLYNTVILLLSGTCVTWAHHALLHNDRKGLITGLVLTVALGVLFSTVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 +YE+ H + S + ++FF G HG HVF G ++L V +++ + G Sbjct: 201 VYEYMH---APFDFKNSIYGATFFMATGFHGFHVFVGTVFLLVCLLRAIAGGFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFAIYIWG 283 >gi|325511633|gb|ADZ22967.1| cytochrome c oxidase subunit III [Feresa attenuata] gi|325511647|gb|ADZ22980.1| cytochrome c oxidase subunit III [Feresa attenuata] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|91176223|ref|YP_537164.1| cytochrome c oxidase subunit III [Verasper variegatus] gi|90287786|gb|ABD92806.1| cytochrome c oxidase subunit III [Verasper variegatus] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTLPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIQALALTILLGGYFTFLQALEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSSFLAVCLLRQILHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|416824|sp|P32808|COX3_HELAN RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|443843|emb|CAA40865.1| cytochrome-c oxidase [Helianthus annuus] Length = 265 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDI- 71 + + V G GF ++++S+ + F +++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGFILFIVSEVMFLFALFRASSHSSLAPTVEIGGIWPPKGIAVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T + L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPIPLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTAFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++ V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFSIVCGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|38707541|ref|NP_944743.1| cytochrome c oxidase subunit III [Lagenorhynchus albirostris] gi|38602564|emb|CAD88020.1| cytochrome c oxidase polypeptide III [Lagenorhynchus albirostris] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + ++ + S + L + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFVRQMMFHFTSNHHFGLEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|148262490|ref|YP_001229196.1| cytochrome c oxidase, subunit III [Geobacter uraniireducens Rf4] gi|146395990|gb|ABQ24623.1| cytochrome c oxidase, subunit III [Geobacter uraniireducens Rf4] Length = 196 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Query: 19 DKKESCVDH---DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDV-FDISGI 74 K + + LG W +L ++ L+F F Y VL + + Sbjct: 4 TKHTTEQQGAALETAKLGIWAFLATEVLLFGGLFTAYTVLRVGDPQMFHTEYLKLNRLFG 63 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T+VL+ SSL+ + + A + LL+T F+ ++ E+A + Sbjct: 64 AINTVVLITSSLTVALGIAAIREGKTGT-LKRCLLLTILLAAAFLGIKYAEYAEHFARGE 122 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 +P+ + F S ++ + GLH +HVF G+ L +++ + + + ++WHF+D Sbjct: 123 LPRTNNFFSLYYMMTGLHAIHVFAGMAALATMLVMAGRGKFSAEEHTPVEITGLYWHFVD 182 Query: 195 LIWICVFSFVYLMG 208 L+WI +F +YL+G Sbjct: 183 LVWIYLFPLLYLIG 196 >gi|224588091|ref|YP_002640616.1| cytochrome c oxidase subunit III [Viridovipera stejnegeri stejnegeri] gi|224037281|gb|ACN37852.1| cytochrome c oxidase subunit 3 [Viridovipera stejnegeri stejnegeri] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF T + P I+ + Sbjct: 66 TYQGHHTLGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K ++V L +T G F +++ E+ Sbjct: 126 PMDVPLLNTAVLLSSGATITWSHHTMMKGNKKESVYALTITIILGAYFTALQVSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLLVCLMRLIQSHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDVVWLFLYVSVYWWG 260 >gi|223471668|ref|YP_002587105.1| cytochrome c oxidase subunit III [Grampus griseus] gi|170027004|gb|ACB06055.1| cytochrome c oxidase subunit III [Grampus griseus] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|28881990|ref|NP_795800.1| cytochrome c oxidase subunit III [Nansenia ardesiaca] gi|28804919|dbj|BAC58205.1| cytochrome c oxidase subunit III [Nansenia ardesiaca] Length = 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + + G G +++ S+ F F + G P+D F Sbjct: 68 EGDHTPPVQKGLRYGMILFITSEVFFFLGLFWAFYHASLAPTPELGGCWPPTGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGA-RKQAIQSLTLTIILGFYFTFLQGMEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 182 YEAPFTIADGVYGATFFVATGFHGLHVIIGSTFLAVCLLRQAQYHFTSEHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|66044394|ref|YP_234235.1| cytochrome c oxidase, subunit III [Pseudomonas syringae pv. syringae B728a] gi|63255101|gb|AAY36197.1| Cytochrome c oxidase, subunit III [Pseudomonas syringae pv. syringae B728a] Length = 210 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV Sbjct: 91 FAMLAL-YKGNKSQVLGWLALTFLCGAAFIGMEIYEFHHLIEEGYGPSRSGFLSAFFALV 149 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 GLHG HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG Sbjct: 150 GLHGAHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209 Query: 210 V 210 + Sbjct: 210 L 210 >gi|291612351|ref|YP_003540779.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha nuchalata] gi|189164407|gb|ACD77348.1| cytochrome c oxidase subunit III [Hypsiglena ochrorhyncha nuchalata] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLTVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|42783037|ref|NP_980284.1| cytochrome c oxidase, subunit III [Bacillus cereus ATCC 10987] gi|47565817|ref|ZP_00236856.1| cytochrome c oxidase subunit III [Bacillus cereus G9241] gi|52141547|ref|YP_085283.1| cytochrome c oxidase, subunit III [Bacillus cereus E33L] gi|75762088|ref|ZP_00741994.1| Cytochrome c oxidase polypeptide III [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|163941681|ref|YP_001646565.1| cytochrome c oxidase subunit III [Bacillus weihenstephanensis KBAB4] gi|206971235|ref|ZP_03232186.1| cytochrome c oxidase, subunit III [Bacillus cereus AH1134] gi|206978408|ref|ZP_03239278.1| cytochrome c oxidase, subunit III [Bacillus cereus H3081.97] gi|217961427|ref|YP_002339995.1| cytochrome c oxidase, subunit III [Bacillus cereus AH187] gi|218235434|ref|YP_002368742.1| cytochrome c oxidase, subunit III [Bacillus cereus B4264] gi|218899098|ref|YP_002447509.1| cytochrome c oxidase, subunit III [Bacillus cereus G9842] gi|222097390|ref|YP_002531447.1| cytochrome c oxidase, subunit iii [Bacillus cereus Q1] gi|228902448|ref|ZP_04066602.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 4222] gi|228909768|ref|ZP_04073591.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 200] gi|228922693|ref|ZP_04085992.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954218|ref|ZP_04116246.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960203|ref|ZP_04121860.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228966963|ref|ZP_04128001.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228974035|ref|ZP_04134608.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980627|ref|ZP_04140935.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis Bt407] gi|228987085|ref|ZP_04147210.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229013147|ref|ZP_04170291.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides DSM 2048] gi|229019144|ref|ZP_04175978.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1273] gi|229031572|ref|ZP_04187572.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1271] gi|229047627|ref|ZP_04193216.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH676] gi|229071441|ref|ZP_04204663.1| Cytochrome c oxidase subunit 3 [Bacillus cereus F65185] gi|229075698|ref|ZP_04208680.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-18] gi|229081194|ref|ZP_04213704.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-2] gi|229098412|ref|ZP_04229357.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-29] gi|229104504|ref|ZP_04235171.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-28] gi|229111412|ref|ZP_04240964.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-15] gi|229117438|ref|ZP_04246814.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-3] gi|229129219|ref|ZP_04258192.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-Cer4] gi|229134750|ref|ZP_04263559.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST196] gi|229140670|ref|ZP_04269218.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST26] gi|229146513|ref|ZP_04274884.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST24] gi|229152140|ref|ZP_04280334.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1550] gi|229157519|ref|ZP_04285596.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 4342] gi|229168681|ref|ZP_04296403.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH621] gi|229180217|ref|ZP_04307561.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 172560W] gi|229192150|ref|ZP_04319118.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 10876] gi|229198058|ref|ZP_04324770.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1293] gi|296504436|ref|YP_003666136.1| cytochrome c oxidase polypeptide III [Bacillus thuringiensis BMB171] gi|42738964|gb|AAS42892.1| cytochrome c oxidase, subunit III [Bacillus cereus ATCC 10987] gi|47557097|gb|EAL15426.1| cytochrome c oxidase subunit III [Bacillus cereus G9241] gi|51975016|gb|AAU16566.1| cytochrome c oxidase, subunit III [Bacillus cereus E33L] gi|74490422|gb|EAO53732.1| Cytochrome c oxidase polypeptide III [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|163863878|gb|ABY44937.1| cytochrome c oxidase subunit III [Bacillus weihenstephanensis KBAB4] gi|206734007|gb|EDZ51178.1| cytochrome c oxidase, subunit III [Bacillus cereus AH1134] gi|206743388|gb|EDZ54825.1| cytochrome c oxidase, subunit III [Bacillus cereus H3081.97] gi|217067304|gb|ACJ81554.1| cytochrome c oxidase, subunit III [Bacillus cereus AH187] gi|218163391|gb|ACK63383.1| cytochrome c oxidase, subunit III [Bacillus cereus B4264] gi|218541319|gb|ACK93713.1| cytochrome c oxidase, subunit III [Bacillus cereus G9842] gi|221241448|gb|ACM14158.1| cytochrome c oxidase, subunit III [Bacillus cereus Q1] gi|228585416|gb|EEK43522.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1293] gi|228591357|gb|EEK49208.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 10876] gi|228603426|gb|EEK60903.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 172560W] gi|228614837|gb|EEK71940.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH621] gi|228625969|gb|EEK82719.1| Cytochrome c oxidase subunit 3 [Bacillus cereus ATCC 4342] gi|228631332|gb|EEK87967.1| Cytochrome c oxidase subunit 3 [Bacillus cereus m1550] gi|228637146|gb|EEK93605.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST24] gi|228642742|gb|EEK99025.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST26] gi|228648796|gb|EEL04822.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-ST196] gi|228654456|gb|EEL10321.1| Cytochrome c oxidase subunit 3 [Bacillus cereus BDRD-Cer4] gi|228666048|gb|EEL21514.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-3] gi|228672028|gb|EEL27320.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock1-15] gi|228678946|gb|EEL33156.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-28] gi|228685029|gb|EEL38962.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-29] gi|228702238|gb|EEL54714.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-2] gi|228707474|gb|EEL59665.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock4-18] gi|228711732|gb|EEL63685.1| Cytochrome c oxidase subunit 3 [Bacillus cereus F65185] gi|228723721|gb|EEL75077.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH676] gi|228729861|gb|EEL80841.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1271] gi|228742160|gb|EEL92326.1| Cytochrome c oxidase subunit 3 [Bacillus cereus AH1273] gi|228748097|gb|EEL97958.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides DSM 2048] gi|228772679|gb|EEM21120.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228779095|gb|EEM27354.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis Bt407] gi|228785671|gb|EEM33677.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792697|gb|EEM40261.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228799471|gb|EEM46431.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805538|gb|EEM52129.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836967|gb|EEM82309.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228850057|gb|EEM94888.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 200] gi|228857192|gb|EEN01698.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis IBL 4222] gi|296325488|gb|ADH08416.1| cytochrome c oxidase polypeptide III [Bacillus thuringiensis BMB171] gi|324327842|gb|ADY23102.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis serovar finitimus YBT-020] gi|326941714|gb|AEA17610.1| cytochrome c oxidase polypeptide III [Bacillus thuringiensis serovar chinensis CT-43] Length = 207 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 104/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKKMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|127511302|ref|YP_001092499.1| cytochrome c oxidase, subunit III [Shewanella loihica PV-4] gi|126636597|gb|ABO22240.1| cytochrome c oxidase, subunit III [Shewanella loihica PV-4] Length = 208 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 94/193 (48%), Positives = 129/193 (66%), Gaps = 3/193 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 ++ + T LGFWIYLM+DC++FA F TYAVL N G + DVF++ + + Sbjct: 18 HEEHHDT--GENTLLGFWIYLMTDCILFASAFATYAVLYMNTDGGVSGKDVFELDFVLIE 75 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ A L A + T++WL VT G +FI ME+ EF HLI PQ Sbjct: 76 TAALLLSSITYGLA-LIFAKRHHKGATLAWLAVTFALGCVFIGMEVNEFHHLILEGNGPQ 134 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSAFLS+FFALVG+HGLHV GL+W+ +++++++K+G RL CLS+FWHFLD++W Sbjct: 135 RSAFLSAFFALVGMHGLHVSAGLVWMAIMMLEVVKRGTGGRTLTRLNCLSLFWHFLDIVW 194 Query: 198 ICVFSFVYLMGVV 210 ICVF+ VYLMGV+ Sbjct: 195 ICVFTVVYLMGVL 207 >gi|38707471|ref|NP_944769.1|COX3_17487 cytochrome c oxidase subunit III [Phocoena phocoena] gi|38602592|emb|CAD88046.1| cytochrome c oxidase polypeptide III [Phocoena phocoena] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S+ L F FF + + PA I + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPAGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H T+ LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-TLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + ++ L S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQLTFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|209808984|ref|YP_002264522.1| cytochrome o ubiquinol oxidase subunit III [Aliivibrio salmonicida LFI1238] gi|208010546|emb|CAQ80915.1| cytochrome o ubiquinol oxidase subunit III [Aliivibrio salmonicida LFI1238] Length = 202 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 124/179 (69%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++F F TYAVL A GP+ D+F++ +FV T++LLLSS++ F Sbjct: 25 YGFWIYLMSDCILFGSLFATYAVLVNATAGGPSGKDIFELPFVFVETMLLLLSSITFGFG 84 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 ++A + + WLL+TA G+ FI ME+YEF HLI PQRSAFLS+FF LVG Sbjct: 85 IIAMKRED-LAGLKRWLLITALLGLGFISMEVYEFNHLIGEGFGPQRSAFLSAFFTLVGT 143 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV FGLIWL V Q+ KGL + R CLS+FWHFLD++WICVF+ VYL+GV+ Sbjct: 144 HGLHVTFGLIWLSVCYFQLNTKGLNDLMKGRFYCLSLFWHFLDIVWICVFTIVYLLGVI 202 >gi|56421992|ref|YP_149310.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus kaustophilus HTA426] gi|56381834|dbj|BAD77742.1| cytochrome aa3 quinol oxidase subunit III [Geobacillus kaustophilus HTA426] Length = 204 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 75/179 (41%), Positives = 115/179 (64%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ +FA F TY VL + +GP ++F++ + + T++LL SS +C A Sbjct: 26 LGFWIFLGAEVALFATLFATYLVLFQRTGSGPTAGELFEVKDVLIETLLLLTSSFTCGLA 85 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + R+ ++WLLVT G+ FI EI EF H + A Q SAFLSSFF LVG Sbjct: 86 IFEMRRGRIS-GLIAWLLVTLLLGVGFITFEIREFIHYVHEGATMQTSAFLSSFFVLVGT 144 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+ W+ +++IQ+L++G R++ +S++WHFLD++WI +F+ VYL+G+V Sbjct: 145 HGAHVSVGIGWMILIIIQLLQRGFTPKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 203 >gi|229174609|ref|ZP_04302138.1| Cytochrome c oxidase subunit 3 [Bacillus cereus MM3] gi|228608861|gb|EEK66154.1| Cytochrome c oxidase subunit 3 [Bacillus cereus MM3] Length = 207 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 104/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKKMQLWLLVTVLLGLGFLAFEIYEFYHYTHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|170676088|ref|YP_001742111.1| cytochrome c oxidase subunit III [Spilogale putorius] gi|155368576|emb|CAM98591.1| cytochrome c oxidase subunit III [Spilogale putorius] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK---------NYAAGPAPIDVF 69 + + G G ++++S+ FA FF + G P++ Sbjct: 68 QGHHTPIVQKGLRYGMVLFILSEVFSFAGFFWAFYHSSLAPTPDLGGCWPPTGILPLNPL 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 D+ ++T VLL S ++ ++A + H + L +T G+ F ++ E+ Sbjct: 128 DVP--LLNTSVLLASGVTITWAHHSLMEGNRKH-MLQALFITISLGLYFTALQASEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L + ++ L S + + + Sbjct: 182 YETSFTISDGVYGSTFFMATGFHGLHVIIGSTFLIICFLRQLNYHFTSSHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|84623174|ref|YP_450546.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84367114|dbj|BAE68272.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 208 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 28 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 87 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ W+ VTA G+ F+ MEI+EF HLI A P RSAFLS+FF L Sbjct: 88 GFAMIAAHKRKM-GGLYGWMAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTL 146 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 147 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 206 Query: 209 VV 210 + Sbjct: 207 AL 208 >gi|330859962|emb|CBX70291.1| cytochrome o ubiquinol oxidase subunit 3 [Yersinia enterocolitica W22703] Length = 198 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 92/189 (48%), Positives = 124/189 (65%), Gaps = 1/189 (0%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIF 75 + GFWIYLMSDC++FA F TYAVL A GP+ D+FD++ + Sbjct: 11 VAHAEHGHHDAGATKVFGFWIYLMSDCILFATLFATYAVLVNGTAGGPSGRDIFDLNFVL 70 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 V T +LL SS++ AML K ++ +WL +T FG+ F+ MEIYEF HLI+ Sbjct: 71 VETFLLLFSSITYGIAML-GMNKGHKNQVNTWLGLTFLFGLGFVAMEIYEFHHLIAEGYG 129 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 P RSAFLSSFFALV HG+HV GL+W+ +++IQ+ K+GL N+ RL+CLS+FWHFLD+ Sbjct: 130 PDRSAFLSSFFALVATHGIHVTAGLVWIIIMMIQVAKRGLNETNRTRLMCLSLFWHFLDV 189 Query: 196 IWICVFSFV 204 +WICVF+ V Sbjct: 190 VWICVFTVV 198 >gi|294679522|gb|ADF29564.1| cytochrome c oxidase subunit III [Globicephala macrorhynchus] gi|326370283|gb|ADZ56121.1| cytochrome c oxidase subunit III [Globicephala macrorhynchus] gi|326370297|gb|ADZ56134.1| cytochrome c oxidase subunit III [Globicephala macrorhynchus] gi|326370309|gb|ADZ56145.1| cytochrome c oxidase subunit III [Globicephala macrorhynchus] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEILFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMQGNRKH-MLQALLITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMLFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|154090914|ref|YP_001403161.1| cytochrome c oxidase subunit III [Reinhardtius hippoglossoides] gi|153581803|emb|CAO79727.1| cytochrome oxidase subunit III [Reinhardtius hippoglossoides] gi|153581817|emb|CAO79740.1| cytochrome oxidase subunit III [Reinhardtius hippoglossoides] gi|153581831|emb|CAO79753.1| cytochrome oxidase subunit III [Reinhardtius hippoglossoides] gi|153581845|emb|CAO79766.1| cytochrome oxidase subunit III [Reinhardtius hippoglossoides] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQMGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + +T+ L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQTIQSLALTILLGGYFTFLQGLEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 182 VEAPFTIADGVYGATFFVATGFHGLHVLIGTSFLAVCLLRQILHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|113867093|ref|YP_725582.1| bo3-type quinol oxidase, subunit III [Ralstonia eutropha H16] gi|113525869|emb|CAJ92214.1| bo3-type quinol oxidase, subunit III [Ralstonia eutropha H16] Length = 214 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 1/180 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFWIYLMSDC++FA F +AVL A GP+ ++F+++ + V T +LL SS++ Sbjct: 34 NTVYGFWIYLMSDCIIFAGLFAAFAVLRGELAGGPSAKELFELNYVLVETFILLFSSITY 93 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 AM++ R + + WL VT G F+ MEI EF HLI+ A P RSAFLSSFF L Sbjct: 94 GMAMISLQ-NRSLSRVQVWLGVTFLLGAAFMAMEINEFHHLIAEGAGPGRSAFLSSFFTL 152 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV G++W+ VL+ Q+ KKG+ +RL+CLS+FWHFLD++WI VF+ VYLMG Sbjct: 153 VGTHGLHVASGMLWMIVLMWQLSKKGITPTLSKRLMCLSLFWHFLDVVWIGVFTVVYLMG 212 >gi|298110740|gb|ADI57703.1| cytochrome c oxidase subunit III [Ovis aries] gi|298110754|gb|ADI57716.1| cytochrome c oxidase subunit III [Ovis aries] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGSRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|158337735|ref|YP_001518911.1| cytochrome c oxidase subunit III [Acaryochloris marina MBIC11017] gi|158307976|gb|ABW29593.1| cytochrome c oxidase subunit III [Acaryochloris marina MBIC11017] Length = 208 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 5/193 (2%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA-PIDVFDISGIF 75 V+ + D GF ++L+S+ ++F FV Y P + ++ Sbjct: 19 VETAEHHSEHPDLRLFGFIVFLVSESMLFLGLFVAYFAFRVVTPEWPPEGTEELELMLPG 78 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 ++TI+L+ SS A A + W +T G F+ ++YE+ H + Sbjct: 79 INTIILISSSFVIHKADTAIKQSGDVKAARLWFAITIAMGATFLAGQVYEYNH---LGFG 135 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLD 194 + F S+F+ L G HGLHVF GL+ + ++ + + + ++WHF+D Sbjct: 136 LTTNLFASTFYLLTGFHGLHVFVGLLLMSAVLWRSRVPGHYSETSHFGIEATEVYWHFVD 195 Query: 195 LIWICVFSFVYLM 207 +IWI +F +YL+ Sbjct: 196 VIWIVLFLILYLL 208 >gi|30264013|ref|NP_846390.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Ames] gi|47529450|ref|YP_020799.1| cytochrome c oxidase subunit III [Bacillus anthracis str. 'Ames Ancestor'] gi|49186852|ref|YP_030104.1| cytochrome c oxidase subunit III [Bacillus anthracis str. Sterne] gi|49478458|ref|YP_038004.1| cytochrome c oxidase subunit III [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321337|ref|ZP_00394296.1| COG1845: Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Bacillus anthracis str. A2012] gi|118479159|ref|YP_896310.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis str. Al Hakam] gi|165872133|ref|ZP_02216772.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0488] gi|167633499|ref|ZP_02391823.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0442] gi|167640968|ref|ZP_02399225.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0193] gi|170688794|ref|ZP_02879998.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0465] gi|170705795|ref|ZP_02896258.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0389] gi|177654276|ref|ZP_02936205.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0174] gi|190565931|ref|ZP_03018850.1| cytochrome c oxidase, subunit III [Bacillus anthracis Tsiankovskii-I] gi|196035910|ref|ZP_03103312.1| cytochrome c oxidase, subunit III [Bacillus cereus W] gi|196038642|ref|ZP_03105950.1| cytochrome c oxidase, subunit III [Bacillus cereus NVH0597-99] gi|196045939|ref|ZP_03113168.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB108] gi|218905073|ref|YP_002452907.1| cytochrome c oxidase, subunit III [Bacillus cereus AH820] gi|225865924|ref|YP_002751302.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB102] gi|227816716|ref|YP_002816725.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. CDC 684] gi|228916579|ref|ZP_04080145.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928989|ref|ZP_04092021.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935257|ref|ZP_04098083.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947661|ref|ZP_04109951.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092991|ref|ZP_04224122.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-42] gi|229123463|ref|ZP_04252662.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 95/8201] gi|229604758|ref|YP_002868242.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0248] gi|254683709|ref|ZP_05147569.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. CNEVA-9066] gi|254736054|ref|ZP_05193760.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Western North America USA6153] gi|254743945|ref|ZP_05201628.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Kruger B] gi|254754276|ref|ZP_05206311.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Vollum] gi|254758033|ref|ZP_05210060.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Australia 94] gi|301055433|ref|YP_003793644.1| cytochrome c oxidase subunit III [Bacillus anthracis CI] gi|30258658|gb|AAP27876.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Ames] gi|47504598|gb|AAT33274.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. 'Ames Ancestor'] gi|49180779|gb|AAT56155.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. Sterne] gi|49330014|gb|AAT60660.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118418384|gb|ABK86803.1| cytochrome c oxidase, subunit III [Bacillus thuringiensis str. Al Hakam] gi|164712080|gb|EDR17618.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0488] gi|167511018|gb|EDR86407.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0193] gi|167530905|gb|EDR93592.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0442] gi|170129335|gb|EDS98199.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0389] gi|170667310|gb|EDT18069.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0465] gi|172080766|gb|EDT65847.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0174] gi|190562850|gb|EDV16816.1| cytochrome c oxidase, subunit III [Bacillus anthracis Tsiankovskii-I] gi|195991559|gb|EDX55525.1| cytochrome c oxidase, subunit III [Bacillus cereus W] gi|196023379|gb|EDX62057.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB108] gi|196030365|gb|EDX68964.1| cytochrome c oxidase, subunit III [Bacillus cereus NVH0597-99] gi|218537730|gb|ACK90128.1| cytochrome c oxidase, subunit III [Bacillus cereus AH820] gi|225788326|gb|ACO28543.1| cytochrome c oxidase, subunit III [Bacillus cereus 03BB102] gi|227005165|gb|ACP14908.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. CDC 684] gi|228659950|gb|EEL15591.1| Cytochrome c oxidase subunit 3 [Bacillus cereus 95/8201] gi|228690362|gb|EEL44148.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-42] gi|228812181|gb|EEM58512.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824422|gb|EEM70228.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830796|gb|EEM76401.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843158|gb|EEM88240.1| Cytochrome c oxidase subunit 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229269166|gb|ACQ50803.1| cytochrome c oxidase, subunit III [Bacillus anthracis str. A0248] gi|300377602|gb|ADK06506.1| cytochrome c oxidase, subunit III [Bacillus cereus biovar anthracis str. CI] Length = 207 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 104/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKKMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|166713086|ref|ZP_02244293.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv. oryzicola BLS256] Length = 210 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 101/182 (55%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 30 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 89 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ MEI+EF HLI A P RSAFLS+FF L Sbjct: 90 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTL 148 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 149 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 208 Query: 209 VV 210 + Sbjct: 209 AL 210 >gi|94502578|ref|YP_588406.1| cytochrome c oxidase subunit 3 [Zea mays subsp. mays] gi|114151570|ref|YP_740377.1| cytochrome c oxidase subunit 3 [Zea perennis] gi|114151602|ref|YP_740446.1| cytochrome c oxidase subunit 3 [Zea luxurians] gi|114151636|ref|YP_740413.1| cytochrome c oxidase subunit 3 [Zea mays subsp. parviglumis] gi|115278538|ref|YP_762331.1| cytochrome c oxidase subunit 3 [Sorghum bicolor] gi|115278608|ref|YP_762504.1| cytochrome c oxidase subunit 3 [Tripsacum dactyloides] gi|117070|sp|P14852|COX3_ORYSI RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|100867|pir||S20801 cytochrome-c oxidase (EC 1.9.3.1) chain III - maize mitochondrion gi|13217|emb|CAA34898.1| unnamed protein product [Oryza sativa Indica Group] gi|14296|emb|CAA37222.1| cytochrome oxidase subunit 3 [Zea mays] gi|804815|gb|AAA66048.1| cytochrome oxidase subunit III [Oryza sativa Indica Group] gi|40795017|gb|AAR91061.1| cytochrome c oxidase subunit 3 [Zea mays] gi|93116046|gb|ABE98679.1| cytochrome c oxidase subunit 3 [Zea mays subsp. mays] gi|93116090|gb|ABE98722.1| cytochrome c oxidase subunit 3 [Zea mays subsp. mays] gi|93116135|gb|ABE98766.1| cytochrome c oxidase subunit 3 [Zea mays subsp. mays] gi|102567904|gb|ABF70821.1| cytochrome c oxidase subunit 3 [Zea perennis] gi|102567969|gb|ABF70853.1| cytochrome c oxidase subunit 3 [Zea mays subsp. parviglumis] gi|102579639|gb|ABF70919.1| cytochrome c oxidase subunit 3 [Zea mays subsp. mays] gi|110287598|gb|ABG65644.1| cytochrome c oxidase subunit 3 [Zea luxurians] gi|114309659|gb|ABI60876.1| cytochrome c oxidase subunit 3 [Sorghum bicolor] gi|114432099|gb|ABI74648.1| cytochrome c oxidase subunit 3 [Tripsacum dactyloides] Length = 265 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|56713972|gb|AAW23979.1| cytochrome c oxidase subunit III [Ovis aries] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYXSIYWWG 260 >gi|51979792|gb|AAU20467.1| cytochrome c oxidase subunit III [Hydromantes italicus] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G +++ S+ L F FF + + L + G Sbjct: 68 QGHHTTPVQKGLRYGMILFITSEVLFFGGFFWAFYNSSLSPTFELGETWPPTGISPLDPF 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + +T+ LL+T G+ F ++ E+ Sbjct: 128 EVPLLNTAVLLTSGVTVTWAHHSIMVGN-RKETIQSLLLTTILGLYFTALQAMEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 V + S+FF G HGLHV G ++L V +I+ + S + + +WH Sbjct: 184 APFVIADGIYGSTFFIATGFHGLHVIIGSLFLLVCLIRQINFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|78046865|ref|YP_363040.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035295|emb|CAJ22940.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 208 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 28 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 87 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 88 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTL 146 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 147 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 206 Query: 209 VV 210 + Sbjct: 207 AL 208 >gi|309253117|gb|ADO60520.1| cytochrome c oxidase subunit III [Lycus dentipes] Length = 281 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 9/193 (4%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDISGIF 75 + +G G +++ S+ L F FF +Y + + P I F+ + I Sbjct: 71 HTKKVVNGLKWGMILFITSEVLFFVSFFWSYFHSSLSPSIEIGLLWPPQEILTFNPTEIP 130 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 + ++L+SS S + + + + L++T G+ F I++ +E+ + Sbjct: 131 LLNTIVLISSGISVTWAHHSLMENDLKQAIYSLIITVALGIYFTILQGFEY---LESAFS 187 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 S + S+FF G HG+HV G +L +++I+ S + + +WHF+D+ Sbjct: 188 IADSVYGSTFFMTTGFHGIHVIIGTSFLLIILIRTYLNHFSSKHHFGFEAAAWYWHFVDV 247 Query: 196 IWICVFSFVYLMG 208 +W+ ++ +Y G Sbjct: 248 VWLFLYISIYWWG 260 >gi|330011526|ref|ZP_08307112.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. MS 92-3] gi|328534143|gb|EGF60778.1| cytochrome o ubiquinol oxidase, subunit III [Klebsiella sp. MS 92-3] Length = 181 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 99/179 (55%), Positives = 124/179 (69%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ A Sbjct: 4 FGFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMA 63 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A K + VSWL +T FG FI MEIYEF HLI P RS FLS+FFALVG Sbjct: 64 AIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGPDRSGFLSAFFALVGT 122 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG + Sbjct: 123 HGLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLSLFWHFLDVVWICVFSVVYLMGAM 181 >gi|294664344|ref|ZP_06729708.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605884|gb|EFF49171.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 208 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 28 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 87 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 88 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTL 146 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 147 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 206 Query: 209 VV 210 + Sbjct: 207 AL 208 >gi|256985329|ref|YP_003162765.1| cytochrome c oxidase subunit III [Psetta maxima] gi|166065508|gb|ABY79841.1| cytochrome oxidase subunit 3 [Scophthalmus maximus] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 15/196 (7%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVFDIS 72 + G G +++ S+ L F FF + AG P+D F++ Sbjct: 71 HTPPVQKGLRYGMILFIASEVLFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLDPFEVP 130 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 ++T VLL S ++ ++A + + + L +T G F ++ E+ Sbjct: 131 --LLNTTVLLASGVTVTWAHHSIIEGE-RKQAIQALTLTILLGGYFTFLQAMEYC---EA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + ++FF G HGLHV G +L + ++ ++ S + + +WHF Sbjct: 185 PFTIADGVYGATFFVATGFHGLHVLIGSTFLGICHLRQVQNHFTSTHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLLLYISIYWWG 260 >gi|222839824|ref|YP_002587040.1| cytochrome c oxidase subunit III [Sousa chinensis] gi|170026948|gb|ACB06003.1| cytochrome c oxidase subunit III [Sousa chinensis] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|326370395|gb|ADZ56225.1| cytochrome c oxidase subunit III [Steno bredanensis] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|38707577|ref|NP_944756.1| cytochrome c oxidase subunit III [Monodon monoceros] gi|38602578|emb|CAD88033.1| cytochrome c oxidase polypeptide III [Monodon monoceros] Length = 261 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEALFFMGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H T+ LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-TLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ L S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQLTFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYISIYWWG 260 >gi|22653449|gb|AAN04067.1| cytochrome c oxidase subunit 3 [Amoebidium parasiticum] Length = 262 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 10/196 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + + + G G ++++S+ ++F FF Y + P I+V + Sbjct: 68 EGQHTLEVQRGLKEGMILFIVSEAMLFFAFFWAYFHSSLSPSVELGAVWPPTGIEVLNPW 127 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +LL S + ++A A +R +T+ L +T G IF ++ E+ Sbjct: 128 HVPLLNTAILLSSGATVTWAHHALIARRSRAETIQGLGLTILLGFIFTGLQGMEY---YE 184 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + ++F++ GLHG+HV G ++L V ++L + + L ++WH Sbjct: 185 ASFTIADSVYGATFYSTTGLHGIHVIIGTLFLTVCFFRLLNYHYTTNHHLGLEAAILYWH 244 Query: 192 FLDLIWICVFSFVYLM 207 F+D +W+ VF Y+ Sbjct: 245 FVDYVWLLVFICYYVW 260 >gi|322383504|ref|ZP_08057279.1| cytochrome caa3 oxidase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152216|gb|EFX45047.1| cytochrome caa3 oxidase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 193 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ LGFW++L + ++F F TY L + G ++F + I ++T Sbjct: 2 EPEKATLEGKNKVLGFWLFLGGETVLFGCLFATYLALRNSVGDGKTSDELFQLPMIALAT 61 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 +LL SSL+ FA++A R + + WL ++ G+ F+ +EIYEF + Sbjct: 62 FLLLTSSLTSVFAVMALHRHR-LQSMLRWLAISVVLGLAFLGLEIYEFVEYVHEGHGFTT 120 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF +SF++LVG HG HV FG++W+ +L+IQ KKGL + + +++WHF+D++W+ Sbjct: 121 SAFSTSFYSLVGFHGAHVLFGILWISLLIIQGSKKGLTTVTAPKFYIAALYWHFIDVVWV 180 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG V Sbjct: 181 FIFTVVYLMGKV 192 >gi|90409891|ref|ZP_01217908.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium profundum 3TCK] gi|90329244|gb|EAS45501.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium profundum 3TCK] Length = 211 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 97/184 (52%), Positives = 123/184 (66%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 + GFWIYLMSDC++FA F TYAVL A GP+ D+FD+ +F T++LL SS+ Sbjct: 29 GETKQFGFWIYLMSDCILFASLFATYAVLVNGIAGGPSGKDIFDLPFVFTETMLLLFSSI 88 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + F ++A + WL +T FG+ FI ME++EF HLI+ PQRSAFLS+FF Sbjct: 89 TFGFGIIAMKRND-VAGLKRWLAITFLFGLSFIAMELWEFHHLINEGFGPQRSAFLSAFF 147 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 LVG HGLHV GLIWL V Q+ KGL S Q R CLS+FWHFLD++WICVF+ VYL Sbjct: 148 TLVGTHGLHVTAGLIWLSVCYYQVSTKGLTSMMQTRFYCLSLFWHFLDIVWICVFTIVYL 207 Query: 207 MGVV 210 +GVV Sbjct: 208 LGVV 211 >gi|30022030|ref|NP_833661.1| cytochrome c oxidase polypeptide III [Bacillus cereus ATCC 14579] gi|29897586|gb|AAP10862.1| Cytochrome c oxidase polypeptide III [Bacillus cereus ATCC 14579] Length = 207 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 103/192 (53%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKKMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF +F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGYAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|15987265|ref|NP_387478.1|COX3_15795 cytochrome c oxidase subunit III [Neoceratodus forsteri] gi|15810684|gb|AAL08594.1|AF302933_5 cytochrome oxidase subunit 3 [Neoceratodus forsteri] Length = 261 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ L F F + P I D Sbjct: 68 QGHHTLPVQKGLRYGMILFITSEVLFFFGIFWAFYHSSLAPTPELGGCWPPTGIIPLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G F ++ E+ Sbjct: 128 EVPLVNTAVLLASGVTVTWAHHSLMEGKRKEAIQSLAITILLGFYFTALQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V +++ ++ S + + +WHF Sbjct: 185 PFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQMQYHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|58581254|ref|YP_200270.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425848|gb|AAW74885.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas oryzae pv. oryzae KACC10331] Length = 210 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 30 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 89 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ W+ VTA G+ F+ MEI+EF HLI A P RSAFLS+FF L Sbjct: 90 GFAMIAAHKRKM-GGLYGWMAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTL 148 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 149 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 208 Query: 209 VV 210 + Sbjct: 209 AL 210 >gi|291612421|ref|YP_003540890.1| cytochrome c oxidase subunit III [Hypsiglena chlorophaea deserticola] gi|189164491|gb|ACD77426.1| cytochrome c oxidase subunit III [Hypsiglena chlorophaea deserticola] Length = 261 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLMVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|238866939|ref|YP_002929418.1| cytochrome c oxidase subunit III [Elaphe poryphyracea] gi|238626010|gb|ACR48293.1| cytochrome c oxidase subunit 3 [Elaphe poryphyracea] Length = 261 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGITPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + + L++T G+ F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHTMMKGNKKEATNALMLTIILGVYFTVLQASEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + +I++ K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTTFLMICMIRLNKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|116014317|ref|YP_788136.1| cytochrome c oxidase subunit III [Verasper moseri] gi|115498276|gb|ABI98719.1| cytochrome c oxidase subunit III [Verasper moseri] Length = 261 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTLPVQKGLRYGMILFITSEVLFFLGFFWAFYHSSLAPTPELGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIHSLALTILLGGYFTFLQALEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + S + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSSFLAVCLLRQILHHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|291612267|ref|YP_003540701.1| cytochrome c oxidase subunit III [Hypsiglena chlorophaea chlorophaea] gi|189164565|gb|ACD77494.1| cytochrome c oxidase subunit III [Hypsiglena chlorophaea chlorophaea] Length = 261 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGIYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLMVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|172061020|ref|YP_001808672.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia ambifaria MC40-6] gi|171993537|gb|ACB64456.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria MC40-6] Length = 202 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 103/195 (52%), Positives = 131/195 (67%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLAWLAVTFALGAAFLAMELREFSHLIADGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVLRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|156878377|ref|YP_001434507.1| cytochrome c oxidase subunit III [Pantherophis slowinskii] gi|94537524|gb|ABF29853.1| cytochrome c oxidase subunit 3 [Pantherophis slowinskii] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGITPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + + +LLSS + + ++ L++T G+ F ++ E+ Sbjct: 126 PTEVPLLNTAVLLSSGATITWSHHTMMSGNKKESTYALIITIILGVYFTALQASEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + +I+++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTTFLMICMIRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|167589185|ref|ZP_02381573.1| cytochrome c oxidase, subunit III [Burkholderia ubonensis Bu] Length = 204 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 101/198 (51%), Positives = 127/198 (64%), Gaps = 5/198 (2%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + + D + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G Sbjct: 11 VGHADDHDHPP---SHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPG 67 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + V T LLLSS++ FAML + T+ WL VT G F+ ME+ EFAHLI+ Sbjct: 68 VAVETAALLLSSITYGFAMLGAHR-GKRGVTLVWLAVTFVLGAAFLAMELREFAHLIAEG 126 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFWHF 192 A PQRSAFLS+FF LVG HGLHV GL+W+ VL Q+ L + RRL CLS+FWHF Sbjct: 127 AGPQRSAFLSAFFTLVGTHGLHVSAGLVWMIVLAAQVAFGRELTERDIRRLTCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGVV 210 LD++WICVFSFVYL V+ Sbjct: 187 LDIVWICVFSFVYLASVI 204 >gi|57282273|emb|CAD32365.1| cytochrome oxidase subunit 3 [Xerophyllum tenax] Length = 265 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALAATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|289670392|ref|ZP_06491467.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 210 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 30 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 89 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 90 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPSRSAFLSAFFTL 148 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 149 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 208 Query: 209 VV 210 + Sbjct: 209 AL 210 >gi|289678124|ref|ZP_06499014.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. syringae FF5] Length = 210 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T G FI ME+YEF HLI P RS FLS+FFALV Sbjct: 91 FAMLAL-YKGNKSQVLGWLALTFLCGAAFIGMEVYEFHHLIEEGFGPSRSGFLSAFFALV 149 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 GLHG+HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG Sbjct: 150 GLHGVHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209 Query: 210 V 210 + Sbjct: 210 L 210 >gi|171318687|ref|ZP_02907831.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria MEX-5] gi|171096122|gb|EDT41047.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria MEX-5] Length = 202 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 103/195 (52%), Positives = 131/195 (67%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLAWLAVTFVLGAAFLAMELREFSHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVLRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|28868535|ref|NP_791154.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas syringae pv. tomato str. DC3000] gi|213968331|ref|ZP_03396475.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tomato T1] gi|301383463|ref|ZP_07231881.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tomato Max13] gi|302060280|ref|ZP_07251821.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tomato K40] gi|302129917|ref|ZP_07255907.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851773|gb|AAO54849.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tomato str. DC3000] gi|213926969|gb|EEB60520.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tomato T1] gi|331015176|gb|EGH95232.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 210 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV Sbjct: 91 FAMLAL-YKGKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALV 149 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 GLHG+HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG Sbjct: 150 GLHGVHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209 Query: 210 V 210 + Sbjct: 210 L 210 >gi|75914857|gb|ABA29790.1| cytochrome c oxidase subunit III [Mammuthus primigenius] Length = 269 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V +G G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|70732059|ref|YP_261815.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas fluorescens Pf-5] gi|68346358|gb|AAY93964.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens Pf-5] Length = 204 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 92/197 (46%), Positives = 128/197 (64%), Gaps = 2/197 (1%) Query: 13 SLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDIS 72 + + ++ GFW+YLM+DC++FA F +YAVL + A GP+ +DVF++ Sbjct: 9 DIAHSHEQGHEDAGSL-RLFGFWVYLMTDCILFATLFASYAVLRDSVAGGPSTMDVFELP 67 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + T++LLLSS++ FAMLA + + + WL +TA G+ F+ MEI EF LIS Sbjct: 68 YVLAETLLLLLSSITYGFAMLA-MNRDQRTQVLRWLGLTALLGLGFVAMEINEFHQLISE 126 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 P RS FLS+FF LVG HGLHV GL+W+ VL+ Q+ +GL + RL CLS+FWHF Sbjct: 127 GHGPDRSGFLSAFFTLVGTHGLHVACGLVWMAVLMWQVHSRGLGAIQATRLSCLSLFWHF 186 Query: 193 LDLIWICVFSFVYLMGV 209 LD+IWICVF+ VYL+GV Sbjct: 187 LDVIWICVFTVVYLLGV 203 >gi|9695366|ref|NP_037588.1| cytochrome c oxidase subunit III [Paralichthys olivaceus] gi|6683100|dbj|BAA89039.1| cytochrome oxidase subunit-3 [Paralichthys olivaceus] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPIDVF 69 + G G +++ S+ L F FF + AG P+D F Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVLFFLGFFWAFYHASLAPTPELGGFWPPAGITPLDPF 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S ++ ++A + + + + L +T G F ++ E+ Sbjct: 128 EVP--LLNTAVLLASGVTVTWAHHSIMEGK-RKQAIHSLFLTILLGGYFTFLQALEYH-- 182 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + ++FF G HGLHV G +L V +++ + + + + + Sbjct: 183 -EAPFTIADGVYGATFFVATGFHGLHVLIGSTFLAVCLLRQILHHFTANHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYISIYWWG 260 >gi|157367433|gb|ABV45568.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367447|gb|ABV45581.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367503|gb|ABV45633.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367571|gb|ABV45675.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367585|gb|ABV45688.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367599|gb|ABV45701.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367613|gb|ABV45714.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367627|gb|ABV45727.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367641|gb|ABV45740.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367655|gb|ABV45753.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367669|gb|ABV45766.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367683|gb|ABV45779.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367697|gb|ABV45792.1| cytochrome c oxidase subunit III [Mammuthus primigenius] Length = 269 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V +G G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQEGLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|148656389|ref|YP_001276594.1| cytochrome c oxidase subunit III [Roseiflexus sp. RS-1] gi|148568499|gb|ABQ90644.1| cytochrome c oxidase, subunit III [Roseiflexus sp. RS-1] Length = 202 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY---AAGPAPIDVFDIS 72 + + + D LG W ++ S+ L FA TY V P + DI Sbjct: 9 HGAVAHHTSLGVDNRKLGVWAFIGSETLFFATLITTYFVFAPVNRARPDFQDPREFLDIE 68 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 V +LL SSL+ A+ AS T L G+ FI + YEF HL Sbjct: 69 LTTVLASILLASSLTMVLALSASRRGDRRSFTTWLLATVG-LGLAFIGGQAYEFNHLYHE 127 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S F ++FF L G HG HV G+IWL + ++ N + ++WHF Sbjct: 128 GLTLSSSLFGTTFFVLTGFHGTHVAIGVIWLLSVFFKVRAYPDSPENVMDVEIAGLYWHF 187 Query: 193 LDLIWICVFSFVYLM 207 +DL+W+ +F VYL+ Sbjct: 188 VDLVWVAIFVLVYLI 202 >gi|89280753|ref|YP_514631.1| cytochrome c oxidase subunit 3 [Oryza sativa Indica Group] gi|74100120|gb|AAZ99284.1| cytochrome c oxidase subunit 3 [Oryza sativa Indica Group] Length = 280 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 86 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 145 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 146 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVSTGFQGMEY---YQ 201 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 202 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 261 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 262 FVDVVRLFPFVSIYWWGGI 280 >gi|164422225|gb|ABY55198.1| cox3 [Bambusa oldhamii] gi|291498601|gb|ADE08075.1| cox3-1 [Triticum aestivum] gi|291498602|gb|ADE08076.1| cox3-2 [Triticum aestivum] Length = 265 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|325928655|ref|ZP_08189834.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas perforans 91-118] gi|325540983|gb|EGD12546.1| cytochrome bo3 quinol oxidase subunit 3 [Xanthomonas perforans 91-118] Length = 210 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 30 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 89 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 90 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTL 148 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 149 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 208 Query: 209 VV 210 + Sbjct: 209 AL 210 >gi|5835567|ref|NP_008412.1|COX3_13947 cytochrome c oxidase subunit III [Ovis aries] gi|5921883|sp|O21619|COX3_SHEEP RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|3366635|gb|AAD10108.1| cytochrome c-oxidase subunit 3 [Ovis aries] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRYHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYMSIYWWG 260 >gi|219560208|gb|ACL27333.1| cytochrome c oxidase subunit III [Globicephala melas] gi|294679536|gb|ADF29577.1| cytochrome c oxidase subunit III [Globicephala melas] gi|326370257|gb|ADZ56097.1| cytochrome c oxidase subunit III [Globicephala melas] gi|326370271|gb|ADZ56110.1| cytochrome c oxidase subunit III [Globicephala melas] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEALFFTGFFWAFYHSSLAPTPELGGSWPPTGIRPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMQGNRKH-MLQALLITITLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIICFMRQMLFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|257487315|ref|ZP_05641356.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623937|ref|ZP_06456891.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646771|ref|ZP_06478114.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. aesculi str. 2250] gi|298485879|ref|ZP_07003955.1| Cytochrome O ubiquinol oxidase subunit III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159568|gb|EFI00613.1| Cytochrome O ubiquinol oxidase subunit III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 210 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV Sbjct: 91 FAMLAL-YKGKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALV 149 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 GLHG HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG Sbjct: 150 GLHGAHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209 Query: 210 V 210 + Sbjct: 210 L 210 >gi|109689602|ref|YP_659440.1| cytochrome c oxidase subunit III [Semnopithecus entellus] gi|88174239|gb|ABD39246.1| cytochrome c oxidase subunit III [Semnopithecus entellus] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG---------KNYAAGPAPID 67 + G G ++++S+ +FA FF + G P++ Sbjct: 66 TYQGHHTAPVQKGLRYGMILFIISEAFLFAGFFWAFYHSSLAPTPHLGGHWPPTGIIPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S ++ ++A + +T+ L +T G+ F +++I E+ Sbjct: 126 PLEVP--LLNTSVLLASGVTITWAHHSLMENN-RKQTIQALFITILLGIYFTLLQISEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HG HV G +L V I+ L S + + Sbjct: 182 --YEAPFTISDGIYGSTFFIATGFHGFHVIIGSTFLTVCFIRQLLYHFTSKHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLLLYISIYWWG 260 >gi|325511717|gb|ADZ23045.1| cytochrome c oxidase subunit III [Orcaella brevirostris] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQVMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|291612379|ref|YP_003540805.1| cytochrome c oxidase subunit III [Sibon nebulatus] gi|189164435|gb|ACD77374.1| cytochrome c oxidase subunit III [Sibon nebulatus] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYA----AGPAPIDVFD 70 + G +++ S+ F FF + L P I + Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAQWPPTGIIPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + + L+ T F G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMCGNKKEATFALMTTIFLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + S + S FF G HGLHV G +L + ++++++ + + +W Sbjct: 183 ETQFTISDSVYGSLFFVATGFHGLHVIIGTTFLTICMLRLIRHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|57281952|emb|CAD19463.1| cytochrome oxidase subunit 3 [Alstroemeria hybrid cultivar] gi|57282247|emb|CAD32352.1| cytochrome oxidase subunit 3 [Milligania stylosa] gi|57282251|emb|CAD32354.1| cytochrome oxidase subunit 3 [Doryanthes palmeri] gi|57282257|emb|CAD32357.1| cytochrome oxidase subunit 3 [Blandfordia punicea] Length = 265 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|189164351|gb|ACD77296.1| cytochrome c oxidase subunit III [Hypsiglena chlorophaea chlorophaea] Length = 261 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLMVCILRLIKHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|21325920|gb|AAM47526.1|AF280607_1 cytochrome oxidase subunit III [Solanum tuberosum] Length = 265 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + V G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|21622587|emb|CAD21712.2| cytochrome oxidase III [Odobenus rosmarus rosmarus] Length = 403 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVF 69 + G G +++ S+ + T + G G P++ Sbjct: 68 QGHHTPTVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPELGGCWPPTGITPLNPL 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S +S ++A L H + L +T G+ F +++ E+ Sbjct: 128 EVP--LLNTSVLLASGVSITWAHLCLMEGNRKH-MLQALFITILLGLYFTLLQASEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V ++ LK S + + + Sbjct: 182 YETSFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFLRQLKFHFTSNHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|15888114|ref|NP_353795.1| cytochrome c oxidase subunit III [Agrobacterium tumefaciens str. C58] gi|15155746|gb|AAK86580.1| cytochrome c oxidase subunit III [Agrobacterium tumefaciens str. C58] Length = 291 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--------------KNYAAG 62 + + V G +++ S+ + F +F Y Sbjct: 81 ANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPHEAIQASRLEYTGGQWP 140 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+V D + + V+LL S +C + +S L +T G++F ++ Sbjct: 141 PKGIEVIDPWHLPLYNTVILLLSGTCVTWAHHALLHNDRKGLISGLALTVALGVLFSTVQ 200 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 +YE+ I + S + ++FF G HG HVF G ++L V + + + G Sbjct: 201 VYEY---IHAPFDFKNSIYGATFFMATGFHGFHVFVGTVFLLVCLFRAIAGGFTPKQHFG 257 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 258 FEAAAWYWHFVDVVWLFLFFAIYIWG 283 >gi|163857013|ref|YP_001631311.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii DSM 12804] gi|163260741|emb|CAP43043.1| cytochrome o ubiquinol oxidase subunit III [Bordetella petrii] Length = 203 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 102/193 (52%), Positives = 130/193 (67%), Gaps = 3/193 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D T GFWIYLMSD L+F+V F T+AVL K A GP ++FD+S + V Sbjct: 14 HAGHH--DDGSKTVFGFWIYLMSDLLIFSVLFATFAVLSKATAGGPTGAELFDLSFVLVE 71 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T++LL+SS + AML R + + WL VT FG FI MEIYEF HLI+ A PQ Sbjct: 72 TMLLLISSFTFGMAMLNLHAGRAR-RVIGWLCVTFLFGAGFIGMEIYEFHHLITEGAGPQ 130 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 RSA+LS+FF L+G HGLHV FGL+W+ V+V + + GL S N RRL CLS+FWHFLD++W Sbjct: 131 RSAYLSAFFTLIGTHGLHVTFGLVWIAVMVDMVRRHGLDSVNVRRLSCLSLFWHFLDIVW 190 Query: 198 ICVFSFVYLMGVV 210 ICVF+FVYL+G + Sbjct: 191 ICVFTFVYLLGAL 203 >gi|332290094|ref|YP_004420946.1| cytochrome o ubiquinol oxidase subunit III [Gallibacterium anatis UMN179] gi|330432990|gb|AEC18049.1| cytochrome o ubiquinol oxidase subunit III [Gallibacterium anatis UMN179] Length = 202 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 94/194 (48%), Positives = 124/194 (63%), Gaps = 3/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 V GFWIYLMSD ++F+ F TY VL A P+ D+F++ + V Sbjct: 11 VHQGHHDTGPIK--VFGFWIYLMSDLILFSCLFATYIVLLPGTAGAPSGKDIFELPYVLV 68 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 T +LL SS++ FA+LA + + WL+VT FG F+ MEI EF HLI+ P Sbjct: 69 ETFLLLFSSITYGFAVLAMNRNNAK-QVLLWLVVTFLFGAAFVGMEINEFHHLIAQGVGP 127 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 RS FLS FF LVG HGLHV GLIW+ V++IQ++ +GL + N+ RL+CLS+FWHFLD++ Sbjct: 128 DRSGFLSGFFTLVGTHGLHVTAGLIWMVVMMIQVVTRGLSAVNRTRLMCLSLFWHFLDIV 187 Query: 197 WICVFSFVYLMGVV 210 WICVFS VYLMGV+ Sbjct: 188 WICVFSVVYLMGVL 201 >gi|294627030|ref|ZP_06705620.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598692|gb|EFF42839.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 208 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 28 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVNGPTAKELFDLKFVLVETFLLLFSSLSF 87 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 88 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTL 146 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 147 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 206 Query: 209 VV 210 + Sbjct: 207 AL 208 >gi|209886946|ref|YP_002290798.1| cytochrome c oxidase subunit III [Daboia russellii] gi|194395450|gb|ACF60286.1| cytochrome c oxidase subunit III [Daboia russellii] Length = 261 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF T + P I + Sbjct: 66 TYQGHHTMGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGISPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + LL+T G+ F +++ E+ Sbjct: 126 PMDVPLLNTAVLLSSGATITWSHHTMMKGNKKEATYALLITIILGIYFTALQVSEYMD-- 183 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + +I+++K + + +W Sbjct: 184 -TPFTISDSVYGSLFFVATGFHGLHVMIGTSFLLICLIRLIKYHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDVVWLFLYISVYWWG 260 >gi|76780586|emb|CAD92023.1| cytochrome oxidase subunit 3 [Xeronema callistemon] Length = 265 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSEAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|170701548|ref|ZP_02892498.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria IOP40-10] gi|170133542|gb|EDT01920.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia ambifaria IOP40-10] Length = 202 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 131/195 (67%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQHAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLAWLAVTFVLGAAFLAMELREFSHLIADGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVLRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|239906127|ref|YP_002952866.1| cytochrome o ubiquinol oxidase subunit III [Desulfovibrio magneticus RS-1] gi|239795991|dbj|BAH74980.1| cytochrome o ubiquinol oxidase subunit III [Desulfovibrio magneticus RS-1] Length = 210 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 1/210 (0%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA 60 M+ + P S + GFW+YLMSD ++F+ F TY V+ NYA Sbjct: 1 MTTAQTAHLPGAPGHEAHGGNGSHDMGEIQAFGFWLYLMSDLIVFSALFATYVVMAHNYA 60 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 GP P D+F++ + V T++LL SS + AM+A L L+ G+ F++ Sbjct: 61 GGPTPKDLFELPAVLVETMLLLTSSAAYGLAMVAMHKGDLRS-VRLGLVAAFALGLGFLV 119 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 ME+ EF H I + A P RS FLS+FF LVG HGLHV FGL+W+ V++ Q+ KGL + + Sbjct: 120 MELAEFHHFIGIGAGPDRSGFLSAFFTLVGTHGLHVTFGLLWIVVMLAQLASKGLTAPVK 179 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 RL L MFWHFLD++WI VF+ VYL+GVV Sbjct: 180 GRLTRLGMFWHFLDIVWIGVFTVVYLLGVV 209 >gi|76780584|emb|CAD92022.1| cytochrome oxidase subunit 3 [Eriospermum flagelliforme] Length = 265 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSEAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|32490898|ref|NP_871152.1| hypothetical protein WGLp149 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166104|dbj|BAC24295.1| cyoC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 205 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 ES LGFW+YLMSDC++FA F TY VL N A GP+ ++F+I +F+ T Sbjct: 14 HNNESNNHEKTKILGFWVYLMSDCILFATLFATYFVLKDNVANGPSGKEIFEIPLVFLET 73 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 I+LL SS++CS A + KT WL +T G+IFI +EI EF LI P R Sbjct: 74 IILLSSSMTCSIASFSIKKNN-KIKTNIWLFITVILGIIFINIEISEFYSLICKNYGPDR 132 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAFLS FF +VG HG+HV G+IW+ V++IQI G N+ RL LS+FW+FL++IWI Sbjct: 133 SAFLSIFFTIVGTHGVHVISGIIWMIVIMIQIYFYGCDKINKIRLKLLSLFWYFLEIIWI 192 Query: 199 CVFSFVYLMGVV 210 VF+ +YL+G++ Sbjct: 193 FVFNVIYLLGII 204 >gi|91775646|ref|YP_545402.1| cytochrome c oxidase, subunit III [Methylobacillus flagellatus KT] gi|91709633|gb|ABE49561.1| cytochrome bo3 quinol oxidase subunit 3 [Methylobacillus flagellatus KT] Length = 205 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 125/179 (69%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLM+D ++FA F TYAVL ++A GP D+F++ + + T +LL SS++ FA Sbjct: 28 FGFWIYLMTDLILFATLFATYAVLSTSFAGGPTGKDIFELDYVLIETFLLLFSSITYGFA 87 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+A K ++WL +T FG+ FI+ME+ EF HLI P RSAFLS+FF LVG Sbjct: 88 MIA-QHKGNKQAVLNWLAITFLFGLGFIVMEVNEFHHLIHQGFGPDRSAFLSAFFTLVGT 146 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GLIW+ VL+ QI KGL N RL+CLS+FWHFLD++WICVF+ VYLMGV+ Sbjct: 147 HGLHVTCGLIWMAVLMAQIWTKGLTETNNTRLMCLSLFWHFLDIVWICVFTVVYLMGVL 205 >gi|134296074|ref|YP_001119809.1| cytochrome c oxidase subunit III [Burkholderia vietnamiensis G4] gi|134139231|gb|ABO54974.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia vietnamiensis G4] Length = 202 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 128/195 (65%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG A GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQTAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA K+ + WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLA-GYKQRRGALLGWLAVTFVLGAAFLAMELREFSHLIADGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVLRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|209886960|ref|YP_002290824.1| cytochrome c oxidase subunit III [Bungarus fasciatus] gi|170774100|gb|ACB36671.1| cytochrome c oxidase subunit III [Bungarus fasciatus] Length = 261 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G +++ S+ L F FF + P I+ + Sbjct: 68 QGHHTEGVQKNMRYGMILFITSEVLFFLGFFWALYHVSLVPTPELGAEWPPTGINPLNPM 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LLSS + + + L++T G+ F +++ E+ Sbjct: 128 EVPLLNTAVLLSSGATITWSHHTMMNGNKKEATYALMITIMLGIYFTALQLSEYK---ET 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S FF G HG HV G +L + +I+++K + + +WHF Sbjct: 185 PFTISDSVYGSLFFVTTGFHGFHVMIGTSFLLICLIRLIKHHFTTTHHFGYEAAIWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ VY G Sbjct: 245 VDVVWLFLYISVYWWG 260 >gi|107122079|ref|YP_626373.1| cytochrome c oxidase subunit III [Elephas maximus] gi|93204562|sp|Q2I3G8|COX3_ELEMA RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|83415397|gb|ABC17897.1| cytochrome c oxidase subunit III [Elephas maximus] gi|148283470|gb|ABQ57317.1| cytochrome c oxidase subunit III [Elephas maximus] Length = 261 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + + + G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPIVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGSRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLICFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|118196971|emb|CAL69863.1| cytochrome oxidase subunit 3 [Pantherophis guttatus guttatus] Length = 261 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGITPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + + +LLSS + + ++ L++T G+ F ++ E+ Sbjct: 126 PTEVPLLNTAVLLSSGATITWSHHTMMSGNKKESTYALIITIMLGIYFTALQASEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + +I+++K + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTTFLMICMIRLMKHHFTITHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|85373377|ref|YP_457439.1| cytochrome C oxidase subunit III [Erythrobacter litoralis HTCC2594] gi|84786460|gb|ABC62642.1| cytochrome C oxidase subunit III [Erythrobacter litoralis HTCC2594] Length = 287 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 75/216 (34%), Gaps = 27/216 (12%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAA--------------- 61 + V G +++ S+ + F +F + A Sbjct: 68 AHRGDHTPVVQLHMRYGMILFIASEVMFFVGWFWAFFDFALFPAPIRELSDNVWENLIGQ 127 Query: 62 ---------GPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTA 112 P I+V D + + ++LL S + + L T Sbjct: 128 EGAAALATFPPEGIEVLDPFSLPLLNTLILLCSGTTVTWAHHALLHGDRDGLKKGLWATV 187 Query: 113 FFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK 172 G +F ++ YE+ + + S+F+ G HG HV G I+L V +++ K Sbjct: 188 ALGALFTAIQAYEYG---LAPFGFGGNTYSSAFYMATGFHGFHVLVGTIFLIVCLVRAYK 244 Query: 173 KGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F VY+ G Sbjct: 245 GHFTPRQHFGFEAAAWYWHFVDVVWLFLFVAVYIWG 280 >gi|1169061|sp|P09138|COX3_MAIZE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|13912|emb|CAA31221.1| unnamed protein product [Zea mays] Length = 265 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + F +FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMSFFLFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+F G HG HV G ++L V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFLLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++ + F +Y G Sbjct: 247 FVDVVRLFPFVSIYWWG 263 >gi|197104012|ref|YP_002129389.1| cytochrome c oxidase, subunit III [Phenylobacterium zucineum HLK1] gi|196477432|gb|ACG76960.1| cytochrome c oxidase, subunit III [Phenylobacterium zucineum HLK1] Length = 289 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 23/213 (10%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVL---------------GKNYAA 61 + V G G +++ S+ + F +F + + +A Sbjct: 72 ANAGDHTPVVSIGLRYGMILFIASEVMFFVAWFWMFFEMALFNDVRAASSIEEVRNAWAT 131 Query: 62 GPAP--IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFI 119 P V V+T++LLLS + ++A A + L++T G +F Sbjct: 132 WPPQGVETVPAWELPLVNTLILLLSGTTVTWAHHALQ-QGDRKGAKMGLILTVILGALFT 190 Query: 120 IMEIYEFAHLISMEAVP-----QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG 174 ++ YE+ H++S + + S+FF G HG HV G I+L V +I++++ G Sbjct: 191 AIQAYEYHHILSHQYFFSEEAANSGLYGSTFFMATGFHGFHVLIGTIFLLVCLIRLMRGG 250 Query: 175 LISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207 + +WHF+D++W+ +F+F+Y++ Sbjct: 251 FTPQKHFGFEAAAWYWHFVDVVWLFLFAFIYVV 283 >gi|310815262|ref|YP_003963226.1| cytochrome c oxidase, subunit III [Ketogulonicigenium vulgare Y25] gi|308753997|gb|ADO41926.1| cytochrome c oxidase, subunit III [Ketogulonicigenium vulgare Y25] Length = 290 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 13/206 (6%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------------AAGPA 64 + + + V G F +++ S+ ++FA FF + + PA Sbjct: 79 ANEGEHTPVVQIGVRYSFILFITSEVMVFATFFWAFFKYALHPMAVDGTFPLNYGVWPPA 138 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 ++ + + +LLLSS + + + KT L + G IF + + Y Sbjct: 139 GVETLSPWHLPLVNTILLLSSGAAATWAHHAIVHGDRKKTAIGLAIAIGLGWIFTLCQAY 198 Query: 125 EFAHLISME-AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 E+ ++ E + + + FF GLHG HV G I+L V +I+IL+ + + Sbjct: 199 EYYEIVHTEAFSFSGNVYGAVFFMATGLHGAHVLIGSIFLLVCLIRILRGAMSAKQHVGF 258 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMGV 209 + +WHF+D++W+ +F VY+ G Sbjct: 259 EMAAWYWHFVDVVWLFLFVAVYIWGA 284 >gi|37496454|emb|CAD21992.1| cytochrome oxidase subunit III [Elephas maximus] Length = 261 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + + + G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPIVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGSRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L + I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLICFIRQLKFHFTSHHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|291612239|ref|YP_003540675.1| cytochrome c oxidase subunit III [Hypsiglena jani texana] gi|189164551|gb|ACD77481.1| cytochrome c oxidase subunit III [Hypsiglena jani texana] Length = 261 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMTTIMLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLMVCMLRLINHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|289065040|ref|YP_003433851.1| cytochrome c oxidase subunit 3 [Oryza rufipogon] gi|74100175|gb|AAZ99338.1| cytochrome c oxidase subunit 3 [Oryza sativa Japonica Group] gi|74100229|gb|AAZ99391.1| cytochrome c oxidase subunit 3 [Oryza sativa Japonica Group] gi|285026122|dbj|BAI67955.1| cytochrome c oxidase subunit 3 [Oryza rufipogon] gi|285026151|dbj|BAI67983.1| cytochrome c oxidase subunit 3 [Oryza sativa Indica Group] Length = 280 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 86 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 145 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 146 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 201 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 202 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 261 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 262 FVDVVRLFPFVSIYWWGGI 280 >gi|226314760|ref|YP_002774656.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599] gi|226097710|dbj|BAH46152.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599] Length = 198 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 82/193 (42%), Positives = 118/193 (61%), Gaps = 1/193 (0%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 + FWIYLM+D ++FA F TY VL + GP P D+F +SGI+ Sbjct: 6 AGHHDHHPDQEELRTFAFWIYLMTDVILFATLFATYIVLQGSTDGGPGPKDLFQMSGIYA 65 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 ST +LL SS + A+LA K ++WL VT F G F+ +EI EF H++S A Sbjct: 66 STFILLTSSFTSGLAILA-MNKGNRLALMNWLGVTVFLGASFLFLEINEFIHMVSEGATI 124 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 SAFL++F+ LVG HGLHV G+ W+ ++++QI K G+ +R++ +S+FWHFLD++ Sbjct: 125 GTSAFLTAFYTLVGTHGLHVTLGMGWMIIVIMQIAKHGITPVTKRKVNIISLFWHFLDVV 184 Query: 197 WICVFSFVYLMGV 209 WI VF+ VY+MGV Sbjct: 185 WIFVFTIVYVMGV 197 >gi|17224968|gb|AAL37190.1|AF321090_2 cytochrome o ubiquinol oxidase C [Pseudomonas putida] Length = 201 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 93/188 (49%), Positives = 121/188 (64%), Gaps = 1/188 (0%) Query: 23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82 + T GFW+YLM+DC++FA F YAVL N A GP+ ++F++ + T +LL Sbjct: 15 THDSGKMTVYGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHEIFELPYVLGETALLL 74 Query: 83 LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142 SS++ FAMLA K + WL +T G FI MEI EF LIS P RS FL Sbjct: 75 FSSITYGFAMLAL-YKGKKQAVLGWLFMTFLLGAGFIAMEINEFHLLISEGFGPSRSGFL 133 Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202 S+FF LVG HGLHV GLIW+ +++ Q+ K GL S N+ RL CLS+FWHFLD++WICVF+ Sbjct: 134 SAFFTLVGTHGLHVSAGLIWMGIMMYQVNKHGLTSTNKTRLSCLSLFWHFLDVVWICVFT 193 Query: 203 FVYLMGVV 210 VYLMG + Sbjct: 194 VVYLMGTL 201 >gi|296533147|ref|ZP_06895776.1| cytochrome c oxidase, subunit III [Roseomonas cervicalis ATCC 49957] gi|296266519|gb|EFH12515.1| cytochrome c oxidase, subunit III [Roseomonas cervicalis ATCC 49957] Length = 212 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWIYLMSDC++FA F TYAVL A GP +FD+ +F T++LL SS++ Sbjct: 35 LGFWIYLMSDCILFAGIFATYAVLSHATAGGPDGHALFDLPYVFTETMILLASSITYGMG 94 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 MLA+ R +SWL +TA G+ F+ ME+ EF H+I+ A P RSAFLS+FF LVG Sbjct: 95 MLAAVRGRRRVA-LSWLGLTALLGLAFLAMELNEFHHMIAEGAGPDRSAFLSAFFTLVGT 153 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+WL VL+ Q+ KGL N RL CLSMFWHFLD+IWI VF+ VYL+GV+ Sbjct: 154 HGLHVTAGLLWLGVLMAQVAVKGLSDTNLTRLNCLSMFWHFLDVIWIGVFTIVYLLGVL 212 >gi|229086506|ref|ZP_04218678.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-44] gi|228696823|gb|EEL49636.1| Cytochrome c oxidase subunit 3 [Bacillus cereus Rock3-44] Length = 207 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 105/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + ++ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKQMQLWLIVTVLLGLGFLGFEIYEFYHYTHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL+W+ LV + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLLWILTLVFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|83309078|ref|YP_423955.1| cytochrome c oxidase subunit III [Lipotes vexillifer] gi|55274423|gb|AAV49117.1| cytochrome c oxidase subunit III [Lipotes vexillifer] Length = 261 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G Sbjct: 68 QGHHTPTVQKGLRYGMILFIVSEALFFTGFFWAFYHSSLAPTPELGGTWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + +T+ L +T G+ F ++++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGY-RKQTLQALFITIALGLYFTLLQVSEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G I+L V ++ +K S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSIFLIVCFMRQMKFHFTSSHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|307154506|ref|YP_003889890.1| cytochrome-c oxidase [Cyanothece sp. PCC 7822] gi|306984734|gb|ADN16615.1| Cytochrome-c oxidase [Cyanothece sp. PCC 7822] Length = 207 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 6/199 (3%) Query: 11 NFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA-PIDVF 69 + D G ++L+++ ++F F + + P Sbjct: 12 ALDYHQSAEAHHHGGHPDHRMFGLVLFLIAEGMIFFGLFAAFVIYSSILPQWPPEGTPEL 71 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T +L+ SS A W +TA G++F++ + YE+ H Sbjct: 72 ELLLPGINTFILISSSFVMHLGQNAIKKNDEK-GLRLWFGITAIMGVLFLVGQGYEYTH- 129 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQIL-KKGLISGNQRRLICLSM 188 + F SSF+AL G HGLHV FGL+ + ++ + + S + + + Sbjct: 130 --TGFGLTTNLFTSSFYALTGFHGLHVTFGLLLILAVLWRSRSQGHYSSQSHFGVEAAEL 187 Query: 189 FWHFLDLIWICVFSFVYLM 207 +WHF+D+IWI +F VYL+ Sbjct: 188 YWHFVDVIWIILFILVYLL 206 >gi|115352156|ref|YP_773995.1| cytochrome c oxidase subunit III [Burkholderia ambifaria AMMD] gi|115282144|gb|ABI87661.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia ambifaria AMMD] Length = 202 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 131/195 (67%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQHAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLAWLAVTFVLGAAFLAMELREFSHLIADGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVMRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|21242013|ref|NP_641595.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas axonopodis pv. citri str. 306] gi|21107411|gb|AAM36131.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas axonopodis pv. citri str. 306] Length = 208 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 28 NTVFGFWVYLMSDCLLFACLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 87 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ WL VTA G+ F+ ME++EF HLI A P RSAFLS+FF L Sbjct: 88 GFAMIAAHKRKM-GGLYGWLAVTALLGIGFLCMEVWEFNHLIHEGAGPGRSAFLSAFFTL 146 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 147 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 206 Query: 209 VV 210 + Sbjct: 207 AL 208 >gi|222838749|ref|YP_002586981.1| cytochrome c oxidase subunit III [Stenella coeruleoalba] gi|222839867|ref|YP_002587092.1| cytochrome c oxidase subunit III [Delphinus capensis] gi|223471640|ref|YP_002586887.1| cytochrome c oxidase subunit III [Stenella attenuata] gi|223471654|ref|YP_002587066.1| cytochrome c oxidase subunit III [Tursiops truncatus] gi|170026976|gb|ACB06029.1| cytochrome c oxidase subunit III [Tursiops truncatus] gi|170026990|gb|ACB06042.1| cytochrome c oxidase subunit III [Delphinus capensis] gi|170027018|gb|ACB06068.1| cytochrome c oxidase subunit III [Stenella attenuata] gi|170027032|gb|ACB06081.1| cytochrome c oxidase subunit III [Stenella coeruleoalba] gi|219560194|gb|ACL27320.1| cytochrome c oxidase subunit III [Delphinus delphis] gi|219560222|gb|ACL27346.1| cytochrome c oxidase subunit III [Tursiops truncatus] Length = 261 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|222839838|ref|YP_002587053.1| cytochrome c oxidase subunit III [Tursiops aduncus] gi|170026962|gb|ACB06016.1| cytochrome c oxidase subunit III [Tursiops aduncus] Length = 261 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRKH-MLQALFITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|190588350|gb|ACE79206.1| cytochrome c oxidase subunit 3 [Bambusa oldhamii] gi|190588352|gb|ACE79207.1| cytochrome c oxidase subunit 3 [Phyllostachys edulis] Length = 265 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKKHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++ + F +Y G Sbjct: 247 FVDVVRLFPFVSIYWWG 263 >gi|83943954|ref|ZP_00956411.1| cytochrome c oxidase, subunit III [Sulfitobacter sp. EE-36] gi|83954527|ref|ZP_00963238.1| cytochrome c oxidase, subunit III [Sulfitobacter sp. NAS-14.1] gi|83840811|gb|EAP79982.1| cytochrome c oxidase, subunit III [Sulfitobacter sp. NAS-14.1] gi|83845201|gb|EAP83081.1| cytochrome c oxidase, subunit III [Sulfitobacter sp. EE-36] Length = 267 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 9/200 (4%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------VLGKNYAAGPAPIDVF 69 + V G GF +++MS+ + F +F T+ + P I V Sbjct: 67 HVGDHTNVVRIGLRYGFILFIMSEVMFFVAWFWTFFKEALYPMDEFPGSTYVQPDIIPVD 126 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++T++LLLS + ++A A + ++ L + GM+F + YE+ L Sbjct: 127 AFHLPLINTLILLLSGCAVTWAHHALVHENNRKDLIAGLSIAIVLGMLFTAFQAYEYYEL 186 Query: 130 I-SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSM 188 + + F SSFF G HG HV G I+L V + + +K + Sbjct: 187 LAHDDWTFGGDLFFSSFFMATGFHGFHVVIGTIFLAVCLFRAMKGHFTQEQHVGFEAAAW 246 Query: 189 FWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ +F VY+ G Sbjct: 247 YWHFVDVVWLFLFFAVYMWG 266 >gi|319778051|ref|YP_004134481.1| cytochrome c oxidase subunit iii [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171770|gb|ADV15307.1| cytochrome c oxidase subunit III [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 228 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWI+L+SD ++F+ FF YAVL K A GP D+F+ + + V T +LL SS + A Sbjct: 50 YGFWIFLLSDIIIFSAFFAAYAVLAKATAGGPTGKDLFEPTRVAVQTGLLLTSSFTGGLA 109 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 LA+ + + T +WLLVT G F+ +E+ EFA +I +A P RSAFLS+FFALVG Sbjct: 110 TLATHRRSM-AATQAWLLVTGLLGAAFLFLEVQEFAAMIGEQAGPSRSAFLSAFFALVGC 168 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 HG HV GL+WL ++ Q+ KG S RRL C +FWH LD+IW+ +F+ VYL+G Sbjct: 169 HGTHVGLGLLWLGTMMAQLWVKGFRSDILRRLHCFGLFWHALDIIWVAIFTLVYLLGA 226 >gi|299065535|emb|CBJ36706.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum CMR15] Length = 211 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 34 FGFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIETGILLVSSITYGMV 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 94 MVGLQAGR-KDQVLLWLGITFLLGAAFVGMEINEFHHLIAEGAGPNRSAFLSSFFTLVGT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 153 HGLHVASGLLWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211 >gi|285017725|ref|YP_003375436.1| cytochrome o ubiquinol oxidase subunit III protein [Xanthomonas albilineans GPE PC73] gi|283472943|emb|CBA15448.1| probable cytochrome o ubiquinol oxidase subunit III protein [Xanthomonas albilineans] Length = 206 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 122/181 (67%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSL Sbjct: 27 TVFGFWVYLMSDCLIFAGLFATYAVLAGATVDGPTAKELFDLKFVLVETFLLLFSSLGFG 86 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 AM+A+ + + +WL VTA G+ F+ ME+YEF HLI A P RSAFLS+FF LV Sbjct: 87 LAMIAAHRRSM-GGLYAWLAVTAALGLGFLGMELYEFHHLIHEGAGPGRSAFLSAFFTLV 145 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 G HGLHV GL+W+ VLVIQI + GL N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 146 GTHGLHVASGLLWMTVLVIQIARNGLTPRNSTRLACLSLFWHFLDVIWIGVFTIVYLLGA 205 Query: 210 V 210 + Sbjct: 206 L 206 >gi|152976356|ref|YP_001375873.1| cytochrome c oxidase subunit III [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025108|gb|ABS22878.1| cytochrome c oxidase subunit III [Bacillus cytotoxicus NVH 391-98] Length = 207 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 105/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP+ ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPSSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFHFKQMQLWLLVTVLLGLGFLGFEIYEFYHYAHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|229016030|ref|ZP_04172986.1| Quinol oxidase subunit 3 [Bacillus cereus AH1273] gi|229022249|ref|ZP_04178794.1| Quinol oxidase subunit 3 [Bacillus cereus AH1272] gi|228739052|gb|EEL89503.1| Quinol oxidase subunit 3 [Bacillus cereus AH1272] gi|228745263|gb|EEL95309.1| Quinol oxidase subunit 3 [Bacillus cereus AH1273] Length = 200 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 110/179 (61%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + ++W ++T G F+ EI EF + A Q SAFLS+FF L+G Sbjct: 82 IHEMRKQNQK-GMLAWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|88766332|ref|NP_009285.2| cytochrome c oxidase subunit III [Loxodonta africana] gi|93204563|sp|Q2I3F5|COX3_LOXAF RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|83415411|gb|ABC17910.1| cytochrome c oxidase subunit III [Loxodonta africana] gi|218783286|dbj|BAH03664.1| cytochrome c oxidase subunit III [Loxodonta africana] Length = 261 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V + G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|302186054|ref|ZP_07262727.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. syringae 642] Length = 210 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ Sbjct: 31 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 90 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T G FI ME+YEF HLI P RS FLS+FFALV Sbjct: 91 FAMLAL-YKGNKSQVLGWLALTFLCGAAFIGMEVYEFHHLIHEGYGPSRSGFLSAFFALV 149 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 GLHG+HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG Sbjct: 150 GLHGVHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 209 Query: 210 V 210 + Sbjct: 210 L 210 >gi|23008830|ref|ZP_00050109.1| COG1845: Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Magnetospirillum magnetotacticum MS-1] Length = 285 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 17/208 (8%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-------------- 60 + V G +++ S+ + F +F Y A Sbjct: 73 HEANSGDHTRVVQLHHRYGMIMFIASEVMFFVAWFWAYFEAALYTADPIQAQRVEFTGGV 132 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 P I+ FD + + ++LL+S + + L +T G IF Sbjct: 133 WPPKGIEAFDPWHLPLLNTLILLTSGTTVTWAHHALLHGDRKGLKMGLWLTIILGAIFTA 192 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 + YE+AH S + S+FF G HG HV G I+L V +++ K Sbjct: 193 CQAYEYAH---AHFGFAGSIYSSTFFMATGFHGAHVIIGTIFLAVCLLRAYKGDFTPKQH 249 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F+ +Y+ G Sbjct: 250 LGFEFAAWYWHFVDVVWLFLFAAIYVWG 277 >gi|291612449|ref|YP_003541005.1| cytochrome c oxidase subunit III [Hypsiglena torquata] gi|189164537|gb|ACD77468.1| cytochrome c oxidase subunit III [Hypsiglena torquata] Length = 261 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMNGNKKEATYALMATIMLGIYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLTVCILRLIKHHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|76780572|emb|CAD92016.1| cytochrome oxidase subunit 3 [Borya septentrionalis] Length = 265 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAYYAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|74310593|ref|YP_313726.1| cytochrome c oxidase subunit III [Cylindrophis ruffus] gi|73760235|dbj|BAE20033.1| cytochrome oxidase subunit 3 [Cylindrophis ruffus] Length = 262 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 78/198 (39%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK------NYAAGPAPIDVFD 70 + G ++++S+ L F FF T + P I + Sbjct: 67 TYQGHHTKGVQKNLRYGMMLFIVSEVLFFLGFFWTLYHVSLFPTPELGAEWPPTGITPLN 126 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K ++ L++T G+ F +++ E+ Sbjct: 127 PLEVPLLNTAVLLSSGATITWSHHTMMKGNKTESTYALMITIALGIYFTALQLSEYM--- 183 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V + ++++ + + +W Sbjct: 184 ETPFTISDSVYGSIFFVATGFHGLHVMIGTTFLIVCLTRLIQYHFTTTHHFGYEAAIWYW 243 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F VY G Sbjct: 244 HFVDVVWLFLFVSVYWWG 261 >gi|237642061|ref|YP_002894723.1| cytochrome c oxidase subunit III [Moschus berezovskii] gi|153799696|gb|ABS50576.1| cytochrome c oxidase subunit III [Moschus berezovskii] Length = 261 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G ++++S+ L FF + P I + Sbjct: 68 QGHHTPTVQKGLRYGMILFIISEVLFLTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGNRNHMLQALFITIALGVYFTLLQASEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V + LK S + + +WHF Sbjct: 185 PFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYVSIYWWG 260 >gi|326370381|gb|ADZ56212.1| cytochrome c oxidase subunit III [Orcaella heinsohni] Length = 261 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F VFF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTVFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|194289182|ref|YP_002005089.1| cytochrome o ubiquinol oxidase subunit iii [Cupriavidus taiwanensis LMG 19424] gi|193223017|emb|CAQ69022.1| cytochrome o ubiquinol oxidase, subunit III [Cupriavidus taiwanensis LMG 19424] Length = 214 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 1/180 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFWIYLMSDC++FA F +AVL A GP+ ++F+++ + V T +LL SS++ Sbjct: 34 NTVYGFWIYLMSDCIIFAGLFAAFAVLRGELAGGPSAKELFELNYVLVETFILLFSSITY 93 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 AM++ + L H +WL +T G+ F+ MEI EF HLI+ A P RSAFLSSFF L Sbjct: 94 GMAMISLQNRSLKH-VQTWLGITFLLGLAFMAMEINEFHHLIAEGAGPGRSAFLSSFFTL 152 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV G++W+ VL+ Q+ KKG+ +RL+CLS+FWHFLD++WI VF+ VYLMG Sbjct: 153 VGTHGLHVASGMLWMIVLMWQLGKKGITPTLSKRLMCLSLFWHFLDVVWIGVFTVVYLMG 212 >gi|84501693|ref|ZP_00999865.1| Cytochrome c oxidase, aa3-type, subunit III [Oceanicola batsensis HTCC2597] gi|84390314|gb|EAQ02873.1| Cytochrome c oxidase, aa3-type, subunit III [Oceanicola batsensis HTCC2597] Length = 266 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 14/202 (6%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA----------VLGKNYAAGPAPID 67 K + V G GF +++MS+ + F+ +F T+ G + PA I+ Sbjct: 67 KAGDHTPVVMIGLRYGFILFIMSEVMFFSAWFWTFFKHAMYPMGPESPGVDGQWPPAGIE 126 Query: 68 VFDIS-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEF 126 FD ++T++LL S + ++A A + L++ G++F + + YE+ Sbjct: 127 TFDPWHLPLINTLILLCSGAAATWAHHALVHEENRQDMKWGLMLAIGLGIVFTLFQAYEY 186 Query: 127 AHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICL 186 +H + + ++FF G HG HV G I+LFV ++++ + + Sbjct: 187 SH---AAFGFSGNIYGATFFMATGFHGAHVIIGTIFLFVCLLRVYAGDFTAKSHVGFEMA 243 Query: 187 SMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F+ VY+ G Sbjct: 244 AWYWHFVDVVWLFLFAAVYIWG 265 >gi|77460867|ref|YP_350374.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens Pf0-1] gi|77384870|gb|ABA76383.1| cytochrome bo3 quinol oxidase subunit 3 [Pseudomonas fluorescens Pf0-1] Length = 208 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 93/184 (50%), Positives = 122/184 (66%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 + T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS+ Sbjct: 26 GEMTVYGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSI 85 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + FAMLA K + + WL +T G FI MEI EF LIS P RS FLS+FF Sbjct: 86 TYGFAMLAL-YKGKKQQVLGWLFMTFLLGAGFIAMEINEFHLLISEGFGPSRSGFLSAFF 144 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 LVG HGLHV GLIW+ +++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYL Sbjct: 145 TLVGTHGLHVSAGLIWMGIMMYQVNKHGLTATNKTRLSCLSLFWHFLDVVWICVFTVVYL 204 Query: 207 MGVV 210 MG + Sbjct: 205 MGTL 208 >gi|228992678|ref|ZP_04152604.1| Cytochrome c oxidase subunit 3 [Bacillus pseudomycoides DSM 12442] gi|228998722|ref|ZP_04158309.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock3-17] gi|229006224|ref|ZP_04163910.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock1-4] gi|228755065|gb|EEM04424.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock1-4] gi|228761190|gb|EEM10149.1| Cytochrome c oxidase subunit 3 [Bacillus mycoides Rock3-17] gi|228767010|gb|EEM15647.1| Cytochrome c oxidase subunit 3 [Bacillus pseudomycoides DSM 12442] Length = 207 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 105/192 (54%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + GP ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGPTSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKQMQLWLLVTVLLGLGFLGFEIYEFYHYTHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL+W+ LV + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLLWILTLVFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|57282277|emb|CAD32367.1| cytochrome oxidase subunit 3 [Lapageria rosea] Length = 265 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|262042466|ref|ZP_06015625.1| quinol oxidase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040170|gb|EEW41282.1| quinol oxidase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 181 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 98/179 (54%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++FA F TYAVL A GP D+F++ + V T +LL SS++ A Sbjct: 4 FGFWIYLMSDCIIFATLFATYAVLVNGTAGGPTGKDIFELPFVLVETALLLFSSITYGMA 63 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A K + VSWL +T FG FI MEIYEF HLI RS FLS+FFALVG Sbjct: 64 AIA-MYKNNKSQVVSWLALTWLFGAGFIGMEIYEFHHLIMEGFGLDRSGFLSAFFALVGT 122 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GLIW+ VL+ Q+ ++GL S N+ R++CLS+FWHFLD++WICVFS VYLMG + Sbjct: 123 HGLHVTSGLIWMAVLMFQVSRRGLTSTNRTRILCLSLFWHFLDVVWICVFSVVYLMGAM 181 >gi|317129344|ref|YP_004095626.1| cytochrome-c oxidase [Bacillus cellulosilyticus DSM 2522] gi|315474292|gb|ADU30895.1| Cytochrome-c oxidase [Bacillus cellulosilyticus DSM 2522] Length = 205 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 1/185 (0%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ ++GFW +L + ++FA F TY L GP P D+F + +F+ T++LL Sbjct: 19 TLEGRNKFMGFWFFLGGETVLFASLFGTYLGLRGGTMNGPGPSDLFHLDLVFIMTMILLT 78 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ FA+++ ++W+ VT G+ F+ MEIYEF SAF S Sbjct: 79 SSLTSVFAVISMKKGNFK-GLLAWMSVTVLLGLAFLGMEIYEFYDYYHKGLGYSTSAFAS 137 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 SF+ LVG HG HV FG+ W+ L+I+ K GL N + ++WHF+D++W+ +FS Sbjct: 138 SFYTLVGTHGAHVAFGIGWITTLIIRYRKSGLTLTNAPKFYTAVLYWHFIDVVWVFIFSV 197 Query: 204 VYLMG 208 VYLMG Sbjct: 198 VYLMG 202 >gi|222839612|ref|YP_002587007.1| cytochrome c oxidase subunit III [Pseudolabrus eoethinus] gi|170292922|gb|ACB12505.1| cytochrome c oxidase subunit 3 [Pseudolabrus eoethinus] Length = 261 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G G +++ S+ F F + P I D Sbjct: 68 QGHHTPPVQKGLRYGMILFITSEVFFFLGFSWAFYHSSLAPTPELGGCWPPTGITTLDPF 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LL+S S + + + L +T G F ++ E+ Sbjct: 128 EVPLLNTAVLLASGVTVTWAHHSIMEAARKEAIQSLALTILLGFYFTFLQGLEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 + S+FF G HGLHV G +L V +++ ++ S + + +WHF Sbjct: 185 PFTIADGVYGSTFFVATGFHGLHVIIGSSFLAVCLLRQIQYHFTSSHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ ++ +Y G Sbjct: 245 VDVVWLFLYISIYWWG 260 >gi|5852110|emb|CAA12144.1| cytochrome oxidase c subunit III [Loxodonta africana] Length = 262 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V + G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|57282279|emb|CAD32368.1| cytochrome oxidase subunit 3 [Rhipogonum elseyanum] Length = 265 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLSICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|8954365|ref|NP_059354.1| cytochrome c oxidase subunit 3 [Cyanidioschyzon merolae] gi|3927869|dbj|BAA34657.1| cytochrome c oxidase polypeptide III [Cyanidioschyzon merolae strain 10D] Length = 272 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 11/201 (5%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFD 70 + + + G G +++ S+ ++F FF + + P I +FD Sbjct: 76 TYEGSHTVLVQLGLRYGIVLFIFSEVMLFISFFWAFFHSSLSPGVELGMIWPPQGISIFD 135 Query: 71 -ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 F++TI+LLLS + ++A A ++ + ++F ++ YE+ Sbjct: 136 PCQVPFLNTIILLLSGCTVTWAHHAIIHGNRNQGILALVFT-ILLALLFTGLQFYEYKI- 193 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF GLHGLHV G ++L V ++++ + + + + + Sbjct: 194 --APFCLSDGIYGSTFFITTGLHGLHVIVGTLFLLVCLVRLYNYQITAQHHFGFEAAAWY 251 Query: 190 WHFLDLIWICVFSFVYLMGVV 210 WHF+D++W+ +F VY G + Sbjct: 252 WHFVDVVWLFLFVSVYWWGGI 272 >gi|57282281|emb|CAD32369.1| cytochrome oxidase subunit 3 [Smilax glauca] Length = 265 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|310644020|ref|YP_003948778.1| transmembrane cytochrome o ubiquinol oxidase (subunit iii) oxidoreductase protein [Paenibacillus polymyxa SC2] gi|309248970|gb|ADO58537.1| Probable transmembrane cytochrome O ubiquinol oxidase (Subunit III) oxidoreductase protein [Paenibacillus polymyxa SC2] Length = 202 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 78/184 (42%), Positives = 118/184 (64%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 + LGFWI+L++D ++F+ F T+ VL N A GP ++F+++G+ + T +LL SS Sbjct: 20 QELKMLGFWIFLVTDVILFSTLFATFVVLRNNTAGGPGGAELFNMTGVIIETFLLLTSSF 79 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + A+LA + +SWL+VTA G+ FI E+YEF ++ A SAFLS+FF Sbjct: 80 TSGLAVLAMNKGSMK-GLISWLIVTAILGLGFIGFEVYEFVEMVHEGANFGTSAFLSAFF 138 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 LVG HGLHV GL+W+ L+ Q+ K+GL + ++ LS++WHFLD +WI + + VYL Sbjct: 139 TLVGTHGLHVSLGLVWMIGLMFQLKKRGLTPETKGKVSALSLYWHFLDAVWIFLLTVVYL 198 Query: 207 MGVV 210 MGV+ Sbjct: 199 MGVM 202 >gi|229541705|ref|ZP_04430765.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus coagulans 36D1] gi|229326125|gb|EEN91800.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus coagulans 36D1] Length = 202 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 108/181 (59%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW++L ++ +FA F TY L A GP D+F++ G+ + T VLL SS +C Sbjct: 22 TIFGFWVFLAAEITLFATLFATYFTLQHQTAGGPVQQDIFELKGVLIETFVLLTSSFTCG 81 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 A+ + R + W +VT G+ F+ EI EF I A SAFLS+F+ L+ Sbjct: 82 IAIF-NMRNRNKGAMLGWFIVTLLLGLTFVGFEINEFVTYIHDGATLPTSAFLSAFYVLL 140 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 G HG HV G++W ++IQ++++GL R+ +S++WHFLD++WI +F+FVYL G+ Sbjct: 141 GTHGCHVSLGILWGISIIIQLIRRGLTPMTARKFFVVSIYWHFLDVVWIFIFTFVYLGGL 200 Query: 210 V 210 + Sbjct: 201 M 201 >gi|153837577|ref|ZP_01990244.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus AQ3810] gi|149749074|gb|EDM59885.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus AQ3810] Length = 200 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ Sbjct: 20 NKLFGFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITF 79 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F ++A + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 80 GFGIIAMKRND-VSGLKRWMLVTFALGLGFICMEVYEFHHLIKEGYGPQTSAFLSAFFTL 138 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMG Sbjct: 139 VGTHGLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMG 198 Query: 209 VV 210 V+ Sbjct: 199 VM 200 >gi|114767473|ref|ZP_01446256.1| Cytochrome c oxidase, subunit III [Pelagibaca bermudensis HTCC2601] gi|114540453|gb|EAU43535.1| Cytochrome c oxidase, subunit III [Roseovarius sp. HTCC2601] Length = 219 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 113/205 (55%), Positives = 135/205 (65%), Gaps = 1/205 (0%) Query: 3 RQKIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG 62 + + P K +++ T +GFWIYLMSDC++F F TYAVLG NYA G Sbjct: 13 VEPLADRPMHHAREAKPHEDAHAHSSPTPVGFWIYLMSDCVIFGALFATYAVLGGNYAGG 72 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 PAP D+F+ I V T +LL SS++ AML + K + T+ WL VTA FG FI ME Sbjct: 73 PAPKDLFEPGFIAVETALLLFSSVTFGLAMLRA-GKSDTNGTLMWLAVTALFGAGFIGME 131 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 IYEF HLI + A P RSAFLSSFFALVG HGLHV GLIWL L++QI GLI N +R Sbjct: 132 IYEFNHLIHLGAGPDRSAFLSSFFALVGTHGLHVTGGLIWLITLMVQIRMHGLIGPNMQR 191 Query: 183 LICLSMFWHFLDLIWICVFSFVYLM 207 L LSMFWHFLDL+WI VFSFVYL+ Sbjct: 192 LGTLSMFWHFLDLVWIGVFSFVYLV 216 >gi|156139672|gb|ABU50890.1| cytochrome c oxidase subunit 3 [Nepenthes sp. 'Kosobe'] Length = 252 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 11/193 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAGPAPID-----VFDI 71 + + V G GF ++++S+ + F F ++ L G + Sbjct: 64 EGHHTKVVQLGLRYGFILFIVSEVMFFFALFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 123 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T++LL S + ++A A + V L+ T ++F + E+ Sbjct: 124 EIPFLNTLILLSSGAAVTWAHHAILAGKEK-GAVYALVATVLLALVFTGFQGMEY---YQ 179 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 180 APFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYFGHLTKEHHVGFEAAAWYWH 239 Query: 192 FLDLIWICVFSFV 204 F+D++W+ +F + Sbjct: 240 FVDVVWLFLFVSI 252 >gi|6730478|pdb|1QLE|C Chain C, Cryo-Structure Of The Paracoccus Denitrificans Four-Subunit Cytochrome C Oxidase In The Completely Oxidized State Complexed With An Antibody Fv Fragment Length = 273 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 14/201 (6%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--VLGKNYA--------AGPAPIDV 68 + + V G GF +++MS+ + F +F + L P I Sbjct: 75 TGEHTPVVRIGLQYGFILFIMSEVMFFVAWFWAFIKNALYPMGPDSPIKDGVWPPEGIVT 134 Query: 69 FDIS-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 FD ++T++LLLS ++ ++A A + T++ L+V G+ F ++ YE++ Sbjct: 135 FDPWHLPLINTLILLLSGVAVTWAHHAFVLEGDRKTTINGLIVAVILGVCFTGLQAYEYS 194 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 H + + +F+ G HG HV G I+LFV +I++LK + + Sbjct: 195 H---AAFGLADTVYAGAFYMATGFHGAHVIIGTIFLFVCLIRLLKGQMTQKQHVGFEAAA 251 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ +F +Y+ G Sbjct: 252 WYWHFVDVVWLFLFVVIYIWG 272 >gi|300865035|ref|ZP_07109862.1| cytochrome c oxidase, subunit III [Oscillatoria sp. PCC 6506] gi|300336972|emb|CBN55012.1| cytochrome c oxidase, subunit III [Oscillatoria sp. PCC 6506] Length = 213 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 6/191 (3%) Query: 19 DKKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D ++ +H G +L S+ LMF FF Y +L P ++ ++ Sbjct: 24 DAAQNHEEHKDLRVFGLLTFLASESLMFGGFFAAYLLLRGATEVWPPEGTEVELLLPTIN 83 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 TI+L+ SS A + W VTA G+IF+ + YE+ +++ Sbjct: 84 TIILVSSSFVIHLGDTAVKKNDVK-GMRLWYAVTALMGIIFLGGQAYEY---LTLGYGLT 139 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILK-KGLISGNQRRLICLSMFWHFLDLI 196 + F + F+ + G HGLHV G+ + ++ + + + + ++WHF+D+I Sbjct: 140 ENVFANCFYLMTGFHGLHVLIGVCLILGVIWRSRREGHYSNVKHTGIEMAEIYWHFVDII 199 Query: 197 WICVFSFVYLM 207 WI +F+ +Y++ Sbjct: 200 WIILFTLLYIL 210 >gi|291612337|ref|YP_003540766.1| cytochrome c oxidase subunit III [Hypsiglena sp. DGM2008] gi|189164393|gb|ACD77335.1| cytochrome c oxidase subunit III [Hypsiglena sp. DGM2008] Length = 261 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGIIPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGIYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++K + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLMVCILRLIKHHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|260459334|ref|ZP_05807589.1| cytochrome c oxidase subunit III [Mesorhizobium opportunistum WSM2075] gi|259034888|gb|EEW36144.1| cytochrome c oxidase subunit III [Mesorhizobium opportunistum WSM2075] Length = 228 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWI+L+SD ++F+ FF YAVL K A GP ++F+ + + V T +LL SS + A Sbjct: 50 YGFWIFLLSDIIIFSAFFAAYAVLAKATAGGPTGKELFEPTRVAVQTGLLLTSSFTGGLA 109 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 LA +R + T +WLLVT G F+ +E+ EFA +I +A P RSAFLS+FFALVG Sbjct: 110 TLA-TDRRSMAATQAWLLVTGLLGAAFLFLEVQEFAAMIGEQAGPSRSAFLSAFFALVGC 168 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 HG HV GL+WL ++ Q+ KG S RRL C +FWH LD+IW+ +F+ VYL+G Sbjct: 169 HGTHVGLGLLWLGTMMAQLWVKGFRSDILRRLHCFGLFWHALDIIWVAIFTLVYLLGA 226 >gi|224365653|ref|YP_002608380.1| cytochrome c oxidase subunit 3 [Vitis vinifera] gi|147795136|emb|CAN65167.1| hypothetical protein VITISV_029401 [Vitis vinifera] gi|209954177|emb|CAQ77629.1| cytochrome c oxidase subunit 3 [Vitis vinifera] gi|239764721|gb|ACS15192.1| cytochrome c oxidase subunit 3 [Vitis vinifera] Length = 265 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDI- 71 + + V G G +++S+ + F +++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGSIPFIVSEVMFLFALFRASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+F G HG HV G ++ + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFSLATGFHGFHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|76809447|ref|YP_334219.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei 1710b] gi|167825087|ref|ZP_02456558.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei 9] gi|167911808|ref|ZP_02498899.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei 112] gi|226199985|ref|ZP_03795535.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pakistan 9] gi|254195719|ref|ZP_04902145.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei S13] gi|254262091|ref|ZP_04953145.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710a] gi|254296928|ref|ZP_04964381.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 406e] gi|76578900|gb|ABA48375.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei 1710b] gi|157807037|gb|EDO84207.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 406e] gi|169652464|gb|EDS85157.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei S13] gi|225928041|gb|EEH24078.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pakistan 9] gi|254220780|gb|EET10164.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1710a] Length = 201 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 100/200 (50%), Positives = 131/200 (65%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 +L + + LGFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MTLDHAASHDHPP---SHSVLGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + +R WL VT G F+ ME+ EF+HL++ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAH-QRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFW 190 A PQRSAFLSSFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPELTERDIRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|253990903|ref|YP_003042259.1| cytochrome o ubiquinol oxidase subunit III [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782353|emb|CAQ85517.1| cyoC; Cytochrome O ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) [Photorhabdus asymbiotica] Length = 206 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 126/179 (70%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++FA F TYAVL A GP+ ++F +S + V T +LL SS++ FA Sbjct: 29 FGFWIYLMSDCILFACLFATYAVLVNGTAGGPSGKEIFGLSFVLVETFLLLFSSITYGFA 88 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 ML K I + +WL +T FG+ F+ ME+YEF HLI+ P RSAFLS FFALV Sbjct: 89 ML-GMNKGKIGQVNAWLGMTFLFGLGFVAMELYEFHHLIAEGHGPDRSAFLSGFFALVAT 147 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG+HV GL+W+ +++IQ+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYL+G + Sbjct: 148 HGIHVTCGLVWIIIMMIQVTRRGLTDVNKTRLNCLSLFWHFLDVVWICVFTVVYLLGAM 206 >gi|163938625|ref|YP_001643509.1| cytochrome aa3 quinol oxidase subunit III [Bacillus weihenstephanensis KBAB4] gi|229131648|ref|ZP_04260529.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST196] gi|163860822|gb|ABY41881.1| Cytochrome aa3 quinol oxidase subunit III [Bacillus weihenstephanensis KBAB4] gi|228651796|gb|EEL07752.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST196] Length = 200 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFEVKTLLIQTLLLLTSSFTCGIA 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + ++W ++T G F+ EI EF + A Q SAFLS+FF L+G Sbjct: 82 IHEMRKHNQK-GMLAWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|262186737|ref|YP_003275996.1| cytochrome c oxidase subunit 3 [Pleurozia purpurea] gi|237780734|gb|ACR19380.1| cytochrome c oxidase subunit 3 [Pleurozia purpurea] Length = 263 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + + V G G ++++S+ + F F ++ P I V D Sbjct: 67 TYEGHHTFVVQLGLRYGMILFIVSEVMFFLASFRAFSHSSLAPTVEIGAIWPPKGISVLD 126 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 GI ++LLSS + + L + V L+ T F ++F + E+ I Sbjct: 127 PWGIPFLNTLILLSSGAAVTWAHHAILAGLKQQAVYALIATVFLALVFTGFQGIEY---I 183 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + S+FF G HG HV G I+L + I+ + + +W Sbjct: 184 EAPFTISDGIYGSTFFLATGFHGFHVIIGTIFLIICGIRQYLGHFTPKHHFGFEAAAFYW 243 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F +Y G Sbjct: 244 HFVDVVWLFLFVSIYWWG 261 >gi|291612435|ref|YP_003540903.1| cytochrome c oxidase subunit III [Leptodeira septentrionalis polysticta] gi|189164523|gb|ACD77455.1| cytochrome c oxidase subunit III [Leptodeira septentrionalis polysticta] Length = 261 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTNGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGITPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + + +LLSS + + K ++ L+ T G+ F +++ E+ + Sbjct: 126 PTEVPLLNTTVLLSSGATITWSHHTMMKGNKKESTYALMTTIALGIYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + +++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLMICMLRLIWHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|270301130|gb|ACZ59726.2| cytochrome c oxidase subunit III [Peromyscus polionotus leucocephalus] Length = 225 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 30 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 89 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + + LL+T G+ F I++ E+ Sbjct: 90 PLEVP--LLNTSVLLASGVSITWAHHSLMEGK-RSNMNQALLITILLGIYFTILQASEY- 145 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 146 --FETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 203 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 204 WYWHFVDVVWLFLYVSIYWWG 224 >gi|315645044|ref|ZP_07898170.1| cytochrome c oxidase, subunit III [Paenibacillus vortex V453] gi|315279465|gb|EFU42770.1| cytochrome c oxidase, subunit III [Paenibacillus vortex V453] Length = 206 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 2/194 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 + +++ ++ LGFW++L + ++F F T+ L GP ++F + + Sbjct: 13 HEPEKATLEGRNKVLGFWLFLGGEAVLFGTLFATFLALRGQNNEGPTASELFSLPITAAA 72 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVP 136 T++LL+SSL+ FA+ A I K WL+VT G+ F+ +EIYEF I Sbjct: 73 TLILLVSSLTSVFAIQALHRHN-IEKLKLWLIVTVALGLGFLGLEIYEFYEYIVHESFNM 131 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 + SAF S+F+ LVG HG HV FG++W+ +L+ Q+ +KGL ++ +M+WHF+D++ Sbjct: 132 KTSAFSSAFYTLVGFHGAHVAFGVVWISLLIAQLYRKGLTVVTAPKVYVSAMYWHFIDVV 191 Query: 197 WICVFSFVYLMGVV 210 W+ +FS VYL+G V Sbjct: 192 WVFIFSVVYLLGKV 205 >gi|253574578|ref|ZP_04851919.1| cytochrome c oxidase subunit III [Paenibacillus sp. oral taxon 786 str. D14] gi|251846283|gb|EES74290.1| cytochrome c oxidase subunit III [Paenibacillus sp. oral taxon 786 str. D14] Length = 208 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 115/194 (59%), Gaps = 2/194 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 + +++ ++ LGFW++L + ++F F T+ L A GP+ ++F++ + Sbjct: 15 HEPEKATLEGRNKILGFWLFLGGEAVLFGTLFATFLTLRNQIADGPSASELFNLGITAAA 74 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVP 136 T +LL+SSL+ FA+ A K WL VT G+ F+++EIYEFA + + Sbjct: 75 TFILLVSSLTSVFAIQAMHRGD-KGKLAGWLAVTVLLGLAFLVLEIYEFAEYVLHEDYGM 133 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 SAF S+F+ LVG HG HV FG++W+ +L+ Q+ KKGL ++ +++WHF+D++ Sbjct: 134 TTSAFSSAFYTLVGFHGAHVLFGILWISLLIGQLFKKGLTVVTAPKIYVSAIYWHFIDVV 193 Query: 197 WICVFSFVYLMGVV 210 W+ +F+ VYL+G V Sbjct: 194 WVFIFTVVYLLGKV 207 >gi|119387022|ref|YP_918077.1| cytochrome c oxidase, subunit III [Paracoccus denitrificans PD1222] gi|119377617|gb|ABL72381.1| cytochrome c oxidase, subunit III [Paracoccus denitrificans PD1222] Length = 274 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 14/201 (6%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--VLGKNYA--------AGPAPIDV 68 + + V G GF +++MS+ + F +F + L P I Sbjct: 76 TGEHTPVVRIGLQYGFILFIMSEVMFFVAWFWAFIKNALYPMGPDSPIKDGVWPPEGIVT 135 Query: 69 FDIS-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 FD ++T++LLLS ++ ++A A + T++ L+V G+ F ++ YE++ Sbjct: 136 FDPWHLPLINTLILLLSGVAVTWAHHAFVHEGDRKTTINGLIVAVILGVCFTGLQAYEYS 195 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 H + + +F+ G HG HV G I+LFV +I++LK + + Sbjct: 196 H---AAFGLADTVYAGAFYMATGFHGAHVIIGTIFLFVCLIRLLKGQMTQKQHVGFEAAA 252 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ +F +Y+ G Sbjct: 253 WYWHFVDVVWLFLFVVIYIWG 273 >gi|330811630|ref|YP_004356092.1| cytochrome o subunit III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379738|gb|AEA71088.1| Cytochrome o subunit III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 208 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++ Sbjct: 29 TVFGFWLYLMTDCILFASIFAAYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T FG FI MEI EF LIS P RS FLS FF LV Sbjct: 89 FAMLAL-FKGKKTQVLGWLAMTFLFGAGFIGMEINEFHMLISEGYGPNRSGFLSGFFTLV 147 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 G HGLHV GLIW+ +++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLMG Sbjct: 148 GTHGLHVTSGLIWMAIMMYQVQKNGLTATNKTRLSCLSLFWHFLDVVWICVFTVVYLMGT 207 Query: 210 V 210 + Sbjct: 208 L 208 >gi|229162876|ref|ZP_04290833.1| Cytochrome c oxidase subunit 3 [Bacillus cereus R309803] gi|228620758|gb|EEK77627.1| Cytochrome c oxidase subunit 3 [Bacillus cereus R309803] Length = 207 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 103/192 (53%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ ++GFW++L + ++FA F TY L + G ++F + +F+ T Sbjct: 15 EPEKATLEGKNKFVGFWLFLGGETVLFASLFGTYLALKNSTNGGATSQEMFQMPLVFIMT 74 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SSL+ +AM + L+ + + + + Sbjct: 75 MLLLTSSLTSVYAMYHMKNFNFKKMQLWLLITVLLGLGFLGFEIYEFYHYTHEFKHTMRS 134 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ALVG HGLHV FGL W+ L+ + K+GL N + S++WHF+D++W+ Sbjct: 135 SAFGSAFYALVGTHGLHVLFGLCWILTLIFRNAKRGLNLYNAPKFYVASIYWHFIDVVWV 194 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG+V Sbjct: 195 FIFTVVYLMGMV 206 >gi|188575778|ref|YP_001912707.1| cytOchrome o ubiquinol oxidase, subunit III [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520230|gb|ACD58175.1| cytOchrome o ubiquinol oxidase, subunit III [Xanthomonas oryzae pv. oryzae PXO99A] Length = 210 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 30 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 89 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+A+ +++ W+ VTA G+ F+ MEI+EF HLI A P RSAFLS+FF L Sbjct: 90 GFAMIAAHKRKM-GGLYGWMAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFTL 148 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 149 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 208 Query: 209 VV 210 + Sbjct: 209 AL 210 >gi|145579237|pdb|2DYS|C Chain C, Bovine Heart Cytochrome C Oxidase Modified By Dccd gi|145579250|pdb|2DYS|P Chain P, Bovine Heart Cytochrome C Oxidase Modified By Dccd Length = 261 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDI- 71 + G G ++++S L F FF + P I + Sbjct: 68 QGHHTPAVQKGLRYGMILFIISXVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPL 127 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALFITITLGVYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V + LK S + + +WH Sbjct: 184 APFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|163852673|ref|YP_001640716.1| cytochrome c oxidase subunit III [Methylobacterium extorquens PA1] gi|163664278|gb|ABY31645.1| cytochrome c oxidase subunit III [Methylobacterium extorquens PA1] Length = 285 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA-------------- 60 + V G +++ S+ + F +F Y A Sbjct: 73 HEANSGDHTRVVQLHHRYGMIMFIASEVMFFVAWFWAYFEAALYTADPIQPQRVEFTGGM 132 Query: 61 AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFII 120 P I+ FD + + ++LL+S + + L +T G++F Sbjct: 133 WPPKGIEAFDPWHLPLLNTLILLTSGTTVTWAHHALLHGDRKGLKYGLWLTIILGVLFTA 192 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 + YE+AH S + ++FF G HG HV G I+L V +++ + Sbjct: 193 CQAYEYAH---AHFGFSGSIYSATFFMATGFHGAHVIIGTIFLAVCLLRTYQGDFTPKQH 249 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLMGV 209 + +WHF+D++W+ +F+ +Y+ G Sbjct: 250 LGFEFAAWYWHFVDVVWLFLFAAIYVWGA 278 >gi|91225751|ref|ZP_01260780.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus 12G01] gi|269968096|ref|ZP_06182133.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus 40B] gi|91189640|gb|EAS75915.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus 12G01] gi|269827342|gb|EEZ81639.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio alginolyticus 40B] Length = 200 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL N AGP D+F++ +FV T++LL SS++ Sbjct: 20 NKLFGFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKDIFELPFVFVETMLLLFSSITF 79 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F ++A + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 80 GFGIIAMKRNN-VAGLKRWMLVTFALGLGFICMEVYEFHHLIEEGYGPQTSAFLSAFFTL 138 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+G Sbjct: 139 VGTHGLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLLG 198 Query: 209 VV 210 V+ Sbjct: 199 VM 200 >gi|332187386|ref|ZP_08389124.1| cytochrome c oxidase subunit III family protein [Sphingomonas sp. S17] gi|332012547|gb|EGI54614.1| cytochrome c oxidase subunit III family protein [Sphingomonas sp. S17] Length = 211 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWI+L+SD ++F+ FF YAVL A GP+ D+F++ + T +LLLSS +C A Sbjct: 33 YGFWIFLLSDFILFSCFFAAYAVLHDATAGGPSGKDLFELPLVETETALLLLSSFACGLA 92 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +A+ + + + + VTA G F+ +E +EF HLI P RSAFLS+FFALVG Sbjct: 93 GIATLARNMRWFQI-AMAVTALLGAGFLALEAHEFLHLIGEGNGPGRSAFLSAFFALVGC 151 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 HG HV GL+WL ++ Q KG RR++C S+FWH LD+IW+ +F+ VYLMGV Sbjct: 152 HGFHVTLGLLWLTTMMAQTWAKGFREDILRRILCFSLFWHALDIIWVALFTMVYLMGV 209 >gi|229056468|ref|ZP_04195880.1| Quinol oxidase subunit 3 [Bacillus cereus AH603] gi|229165641|ref|ZP_04293413.1| Quinol oxidase subunit 3 [Bacillus cereus AH621] gi|228617815|gb|EEK74868.1| Quinol oxidase subunit 3 [Bacillus cereus AH621] gi|228720865|gb|EEL72415.1| Quinol oxidase subunit 3 [Bacillus cereus AH603] Length = 200 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIA 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + ++W ++T G F+ EI EF I A Q SAFLS+FF L+G Sbjct: 82 IHEMRKHNQK-GMLAWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|226225912|ref|YP_002760018.1| cytochrome c oxidase subunit III [Gemmatimonas aurantiaca T-27] gi|226089103|dbj|BAH37548.1| cytochrome c oxidase subunit III [Gemmatimonas aurantiaca T-27] Length = 230 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 22/207 (10%) Query: 23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG------IFV 76 + + D + W ++ S+C++FA TY + GP P +V+ + Sbjct: 23 TTLGLDNRKIAIWTFIGSECMLFASLISTYLIYKGRSPEGPYPHEVWTNPATGQVFKPIL 82 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVS----------------WLLVTAFFGMIFII 120 + V S+ + LA + WL +T G++F+ Sbjct: 83 NIPVTSASTFVLLMSSLAMVLALAAVQNRHVPKTTTGERILGNSKLWLWMTCLLGIVFLG 142 Query: 121 MEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQ 180 + YEF I + + F SSFF L G HG HV G+IWLF L+ K+GL + Sbjct: 143 CQAYEFTSFIHEGLTIRTNLFGSSFFTLTGFHGAHVTAGVIWLFTLLAIDYKRGLEPKDS 202 Query: 181 RRLICLSMFWHFLDLIWICVFSFVYLM 207 + +++WHF+D+IWI +F+ VYL+ Sbjct: 203 LLVDIAALYWHFVDVIWIVIFTLVYLI 229 >gi|326370353|gb|ADZ56186.1| cytochrome c oxidase subunit III [Orcaella heinsohni] gi|326370367|gb|ADZ56199.1| cytochrome c oxidase subunit III [Orcaella heinsohni] Length = 261 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|260901248|ref|ZP_05909643.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus AQ4037] gi|308106822|gb|EFO44362.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus AQ4037] Length = 200 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ Sbjct: 20 NKLFGFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITF 79 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F ++A + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 80 GFGIIAMKRND-VAGLKRWMLVTFALGLGFICMEVYEFHHLIQEGYGPQTSAFLSAFFTL 138 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMG Sbjct: 139 VGTHGLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMG 198 Query: 209 VV 210 V+ Sbjct: 199 VM 200 >gi|28900484|ref|NP_800139.1| cytochrome o ubiquinol oxidase subunit III [Vibrio parahaemolyticus RIMD 2210633] gi|260365637|ref|ZP_05778158.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus K5030] gi|260877437|ref|ZP_05889792.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus AN-5034] gi|260898918|ref|ZP_05907359.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus Peru-466] gi|28808864|dbj|BAC61972.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus RIMD 2210633] gi|308089175|gb|EFO38870.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus Peru-466] gi|308090543|gb|EFO40238.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus AN-5034] gi|308111449|gb|EFO48989.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio parahaemolyticus K5030] Length = 200 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL N AGP ++F++ +FV T++LL SS++ Sbjct: 20 NKLFGFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKEIFELPFVFVETMLLLFSSITF 79 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F ++A + W+LVT G+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 80 GFGIIAMKRND-VAGLKRWMLVTFALGLGFICMEVYEFHHLIQEGYGPQTSAFLSAFFTL 138 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMG Sbjct: 139 VGTHGLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLMG 198 Query: 209 VV 210 V+ Sbjct: 199 VM 200 >gi|254252016|ref|ZP_04945334.1| cytochrome c oxidase subunit III [Burkholderia dolosa AUO158] gi|124894625|gb|EAY68505.1| cytochrome c oxidase subunit III [Burkholderia dolosa AUO158] Length = 202 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 128/195 (65%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGNQYAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ ++ ++WL VT G F+ ME+ EFAHLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YRQRRGALLAWLAVTFVLGAAFLAMELREFAHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQI--LKKGLISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTVGLLWMIVLAAQIVLRSGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|118590731|ref|ZP_01548132.1| putative cytochrome c oxidase subunit iii transmembrane protein [Stappia aggregata IAM 12614] gi|118436707|gb|EAV43347.1| putative cytochrome c oxidase subunit iii transmembrane protein [Stappia aggregata IAM 12614] Length = 290 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAGPA 64 + V G +++ S+ + F +F Y V PA Sbjct: 83 QGHHTRVVSLHLRYGMLLFIASEVMFFVAWFWAYFDASLFTGEAIQYARVEATGGHWPPA 142 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 I+ FD + + ++LL S + + L T G++F I ++Y Sbjct: 143 GIETFDPWHLPLLNTLILLCSGTTVTWAHHALLHNDRDGLKWGLTCTVLLGILFTICQVY 202 Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184 E++H + + ++FF G HG HV G I+L V + + L Sbjct: 203 EYSH---AAFDFGGNIYGATFFMATGFHGFHVIVGTIFLAVCLFRALAGQFTVEKHFGFE 259 Query: 185 CLSMFWHFLDLIWICVFSFVYLMGV 209 + +WHF+D++W+ +F +Y+ G Sbjct: 260 AAAWYWHFVDVVWLFLFVSIYIWGA 284 >gi|57282259|emb|CAD32358.1| cytochrome oxidase subunit 3 [Tecophilaea violiflora] Length = 265 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIWVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|138897018|ref|YP_001127471.1| cytochrome aa3 quinol oxidase polypeptide III [Geobacillus thermodenitrificans NG80-2] gi|134268531|gb|ABO68726.1| Cytochrome aa3 quinol oxidase polypeptide III [Geobacillus thermodenitrificans NG80-2] Length = 204 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 75/179 (41%), Positives = 115/179 (64%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F TY VL + +GP ++F + + + T++LL SS +C A Sbjct: 26 LGFWIFLGAEVVLFATLFATYLVLFQRTGSGPTAQELFQVKDVLIETLLLLTSSFTCGLA 85 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + R + ++WLLVT G+ FI E+ EF H + A Q SAFLSSFF LVG Sbjct: 86 IFEMRRGR-LAGLLAWLLVTLLLGIGFITFEVREFIHYVHEGATMQTSAFLSSFFVLVGT 144 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+ W+ ++IQ+L++GL R++ +S++WHFLD++WI +F+ VYL+G+V Sbjct: 145 HGAHVSLGIGWMIFIIIQLLQRGLTVKTARKVFIVSLYWHFLDVVWIFIFTLVYLLGMV 203 >gi|186470620|ref|YP_001861938.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum STM815] gi|184196929|gb|ACC74892.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia phymatum STM815] Length = 204 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 95/201 (47%), Positives = 122/201 (60%), Gaps = 1/201 (0%) Query: 6 IGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAP 65 + +P ++ D + D T LGFWIYLMSDCL+FA F T+ VL A GPA Sbjct: 1 MANTPTYAAAAHHDARGHHDDGTRTTLGFWIYLMSDCLIFATLFATFGVLANATAGGPAG 60 Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125 +F++ + T++LL SS + ML+ R + WL VT G FI ME+YE Sbjct: 61 RQLFELPYVLGETLLLLASSFTFGMGMLSVYANR-RGTVIGWLAVTFVLGAAFIGMEVYE 119 Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185 FA L S A P SAFLS +F LVG HGLHV GL+W+ V++ QI + GL +RR+ C Sbjct: 120 FAKLASDGAGPSTSAFLSGYFTLVGTHGLHVTTGLLWIGVMMHQIGRFGLTPVTRRRIAC 179 Query: 186 LSMFWHFLDLIWICVFSFVYL 206 LS+FWHFLDL+WICVFS VYL Sbjct: 180 LSLFWHFLDLVWICVFSLVYL 200 >gi|21230618|ref|NP_636535.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769386|ref|YP_244148.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. campestris str. 8004] gi|188992573|ref|YP_001904583.1| Cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. campestris str. B100] gi|21112199|gb|AAM40459.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574718|gb|AAY50128.1| cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. campestris str. 8004] gi|167734333|emb|CAP52543.1| Cytochrome O ubiquinol oxidase subunit III [Xanthomonas campestris pv. campestris] Length = 209 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 100/182 (54%), Positives = 125/182 (68%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFW+YLMSDCL+FA F TYAVL GP ++FD+ + V T +LL SSLS Sbjct: 29 NTVFGFWVYLMSDCLLFAGLFATYAVLSGATVDGPTAKELFDLKFVLVETFLLLFSSLSF 88 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+++ +++ WL VTA G+ F+ MEI+EF HLI A P RSAFLS+FF L Sbjct: 89 GFAMISAHKRKM-AGLYGWLAVTALLGIGFLCMEIWEFNHLIHEGAGPGRSAFLSAFFFL 147 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV GL+W+ VLVIQI K GL + N RL CLS+FWHFLD+IWI VF+ VYL+G Sbjct: 148 VGTHGLHVASGLLWMAVLVIQISKNGLTARNSTRLACLSLFWHFLDIIWIGVFTVVYLLG 207 Query: 209 VV 210 + Sbjct: 208 AL 209 >gi|37527737|ref|NP_931082.1| cytochrome o ubiquinol oxidase subunit III [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787173|emb|CAE16249.1| cytochrome O ubiquinol oxidase subunit III (ubiquinol oxidase chain C) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 204 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 125/179 (69%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++FA F TYAVL A GP+ ++F +S + V T +LL SS++ FA Sbjct: 27 FGFWIYLMSDCILFACLFATYAVLVNGTAGGPSGKEIFGLSFVLVETFLLLFSSITYGFA 86 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 ML K I + +WL +T FG+ F+ ME+YEF HLI P RSAFLS FFALV Sbjct: 87 ML-GMNKGKIGQVNAWLGMTFLFGLGFVAMELYEFHHLIVDGHGPDRSAFLSGFFALVAT 145 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG+HV GL+W+ +++IQ+ ++GL N+ RL CLS+FWHFLD++WICVF+ VYL+G + Sbjct: 146 HGIHVTCGLVWIIIMIIQVTRRGLTDVNKTRLNCLSLFWHFLDVVWICVFTVVYLLGAM 204 >gi|157367461|gb|ABV45594.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367475|gb|ABV45607.1| cytochrome c oxidase subunit III [Mammuthus primigenius] gi|157367489|gb|ABV45620.1| cytochrome c oxidase subunit III [Mammuthus primigenius] Length = 269 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + V + G +++ S+ L F FF + + L G V Sbjct: 68 QGHHTPVVQESLRYGMILFITSEVLFFTGFFWAFYHSSLAPTPELGSYWPPVGVYPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S ++ ++A + + + LL+T G+ F +++++E+ Sbjct: 128 EVPLLNTSVLLASGVTITWAHHSLMEGNRKN-MLQALLITILLGVYFTLLQMFEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L I+ LK S + + +WH Sbjct: 184 ASFTISDGIYGSTFFVTTGFHGLHVIIGSTFLLTCFIRQLKFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYLSIYWWG 260 >gi|300690264|ref|YP_003751259.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum PSI07] gi|299077324|emb|CBJ49950.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum PSI07] Length = 211 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 34 FGFWVYLMSDLILFASLFATFCVLRSATAGGPDGKELFDLSYVLIETGILLVSSITYGMV 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 94 MIGLQAGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 153 HGLHVASGLLWIAVLMWQISRKGLTATNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211 >gi|50511292|dbj|BAD32647.1| cytochrome c oxidase subunit 3 [Orthetrum triangulare melania] Length = 262 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 11/194 (5%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD-ISGI 74 + G G +++ S+ L F FF Y + P I FD +S Sbjct: 72 HTYPVVIGLRWGMILFITSEVLFFVSFFWAYFHSSLSPTVEIGSMWPPKGISPFDPMSIP 131 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T +LL S ++ ++A + L T G+ F I++ YE+ I Sbjct: 132 MLNTSILLASGVTVTWAHHSLMQGNHSQGM-QGLFFTVLLGIYFTILQAYEY---IEAPF 187 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 S + S+FF G HG+HV G ++L +++ K + + +WHF+D Sbjct: 188 TIADSVYGSTFFMATGFHGIHVIIGTMFLSACLLRHSMKHFSESHHFGFEAAAWYWHFVD 247 Query: 195 LIWICVFSFVYLMG 208 ++W+ ++ +Y G Sbjct: 248 VVWLFLYISIYWWG 261 >gi|326370325|gb|ADZ56160.1| cytochrome c oxidase subunit III [Orcaella heinsohni] gi|326370339|gb|ADZ56173.1| cytochrome c oxidase subunit III [Orcaella heinsohni] Length = 261 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG--- 73 + G G ++++S+ L F FF + + L G + Sbjct: 68 QGHHTPTVQKGLRYGMILFILSEVLFFTGFFWAFYHSSLAPTPELGGSWPPTGIHPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S +S ++A + H + LL+T G+ F +++ E+ Sbjct: 128 EVPLLNTSVLLASGVSITWAHHSLMEGDRKH-MLQALLITIMLGLYFTLLQASEY---YE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S+FF G HGLHV G +L V ++ + S + + +WH Sbjct: 184 APFTISDGIYGSTFFVATGFHGLHVIIGSTFLIVCFMRQMMFHFTSNHHFGFEAAAWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ ++ +Y G Sbjct: 244 FVDVVWLFLYVSIYWWG 260 >gi|117071|sp|P06030|COX3_PARDE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome aa3 subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III; AltName: Full=Oxidase aa(3) subunit 3 gi|45473|emb|CAA29272.1| unnamed protein product [Paracoccus denitrificans] gi|225704|prf||1311262B cytochrome c oxidase III Length = 274 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 14/201 (6%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--VLGKNYA--------AGPAPIDV 68 + + V G GF +++MS+ + F +F + L P I Sbjct: 76 TGEHTPVVRIGLQYGFILFIMSEVMFFVAWFWAFIKNALYPMGPDSPIKDGVWPPEGIVT 135 Query: 69 FDIS-GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 FD ++T++LLLS ++ ++A A + T++ L+V G+ F ++ YE++ Sbjct: 136 FDPWHLPLINTLILLLSGVAVTWAHHAFVLEGDRKTTINGLIVAVILGVCFTGLQAYEYS 195 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 H + + +F+ G HG HV G I+LFV +I++LK + + Sbjct: 196 H---AAFGLADTVYAGAFYMATGFHGAHVIIGTIFLFVCLIRLLKGQMTQKQHVGFEAAA 252 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ +F +Y+ G Sbjct: 253 WYWHFVDVVWLFLFVVIYIWG 273 >gi|254501998|ref|ZP_05114149.1| Cytochrome c oxidase subunit III subfamily [Labrenzia alexandrii DFL-11] gi|222438069|gb|EEE44748.1| Cytochrome c oxidase subunit III subfamily [Labrenzia alexandrii DFL-11] Length = 286 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 17/206 (8%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--------------KNYAAG 62 + + V G +++ S+ + F +F Y Sbjct: 83 AHEGHHTRVVSLHLRYGMILFIASEVMFFVAWFWAYFDAALFAGEAINFARAEATGGVWP 142 Query: 63 PAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIME 122 P I+ FD + + ++LL+S + + L +T G++F I + Sbjct: 143 PEGIETFDPWHLPLLNTLILLASGTTVTWAHHALLHDDREGLKWGLTLTVLLGVLFTICQ 202 Query: 123 IYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRR 182 IYE+ H + + ++F+ G HG HV G I+L V + + L Sbjct: 203 IYEYTH---AAFGFSGNIYGATFYMATGFHGFHVVVGTIFLAVCLFRALAGHFTKEQHFG 259 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 260 FEAAAWYWHFVDVVWLFLFVAIYIWG 285 >gi|78066843|ref|YP_369612.1| Heme/copper-type cytochrome/quinol oxidase subunit 3-like [Burkholderia sp. 383] gi|77967588|gb|ABB08968.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia sp. 383] Length = 202 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 102/195 (52%), Positives = 133/195 (68%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG+ +A GP D+FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGQQHAGGPTAKDLFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F++ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQRRGALLAWLAVTFVLGAAFLVMELREFSHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAGQIVFRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|57282261|emb|CAD32359.1| cytochrome oxidase subunit 3 [Lilium speciosum] Length = 265 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTVFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTLSDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|57282269|emb|CAD32363.1| cytochrome oxidase subunit 3 [Campynema lineare] Length = 265 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILHSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|167720490|ref|ZP_02403726.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei DM98] gi|254191301|ref|ZP_04897805.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pasteur 52237] gi|157938973|gb|EDO94643.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei Pasteur 52237] Length = 201 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 130/200 (65%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 +L + + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MTLDHAASHDHPP---SHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + +R WL VT G F+ ME+ EF+HL++ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAH-QRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFW 190 A PQRSAFLSSFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPDLTERDIRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|52080094|ref|YP_078885.1| cytochrome caa3 oxidase subunit III [Bacillus licheniformis ATCC 14580] gi|52785468|ref|YP_091297.1| CtaE [Bacillus licheniformis ATCC 14580] gi|319646131|ref|ZP_08000361.1| CtaE protein [Bacillus sp. BT1B_CT2] gi|52003305|gb|AAU23247.1| cytochrome caa3 oxidase (subunit III) [Bacillus licheniformis ATCC 14580] gi|52347970|gb|AAU40604.1| CtaE [Bacillus licheniformis ATCC 14580] gi|317391881|gb|EFV72678.1| CtaE protein [Bacillus sp. BT1B_CT2] Length = 207 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 2/188 (1%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ ++GFW++L + ++FA F TY L + A GP ++FD+ +F++T++LL Sbjct: 20 TLEGKNKFIGFWLFLGGETVLFASLFATYLALKNSNAGGPKTTEMFDMGLVFLATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME-AVPQRSAFL 142 SSL+ +AM K WL +T G F+ +EIYEF H I Q SA Sbjct: 80 SSLTSVYAMYHMKNFAFK-KMQVWLGITVLLGAGFLALEIYEFTHYIHEYGFTIQSSALG 138 Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202 S+F+ LVG HG HV FGL+W+ L+I+ +GL N + S++WHF+D++W+ +F+ Sbjct: 139 SAFYTLVGTHGAHVTFGLLWILSLMIRNAGRGLSLYNAPKFFVASLYWHFIDVVWVFIFT 198 Query: 203 FVYLMGVV 210 VYLMG+V Sbjct: 199 VVYLMGMV 206 >gi|238800150|gb|ACR55940.1| cytochrome c oxidase subunit 3 [Anilius scytale] Length = 261 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTTGVQKNMRYGMMLFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGISPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L++T G+ F ++++ E+ Sbjct: 126 PFEVPLLNTAVLLSSGATITWSHHTMMKGNKKEATYALMITVALGVYFTLLQLSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G ++L ++++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTLFLITCLVRLIQYHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F+ VY G Sbjct: 243 HFVDVVWLFLFASVYWWG 260 >gi|71734182|ref|YP_273478.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554735|gb|AAZ33946.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323023|gb|EFW79113.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. glycinea str. B076] gi|320329854|gb|EFW85842.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas syringae pv. glycinea str. race 4] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA FF YAV+ + A GP+ D+F + + V T LL+SS++ Sbjct: 29 TVYGFWLYLMTDCVLFASFFAVYAVMVNSVAGGPSGQDIFLLPFVAVETAFLLVSSITYG 88 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K + + WL +T G FI MEIYEF HLI P RS FLS+FFALV Sbjct: 89 FAMLAL-YKGKKSQVLGWLALTFLCGAAFIGMEIYEFHHLIHEGYGPSRSGFLSAFFALV 147 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 GLHG HV GLIW+ +++ Q+ KKGL + N+ RL CLS+FWHFLD++WI VF+ VYLMG Sbjct: 148 GLHGAHVTSGLIWMAIMMFQVQKKGLTNTNKTRLSCLSLFWHFLDVVWIGVFTVVYLMGA 207 Query: 210 V 210 + Sbjct: 208 L 208 >gi|311029888|ref|ZP_07707978.1| cytochrome c oxidase, subunit III [Bacillus sp. m3-13] Length = 207 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 117/189 (61%), Gaps = 3/189 (1%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGK--NYAAGPAPIDVFDISGIFVSTIVL 81 ++ +LGFW++L + ++FA F TY L + +GP ++FD++ +F +T++L Sbjct: 20 TLEGKNKFLGFWLFLGGETVLFASLFATYLALSGPDSIVSGPDQKELFDLALVFAATMIL 79 Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141 L SSL+ +AM K W+ +T G+ F+I+EIYEF H I + SAF Sbjct: 80 LTSSLTSVYAMYHMKNFNFK-KMQLWMGITWLLGLSFLILEIYEFNHYIHLGHTITSSAF 138 Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201 S+F+ LVG HG HVFFGL+W+ L+I+ +++GL N + S++WHF+D++W+ +F Sbjct: 139 GSAFYVLVGTHGAHVFFGLLWIGTLLIRNMRRGLDLYNAPKFYVASLYWHFIDVVWLFIF 198 Query: 202 SFVYLMGVV 210 + VYLMG+V Sbjct: 199 TVVYLMGLV 207 >gi|17547634|ref|NP_521036.1| transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase [Ralstonia solanacearum GMI1000] gi|17429938|emb|CAD16622.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit III) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 211 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 34 FGFWVYLMSDLIIFASLFATFCVLRSATAGGPDGKELFDLSYVLIETGILLVSSITYGMV 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+ R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 94 MVGLQAGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 153 HGLHVASGLLWIAVLMWQISRKGLTTTNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211 >gi|229592522|ref|YP_002874641.1| cytochrome C oxidase (ubiquinol oxidase) subunit III [Pseudomonas fluorescens SBW25] gi|229364388|emb|CAY52170.1| cytochrome C oxidase (ubiquinol oxidase) subunit III [Pseudomonas fluorescens SBW25] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 123/181 (67%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++ Sbjct: 29 TVFGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K +SWL +T FG+ FI MEI EF LIS P RS FLS+FF LV Sbjct: 89 FAMLAF-YKGNKKGVLSWLALTFLFGLGFIGMEINEFHLLISEGYGPHRSGFLSAFFTLV 147 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 G HGLHV GL+W+ V++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLMG Sbjct: 148 GTHGLHVTAGLLWMAVMMYQVNKHGLTNTNKTRLSCLSLFWHFLDVVWICVFTVVYLMGT 207 Query: 210 V 210 + Sbjct: 208 L 208 >gi|254487574|ref|ZP_05100779.1| cytochrome c oxidase subunit III [Roseobacter sp. GAI101] gi|214044443|gb|EEB85081.1| cytochrome c oxidase subunit III [Roseobacter sp. GAI101] Length = 267 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA---VLGKNYAAG-----PAPIDVFDI 71 + V G GF +++MS+ + F +F T+ + + G P I V Sbjct: 69 GDHTPVVRIGLRYGFILFIMSEVMFFVAWFWTFFKEALYPMSDFPGSEYVQPDIIPVDAF 128 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T++LLLS + ++A A + ++ L + G++F + +E+ LI+ Sbjct: 129 HLPLINTLILLLSGCAVTWAHHALVHENNRKDLITGLALAIGLGLMFTAFQAFEYYELIA 188 Query: 132 MEAVPQRSA-FLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 F SSFF G HG HV G I+L V +I+ LK + +W Sbjct: 189 HYDWQFGGDLFFSSFFMATGFHGFHVIIGTIFLTVCLIRALKGHFTPEQHVGFEAAAWYW 248 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F VY+ G Sbjct: 249 HFVDVVWLFLFFAVYMWG 266 >gi|212638123|ref|YP_002314643.1| cytochrome aa3 quinol oxidase subunit III [Anoxybacillus flavithermus WK1] gi|212559603|gb|ACJ32658.1| Cytochrome aa3 quinol oxidase subunit III [Anoxybacillus flavithermus WK1] Length = 201 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 81/179 (45%), Positives = 119/179 (66%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F Y VLG YA GP P D+F ++ + + T++LL SS +C A Sbjct: 23 LGFWIFLGAEIVLFATLFAVYGVLGHRYAGGPTPSDIFKLNDVLIETLLLLTSSFTCGLA 82 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + + K + WL++T G F+ MEI EF H + A Q SAFLSSFF L+G Sbjct: 83 VFFMRQRDMK-KLLVWLIITLLLGAGFLFMEIREFIHYVHEGATMQTSAFLSSFFVLLGT 141 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV FG+IW +L+IQ+L++GL R++ +S++WHFLD++WI +F+FVYL G+V Sbjct: 142 HGAHVTFGIIWAVMLIIQLLQRGLTPMTARKMFIISLYWHFLDVVWIFIFTFVYLKGMV 200 >gi|52221045|ref|YP_086847.1| cytochrome c oxidase subunit III [Rhineura floridana] gi|47026677|gb|AAT08496.1| cytochrome c oxidase subunit III [Rhineura floridana] Length = 261 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + G G +++ S+ L + T + G G P++ Sbjct: 66 TYQGHHTPPVQSGLRYGMLLFITSEVLFFFGFFWAFYHSSLAPTPEIGGTWPPNGIHPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 F++ ++T VLL S ++ ++A + + T L +T G+ F ++ E+ Sbjct: 126 PFEVP--LLNTTVLLASGITVTWAHHSIMEAKHKEAT-QALSITILLGLYFTALQAMEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 S + ++FF G HGLHV G +L +++ K + + + Sbjct: 182 --YEAPFTISDSVYGTTFFVATGFHGLHVIIGSTFLLTCLLRQTKHHFTTSHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|300702889|ref|YP_003744490.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia solanacearum CFBP2957] gi|299070551|emb|CBJ41846.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia solanacearum CFBP2957] Length = 211 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 89/179 (49%), Positives = 120/179 (67%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 34 FGFWVYLMSDLILFASLFATFCVLRSATAGGPNGKELFDLSYVLIETGILLVSSITYGMV 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+ + R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 94 MIGLQSGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 153 HGLHVASGLLWIAVLMWQISRKGLTATNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211 >gi|270301111|gb|ACZ59688.2| cytochrome c oxidase subunit III [Peromyscus polionotus ammobates] gi|270301132|gb|ACZ59730.2| cytochrome c oxidase subunit III [Peromyscus polionotus allophrys] Length = 223 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 79/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 28 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 87 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + Sbjct: 88 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILPAS 141 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 142 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 201 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 202 WYWHFVDVVWLFLYVSIYWWG 222 >gi|261404604|ref|YP_003240845.1| cytochrome-c oxidase [Paenibacillus sp. Y412MC10] gi|329923617|ref|ZP_08279061.1| cytochrome C oxidase, subunit 3 [Paenibacillus sp. HGF5] gi|261281067|gb|ACX63038.1| Cytochrome-c oxidase [Paenibacillus sp. Y412MC10] gi|328941170|gb|EGG37469.1| cytochrome C oxidase, subunit 3 [Paenibacillus sp. HGF5] Length = 206 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 113/194 (58%), Gaps = 2/194 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 + +++ ++ LGFW++L + ++F F T+ L GP ++F + + Sbjct: 13 HEPEKATLEGRNKVLGFWLFLGGEAVLFGTLFATFLALRGQNNEGPTAAELFSLPITAAA 72 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI-SMEAVP 136 T++LL+SSL+ FA+ A I K WL+VT G+ F+ +EIYEF + Sbjct: 73 TLILLVSSLTSVFAIQALHRHN-IEKLKLWLIVTVVLGLGFLGLEIYEFYEYVVHESFNM 131 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 + SAF S+F+ LVG HG HV FG++W+ +L+ Q+ +KGL ++ +M+WHF+D++ Sbjct: 132 KTSAFSSAFYTLVGFHGAHVAFGVVWISLLIAQLYRKGLTVVTAPKVYVSAMYWHFIDVV 191 Query: 197 WICVFSFVYLMGVV 210 W+ +FS VYL+G V Sbjct: 192 WVFIFSVVYLLGKV 205 >gi|89072119|ref|ZP_01158715.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium sp. SKA34] gi|89052220|gb|EAR57671.1| cytochrome o ubiquinol oxidase, subunit III [Photobacterium sp. SKA34] Length = 198 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 96/192 (50%), Positives = 123/192 (64%), Gaps = 2/192 (1%) Query: 20 KKESCVDHDGTY-LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + + D G GFWIYLMSDC++FA F TYAVL + AGP D+F++ +FV T Sbjct: 8 HEHTHHDTTGIKLFGFWIYLMSDCVLFATLFATYAVLESSSIAGPTGQDIFELPFVFVET 67 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SS++ F M++ ++ L VT G+ FI ME+YEF HLI PQ Sbjct: 68 MLLLFSSITFGFGMISMKRNKITVFKRW-LQVTFLLGLSFICMELYEFHHLIENGNGPQG 126 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAFLS+FF LVG HGLHV FGLIW+ V Q+ KGL R CLS+FWHFLD++WI Sbjct: 127 SAFLSAFFTLVGTHGLHVTFGLIWMVVCYQQLSSKGLTENMSMRFQCLSLFWHFLDIVWI 186 Query: 199 CVFSFVYLMGVV 210 CVF+ VYLMGV+ Sbjct: 187 CVFTIVYLMGVM 198 >gi|83747512|ref|ZP_00944550.1| Cytochrome O ubiquinol oxidase subunit III [Ralstonia solanacearum UW551] gi|83725826|gb|EAP72966.1| Cytochrome O ubiquinol oxidase subunit III [Ralstonia solanacearum UW551] Length = 211 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 89/179 (49%), Positives = 120/179 (67%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 34 FGFWVYLMSDLILFASLFATFCVLRSATAGGPNGKELFDLSYVLIETGILLVSSITYGMV 93 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+ + R + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 94 MIGLQSGR-KDQVMLWLGITFLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFTLVGT 152 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL+W+ VL+ QI +KGL + N RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 153 HGLHVASGLLWIAVLMWQISRKGLTATNSTRLACLSLFWHFLDVVWIGVFTVVYLLGAM 211 >gi|118196943|emb|CAL37040.1| cytochrome oxidase subunit 3 [Eunectes notaeus] Length = 261 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFD 70 + G ++++S+ F FF T + A P I + Sbjct: 66 TYQGHHTKGVQKNMRYGMMLFIVSEVFFFLGFFWTLYHVSLVPAPELGAEWPPTGILPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + + L++T G+ F +++ E+ Sbjct: 126 PFEVPLLNTAVLLSSGATITWSHHTMMSGNKKEATYALMITVALGIYFTALQLSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + + +++K + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTTFLMICLGRLIKFHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F VY G Sbjct: 243 HFVDVVWLFLFVSVYWWG 260 >gi|327441188|dbj|BAK17553.1| heme/copper-type cytochrome/quinol oxidase, subunit 3 [Solibacillus silvestris StLB046] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 3/197 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG--PAPIDVFDISG 73 + K +++ ++ +G WI+L SD ++FA F TY L + AG A D++++ Sbjct: 12 WPKHPEQATMEGKNKLVGLWIFLASDTVLFASVFATYIALKDSGPAGMEFAAKDLYELPL 71 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 FV T++LL SSL+ +AM +W+ +T G+ F+ +EIYEF H + + Sbjct: 72 AFVMTMLLLTSSLTSVYAMYHMRNFNYS-GVRTWMGITVLLGLGFLALEIYEFQHYVHIG 130 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 +SAF S+FF LVG+HGLHV GL+W+ L+I+ +GL N + S++WHF+ Sbjct: 131 FGYTQSAFSSAFFTLVGMHGLHVIIGLVWITGLIIRNSSRGLNLYNAPKFFAASLYWHFI 190 Query: 194 DLIWICVFSFVYLMGVV 210 D++W+ +F+ VYLMGVV Sbjct: 191 DVVWVFIFTVVYLMGVV 207 >gi|264681191|ref|YP_003289034.1| cytochrome c oxidase subunit III [Micrurus fulvius] gi|262073520|gb|ACY09614.1| cytochrome c oxidase subunit III [Micrurus fulvius] Length = 261 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYA----AGPAPIDVFD 70 + G +++ S+ F FF + L PA I+ D Sbjct: 66 TYQGHHTKGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGATWPPAGINPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + S + LL+T GM F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHSLMVGNKKEATRALLITIMLGMYFTDLQLSEYKD-- 183 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++ + + +W Sbjct: 184 -TSFTISDSVYGSLFFVATGFHGLHVMIGTSFLLVCLVRLARSHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D+IW+ ++ VY G Sbjct: 243 HFVDIIWLFLYISVYWWG 260 >gi|74487330|ref|YP_313674.1| cytochrome c oxidase subunit III [Ovophis okinavensis] gi|73760179|dbj|BAE19981.1| cytochrome oxidase [Ovophis okinavensis] Length = 261 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF T + P I+ + Sbjct: 66 TYQGHHTPGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L++T G+ F +++ E+ Sbjct: 126 PMDVPLLNTAVLLSSGATITWSHHALMKGNKKEATYALMITIILGVYFTALQVSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + ++++++ + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLTICLMRLIRFHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYVSVYWWG 260 >gi|57281954|emb|CAD19464.1| cytochrome oxidase subunit 3 [Colchicum persicum] Length = 265 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGISVLDPR 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A ++ + V L+ T ++ + E+ Sbjct: 131 KIPFLNTPILPSSGAAVTWAHHAILARKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWGGGI 265 >gi|312962954|ref|ZP_07777440.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens WH6] gi|311282723|gb|EFQ61318.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens WH6] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 123/181 (67%), Gaps = 1/181 (0%) Query: 30 TYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCS 89 T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS++ Sbjct: 29 TVFGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSITYG 88 Query: 90 FAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALV 149 FAMLA K +SWL +T FG+ FI MEI EF LIS P RS FLS+FF LV Sbjct: 89 FAMLAF-YKGNKKGVLSWLGLTFLFGLGFIGMEINEFHLLISEGYGPHRSGFLSAFFTLV 147 Query: 150 GLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGV 209 G HGLHV GL+W+ V++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYLMG Sbjct: 148 GTHGLHVSAGLLWMAVMMYQVNKHGLTNTNKTRLSCLSLFWHFLDVVWICVFTVVYLMGT 207 Query: 210 V 210 + Sbjct: 208 L 208 >gi|167563462|ref|ZP_02356378.1| ubiquinol oxidase, subunit III [Burkholderia oklahomensis EO147] gi|167570630|ref|ZP_02363504.1| ubiquinol oxidase, subunit III [Burkholderia oklahomensis C6786] Length = 201 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 L + + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MMLDHAASHDHPP---SHSVFGFWLYLMTDCIVFAALFATFAVLGNQFAGGPTGKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + R WL VT G F+ ME+ EF+HLI+ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAHK-RRRGAVFGWLAVTFVLGAAFLAMELREFSHLIA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFW 190 A PQRSAFLSSFF LVG HGLHV GL+W+ VL +Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMVVLALQALRRPELTERDVRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|53719987|ref|YP_108973.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei K96243] gi|167816683|ref|ZP_02448363.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei 91] gi|167903560|ref|ZP_02490765.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei NCTC 13177] gi|217421180|ref|ZP_03452685.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia pseudomallei 576] gi|52210401|emb|CAH36382.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia pseudomallei K96243] gi|217396592|gb|EEC36609.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia pseudomallei 576] Length = 201 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 130/200 (65%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 +L + + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MTLDHAASHDHPP---SHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + +R WL VT G F+ ME+ EF+HL++ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAH-QRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFW 190 A PQRSAFLSSFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPELTERDIRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|323649901|ref|YP_004237274.1| cytochrome c oxidase subunit 3 [Ricinus communis] gi|322394281|gb|ADW96038.1| cytochrome c oxidase subunit 3 [Ricinus communis] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + V G GF +++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGFIPFIVSEVMFLFAFFWASFHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +LL S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|57281948|emb|CAD19461.1| cytochrome oxidase subunit 3 [Serapias vomeracea] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V + Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLNPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSLYGSTFFLATGFHGFHVIIGTLFLIICCIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|76780588|emb|CAD92024.1| cytochrome oxidase subunit 3 [Burchardia rosea] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGISVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKDK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWGGGI 265 >gi|212725557|ref|YP_002317304.1| cytochrome c oxidase subunit III [Achalinus meiguensis] gi|211997654|gb|ACJ14782.1| cytochrome c oxidase subunit III [Achalinus meiguensis] Length = 261 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAGPAPIDVFDISG--- 73 + G +++ S+ F FF T + L G Sbjct: 68 QGHHTKGVQKNMRYGMALFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGITPLNPL 127 Query: 74 --IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T VLL S + +++ A T+ + + + Sbjct: 128 EVPLLNTAVLLSSGATVTWSHHALMKGDKKESTI----ALLATIALGAYFTALQLSEYKE 183 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S FF G HGLHV G ++L V +++++ + + +WH Sbjct: 184 TPFTISDSVYGSLFFVATGFHGLHVMIGTLFLTVCLVRLINFHFTTTHHFGYEAAIWYWH 243 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++W+ +F VY G Sbjct: 244 FVDIVWLFLFISVYWWG 260 >gi|52221031|ref|YP_086886.1| cytochrome c oxidase subunit III [Geocalamus acutus] gi|47026719|gb|AAT08535.1| cytochrome c oxidase subunit III [Geocalamus acutus] gi|121309382|dbj|BAF43998.1| cytochrome oxidase subunit 3 [Geocalamus acutus] Length = 261 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 72/194 (37%), Gaps = 11/194 (5%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTY--AVLGKNYAAGPAPIDVFDISG-----I 74 + G G +++ S+ L F FF + + L + G I Sbjct: 71 HTPSVQRGLRYGMALFITSEVLFFIGFFWAFYHSSLAPTHELGNQWPPSGIIPLNPLEVP 130 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 ++T VLL S ++ ++A A ++ + + Sbjct: 131 LLNTAVLLASGVTVTWAHHAIMAGMRKEAV----QGLLLTALLGLYFTALQAMEYYEAPF 186 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 S + S+FF G HGLHV G +L V + + L + + + +WHF+D Sbjct: 187 TISDSTYGSTFFVATGFHGLHVIIGTSFLLVCLWRQLNYHFTTHHHFGFEAAAWYWHFVD 246 Query: 195 LIWICVFSFVYLMG 208 ++W+ ++ +Y G Sbjct: 247 VVWLFLYISIYWWG 260 >gi|76780578|emb|CAD92019.1| cytochrome oxidase subunit 3 [Lomandra ordii] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWANHAILAGKEK-RAVYALIATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|148254208|ref|YP_001238793.1| cytochrome o ubiquinol oxidase subunit III [Bradyrhizobium sp. BTAi1] gi|146406381|gb|ABQ34887.1| cytochrome bb3 quinol oxidase subunit 3 [Bradyrhizobium sp. BTAi1] Length = 213 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 85/215 (39%), Positives = 125/215 (58%), Gaps = 12/215 (5%) Query: 1 MSRQKIGKSPNFSLFYVKDKKESCVDHDG-------TYLGFWIYLMSDCLMFAVFFVTYA 53 MS + ++P Y +HDG T GFWI+L+SD +MF+ FF ++A Sbjct: 1 MSVSAVEQAPA----YADPHHLRAAEHDGPAPKRIVTGYGFWIFLLSDIVMFSCFFASFA 56 Query: 54 VLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAF 113 VL K A GP ++FDI + + T +LL+SS +C A +A+ + V+ Sbjct: 57 VLSKATAGGPGGAELFDIRNVAIETALLLVSSFACGMASIAAERHSALWFQVAMAATGLL 116 Query: 114 FGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK 173 G F+++E EF L+ P RSAFLS+FF LVG HGLHV GL+WL ++ Q++ K Sbjct: 117 -GAGFLLLEAREFTDLVGRGDGPSRSAFLSAFFTLVGCHGLHVGAGLLWLLTMMAQVMTK 175 Query: 174 GLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 G + +RR++C ++FWH LD+IW+ VFS VYL+G Sbjct: 176 GFRADIERRILCFALFWHALDIIWVAVFSVVYLLG 210 >gi|291612393|ref|YP_003540864.1| cytochrome c oxidase subunit III [Hypsiglena slevini] gi|189164449|gb|ACD77387.1| cytochrome c oxidase subunit III [Hypsiglena slevini] Length = 261 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I D Sbjct: 66 TYQGHHTKGVQKNMRYGMMLFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGITPLD 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L+ T G+ F +++ E+ + Sbjct: 126 PMEVPLLNTTVLLSSGATITWSHHTMMKGNKKEATYALMATIMLGVYFTALQMSEY---L 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLTVCILRLIMHHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|76780582|emb|CAD92021.1| cytochrome oxidase subunit 3 [Polygonatum hookeri] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G +++ S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIASEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L LS + ++A A + + V L T ++ + E+ Sbjct: 131 EIPFLNTPILPLSGAAVTWAHHAILAGKEK-RAVYALRATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F+ +Y G + Sbjct: 247 FVDVVRLFPFASIYWGGGI 265 >gi|74310579|ref|YP_313700.1| cytochrome c oxidase subunit III [Python regius] gi|73760207|dbj|BAE20007.1| cytochrome oxidase subunit 3 [Python regius] Length = 261 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 74/196 (37%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G ++++S+ F FF T + P I + Sbjct: 68 QGHHTKGVQKNMRYGMMLFIVSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGITPLNPL 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LLSS + + + + L++T G+ F +++ E+ Sbjct: 128 EVPLLNTAVLLSSGATVTWSHHATMQGNKKEATYALMITIALGIYFTALQLSEYM---ET 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S FF G HG HV G +L V + +++ + + +WHF Sbjct: 185 PFTISDSVYGSLFFVATGFHGFHVMIGTTFLMVCLARLINFHFTTSHHFGYEAAIWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ +F VY G Sbjct: 245 VDVVWLFLFVSVYWWG 260 >gi|15226079|ref|NP_178782.1| cytochrome c oxidase subunit 3 [Arabidopsis thaliana] gi|26556997|ref|NP_085532.2| cytochrome c oxidase subunit 3 [Arabidopsis thaliana] gi|15215914|emb|CAA69818.3| cytochrome c oxidase subunit 3 [Arabidopsis thaliana] gi|20198123|gb|AAM15412.1| hypothetical protein [Arabidopsis thaliana] gi|330250984|gb|AEC06078.1| cytochrome c oxidase subunit 3 [Arabidopsis thaliana] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 85/199 (42%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAV--FFVTYAVLGKNYAAG----PAPIDVFDIS 72 + + V G G ++++S+ + F + +++ L G P I+V D Sbjct: 71 EGHHTKVVQLGPRYGSILFIVSEVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIEVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ +F +Y G + Sbjct: 247 FVDVVWLFLFVSIYWWGGI 265 >gi|76780574|emb|CAD92017.1| cytochrome oxidase subunit 3 [Johnsonia pubescens] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALIATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWGGGI 265 >gi|209886932|ref|YP_002290785.1| cytochrome c oxidase subunit III [Gloydius blomhoffi brevicaudus] gi|194395436|gb|ACF60273.1| cytochrome c oxidase subunit III [Gloydius blomhoffi brevicaudus] Length = 261 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF T + P I + Sbjct: 66 TYQGHHTLGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGIYPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L +T G+ F +++ E+A Sbjct: 126 PMDVPLLNTAVLLSSGATITWSHHTMMKGNKKEATYALAITIVLGIYFTALQVSEYA--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + + ++++ + + +W Sbjct: 183 ETPFTIPDSVYGSLFFVATGFHGLHVMIGTSFLMICLARLIQYHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYVSVYWWG 260 >gi|312881377|ref|ZP_07741174.1| cytochrome o ubiquinol oxidase subunit III [Vibrio caribbenthicus ATCC BAA-2122] gi|309371017|gb|EFP98472.1| cytochrome o ubiquinol oxidase subunit III [Vibrio caribbenthicus ATCC BAA-2122] Length = 199 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 118/182 (64%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFWIYLMSDC++FA F TYAVL +GP D+F++ +FV T++LL SS++ Sbjct: 19 NKLFGFWIYLMSDCILFATLFATYAVLETGSISGPTGKDIFELPFVFVETMLLLFSSITF 78 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F M+A I W+ VT G+ FI MEIYEF HLI PQ SAFLS+FF L Sbjct: 79 GFGMIAMKRND-IAGLKRWMKVTFLLGVGFIAMEIYEFHHLIEAGYGPQESAFLSAFFTL 137 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGL+WL V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMG Sbjct: 138 VGTHGLHVTFGLVWLAVCYHQLSTKGLNENMAMRFSCLSLFWHFLDIVWICVFTIVYLMG 197 Query: 209 VV 210 V+ Sbjct: 198 VM 199 >gi|57282275|emb|CAD32366.1| cytochrome oxidase subunit 3 [Philesia magellanica] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWGGGI 265 >gi|296492463|gb|ADH29759.1| cytochrome c oxidase subunit III [Peromyscus maniculatus] Length = 255 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 60 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 119 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 120 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRNNMNQALLITILLGIYFTILQAS 173 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 174 EYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLMVCLLRQLKYHFTSKHHFGFEAAA 233 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 234 WYWHFVDVVWLFLYVSIYWWG 254 >gi|301353294|ref|YP_003795367.1| cytochrome c oxidase subunit III [Anilius scytale] gi|226446133|gb|ACO58427.1| cytochrome c oxidase subunit 3 [Anilius scytale] Length = 261 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTTGVQKNMRYGMMLFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGISPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L++T G+ F ++++ E+ Sbjct: 126 PFEVPLLNTAVLLSSGATITWSHHTMMKGNKKEATYALMITVALGVYFTLLQLSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G ++L + ++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTLFLITCLTRLIQYHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F+ VY G Sbjct: 243 HFVDVVWLFLFASVYWWG 260 >gi|76780590|emb|CAD92025.1| cytochrome oxidase subunit 3 [Uvularia perfoliata] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWANHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|15615176|ref|NP_243479.1| cytochrome caa3 oxidase (subunit III) [Bacillus halodurans C-125] gi|10175234|dbj|BAB06332.1| cytochrome caa3 oxidase (subunit III) [Bacillus halodurans C-125] Length = 206 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 112/193 (58%), Gaps = 2/193 (1%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + + ++ +LGFW +L + ++FA FF TY L A GP P D+F + +F+ T Sbjct: 14 HPERATLEGKNKFLGFWFFLGGETILFATFFGTYLGLRSGTADGPLPQDIFALPLVFIMT 73 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME-AVPQ 137 ++LL SSL+ A +A+ K W+ +T G+ F+ EIYEF + Sbjct: 74 MLLLTSSLTSVIA-MAAMKKNKFGAMKLWMWITVLLGLGFLGFEIYEFYEYVHHYELGFS 132 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIW 197 SAF SSF++LVGLHG HV FGL W+ L+I+ + G+ N + S++WHF+D++W Sbjct: 133 TSAFASSFYSLVGLHGAHVAFGLSWIITLLIRYNRSGITLTNAPKFYVASLYWHFIDVVW 192 Query: 198 ICVFSFVYLMGVV 210 + +F+ VYLMGV+ Sbjct: 193 VFIFTVVYLMGVL 205 >gi|114561410|ref|YP_748923.1| cytochrome c oxidase, subunit III [Shewanella frigidimarina NCIMB 400] gi|114332703|gb|ABI70085.1| cytochrome c oxidase, subunit III [Shewanella frigidimarina NCIMB 400] Length = 211 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 92/182 (50%), Positives = 129/182 (70%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 T GFWIYLM+DC++FA F TYAVL N G + D+F++ + + T LL+SS++ Sbjct: 31 NTLFGFWIYLMTDCILFASVFATYAVLFMNTDGGVSGKDIFELDFVLIETAALLVSSITY 90 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 FAM+ + + T+ WLL+T G +FI ME+YEF HLI P RSAFLS+FFAL Sbjct: 91 GFAMICAR-HQKKAATLGWLLITFALGCVFIAMEVYEFHHLIEHGNGPDRSAFLSAFFAL 149 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG+HGLHV GLIW+ ++++++LK GL + + RL CLS+FWHFLD++W+CVF+ VYL+G Sbjct: 150 VGMHGLHVTAGLIWMLIMMVEVLKTGLTNRSITRLSCLSLFWHFLDIVWVCVFTVVYLLG 209 Query: 209 VV 210 V+ Sbjct: 210 VL 211 >gi|57281941|emb|CAD19457.1| cytochrome oxidase subunit 3 [Sansevieria trifasciata] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|57282263|emb|CAD32360.1| cytochrome oxidase subunit 3 [Luzuriaga radicans] Length = 265 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWGGGI 265 >gi|70732358|ref|YP_262114.1| cytochrome o ubiquinol oxidase subunit III [Pseudomonas fluorescens Pf-5] gi|68346657|gb|AAY94263.1| cytochrome o ubiquinol oxidase, subunit III [Pseudomonas fluorescens Pf-5] Length = 208 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 + T GFW+YLM+DC++FA F YAVL N A GP+ D+F++ + T +LL SS+ Sbjct: 26 GEMTVFGFWLYLMTDCILFASIFAVYAVLVNNVAGGPSGHDIFELPYVLGETALLLFSSI 85 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + FAMLA + + + WL +T FG+ FI MEI EF LIS P RS FLS FF Sbjct: 86 TYGFAMLAF-FRGNKKQVLGWLAMTFLFGLGFIGMEINEFHLLISEGYGPSRSGFLSGFF 144 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 LVG HGLHV GLIW+ +++ Q+ K GL + N+ RL CLS+FWHFLD++WICVF+ VYL Sbjct: 145 TLVGTHGLHVTSGLIWMAIMMYQVQKNGLTATNKTRLSCLSLFWHFLDVVWICVFTVVYL 204 Query: 207 MGVV 210 MG + Sbjct: 205 MGTM 208 >gi|56751515|ref|YP_172216.1| cytochrome c oxidase subunit III [Synechococcus elongatus PCC 6301] gi|81301413|ref|YP_401621.1| cytochrome c oxidase subunit III [Synechococcus elongatus PCC 7942] gi|56686474|dbj|BAD79696.1| cytochrome c oxidase subunit III [Synechococcus elongatus PCC 6301] gi|81170294|gb|ABB58634.1| cytochrome c oxidase subunit III [Synechococcus elongatus PCC 7942] Length = 195 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 5/191 (2%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 K D G ++L+++ ++F F Y + + ++ ++ Sbjct: 9 KTHHLEEAHPDHRIFGLILFLVAEGMIFLGLFAAYLTFRAVNSLPAEQMPELELLIPAIN 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T +L+ SS A A + + +TA G++F++ +IYE++ + + Sbjct: 69 TTILISSSFVIHGAEDAIKQNNVK-AVQRYFGITALMGVVFLVGQIYEYSQ---LTFGLR 124 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISG-NQRRLICLSMFWHFLDLI 196 + F S+F+AL G HGLHV GL+ + ++ + + S + + ++WHF+D++ Sbjct: 125 DNLFASTFYALTGFHGLHVLVGLLAILAVLWRSRQPDYYSDQHHFGIEAAEIYWHFVDIV 184 Query: 197 WICVFSFVYLM 207 WI +F +YL+ Sbjct: 185 WIVLFVLLYLI 195 >gi|57282237|emb|CAD32347.1| cytochrome oxidase subunit 3 [Xanthorrhoea resinosa] Length = 265 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALIATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|76780592|emb|CAD92026.1| cytochrome oxidase subunit 3 [Paris quadrifolia] Length = 265 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALAATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICDIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWGGGI 265 >gi|239995159|ref|ZP_04715683.1| cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) [Alteromonas macleodii ATCC 27126] Length = 205 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 93/183 (50%), Positives = 127/183 (69%), Gaps = 1/183 (0%) Query: 28 DGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLS 87 + T GFW+YLM+DCL+FA FF TYAVL N A G + D+F+++ + V T LLLSS++ Sbjct: 24 NNTVFGFWLYLMTDCLLFASFFATYAVLFMNTAGGVSGKDIFELNFVAVETAALLLSSIA 83 Query: 88 CSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFA 147 FAM+ + + ++WL VT G FI ME+YEF HLI PQ+SAFL++FF+ Sbjct: 84 FGFAMICAHRQN-KSGALAWLAVTWALGACFIGMEVYEFHHLIEHGNGPQQSAFLTAFFS 142 Query: 148 LVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207 LVGLHGLHV GLIW+ ++ I++ ++ L RL CLS+FWHFLD++WICVF+ VYLM Sbjct: 143 LVGLHGLHVTAGLIWMTIMFIEVTRRDLGEQTVTRLSCLSLFWHFLDIVWICVFTVVYLM 202 Query: 208 GVV 210 G + Sbjct: 203 GAM 205 >gi|254522775|ref|ZP_05134830.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp. SKA14] gi|219720366|gb|EED38891.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas sp. SKA14] Length = 212 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 T GFW+YLMSDCL+FA F TY VL GP D+F++ + T +LL SSL Sbjct: 30 GGNTVFGFWVYLMSDCLIFASLFATYVVLSGGTDGGPGAKDLFELPFVAWETALLLTSSL 89 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + M+A K++ + L +T G F+ ME++EF HLI P RSAFLS+FF Sbjct: 90 TFGLGMIAMHRKQMGQMYLW-LAITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFF 148 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 ALVG HGLHV GL+WL V+ +Q+ K GL N+ R+ CLS+FWHFLDLIWI VFS VYL Sbjct: 149 ALVGTHGLHVSAGLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYL 208 Query: 207 MGVV 210 G + Sbjct: 209 NGAL 212 >gi|57281921|emb|CAD19447.1| cytochrome oxidase subunit 3 [Asparagus sp. Quagliariello 16104] gi|57282219|emb|CAD32338.1| cytochrome oxidase subunit 3 [Tulbaghia alliacea] gi|57282221|emb|CAD32339.1| cytochrome oxidase subunit 3 [Agave americana] gi|57282223|emb|CAD32340.1| cytochrome oxidase subunit 3 [Yucca sp. Quagliariello 16107] gi|57282225|emb|CAD32341.1| cytochrome oxidase subunit 3 [Polianthes tuberosa] gi|57282229|emb|CAD32343.1| cytochrome oxidase subunit 3 [Anthericum liliago] gi|57282249|emb|CAD32353.1| cytochrome oxidase subunit 3 [Herreria salsaparilha] Length = 265 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|126453691|ref|YP_001067025.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106a] gi|167846590|ref|ZP_02472098.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei B7210] gi|237813134|ref|YP_002897585.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia pseudomallei MSHR346] gi|242315461|ref|ZP_04814477.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106b] gi|126227333|gb|ABN90873.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106a] gi|237505149|gb|ACQ97467.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia pseudomallei MSHR346] gi|242138700|gb|EES25102.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1106b] Length = 201 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 129/200 (64%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 L + + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MMLDHAASHDHPP---SHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + +R WL VT G F+ ME+ EF+HL++ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAH-QRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKK-GLISGNQRRLICLSMFW 190 A PQRSAFLSSFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPDLTERDIRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|1502349|emb|CAA92212.1| cytochrome oxidase subunit 3 [Magnolia grandiflora] Length = 265 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDI- 71 + + V G G +++S+ + F +++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGSIPFIVSEVMFLFALFRASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T + S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPIPPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+F + G HG HV G ++ + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFSSATGFHGFHVIIGTLFSIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|302632645|ref|YP_003848740.1| cytochrome c oxidase subunit III [Crotalus horridus] gi|302151286|gb|ADK97522.1| cytochrome c oxidase subunit III [Crotalus horridus] Length = 260 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 2/194 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAGPAPIDVFDISGI 74 + G +++ S+ F FF T + L G Sbjct: 66 TYQGHHTLGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGINPLN 125 Query: 75 FVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEA 134 + +L + L S A + S + ++ + + + Sbjct: 126 PMDVPLLNTAVLLSSGATITSHHTMMKGNKKEATYALMITIILGTYFTALQVSEYMETPF 185 Query: 135 VPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLD 194 S + S FF G HGLHV G +L + +I++++ + + +WHF+D Sbjct: 186 TISDSVYGSLFFVATGFHGLHVMIGTSFLLICLIRLIRFHFTTTHHFWYEAAIWYWHFVD 245 Query: 195 LIWICVFSFVYLMG 208 ++W+ ++ VY G Sbjct: 246 IVWLFLYISVYWWG 259 >gi|81176513|ref|YP_398397.1| cox3 [Triticum aestivum] gi|13698|emb|CAA34071.1| unnamed protein product [Triticum aestivum] gi|78675237|dbj|BAE47662.1| cox3 [Triticum aestivum] gi|169649050|gb|ACA62611.1| cox3 [Triticum aestivum] Length = 265 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ + + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGQMTKKHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|209886918|ref|YP_002290772.1| cytochrome c oxidase subunit III [Naja atra] gi|194395408|gb|ACF60247.1| cytochrome c oxidase subunit III [Naja atra] Length = 261 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I+ + Sbjct: 66 TYQGHHTEGVQMNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + + L++T G+ F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHTLMKGNKKEAIYALIITVVLGVYFTALQLSEYQ--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLLVCLMRMTRSHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDVVWLFLYISVYWWG 260 >gi|194364920|ref|YP_002027530.1| cytochrome o ubiquinol oxidase subunit III [Stenotrophomonas maltophilia R551-3] gi|194347724|gb|ACF50847.1| cytochrome o ubiquinol oxidase, subunit III [Stenotrophomonas maltophilia R551-3] Length = 212 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 T GFW+YLMSDCL+FA F TY VL GP D+F++ + T +LL SSL Sbjct: 30 GGNTVFGFWVYLMSDCLIFASLFATYVVLAGGTDGGPTAKDLFELPFVAWETALLLTSSL 89 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + M+A K++ + L +T G F+ ME++EF HLI P RSAFLS+FF Sbjct: 90 TFGLGMIAMHRKQMGQMYLW-LGITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFF 148 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 ALVG HGLHV GL+WL V+ +Q+ K GL N+ R+ CLS+FWHFLDLIWI VFS VYL Sbjct: 149 ALVGTHGLHVSAGLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYL 208 Query: 207 MGVV 210 G + Sbjct: 209 NGAL 212 >gi|190573373|ref|YP_001971218.1| putative quinol oxidase subunit 3 [Stenotrophomonas maltophilia K279a] gi|30351179|gb|AAP22950.1| cytochrome oxidase subunit III [Rhizobium arachis] gi|190011295|emb|CAQ44908.1| putative quinol oxidase subunit 3 [Stenotrophomonas maltophilia K279a] Length = 212 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Query: 27 HDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSL 86 T GFW+YLMSDCL+FA F TY VL GP D+F++ + T +LL SSL Sbjct: 30 GGNTVFGFWVYLMSDCLIFASLFATYVVLAGGTDGGPTAKDLFELPFVAWETALLLTSSL 89 Query: 87 SCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFF 146 + M+A K++ + L +T G F+ ME++EF HLI P RSAFLS+FF Sbjct: 90 TFGLGMIAMHRKQMGQMYLW-LGITWLLGFGFMCMEVWEFQHLIHQGYGPDRSAFLSAFF 148 Query: 147 ALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYL 206 ALVG HGLHV GL+WL V+ +Q+ K GL N+ R+ CLS+FWHFLDLIWI VFS VYL Sbjct: 149 ALVGTHGLHVSAGLLWLLVMFVQLKKYGLTPTNKTRMACLSLFWHFLDLIWIGVFSVVYL 208 Query: 207 MGVV 210 G + Sbjct: 209 NGAL 212 >gi|57281927|emb|CAD19450.1| cytochrome oxidase subunit 3 [Agapanthus africanus] Length = 265 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|74310565|ref|YP_313713.1| cytochrome c oxidase subunit III [Acrochordus granulatus] gi|73760221|dbj|BAE20020.1| cytochrome oxidase subunit 3 [Acrochordus granulatus] Length = 261 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + G ++++S+ F FF T + P I + Sbjct: 68 QGHHTKGVQKNMRYGMILFIVSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGITPLNPM 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LLSS + + T + L++T G+ F +++ E+ Sbjct: 128 EVPLLNTAVLLSSGATITWSHHTMTNGNKKEATYALMITIMLGIYFTTLQLSEYKD---T 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S FF G HGLHV G +L + +I++++ + + +WHF Sbjct: 185 PFTISDSVYGSLFFVATGFHGLHVMIGTTFLIICLIRLIQFHFTTTHHFGYEAAIWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ +F VY G Sbjct: 245 VDIVWLFLFISVYWWG 260 >gi|5835575|ref|NP_008425.1|COX3_13972 cytochrome c oxidase subunit III [Dinodon semicarinatus] gi|14194494|sp|O79552|COX3_DINSE RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|3582128|dbj|BAA33028.1| cytochrome oxidase subunit III [Dinodon semicarinatus] Length = 261 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I + Sbjct: 66 TYQGHHTSGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPIGITPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L++T G F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHTMMKGNKKEATHALMLTIILGAYFTALQLSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V +++ K + +W Sbjct: 183 ETPFTIADSVYGSLFFVATGFHGLHVMIGTSFLMVCALRLAKHHFTITHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|164420844|ref|YP_001648793.1| cytochrome c oxidase subunit III [Naja naja] gi|84371456|gb|ABC55910.1| cytochrome oxidase subunit 3 [Naja naja] Length = 261 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I+ + Sbjct: 66 TYQGHHTEGVQMNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + + L++T G+ F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHTLMKGNKKEAIYALIITVVLGVYFTALQLSEYQ--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMVGTSFLLVCLMRMTRSHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDVVWLFLYISVYWWG 260 >gi|126441942|ref|YP_001059740.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 668] gi|134277941|ref|ZP_01764656.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 305] gi|167744574|ref|ZP_02417348.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 14] gi|167895176|ref|ZP_02482578.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 7894] gi|167919810|ref|ZP_02506901.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei BCC215] gi|254184266|ref|ZP_04890856.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1655] gi|126221435|gb|ABN84941.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia pseudomallei 668] gi|134251591|gb|EBA51670.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 305] gi|184214797|gb|EDU11840.1| ubiquinol oxidase, subunit III [Burkholderia pseudomallei 1655] Length = 201 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 129/200 (64%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 L + + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MMLDHAASHDHPP---SHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + +R WL VT G F+ ME+ EF+HL++ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAH-QRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFW 190 A PQRSAFLSSFF LVG HGLHV GL+W+ VLV Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPELTERDIRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|74310512|ref|YP_313687.1| cytochrome c oxidase subunit III [Boa constrictor] gi|73760193|dbj|BAE19994.1| unnamed protein product [Boa constrictor] Length = 261 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFD 70 + G ++++S+ F FF T + A PA + + Sbjct: 66 TYQGHHTKGVQKNMRYGMMLFIVSEVFFFLGFFWTLYHVSLVPAPELGAEWPPAGVAPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LL+S + + K ++ L++T G+ F +++ E+ Sbjct: 126 PFEVPLLNTAVLLASGATVTWSHHALMKGNKKESTYALIITIALGVYFTALQLSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L + + +++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTTFLIICLGRLINFHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F VY G Sbjct: 243 HFVDVVWLFLFVSVYWWG 260 >gi|115526744|ref|YP_783655.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris BisA53] gi|115520691|gb|ABJ08675.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris BisA53] Length = 285 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 79/205 (38%), Gaps = 17/205 (8%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA--------------AGP 63 S V G +++ S+ + F +F Y A P Sbjct: 73 HKGDHSRVVQISHRYGMILFIASEVMFFVAWFWAYFNSALFPADPVHATREALFGGVWPP 132 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 ++ FD + + ++LL+S + + L+ T G++F ++ Sbjct: 133 KGVETFDPWHLPLLNTLILLTSGTTVTWAHHALLNNDRKGLKWGLICTIALGVLFSCVQA 192 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YE++H + + ++FF G HG HV G I+L V + + + Sbjct: 193 YEYSH---AAFSFAGNVYGATFFMATGFHGFHVLVGTIFLAVCLFRAMAGHFTPQQHLGF 249 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 250 EFAAWYWHFVDVVWLFLFVSIYVWG 274 >gi|262396850|ref|YP_003288703.1| cytochrome O ubiquinol oxidase subunit III [Vibrio sp. Ex25] gi|262340444|gb|ACY54238.1| cytochrome O ubiquinol oxidase subunit III [Vibrio sp. Ex25] Length = 200 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 121/182 (66%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL N AGP D+F++ +FV T++LL SS++ Sbjct: 20 NKLFGFWVYLMSDCVLFATLFATYAVLSSNSIAGPTGKDIFELPFVFVETMLLLFSSITF 79 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F ++A + W+LVT FG+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 80 GFGIIAMKRNN-VAGLKRWMLVTFAFGLGFICMEVYEFHHLIEEGYGPQTSAFLSAFFTL 138 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+G Sbjct: 139 VGTHGLHVTFGLIWLAVAYHQLSTKGLNDNMAMRFNCLSLFWHFLDIVWICVFTIVYLLG 198 Query: 209 VV 210 V+ Sbjct: 199 VM 200 >gi|209886974|ref|YP_002290837.1| cytochrome c oxidase subunit III [Ophiophagus hannah] gi|194739383|gb|ACF94342.1| cytochrome c oxidase subunit III [Ophiophagus hannah] Length = 261 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I+ + Sbjct: 66 AYQGHHTNGVQKNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L +T G+ F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHTMMKGNKKEATYALAITISLGLYFTALQLSEYQ--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLH G +L V +++++ + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHAMIGTSFLMVCIVRLIHSHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYISVYWWG 260 >gi|258510523|ref|YP_003183957.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477249|gb|ACV57568.1| cytochrome c oxidase subunit III [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 202 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 82/178 (46%), Positives = 118/178 (66%), Gaps = 1/178 (0%) Query: 33 GFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFAM 92 GFW++L +D L+F F TY VL + GP PI +FDI G + T LL SS + A Sbjct: 24 GFWVFLATDMLLFGCLFATYLVLRTHTDGGPTPIQIFDIPGFTLETFFLLTSSFTGGIAT 83 Query: 93 LASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGLH 152 A + R +TVSW+LVT FG+ FI++E EFAH +++ A RSAFLS+FF LVG H Sbjct: 84 WAMRSGRQK-QTVSWMLVTMMFGLAFILLEATEFAHDVTVGATIGRSAFLSAFFTLVGTH 142 Query: 153 GLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 G HV GL+W+F+ ++Q+LK G+ R++ ++++WHFLD++W+ +F+ VYL GVV Sbjct: 143 GSHVSIGLVWMFLTMLQVLKHGITPQTARKVFVVNLYWHFLDVVWVFIFTVVYLSGVV 200 >gi|220920311|ref|YP_002495612.1| cytochrome c oxidase subunit III [Methylobacterium nodulans ORS 2060] gi|219944917|gb|ACL55309.1| cytochrome c oxidase subunit III [Methylobacterium nodulans ORS 2060] Length = 288 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 14 LFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------------- 60 + + V G +++ S+ + F +F Y A Sbjct: 72 VHEANTGDHTRVVQLHHRYGMMMFIASEVMFFVAWFWAYFDAALYAAEPIQASRLEFTGG 131 Query: 61 -AGPAPIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFI 119 P ++ FD + + ++LL+S + + L +T G++F Sbjct: 132 TWPPKGVEAFDPWHLPLLNTLILLTSGTTITWAHHALLNNDRKGLKYGLWLTIILGVLFS 191 Query: 120 IMEIYEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN 179 ++ YE+AH S + ++FF G HG HV G I+L V + + Sbjct: 192 CVQGYEYAH---AHFGFSGSIYSATFFMATGFHGAHVIIGTIFLSVCLYRAYLGHFTPRQ 248 Query: 180 QRRLICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +FS +Y+ G Sbjct: 249 HLGFEFAAWYWHFVDVVWLFLFSAIYVWG 277 >gi|319654011|ref|ZP_08008104.1| cytochrome c oxidase subunit III [Bacillus sp. 2_A_57_CT2] gi|317394333|gb|EFV75078.1| cytochrome c oxidase subunit III [Bacillus sp. 2_A_57_CT2] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 3/197 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPI--DVFDISG 73 + + + ++ +LGFW +L + ++FA F TY L G P+ ++F + Sbjct: 12 WPTSPERATLEAKNKFLGFWFFLGGETVLFASLFATYLALKNKVPNGDHPLTNELFSMEI 71 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 +FV+T++LL+SSL+ AM K WL +T G+ F+ +EIYEF Sbjct: 72 VFVATMLLLVSSLTSVCAMYHMKNFNFK-KMQLWLGITVLLGVAFLGLEIYEFTEYFHKG 130 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 SAF S+F+ LVG HG HV FGL+W+ L+++ ++GL N + S++WHF+ Sbjct: 131 HTFTSSAFGSAFYVLVGFHGAHVAFGLLWIVTLMVRNARRGLNLYNAPKFYVASLYWHFI 190 Query: 194 DLIWICVFSFVYLMGVV 210 D++W+ +F+ VYLMG++ Sbjct: 191 DVVWVFIFTVVYLMGMI 207 >gi|226310781|ref|YP_002770675.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599] gi|226093729|dbj|BAH42171.1| quinol oxidase polypeptide III [Brevibacillus brevis NBRC 100599] Length = 202 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 74/179 (41%), Positives = 120/179 (67%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI++++DC++F F TYAV+ ++A GP ++F + G+ ST +LL SS + A Sbjct: 25 LGFWIFVVTDCVLFGTLFATYAVMMNSFAGGPTGQELFQLPGVIASTFILLTSSFTSGLA 84 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +LA K + + + WL VT G+ F+++E+ EF HL+S A S + S+F+ LVG Sbjct: 85 VLA-MNKGNVKQLIGWLAVTGLLGLSFVVLEVTEFMHLMSEGATMATSGYWSAFYTLVGT 143 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG+HV GL W+ L+IQ+ ++G+ + +R++ S++WHFLD++WI +F+ VYLMGV+ Sbjct: 144 HGVHVTVGLFWMTALMIQLKRRGISAVTRRKITNFSLYWHFLDVVWIFLFTVVYLMGVM 202 >gi|23098894|ref|NP_692360.1| cytochrome c oxidase subunit III [Oceanobacillus iheyensis HTE831] gi|22777121|dbj|BAC13395.1| cytochrome c oxidase subunit III (aa3 type) [Oceanobacillus iheyensis HTE831] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 117/195 (60%), Gaps = 2/195 (1%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFV 76 +D ++ ++ +LG WI+L + ++FA F TY L + A GP+ D++ + +F+ Sbjct: 14 TQDPSKATMEGKHKFLGLWIFLGGETVLFACLFGTYLALKDSTAGGPSTHDLYGLELVFL 73 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME-AV 135 T++LL SSL+ +A+ K W+ +TA G+ F+ EIYEFAH I Sbjct: 74 MTVLLLTSSLTSVYAIYHMKNNDFK-KMQLWMGITAALGLAFLGFEIYEFAHYIHDYGFT 132 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 + SAF S+F+ALVG HG HV FGL W+ L+++ K+GL N + +++WHF+D+ Sbjct: 133 FRSSAFGSAFYALVGFHGGHVVFGLSWIITLMVRNAKRGLNLYNAPKYNTFALYWHFIDV 192 Query: 196 IWICVFSFVYLMGVV 210 +W+ +F+ VYLMG+V Sbjct: 193 VWVFIFTVVYLMGMV 207 >gi|117922464|ref|YP_871656.1| cytochrome c oxidase subunit III [Shewanella sp. ANA-3] gi|117614796|gb|ABK50250.1| cytochrome c oxidase, subunit III [Shewanella sp. ANA-3] Length = 206 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 5 KIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA 64 + + + + ++ E T GFW+YLM+DC++FA F TYAVL N G + Sbjct: 2 SVAIPADLEVAHAEEHHEHHDTGGNTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVS 61 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 D+F++ + + T LLLSS++ FA L A + T++WL +T G +FI ME+Y Sbjct: 62 GKDIFELDFVLIETAALLLSSITYGFA-LIFAKRHNKAATLTWLAITFALGCVFIGMEVY 120 Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184 EF HLI PQRSAFLSSFF LVG+HGLHV GLIW+ +++I++ K GL + + RL Sbjct: 121 EFHHLIEHGNGPQRSAFLSSFFTLVGMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLS 180 Query: 185 CLSMFWHFLDLIWICVFSFVYLMGVV 210 CLS+FWHFLD++WICVF+ VYL+G + Sbjct: 181 CLSLFWHFLDIVWICVFTVVYLLGAL 206 >gi|308173456|ref|YP_003920161.1| cytochrome caa3 oxidase subunit III [Bacillus amyloliquefaciens DSM 7] gi|307606320|emb|CBI42691.1| cytochrome caa3 oxidase (subunit III) [Bacillus amyloliquefaciens DSM 7] gi|328553615|gb|AEB24107.1| cytochrome c oxidase, subunit III [Bacillus amyloliquefaciens TA208] gi|328911591|gb|AEB63187.1| cytochrome caa3 oxidase (subunit III) [Bacillus amyloliquefaciens LL3] Length = 207 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 113/188 (60%), Gaps = 2/188 (1%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LGFW++L + ++FA F T+ L ++ A GP+ D+F++ +F++T++LL Sbjct: 20 TLEGKNKFLGFWLFLGGETVLFASLFATFLALRESKAGGPSTADMFELPIVFIATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME-AVPQRSAFL 142 SSL+ +AM K WLL+T G F+ +EIYEF H SA Sbjct: 80 SSLTSVYAMYHMKNFSFK-KMQVWLLITVLLGAGFLGVEIYEFKHYTHEFGFTITSSALG 138 Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202 S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 139 SAFYTLVGTHGAHVAFGLLWISALMIRNAKRGLSLYNAPKYYVASLYWHFIDVVWVFIFT 198 Query: 203 FVYLMGVV 210 VYLMG+V Sbjct: 199 VVYLMGMV 206 >gi|76780596|emb|CAD97445.1| cytochrome oxidase subunit III [Posidonia oceanica] Length = 265 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFF--VTYAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + F ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFALFRASFHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHALLAGKEK-RAVYALVATVLLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F VY G + Sbjct: 247 FVDVVRLFPFVSVYWWGGI 265 >gi|39933913|ref|NP_946189.1| cytochrome c oxidase subunit III [Rhodopseudomonas palustris CGA009] gi|192289332|ref|YP_001989937.1| cytochrome C oxidase subunit III [Rhodopseudomonas palustris TIE-1] gi|39647760|emb|CAE26280.1| cytochrome c oxidase subunit III [Rhodopseudomonas palustris CGA009] gi|192283081|gb|ACE99461.1| cytochrome c oxidase subunit III [Rhodopseudomonas palustris TIE-1] Length = 284 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 17/205 (8%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA--------------AGP 63 + V G +++ S+ + F +F Y A P Sbjct: 73 YQHDHTRVVQLSHRYGMILFIASEVMFFVAWFWAYFNAALFPADPVHATREALFGGVWPP 132 Query: 64 APIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEI 123 I+ FD + + ++LL+S + + + L+ T G F +++ Sbjct: 133 KGIETFDPWHLPLLNTLILLTSGTTVTWAHHALLQNDRKGLKQGLICTVLLGATFSCVQV 192 Query: 124 YEFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRL 183 YE++H + + ++FF G HG HV G I+L V +I+ Sbjct: 193 YEYSH---ATFSFAGNIYGATFFMATGFHGFHVLVGTIFLLVCLIRAYAGHFTPKQHLGF 249 Query: 184 ICLSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 250 EFAAWYWHFVDVVWLFLFVCIYVWG 274 >gi|218453778|gb|ACK76656.1| cytochrome oxidase subunit III [Peromyscus maniculatus] Length = 253 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 58 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 117 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 118 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRNNMNQALIITILLGIYFTILQAS 171 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 172 EYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLMVCLLRQLKYHFTSKHHFGFEAAA 231 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 232 WYWHFVDVVWLFLYVSIYWWG 252 >gi|164421146|ref|YP_001648548.1| cytochrome c oxidase subunit III [Chondrilla aff. nucula CHOND] gi|158668107|gb|ABW76568.1| cytochrome c oxidase subunit 3 [Chondrilla aff. nucula CHOND] Length = 261 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA------AGPAPIDVFDIS 72 + + G G ++++S+ +F F + A P ++ + Sbjct: 68 QGHHTFIVKQGLKYGMILFILSEVCLFFSLFWAFFHSSLAPAIEVGAIWPPRGVNPLNPW 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LLSS + + + + L +T G+ F ++ E+ Sbjct: 128 SVPLLNTAVLLSSGATVTWAHHAIISGKRKEXILGLFITVLLGIGFTGLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S+FF G HG HV G +L V + +++ + + +WHF Sbjct: 185 PFTISDSVYGSTFFVTTGAHGGHVLIGSTFLLVCLFRLISHQFTRHHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ +F F+Y G Sbjct: 245 VDVVWLFLFIFMYWWG 260 >gi|218453800|gb|ACK76667.1| cytochrome oxidase subunit III [Peromyscus polionotus subgriseus] Length = 253 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 58 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 117 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 118 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 171 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 172 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 231 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 232 WYWHFVDVVWLFLYVSIYWWG 252 >gi|57281929|emb|CAD19451.1| cytochrome oxidase subunit 3 [Hyacinthus sp. CQ-2001] gi|57281937|emb|CAD19455.1| cytochrome oxidase subunit 3 [Triteleia laxa] Length = 265 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T++L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTLILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|117079|sp|P14853|COX3_SOYBN RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III Length = 265 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + V G G +++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGSIPFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPLGIWVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +LL S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILLSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ +F +Y G + Sbjct: 247 FVDVVWLFLFVSIYWWGGI 265 >gi|207081101|gb|ACI22832.1| cytochrome c oxidase subunit III [Peromyscus leucopus] gi|296492436|gb|ADH29741.1| cytochrome c oxidase subunit III [Peromyscus leucopus] gi|296492439|gb|ADH29743.1| cytochrome c oxidase subunit III [Peromyscus leucopus] Length = 255 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 60 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 119 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 120 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 173 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 174 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLLRQLKYHFTSKHHFGFEAAA 233 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 234 WYWHFVDVVWLFLYVSIYWWG 254 >gi|157692164|ref|YP_001486626.1| cytochrome-c oxidase subunit III [Bacillus pumilus SAFR-032] gi|194014225|ref|ZP_03052842.1| cytochrome c oxidase subunit 3 (cytochrome c oxidasepolypeptide III) (cytochrome aa3 subunit 3) ( subunit 3)(Oxidase aa(3) subunit 3) [Bacillus pumilus ATCC 7061] gi|157680922|gb|ABV62066.1| cytochrome-c oxidase subunit III [Bacillus pumilus SAFR-032] gi|194013251|gb|EDW22816.1| cytochrome c oxidase subunit 3 (cytochrome c oxidasepolypeptide III) (cytochrome aa3 subunit 3) ( subunit 3)(Oxidase aa(3) subunit 3) [Bacillus pumilus ATCC 7061] Length = 206 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 103/187 (55%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ ++GFW++L + ++FA F TY L + A G D+FD++ +F++T++LL Sbjct: 19 TLEGKNKFVGFWLFLGGETVLFASLFATYLALKNSNAGGAKTTDMFDLTLVFIATMLLLT 78 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +AM + + + + ++ + + SA S Sbjct: 79 SSLTSVYAMYHMKNFAFKKMQLWLGVTVLLGASFLGVEIYEFYHYVHAYDFTITSSALGS 138 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 SF+ LVG HG HV FGL W+ L+I+ +++GL N + S++WHF+D++W+ +F+ Sbjct: 139 SFYTLVGTHGAHVAFGLCWITALMIRNMRRGLDLYNAPKYYVASLYWHFIDVVWVFIFTV 198 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 199 VYLMGMV 205 >gi|229083935|ref|ZP_04216238.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-44] gi|228699370|gb|EEL52052.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-44] Length = 200 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P D+F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPADLFEVKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W L T G F+ EI EF + A Q SAFLS FF L+G Sbjct: 82 IHEMRKNNQK-AMLGWFLFTLLLGAGFLFFEIEEFIMYVGEGATLQTSAFLSGFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+WI +++ VYL G+V Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWIFIYTLVYLNGMV 199 >gi|226314594|ref|YP_002774490.1| cytochrome c oxidase polypeptide III [Brevibacillus brevis NBRC 100599] gi|226097544|dbj|BAH45986.1| cytochrome c oxidase polypeptide III [Brevibacillus brevis NBRC 100599] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 111/192 (57%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ LGFW++L + ++F F T+ L GP +FD++ + V+T Sbjct: 13 EPEKATLEGKNKVLGFWLFLGGETVLFGSLFATFIALRDQANGGPTSQALFDMNLVAVAT 72 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL SS++ A LA K L K WL +T G+ F+ +EIYEF H ++ Sbjct: 73 LLLLTSSMTSVMATLALHRKDLK-KIQLWLTITVILGLGFLALEIYEFVHYVNEGLKMST 131 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF S+F+ LVG HG HV FG+ W+ +L + KKGL + ++WHF+D++W+ Sbjct: 132 SAFSSAFYTLVGFHGAHVAFGICWITLLQLSATKKGLTVVTAPKFYLACLYWHFIDVVWV 191 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG++ Sbjct: 192 FIFTVVYLMGMI 203 >gi|57281933|emb|CAD19453.1| cytochrome oxidase subunit 3 [Ipheion uniflorum] gi|57281935|emb|CAD19454.1| cytochrome oxidase subunit 3 [Nothoscordum inodorum] Length = 265 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|207081095|gb|ACI22828.1| cytochrome c oxidase subunit III [Peromyscus maniculatus bairdii] gi|296492433|gb|ADH29739.1| cytochrome c oxidase subunit III [Peromyscus maniculatus] Length = 255 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 60 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 119 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 120 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRNNMNQALIITILLGIYFTILQAS 173 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 174 EYFETPFSISDGIYGSTFFMATGFHGLHVIIGTTFLMVCLLRQLKYHFTSKHHFGFEAAA 233 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 234 WYWHFVDVVWLFLYVSIYWWG 254 >gi|218453802|gb|ACK76668.1| cytochrome oxidase subunit III [Peromyscus polionotus subgriseus] Length = 253 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G AG P++ Sbjct: 58 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPAGITPLN 117 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 118 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 171 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 172 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 231 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 232 WYWHFVDVVWLFLYVSIYWWG 252 >gi|152974415|ref|YP_001373932.1| cytochrome aa3 quinol oxidase subunit III [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023167|gb|ABS20937.1| Cytochrome aa3 quinol oxidase subunit III [Bacillus cytotoxicus NVH 391-98] Length = 200 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A Sbjct: 22 LGFWIFLGAEIVLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIA 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + + W + T G F+ EI EF + A Q S FLS FF L+G Sbjct: 82 IHEMRRHN-KNAMLGWFIFTLLLGAGFLFFEIEEFMTYAAEGATIQTSGFLSGFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLD++WI +++ VYL G+V Sbjct: 141 HGAHVTAGIIWAICVIIQILKRGLTPITARKVFIISLYWHFLDVVWIFIYTLVYLNGMV 199 >gi|297818670|ref|XP_002877218.1| cytochrome c oxidase subunit 3 [Arabidopsis lyrata subsp. lyrata] gi|297323056|gb|EFH53477.1| cytochrome c oxidase subunit 3 [Arabidopsis lyrata subsp. lyrata] Length = 265 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAV--FFVTYAVLGKNYAAG----PAPIDVFDIS 72 + + V G G ++++S+ + F + +++ L G P I V D Sbjct: 71 EGHHTKVVQLGPRYGSILFIVSEVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ +F +Y G + Sbjct: 247 FVDVVWLFLFVSIYWWGGI 265 >gi|32526835|ref|NP_871767.1| cytochrome c oxidase subunit III [Urotrichus talpoides] gi|32469186|dbj|BAC78880.1| cytochrome oxidase subunit 3 [Urotrichus talpoides] Length = 261 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVF 69 + + G G ++++S+ + T+ + G AG P++ Sbjct: 68 QGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGIHPLNPL 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S +S ++A + H + L +T G+ F I++ E+ Sbjct: 128 EVP--LLNTSVLLASGVSITWAHHSLMEGNRKH-MIQALFITIALGVYFTILQAAEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V I+ LK S + + + Sbjct: 182 YEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLTVCFIRQLKYHFTSKHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|87198940|ref|YP_496197.1| cytochrome c oxidase, subunit III [Novosphingobium aromaticivorans DSM 12444] gi|87134621|gb|ABD25363.1| cytochrome c oxidase, subunit III [Novosphingobium aromaticivorans DSM 12444] Length = 273 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 15/203 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA-----------VLGKNYAAGPAP 65 + V G +++ S+ + F +F + +G + Sbjct: 68 AHAGDHTPVVQLHQRYGMILFIASEVMFFVGWFWAFFDFSLFPSTIAETVGGQWPPKAIE 127 Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125 + ++T++LL S + ++A A L T G+IF +++ YE Sbjct: 128 AVMDPFDLPLLNTLILLCSGTTLTWAHHALI-HGDREGLKKGLWATIILGVIFSMIQAYE 186 Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185 +AH + + S+F+ G HG HV G I+L V +I+ K Sbjct: 187 YAH---APFAFGTNTYGSAFYMATGFHGFHVIVGTIFLIVCLIRAYKGHFTPRQHFGFEA 243 Query: 186 LSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 244 AAWYWHFVDVVWLFLFVAIYVWG 266 >gi|114049400|ref|YP_739950.1| cytochrome c oxidase subunit III [Shewanella sp. MR-7] gi|113890842|gb|ABI44893.1| cytochrome c oxidase, subunit III [Shewanella sp. MR-7] Length = 206 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 5 KIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA 64 + + + + ++ E T GFW+YLM+DC++FA F TYAVL N G + Sbjct: 2 SVAIPADLEVAHAEEHHEHHDTGGNTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVS 61 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 D+F++ + + T LLLSS++ FA L A + T++WL +T G +FI ME+Y Sbjct: 62 GKDIFELDFVLIETAALLLSSITYGFA-LIFAKRHNRLATLTWLAITFALGCVFIGMEVY 120 Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184 EF HLI PQRSAFLSSFF LVG+HGLHV GLIW+ +++I++ K GL + + RL Sbjct: 121 EFHHLIEHGNGPQRSAFLSSFFTLVGMHGLHVTAGLIWMAIMMIEVAKTGLGNRSITRLS 180 Query: 185 CLSMFWHFLDLIWICVFSFVYLMGVV 210 CLS+FWHFLD++WICVF+ VYL+G + Sbjct: 181 CLSLFWHFLDIVWICVFTVVYLLGAL 206 >gi|262369761|ref|ZP_06063089.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter johnsonii SH046] gi|262315829|gb|EEY96868.1| cytochrome o ubiquinol oxidase subunit III [Acinetobacter johnsonii SH046] Length = 206 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 93/197 (47%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGI 74 + D+ D D T GFW YLMSD ++F F+ +AVL + G P+ ++F S Sbjct: 10 HGHDEHHQHDDTDITVFGFWTYLMSDLILFGTLFIAFAVLSSHVPMGTPSAKELFGESLG 69 Query: 75 FVSTIVLLLSSLSCSFAMLASATKR-LIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 FV T L S +F A + +++ ++WL +T FG FI ME+YEF HL+ Sbjct: 70 FVLTETFALLISSVTFGFAVLAAYKKNVNQVLTWLAITWLFGASFIGMELYEFNHLVHAG 129 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 P SAFLSSFF LVG HG+HV GL+W+ +L+IQI K GL N RRL CLS+FWHFL Sbjct: 130 HGPSVSAFLSSFFTLVGTHGIHVTSGLVWMIILMIQIKKNGLTLPNTRRLACLSLFWHFL 189 Query: 194 DLIWICVFSFVYLMGVV 210 D++WICVFS VYLMGV+ Sbjct: 190 DIVWICVFSVVYLMGVL 206 >gi|86751681|ref|YP_488177.1| cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2] gi|86574709|gb|ABD09266.1| Cytochrome c oxidase, subunit III [Rhodopseudomonas palustris HaA2] Length = 284 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 17/203 (8%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLG--------------KNYAAGPAP 65 + V G +++ S+ + F +F Y P Sbjct: 75 GDHTRVVQISHRYGMILFIASEVMFFVAWFWAYFNAALFPGDPVHATREALFGGVWPPKG 134 Query: 66 IDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYE 125 I+ FD + + ++LL+S + + L++T G F +++YE Sbjct: 135 IETFDPWHLPLLNTLILLTSGTTVTWAHHALLHNDRKGVKQALILTVLLGAAFSCVQVYE 194 Query: 126 FAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLIC 185 ++H + + ++FF G HG HV G I+L V +I++ K Sbjct: 195 YSH---AAFSFAGNVYGATFFMATGFHGFHVLVGTIFLLVCLIRVYKGHFTPTQHLGFEF 251 Query: 186 LSMFWHFLDLIWICVFSFVYLMG 208 + +WHF+D++W+ +F +Y+ G Sbjct: 252 AAWYWHFVDVVWLFLFVCIYVWG 274 >gi|296536348|ref|ZP_06898455.1| cytochrome-c oxidase [Roseomonas cervicalis ATCC 49957] gi|296263324|gb|EFH09842.1| cytochrome-c oxidase [Roseomonas cervicalis ATCC 49957] Length = 283 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 11/197 (5%) Query: 22 ESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYA---------AGPAPIDVFDIS 72 + V G G +++ S+ + F FF Y PA I FD Sbjct: 83 HTPVVRLGMRYGMVLFIASEVMFFVAFFWAYFHFALYPEHVSGAAKAIWPPAGIQTFDPF 142 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + ++LL S + + + L +T G+ F + E+A + Sbjct: 143 HLPLLNTLILLLSGCTVTWAHHALLENDRKGMLQGLGLTVLLGLTFTFFQAVEYAE--AP 200 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 A + S FF G HG HV G I+L V + + +WHF Sbjct: 201 FAFHGGGIYPSVFFLATGFHGFHVIVGTIFLAVCWFRARAGHFTPQRHFGFEAAAWYWHF 260 Query: 193 LDLIWICVFSFVYLMGV 209 +D++W+ +F VY++G Sbjct: 261 VDVVWLFLFVCVYVLGA 277 >gi|107028751|ref|YP_625846.1| cytochrome c oxidase, subunit III [Burkholderia cenocepacia AU 1054] gi|116690090|ref|YP_835713.1| cytochrome c oxidase, subunit III [Burkholderia cenocepacia HI2424] gi|170733424|ref|YP_001765371.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia cenocepacia MC0-3] gi|105897915|gb|ABF80873.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia cenocepacia AU 1054] gi|116648179|gb|ABK08820.1| cytochrome bo3 quinol oxidase subunit 3 [Burkholderia cenocepacia HI2424] gi|169816666|gb|ACA91249.1| cytochrome o ubiquinol oxidase, subunit III [Burkholderia cenocepacia MC0-3] Length = 202 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 100/195 (51%), Positives = 130/195 (66%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA G ++FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ ++ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YQQRRGALLAWLAVTFVLGAAFLTMELREFSHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVLRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|76780580|emb|CAD92020.1| cytochrome oxidase subunit 3 [Chamaescilla sp. Chase 2208] Length = 265 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGILVLDPR 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 KIPFLNTPILPSSGAAVTWAYHAILAGKEK-RAVYALIATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|153833148|ref|ZP_01985815.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio harveyi HY01] gi|163800403|ref|ZP_02194304.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio sp. AND4] gi|148870578|gb|EDL69486.1| cytOchrome o ubiquinol oxidase, subunit III [Vibrio harveyi HY01] gi|159175846|gb|EDP60640.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio sp. AND4] Length = 199 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 119/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ Sbjct: 19 NKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITF 78 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F M+A K + WL VT G+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 79 GFGMIAMKRKD-VAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTL 137 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+G Sbjct: 138 VGTHGLHVTFGLIWLAVGYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLG 197 Query: 209 VV 210 V+ Sbjct: 198 VM 199 >gi|145223396|ref|YP_001134074.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK] gi|145215882|gb|ABP45286.1| cytochrome c oxidase, subunit III [Mycobacterium gilvum PYR-GCK] Length = 197 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 1/176 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 +G ++L S+ + FA F Y P P +++ T++L+ SS +C Sbjct: 22 VGTIVWLSSELMFFAGLFAMYFTARAQADEWPPPPTELNLALAVPVTLILIASSFTCQMG 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + A+ + W +VT G+IF++ + YE+ L+ SA+ S F+ G Sbjct: 82 VFAAERGD-VFGLRRWYVVTLLMGLIFVLGQGYEYISLVREGTTIAGSAYGSVFYLTTGF 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLM 207 HGLHV GL+ +L+I+ I +S +WHF+D++WI +F+ +Y + Sbjct: 141 HGLHVIGGLVAFILLLIRTRMSKFTPAQATAAIVVSYYWHFVDIVWIALFATIYFV 196 >gi|237869105|ref|YP_002907432.1| cytochrome c oxidase subunit III [Chitala blanci] gi|237648802|dbj|BAH58902.1| cytochrome c oxidase subunit III [Chitala blanci] Length = 261 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 81/198 (40%), Gaps = 15/198 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVFD 70 + G LG +++ S+ + T + G G AP+D F+ Sbjct: 69 GHHTPPVQKGLRLGMILFITSEVFFFLGFFWAFFHSSLAPTPELGGCWPPTGIAPLDPFE 128 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + ++T VLL S ++ ++A + L +T G F ++ E+ Sbjct: 129 VP--LLNTAVLLASGVTVTWAHHSLMEGARKEAV-QSLALTILLGCYFTALQAMEYH--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + S+FF G HGLHV G +L V +++ +K S + + +W Sbjct: 183 EAPFTIADGVYGSTFFVATGFHGLHVIVGTTFLTVCLLRQIKYHFTSQHHFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ +Y G Sbjct: 243 HFVDVVWLFLYVSIYWWG 260 >gi|311068008|ref|YP_003972931.1| cytochrome c oxidase, subunit III [Bacillus atrophaeus 1942] gi|310868525|gb|ADP32000.1| cytochrome c oxidase, subunit III [Bacillus atrophaeus 1942] Length = 207 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 61/187 (32%), Positives = 101/187 (54%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LGFW++L + ++FA F T+ L + A+ P ++FD+S +F++T++LL Sbjct: 20 TLEGKNKFLGFWLFLGGETVLFASLFATFLALRNSNASDPPTSEMFDLSLVFIATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLS 143 SSL+ +AM + LL + + SA S Sbjct: 80 SSLTSVYAMYHMKNFAFGKMQLWLLLTLLLGAGFLGVEIYEFKHYTHEFGFTITSSALGS 139 Query: 144 SFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSF 203 SF+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 140 SFYTLVGTHGAHVAFGLLWISALMIRNAKRGLSLYNAPKFYVASLYWHFIDVVWVFIFTV 199 Query: 204 VYLMGVV 210 VYLMG+V Sbjct: 200 VYLMGMV 206 >gi|228989832|ref|ZP_04149812.1| Quinol oxidase subunit 3 [Bacillus pseudomycoides DSM 12442] gi|228996023|ref|ZP_04155678.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock3-17] gi|229003639|ref|ZP_04161454.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock1-4] gi|228757605|gb|EEM06835.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock1-4] gi|228763719|gb|EEM12611.1| Quinol oxidase subunit 3 [Bacillus mycoides Rock3-17] gi|228769979|gb|EEM18562.1| Quinol oxidase subunit 3 [Bacillus pseudomycoides DSM 12442] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C A Sbjct: 22 LGFWIFLGAEIVLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIA 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W + T G F+ E+ EF ++ A Q S FLS FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFIFTLILGAGFLFFEVEEFMAYVAEGATIQTSGFLSGFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW +VIQILK+GL R++ +S++WHFLD++WI +++ VYL G+V Sbjct: 141 HGAHVTAGIIWATCVVIQILKRGLTPVTARKVFIISLYWHFLDVVWIFIYTLVYLNGMV 199 >gi|3121891|sp|Q36952|COX3_AEGCO RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III gi|1213424|gb|AAA91210.1| cytochrome c oxidase subunit III [Aegilops columnaris] gi|1213426|gb|AAA91211.1| cytochrome c oxidase subunit III [Aegilops columnaris] Length = 265 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDIS 72 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 ++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPLLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L V I+ + + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGLMTKKHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|237869119|ref|YP_002907445.1| cytochrome c oxidase subunit III [Chitala lopis] gi|237648816|dbj|BAH58915.1| cytochrome c oxidase subunit III [Chitala lopis] Length = 261 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 15/198 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVFD 70 + G G +++ S+ + T + G G AP+D F+ Sbjct: 69 GHHTPPVQKGLRFGMILFITSEVFFFLGFFWAFFHSSLAPTPELGGCWPPTGIAPLDPFE 128 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + ++T VLL S ++ ++A + L +T G F ++ E+ Sbjct: 129 VP--LLNTAVLLASGVTVTWAHHSLMEGARKEAV-QSLALTILLGCYFTALQAMEY---Y 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + S+FF G HGLHV G +L + +++ +K S + + +W Sbjct: 183 EAPFTIADGVYGSTFFVATGFHGLHVIIGTTFLAICLLRQIKYHFTSQHHFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ +Y G Sbjct: 243 HFVDVVWLFLYVSIYWWG 260 >gi|304405377|ref|ZP_07387036.1| Cytochrome-c oxidase [Paenibacillus curdlanolyticus YK9] gi|304345416|gb|EFM11251.1| Cytochrome-c oxidase [Paenibacillus curdlanolyticus YK9] Length = 206 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 2/194 (1%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIFV 76 + +++ ++ LGFW++L + ++F F + L G P ++F++S + + Sbjct: 13 HEPEKATLEGRNKVLGFWLFLGGETVLFGTLFSAFLALRDKVGEGNPTANELFNLSTVAI 72 Query: 77 STIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVP 136 +T +LL SSL+ FA+ A + + + + WL +T FG+ F+ +EIYEF + Sbjct: 73 ATFILLTSSLTSVFAIQAMHSGK-KNAMLGWLAITVLFGLGFLGLEIYEFYEYVHEGHGF 131 Query: 137 QRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLI 196 SAF SSF+ LVG HG HV FG+IW+ +L+ Q++KKGL +L M+WHF+D++ Sbjct: 132 TTSAFSSSFYTLVGFHGAHVAFGVIWISLLIGQVMKKGLNVVTAPKLYVAGMYWHFIDVV 191 Query: 197 WICVFSFVYLMGVV 210 W+ +F+ VYLMG V Sbjct: 192 WVFIFTVVYLMGKV 205 >gi|228913389|ref|ZP_04077022.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846298|gb|EEM91317.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W ++T G F+ EI EF I A Q SAFLS FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|270301120|gb|ACZ59706.2| cytochrome c oxidase subunit III [Peromyscus polionotus allophrys] Length = 242 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 47 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 106 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 107 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 160 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 161 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 220 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 221 WYWHFVDVVWLFLYVSIYWWG 241 >gi|57282255|emb|CAD32356.1| cytochrome oxidase subunit 3 [Behnia reticulata] Length = 265 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 +F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EILFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|30018878|ref|NP_830509.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus cereus ATCC 14579] gi|30260851|ref|NP_843228.1| quinol oxidase, subunit III [Bacillus anthracis str. Ames] gi|42779848|ref|NP_977095.1| quinol oxidase, subunit III [Bacillus cereus ATCC 10987] gi|47525982|ref|YP_017331.1| quinol oxidase subunit III [Bacillus anthracis str. 'Ames Ancestor'] gi|49183692|ref|YP_026944.1| quinol oxidase subunit III [Bacillus anthracis str. Sterne] gi|49480265|ref|YP_034957.1| quinol oxidase subunit III (cytochrome c oxidase subunit III) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52144610|ref|YP_082218.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III) [Bacillus cereus E33L] gi|65318129|ref|ZP_00391088.1| COG1845: Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Bacillus anthracis str. A2012] gi|118476379|ref|YP_893530.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III) [Bacillus thuringiensis str. Al Hakam] gi|165872914|ref|ZP_02217538.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0488] gi|167635136|ref|ZP_02393452.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0442] gi|167641848|ref|ZP_02400088.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0193] gi|170689426|ref|ZP_02880617.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0465] gi|170709008|ref|ZP_02899439.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0389] gi|177652799|ref|ZP_02935172.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0174] gi|190568584|ref|ZP_03021490.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis Tsiankovskii-I] gi|196035750|ref|ZP_03103153.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus W] gi|196047115|ref|ZP_03114333.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus 03BB108] gi|206968469|ref|ZP_03229425.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH1134] gi|206977812|ref|ZP_03238702.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus H3081.97] gi|217958285|ref|YP_002336831.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH187] gi|218232838|ref|YP_002365495.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus B4264] gi|222094456|ref|YP_002528515.1| quinol oxidase, subunit iii (cytochrome c oxidase, subunit iii) [Bacillus cereus Q1] gi|225862679|ref|YP_002748057.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus 03BB102] gi|227816428|ref|YP_002816437.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. CDC 684] gi|228932130|ref|ZP_04095021.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228957119|ref|ZP_04118889.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228983900|ref|ZP_04144093.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229042562|ref|ZP_04190305.1| Quinol oxidase subunit 3 [Bacillus cereus AH676] gi|229108308|ref|ZP_04237927.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-15] gi|229126127|ref|ZP_04255148.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-Cer4] gi|229143425|ref|ZP_04271854.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST24] gi|229188907|ref|ZP_04315940.1| Quinol oxidase subunit 3 [Bacillus cereus ATCC 10876] gi|229601533|ref|YP_002865296.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0248] gi|254684222|ref|ZP_05148082.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. CNEVA-9066] gi|254725884|ref|ZP_05187666.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A1055] gi|254734416|ref|ZP_05192129.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. Western North America USA6153] gi|254742102|ref|ZP_05199789.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. Kruger B] gi|254755776|ref|ZP_05207809.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. Vollum] gi|254762358|ref|ZP_05214202.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. Australia 94] gi|296501451|ref|YP_003663151.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus thuringiensis BMB171] gi|301052350|ref|YP_003790561.1| quinol oxidase subunit III [Bacillus anthracis CI] gi|29894420|gb|AAP07710.1| Cytochrome aa3 quinol oxidase polypeptide III [Bacillus cereus ATCC 14579] gi|30254300|gb|AAP24714.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. Ames] gi|42735765|gb|AAS39703.1| quinol oxidase, subunit III [Bacillus cereus ATCC 10987] gi|47501130|gb|AAT29806.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. 'Ames Ancestor'] gi|49177619|gb|AAT52995.1| quinol oxidase, subunit III [Bacillus anthracis str. Sterne] gi|49331821|gb|AAT62467.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978079|gb|AAU19629.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III) [Bacillus cereus E33L] gi|118415604|gb|ABK84023.1| cytochrome aa3 quinol oxidase subunit 3 [Bacillus thuringiensis str. Al Hakam] gi|164711327|gb|EDR16880.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0488] gi|167510196|gb|EDR85602.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0193] gi|167529395|gb|EDR92146.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0442] gi|170126110|gb|EDS95006.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0389] gi|170666588|gb|EDT17360.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0465] gi|172081833|gb|EDT66902.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0174] gi|190560378|gb|EDV14357.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis Tsiankovskii-I] gi|195991717|gb|EDX55682.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus W] gi|196022096|gb|EDX60785.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus 03BB108] gi|206737389|gb|EDZ54536.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH1134] gi|206744009|gb|EDZ55426.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus H3081.97] gi|217062978|gb|ACJ77228.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus AH187] gi|218160795|gb|ACK60787.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus B4264] gi|221238513|gb|ACM11223.1| quinol oxidase, subunit III (cytochrome c oxidase, subunit III) [Bacillus cereus Q1] gi|225788852|gb|ACO29069.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus 03BB102] gi|227007623|gb|ACP17366.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. CDC 684] gi|228594612|gb|EEK52398.1| Quinol oxidase subunit 3 [Bacillus cereus ATCC 10876] gi|228640053|gb|EEK96454.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-ST24] gi|228657334|gb|EEL13151.1| Quinol oxidase subunit 3 [Bacillus cereus BDRD-Cer4] gi|228675145|gb|EEL30370.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-15] gi|228726781|gb|EEL77995.1| Quinol oxidase subunit 3 [Bacillus cereus AH676] gi|228775813|gb|EEM24186.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228802566|gb|EEM49413.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228827558|gb|EEM73301.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229265941|gb|ACQ47578.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus anthracis str. A0248] gi|296322503|gb|ADH05431.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus thuringiensis BMB171] gi|300374519|gb|ADK03423.1| quinol oxidase, subunit III [Bacillus cereus biovar anthracis str. CI] gi|324324742|gb|ADY20002.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus thuringiensis serovar finitimus YBT-020] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W ++T G F+ EI EF I A Q SAFLS FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|164420983|ref|YP_001648604.1| cytochrome c oxidase subunit III [Halisarca dujardini] gi|158668137|gb|ABW76596.1| cytochrome c oxidase subunit 3 [Halisarca dujardini] Length = 261 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFDIS 72 + + G G ++++S+ +F F + P ++ + Sbjct: 68 QGHHTFIVKQGLKYGMILFILSEVCLFFSLFWAFFHSSLAPTIEVGAVWPPRGVNPLNPW 127 Query: 73 GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISM 132 + + +LLSS + + ++ L +T G+ F ++ E+ Sbjct: 128 SVPLLNTAVLLSSGATVTWAHHAIISGNRKDAIAGLFLTVLLGIGFTGLQAMEY---YEA 184 Query: 133 EAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHF 192 S + S+FF G HG HV G +L V + +++ + + +WHF Sbjct: 185 PFTISDSVYGSTFFLTTGAHGGHVLIGSTFLLVCLFRLISHQFTRHHHFGFEAAAWYWHF 244 Query: 193 LDLIWICVFSFVYLMG 208 +D++W+ +F F+Y G Sbjct: 245 VDVVWLFLFIFMYWWG 260 >gi|57281943|emb|CAD19458.1| cytochrome oxidase subunit 3 [Danae racemosa] gi|57282227|emb|CAD32342.1| cytochrome oxidase subunit 3 [Ruscus aculeatus] gi|57282241|emb|CAD32349.1| cytochrome oxidase subunit 3 [Ixiolirion tataricum] gi|57282243|emb|CAD32350.1| cytochrome oxidase subunit 3 [Aspidistra elatior] Length = 265 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|83719897|ref|YP_442318.1| cytochrome c oxidase subunit III [Burkholderia thailandensis E264] gi|167619298|ref|ZP_02387929.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis Bt4] gi|257138515|ref|ZP_05586777.1| cytochrome c oxidase subunit III [Burkholderia thailandensis E264] gi|83653722|gb|ABC37785.1| Cytochrome c oxidase subunit III [Burkholderia thailandensis E264] Length = 201 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 5/200 (2%) Query: 12 FSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDI 71 L + + GFW+YLM+DC++FA F T+AVLG +A GP D+FDI Sbjct: 6 MMLDHAASHDHPP---SHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDI 62 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 G+ + T LLLSS++ FAM+ + R WL VT G F+ ME+ EF+HLI+ Sbjct: 63 PGVALETAALLLSSITYGFAMIGAHK-RRRGAVFGWLAVTFVLGAAFLAMELREFSHLIA 121 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG-LISGNQRRLICLSMFW 190 A PQRSAFLSSFF LV HGLHV GL+W+ VLV+Q L++ L + RRL CLS+FW Sbjct: 122 EGAGPQRSAFLSSFFTLVATHGLHVTAGLLWMAVLVVQALRRPELTERDIRRLTCLSLFW 181 Query: 191 HFLDLIWICVFSFVYLMGVV 210 HFLD++WICVFSFVYL V+ Sbjct: 182 HFLDIVWICVFSFVYLASVI 201 >gi|228906454|ref|ZP_04070335.1| Quinol oxidase subunit 3 [Bacillus thuringiensis IBL 200] gi|228975947|ref|ZP_04136468.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977448|ref|ZP_04137842.1| Quinol oxidase subunit 3 [Bacillus thuringiensis Bt407] gi|229028500|ref|ZP_04184620.1| Quinol oxidase subunit 3 [Bacillus cereus AH1271] gi|229095350|ref|ZP_04226342.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-29] gi|229114300|ref|ZP_04243720.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-3] gi|229171484|ref|ZP_04299068.1| Quinol oxidase subunit 3 [Bacillus cereus MM3] gi|228612022|gb|EEK69260.1| Quinol oxidase subunit 3 [Bacillus cereus MM3] gi|228669138|gb|EEL24560.1| Quinol oxidase subunit 3 [Bacillus cereus Rock1-3] gi|228688209|gb|EEL42095.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-29] gi|228732813|gb|EEL83675.1| Quinol oxidase subunit 3 [Bacillus cereus AH1271] gi|228782272|gb|EEM30456.1| Quinol oxidase subunit 3 [Bacillus thuringiensis Bt407] gi|228783783|gb|EEM31841.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228853181|gb|EEM97957.1| Quinol oxidase subunit 3 [Bacillus thuringiensis IBL 200] gi|326938473|gb|AEA14369.1| cytochrome aa3 quinol oxidase polypeptide III [Bacillus thuringiensis serovar chinensis CT-43] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W ++T G F+ EI EF I A Q SAFLS+FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFILTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|207081104|gb|ACI22834.1| cytochrome c oxidase subunit III [Peromyscus aztecus hylocetes] Length = 255 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G +P++ Sbjct: 60 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGISPLN 119 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + + + LL+T G+ F +++ E+ Sbjct: 120 PLEVP--LLNTSVLLASGVSITWAHHSLMEGK-RNNMNQALLITILLGVYFTLLQAMEY- 175 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 176 --FETPFSISDGVYGSTFFMATGFHGLHVIIGSTFLMVCLLRQLKYHFTSKHHFGFEAAA 233 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 234 WYWHFVDVVWLFLYVSIYWWG 254 >gi|241664395|ref|YP_002982755.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii 12D] gi|240866422|gb|ACS64083.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii 12D] Length = 213 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 86/179 (48%), Positives = 116/179 (64%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 36 FGFWVYLMSDLIIFASLFATFCVLRGATAGGPTGKELFDLSYVAIETGILLVSSITYGMV 95 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M++ + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 96 MISLQ-NGRKDQVMLWLGITLLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFLLVGT 154 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV G++W+ VL+ QI KGL RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 155 HGLHVASGMLWIIVLMWQIGAKGLTPTQSTRLSCLSLFWHFLDVVWIGVFTVVYLLGAM 213 >gi|187930228|ref|YP_001900715.1| cytochrome o ubiquinol oxidase subunit III [Ralstonia pickettii 12J] gi|187727118|gb|ACD28283.1| cytochrome o ubiquinol oxidase, subunit III [Ralstonia pickettii 12J] Length = 209 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 86/179 (48%), Positives = 116/179 (64%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFW+YLMSD ++FA F T+ VL A GP ++FD+S + + T +LL+SS++ Sbjct: 32 FGFWVYLMSDLIIFASLFATFCVLRGATAGGPTGKELFDLSYVAIETGILLVSSITYGMV 91 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M++ + + WL +T G F+ MEI EF HLI+ A P RSAFLSSFF LVG Sbjct: 92 MISLQ-NGRKDQVMLWLGITLLLGAAFVGMEINEFHHLIAEGAGPSRSAFLSSFFLLVGT 150 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV G++W+ VL+ QI KGL RL CLS+FWHFLD++WI VF+ VYL+G + Sbjct: 151 HGLHVASGMLWIIVLMWQIGAKGLTPTQSTRLSCLSLFWHFLDVVWIGVFTVVYLLGAM 209 >gi|47568831|ref|ZP_00239525.1| cytochrome c oxidase subunit III [Bacillus cereus G9241] gi|228951199|ref|ZP_04113314.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068385|ref|ZP_04201688.1| Quinol oxidase subunit 3 [Bacillus cereus F65185] gi|229078012|ref|ZP_04210621.1| Quinol oxidase subunit 3 [Bacillus cereus Rock4-2] gi|229149039|ref|ZP_04277283.1| Quinol oxidase subunit 3 [Bacillus cereus m1550] gi|229177229|ref|ZP_04304616.1| Quinol oxidase subunit 3 [Bacillus cereus 172560W] gi|47554507|gb|EAL12864.1| cytochrome c oxidase subunit III [Bacillus cereus G9241] gi|228606235|gb|EEK63669.1| Quinol oxidase subunit 3 [Bacillus cereus 172560W] gi|228634421|gb|EEK91006.1| Quinol oxidase subunit 3 [Bacillus cereus m1550] gi|228705350|gb|EEL57727.1| Quinol oxidase subunit 3 [Bacillus cereus Rock4-2] gi|228714846|gb|EEL66718.1| Quinol oxidase subunit 3 [Bacillus cereus F65185] gi|228808496|gb|EEM55000.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W ++T G F+ EI EF I A Q SAFLS FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSGFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWATCVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|218895754|ref|YP_002444165.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus G9842] gi|228963801|ref|ZP_04124941.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar sotto str. T04001] gi|218540782|gb|ACK93176.1| cytochrome aa3 quinol oxidase, subunit III [Bacillus cereus G9842] gi|228795872|gb|EEM43340.1| Quinol oxidase subunit 3 [Bacillus thuringiensis serovar sotto str. T04001] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W ++T G F+ EI EF I A Q SAFLS+FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFVLTLLLGAGFLFFEIEEFIMYIGEGATIQTSAFLSAFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|119509088|ref|ZP_01628239.1| cytochrome c oxidase subunit III [Nodularia spumigena CCY9414] gi|119466254|gb|EAW47140.1| cytochrome c oxidase subunit III [Nodularia spumigena CCY9414] Length = 204 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 5/194 (2%) Query: 15 FYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISG 73 + + + GF ++L+S+ ++F FF Y V PA + +I Sbjct: 14 HHHPGVEHEHDEEGNKMFGFIVFLLSESVIFLSFFAGYIVYKTTTPNWLPAGVSGLEIRE 73 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 ++T++L+ SS A A L +L T G F++ + E++ ++E Sbjct: 74 PAINTVILVSSSFVIYLAERALQNHNLK-GFRIYLAATMAMGSYFLVGQGIEWS---NLE 129 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 + F+ L G HGLHVF G++ ++ ++ G + S+FWHF+ Sbjct: 130 FGFTSGVYGGMFYLLTGFHGLHVFTGILLQAIIFVRSYLPGNYDSGHYGVNATSLFWHFV 189 Query: 194 DLIWICVFSFVYLM 207 D+IWI +F +YL Sbjct: 190 DVIWIVLFILIYLW 203 >gi|325522319|gb|EGD00931.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia sp. TJI49] Length = 202 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 99/195 (50%), Positives = 129/195 (66%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA G ++FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAML++ ++ + WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLSA-YQQRRGALLGWLAVTFVLGAAFLAMELREFSHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMVVLAAQIVSRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|218453788|gb|ACK76661.1| cytochrome oxidase subunit III [Peromyscus polionotus phasma] Length = 239 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 44 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 103 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 104 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 157 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 158 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 217 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 218 WYWHFVDVVWLFLYVSIYWWG 238 >gi|146762391|gb|ABQ45329.1| cytochrome oxidase subunit 3 [Gymnadenia conopsea] Length = 233 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 11/197 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--VLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 41 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWAFSHSSLAPTVDIGGLRPPKGIGVLDPR 100 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + + V L+ T ++F + E+ Sbjct: 101 EIPFLNTPILPSSGAAVTWAHHALLAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 156 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 157 APSTISDSLYGSTFFLATGFHGFHVIIGTLFLIICCIRQYLGHLTKEHHVGFEAAAWYWH 216 Query: 192 FLDLIWICVFSFVYLMG 208 F+D++ + F +Y G Sbjct: 217 FVDVVRLFPFVSIYWWG 233 >gi|296492454|gb|ADH29753.1| cytochrome c oxidase subunit III [Peromyscus crinitus] gi|296492457|gb|ADH29755.1| cytochrome c oxidase subunit III [Peromyscus crinitus] Length = 255 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 60 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 119 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 120 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRNNMNQALFITILLGIYFTILQAS 173 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 174 EYFETPFSISDGIYGSTFFMATGFHGLHVIIGSTFLMVCLLRQLKFHFTSKHHFGFEAAA 233 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 234 WYWHFVDVVWLFLYVSIYWWG 254 >gi|154685910|ref|YP_001421071.1| CtaE [Bacillus amyloliquefaciens FZB42] gi|154351761|gb|ABS73840.1| CtaE [Bacillus amyloliquefaciens FZB42] Length = 207 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 113/188 (60%), Gaps = 2/188 (1%) Query: 24 CVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLL 83 ++ +LGFW++L + ++FA F T+ L ++ A GP+ ++F++ +F++T++LL Sbjct: 20 TLEGKNKFLGFWLFLGGETVLFASLFATFLALRESKAGGPSTAEMFELPIVFIATMLLLT 79 Query: 84 SSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME-AVPQRSAFL 142 SSL+ +AM K WLLVT G F+ +EIYEF H SA Sbjct: 80 SSLTSVYAMYHMKNFSFK-KMQVWLLVTVLLGAGFLGVEIYEFMHYTHEFGFTITSSALG 138 Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202 S+F+ LVG HG HV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F+ Sbjct: 139 SAFYTLVGTHGAHVAFGLLWISALMIRNAKRGLSLYNAPKYYVASLYWHFIDVVWVFIFT 198 Query: 203 FVYLMGVV 210 VYLMG+V Sbjct: 199 VVYLMGMV 206 >gi|113972152|ref|YP_735945.1| cytochrome c oxidase subunit III [Shewanella sp. MR-4] gi|113886836|gb|ABI40888.1| cytochrome c oxidase, subunit III [Shewanella sp. MR-4] Length = 206 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 1/206 (0%) Query: 5 KIGKSPNFSLFYVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA 64 + + + + ++ E T GFW+YLM+DC++FA F TYAVL N G + Sbjct: 2 SVAIPADLEVAHAEEHHEHHDTGGNTLFGFWLYLMTDCILFASVFATYAVLYMNTDGGVS 61 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 D+F++ + + T LLLSS++ FA L A + T++WL +T G +FI ME+Y Sbjct: 62 GKDIFELDFVLIETAALLLSSITYGFA-LIFAKRHNKAATLTWLAITFALGCVFIGMEVY 120 Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLI 184 EF HLI PQRSAFLSSFF LVG+HGLHV GLIW+ +++I++ K GL + + RL Sbjct: 121 EFHHLIEHGNGPQRSAFLSSFFTLVGMHGLHVTAGLIWMAIMMIEVGKTGLGNRSITRLS 180 Query: 185 CLSMFWHFLDLIWICVFSFVYLMGVV 210 CLS+FWHFLD++WICVF+ VYL+G + Sbjct: 181 CLSLFWHFLDIVWICVFTVVYLLGAL 206 >gi|260769715|ref|ZP_05878648.1| cytochrome O ubiquinol oxidase subunit III [Vibrio furnissii CIP 102972] gi|260615053|gb|EEX40239.1| cytochrome O ubiquinol oxidase subunit III [Vibrio furnissii CIP 102972] gi|315182289|gb|ADT89202.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio furnissii NCTC 11218] Length = 200 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 121/179 (67%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 GFWIYLMSDC++FA F T+AVL A GP ++F++ +F T++LL SS++ F Sbjct: 22 FGFWIYLMSDCVLFASLFATFAVLSNATAGGPTGKELFELPFVFAETMLLLFSSITFGFG 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 M+A K I WL VT G FI ME+YEF HLI+ A PQRSAFLS+FF LVG Sbjct: 82 MIAMKRKD-IAGLKRWLAVTFLLGAGFIGMELYEFHHLIAEGAGPQRSAFLSAFFTLVGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV FGLIWL V Q+ KGL + R CLS+FWHFLD++WICVF+ VYL+GV+ Sbjct: 141 HGLHVTFGLIWLAVCYWQLNTKGLNDMMETRFNCLSLFWHFLDIVWICVFTIVYLLGVM 199 >gi|156976718|ref|YP_001447624.1| cytochrome o ubiquinol oxidase, subunit III [Vibrio harveyi ATCC BAA-1116] gi|156528312|gb|ABU73397.1| hypothetical protein VIBHAR_05493 [Vibrio harveyi ATCC BAA-1116] Length = 199 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 119/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ Sbjct: 19 NKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMLLLFSSITF 78 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F M+A K + WL VT G+ FI ME+YEF HLI PQ SAFLS+FF L Sbjct: 79 GFGMIAMKRKD-VAGLKRWLKVTFLLGLGFICMEVYEFHHLIEEGYGPQESAFLSAFFTL 137 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIWL V Q+ KGL R CLS+FWHFLD++WICVF+ VYL+G Sbjct: 138 VGTHGLHVTFGLIWLAVGYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLLG 197 Query: 209 VV 210 V+ Sbjct: 198 VM 199 >gi|75812459|ref|YP_320078.1| cytochrome c oxidase subunit III [Anabaena variabilis ATCC 29413] gi|75705215|gb|ABA24889.1| cytochrome c oxidase subunit III [Anabaena variabilis ATCC 29413] Length = 206 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 5/192 (2%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG-PAPIDVFDISGIF 75 + + + + + GF ++L+S+ ++F FF Y V P ++ ++ Sbjct: 18 TRTVEHTHDEAANSMFGFIVFLLSESIIFLSFFAGYIVYKTTTPDWLPPGVEGLEVREPA 77 Query: 76 VSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAV 135 ++T++L+ SS FA LA + L T G F+ + E++ S+ Sbjct: 78 INTVILVSSSFVIYFAELALKRHNM-WGFRLLWLTTMMMGSYFLYGQAVEWS---SLHFT 133 Query: 136 PQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDL 195 F F+ L G HGLHVF G++ +++++ L G + S+FWHF+D+ Sbjct: 134 VTSGVFGGMFYLLTGFHGLHVFTGVLLQLIMLVRSLIPGNYDKGHFGVDATSLFWHFVDV 193 Query: 196 IWICVFSFVYLM 207 IWI +F +Y+ Sbjct: 194 IWIILFLLIYIW 205 >gi|254247835|ref|ZP_04941156.1| Cytochrome C oxidase subunit III [Burkholderia cenocepacia PC184] gi|124872611|gb|EAY64327.1| Cytochrome C oxidase subunit III [Burkholderia cenocepacia PC184] Length = 202 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 99/195 (50%), Positives = 130/195 (66%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA G ++FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ ++ ++WL VT G F+ ME+ EF+HL++ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YQQRRGALLAWLAVTFVLGAAFLTMELREFSHLVAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMIVLAAQIVLRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|218453780|gb|ACK76657.1| cytochrome oxidase subunit III [Peromyscus polionotus niveiventris] Length = 243 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 48 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 107 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 108 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 161 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 162 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 221 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 222 WYWHFVDVVWLFLYVSIYWWG 242 >gi|237880825|ref|YP_002907471.1| cytochrome c oxidase subunit III [Notopterus notopterus] gi|237648844|dbj|BAH58941.1| cytochrome c oxidase subunit III [Notopterus notopterus] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 15/198 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVFD 70 + G G +++ S+ + T + G G AP+D F+ Sbjct: 69 GHHTPPVQKGLRFGMILFITSEVFFFLGFFWAFFHSSLAPTPELGGCWPPTGIAPLDPFE 128 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + ++T VLL S ++ ++A + L +T G F ++ E+ Sbjct: 129 VP--LLNTAVLLASGVTVTWAHHSLMEGARKEAV-QSLALTILLGCYFTALQAMEY---Y 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + S+FF G HGLHV G +L V +++ +K S + + +W Sbjct: 183 EAPFTIADGVYGSTFFVATGFHGLHVIVGTSFLAVCLLRQIKYHFTSQHHFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ +Y G Sbjct: 243 HFVDVVWLFLYVSIYWWG 260 >gi|7580470|ref|NP_037655.1|COX3_15261 cytochrome c oxidase subunit III [Talpa europaea] gi|6851072|emb|CAB71165.1| cytochrome oxidase subunit III [Talpa europaea] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 15/199 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVF 69 + + G G ++++S+ + T+ + G AG P++ Sbjct: 68 QGHHTPIVQKGLRYGMILFIISEVFFFAGFFWAFYHSSLAPTHELGGFWPPAGIHPLNPL 127 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 ++ ++T VLL S +S ++A + H + L +T G+ F +++ E+ Sbjct: 128 EVP--LLNTSVLLASGVSITWAHHSLMEGNRKH-MIQALFITIALGVYFTVLQAAEY--- 181 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 + S+FF G HGLHV G +L V I+ LK S + + + Sbjct: 182 YEAPFTISDGVYGSTFFMATGFHGLHVIIGTTFLTVCFIRQLKYHFTSKHHFGFEAAAWY 241 Query: 190 WHFLDLIWICVFSFVYLMG 208 WHF+D++W+ ++ +Y G Sbjct: 242 WHFVDVVWLFLYVSIYWWG 260 >gi|194739369|gb|ACF94329.1| cytochrome c oxidase subunit III [Naja atra] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF + P I+ + Sbjct: 66 TYQGHHTEGVQMNMRYGMILFITSEVFFFLGFFWALYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + + L++T G+ F +++ E+ Sbjct: 126 PMEVPLLNTAVLLSSGATITWSHHTLMKGNKKEAIYALIITVVLGVYFTALQLSEYQ--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLLVCLMRMTRSHFTMTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDVVWLFLYISVYWWG 260 >gi|156878363|ref|YP_001434494.1| cytochrome c oxidase subunit III [Agkistrodon piscivorus] gi|94537510|gb|ABF29840.1| cytochrome c oxidase subunit 3 [Agkistrodon piscivorus] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF T + P I+ + Sbjct: 66 TYQGHHTLGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSLVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L++T G+ F +++ E+ Sbjct: 126 PMDVPLLNTAVLLSSGATITWSHHTMMKGHKKEATYALMITIALGIYFTALQMSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLSVCLVRLIQFHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYVSVYWWG 260 >gi|57281931|emb|CAD19452.1| cytochrome oxidase subunit 3 [Muscari botryoides] Length = 265 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T++L S + ++A A + + V L+ T ++ + E+ Sbjct: 131 EIPFLNTLILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYWWGGI 265 >gi|237869134|ref|YP_002907458.1| cytochrome c oxidase subunit III [Chitala ornata] gi|237648830|dbj|BAH58928.1| cytochrome c oxidase subunit III [Chitala ornata] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 15/198 (7%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVFD 70 + G G +++ S+ + T + G G AP+D F+ Sbjct: 69 GHHTPPVQKGLRFGMILFITSEVFFFLGFFWAFFHSSLAPTPELGGCWPPTGIAPLDPFE 128 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + ++T VLL S ++ ++A + L +T G F ++ E+ Sbjct: 129 VP--LLNTAVLLASGVTVTWAHHSLMEGARKEAV-QSLALTILLGCYFTALQAMEY---Y 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + S+FF G HGLHV G +L V +++ +K S + + +W Sbjct: 183 EAPFTIADGVYGSTFFVATGFHGLHVIVGTTFLTVCLLRQIKYHFTSQHHFGFEAAAWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ +Y G Sbjct: 243 HFVDVVWLFLYVSIYWWG 260 >gi|218453796|gb|ACK76665.1| cytochrome oxidase subunit III [Peromyscus polionotus sumneri] gi|218453798|gb|ACK76666.1| cytochrome oxidase subunit III [Peromyscus polionotus sumneri] gi|218453804|gb|ACK76669.1| cytochrome oxidase subunit III [Peromyscus polionotus allophrys] gi|218453806|gb|ACK76670.1| cytochrome oxidase subunit III [Peromyscus polionotus allophrys] gi|218453812|gb|ACK76673.1| cytochrome oxidase subunit III [Peromyscus polionotus ammobates] gi|218453814|gb|ACK76674.1| cytochrome oxidase subunit III [Peromyscus polionotus ammobates] gi|218453816|gb|ACK76675.1| cytochrome oxidase subunit III [Peromyscus polionotus ammobates] Length = 253 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 58 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 117 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 118 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 171 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 172 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 231 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 232 WYWHFVDVVWLFLYVSIYWWG 252 >gi|218453792|gb|ACK76663.1| cytochrome oxidase subunit III [Peromyscus polionotus polionotus] gi|218453794|gb|ACK76664.1| cytochrome oxidase subunit III [Peromyscus polionotus polionotus] Length = 243 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 48 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 107 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 108 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 161 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 162 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 221 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 222 WYWHFVDVVWLFLYVSIYWWG 242 >gi|218453790|gb|ACK76662.1| cytochrome oxidase subunit III [Peromyscus polionotus polionotus] Length = 243 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 48 TYQGHHTPIVQKGLRYGMILFIVSEVFFFTGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 107 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 108 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 161 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 162 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 221 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 222 WYWHFVDVVWLFLYVSIYWWG 242 >gi|251794162|ref|YP_003008893.1| cytochrome o ubiquinol oxidase subunit III [Paenibacillus sp. JDR-2] gi|247541788|gb|ACS98806.1| cytochrome o ubiquinol oxidase, subunit III [Paenibacillus sp. JDR-2] Length = 208 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 110/179 (61%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFW++L++D ++F F T++VL + GP P ++F++ G+ T +LL SS + A Sbjct: 31 LGFWMFLITDVILFGTLFATFSVLHNSTNGGPTPHEMFEMPGVIAETFILLTSSFTSGIA 90 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 +L + WL++TA G FI +E+ EF ++ S + S+FF LVG Sbjct: 91 VLQMHKGNKK-GLIGWLIITALLGASFIFLEVSEFIKMVDEGVTIGTSGYWSAFFTLVGT 149 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HGLHV GL W+ L+IQI K+G+ +R++ +S++WHFLD++WI V + VYLMGV+ Sbjct: 150 HGLHVSVGLCWMVGLMIQIGKRGITPVTKRKVTIVSLYWHFLDVVWIFVLTVVYLMGVM 208 >gi|165932821|ref|YP_001649610.1| cytochrome c oxidase polypeptide III [Rickettsia rickettsii str. Iowa] gi|165907908|gb|ABY72204.1| cytochrome c oxidase polypeptide III [Rickettsia rickettsii str. Iowa] Length = 308 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 20/206 (9%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------------VLGKNYAAGPA 64 + + + G +G ++++++ + F VFF ++ V+ + P Sbjct: 106 EHQHTSPVRKGLQIGMALFILTEIVFFGVFFASFLKSSLSPVGLLDGVWVVKQGIWPPPT 165 Query: 65 PIDVFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIY 124 F++T++LLLS + ++A A K V+ L +T G+ F M+ Y Sbjct: 166 IKTFEPFDIPFINTLILLLSGTTVTWAHYALEEKNQKD-CVTALALTILLGIFFTTMQAY 224 Query: 125 EFAHLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGN--QRR 182 E+ + + S+F+ G HG HV G I+L + + + + Sbjct: 225 EY---YNAAFKFTDGIYASNFYLATGFHGAHVIIGTIFLIICYFRAKRGDFTTEGNGHLG 281 Query: 183 LICLSMFWHFLDLIWICVFSFVYLMG 208 C + +WHF+D++W+ +F+FVY+ G Sbjct: 282 FECAAWYWHFVDVVWLFLFTFVYIFG 307 >gi|155970514|gb|ABU41863.1| cytochrome c oxidase subunit 3 [Agkistrodon piscivorus] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 9/198 (4%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNY------AAGPAPIDVFD 70 + G +++ S+ F FF T + P I+ + Sbjct: 66 TYQGHHTLGVQKNMRYGMILFITSEVFFFLGFFWTLYHVSFVPTPELGAEWPPTGINPLN 125 Query: 71 ISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLI 130 + + +LLSS + + K + L++T G+ F +++ E+ Sbjct: 126 PMDVPLLNTAVLLSSGATITWSHHTMMKGHKKEATYALMITIALGVYFTALQVSEYM--- 182 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 S + S FF G HGLHV G +L V ++++++ + + +W Sbjct: 183 ETPFTISDSVYGSLFFVATGFHGLHVMIGTSFLSVCLVRLIQFHFTTTHHFGYEAAIWYW 242 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ ++ VY G Sbjct: 243 HFVDIVWLFLYVSVYWWG 260 >gi|206560506|ref|YP_002231270.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia cenocepacia J2315] gi|198036547|emb|CAR52444.1| cytochrome o ubiquinol oxidase subunit III [Burkholderia cenocepacia J2315] Length = 202 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 101/195 (51%), Positives = 130/195 (66%), Gaps = 7/195 (3%) Query: 18 KDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVS 77 D + GFW+YLM+DC++FA F T+AVLG YA G ++FDI G+ V Sbjct: 13 HDDHPP----SHSVFGFWLYLMTDCVIFAALFATFAVLGHQYAGGQTAKELFDIPGVAVE 68 Query: 78 TIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQ 137 T LLLSS++ FAMLA+ K+ ++WL VT G F+ ME+ EF+HLI+ A PQ Sbjct: 69 TAALLLSSITYGFAMLAA-YKQQRGALLAWLAVTFVLGAAFLAMELREFSHLIAEGAGPQ 127 Query: 138 RSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKG--LISGNQRRLICLSMFWHFLDL 195 RSAFLS+FF LVG HGLHV GL+W+ VL QI+ +G L + RRL CLS+FWHFLD+ Sbjct: 128 RSAFLSAFFTLVGTHGLHVTAGLLWMLVLAAQIVFRGGDLTDRDLRRLTCLSLFWHFLDI 187 Query: 196 IWICVFSFVYLMGVV 210 +WICVFSFVYL V+ Sbjct: 188 VWICVFSFVYLASVI 202 >gi|17546579|ref|NP_519981.1| transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase [Ralstonia solanacearum GMI1000] gi|17428878|emb|CAD15562.1| probable transmembrane cytochrome o ubiquinol oxidase (subunit III) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 208 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 92/193 (47%), Positives = 122/193 (63%), Gaps = 4/193 (2%) Query: 17 VKDKKESCVDHD---GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISG 73 + HD T LGFW+YLMSDCL+FAV F T+ VL + A GP +F++ Sbjct: 13 APEAAHPHPHHDTGFNTTLGFWLYLMSDCLIFAVLFATFGVLSGSTAGGPGGRQLFELPF 72 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 + T++LL+SS + A+L + V WL VT G +F+ ME+YEF+HL+ Sbjct: 73 VLAETMLLLVSSYTFGIALL-KQDADAAPRMVRWLGVTFLLGALFVGMELYEFSHLLHEG 131 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 A P SA+LS+FF LVG HGLHV GL+WL V++ Q+ GL +RRL CLS+FWHFL Sbjct: 132 AGPGVSAYLSAFFTLVGTHGLHVTAGLLWLAVMMHQVRHFGLDGVVRRRLACLSLFWHFL 191 Query: 194 DLIWICVFSFVYL 206 DL+WICVF+FVYL Sbjct: 192 DLVWICVFTFVYL 204 >gi|57282271|emb|CAD32364.1| cytochrome oxidase subunit 3 [Veratrum latifolium] Length = 265 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGHHTKAVQLGPRYGSILFIVSEVMFLFAFFWASFHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T +L S + ++A A + V L+ T ++ + E+ Sbjct: 131 EIPFLNTPILPSSGAAVTWAHHAILAGKEK-GAVYALVATVSLALVSTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF+ G HG HV G ++L + I+ L + + +WH Sbjct: 187 APSTISDSIYGSTFFSATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + F +Y G + Sbjct: 247 FVDVVRLFPFVSIYRWGGI 265 >gi|57282235|emb|CAD32346.1| cytochrome oxidase subunit 3 [Spiranthes spiralis] Length = 265 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVT--YAVLGKNYAAG----PAPIDVFDI- 71 + + G G ++++S+ + FF ++ L G P I V D Sbjct: 71 EGYHTKAVQLGPRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPR 130 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T++L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTLILPSSGAAVTWAHHAILAGKEK-RAVYALVATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 + S + S+FF G HG HV G ++L + ++ L + + +WH Sbjct: 187 APSTISDSIYGSTFFLATGFHGFHVIIGTLFLIICCLRQYLGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++ + +F +Y G + Sbjct: 247 FVDVVRLFLFVSIYWWGGI 265 >gi|163745862|ref|ZP_02153221.1| cytochrome c oxidase, subunit III [Oceanibulbus indolifex HEL-45] gi|161380607|gb|EDQ05017.1| cytochrome c oxidase, subunit III [Oceanibulbus indolifex HEL-45] Length = 268 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 9/198 (4%) Query: 20 KKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYA--------VLGKNYAAGPAPIDVFDI 71 + V G GF +++MS+ + F +F ++ + P V Sbjct: 69 GDHTGVVRIGLRYGFILFIMSEVMFFVAWFWSFFKQALYPMYEYAGSTYLKPEIHAVDAF 128 Query: 72 SGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL-I 130 ++T+VLLLS + ++A A A + ++ L + G+ F ++ +E+ L + Sbjct: 129 HLPLINTLVLLLSGCAVTWAHHALAHENNRKDLIAGLAIAVVLGVFFTALQAFEYYELLV 188 Query: 131 SMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFW 190 + + SSFF G HG HV G I+LF+ +++ ++ + +W Sbjct: 189 HDDWTFGGDMYFSSFFMATGFHGFHVIIGTIFLFICLLRAMRGHFTPERHVGFEAAAWYW 248 Query: 191 HFLDLIWICVFSFVYLMG 208 HF+D++W+ +F VY+ G Sbjct: 249 HFVDVVWLFLFFAVYMWG 266 >gi|229101461|ref|ZP_04232202.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-28] gi|228681949|gb|EEL36085.1| Quinol oxidase subunit 3 [Bacillus cereus Rock3-28] Length = 200 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 1/179 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++FA F +Y VL A GP P +F++ + + T++LL SS +C Sbjct: 22 LGFWIFLGAEIMLFATLFASYLVLAGRTADGPTPAQLFELKTLLIQTLLLLTSSFTCGIV 81 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + W ++T G F+ EI EF + A Q SAFLS+FF L+G Sbjct: 82 IHEMRKHNQK-AMLGWFILTLLLGAGFLFFEIEEFILYVGEGATIQTSAFLSAFFVLLGT 140 Query: 152 HGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMGVV 210 HG HV G+IW ++IQILK+GL R++ +S++WHFLDL+W+ +++ VYL G+V Sbjct: 141 HGAHVTGGIIWAICVIIQILKRGLTPVTARKVFIISLYWHFLDLVWVFIYTLVYLNGMV 199 >gi|207081107|gb|ACI22836.1| cytochrome c oxidase subunit III [Peromyscus polionotus subgriseus] gi|296492421|gb|ADH29731.1| cytochrome c oxidase subunit III [Peromyscus polionotus leucocephalus] gi|296492469|gb|ADH29763.1| cytochrome c oxidase subunit III [Peromyscus polionotus] Length = 255 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + + G G ++++S+ + T+ + G G P++ Sbjct: 60 TYQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLAPTHDLGGCWPPTGITPLN 119 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + K + ++ I I + + Sbjct: 120 PLEVP--LLNTSVLLASGVSITWAHHSLMEG----KRSNMNQALLITILLGIYFTILQAS 173 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L V +++ LK S + + Sbjct: 174 EYFETPFSISDGVYGSTFFMATGFHGLHVIIGTTFLMVCLMRQLKYHFTSKHHFGFEAAA 233 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 234 WYWHFVDVVWLFLYVSIYWWG 254 >gi|332974366|gb|EGK11294.1| cytochrome c oxidase, subunit III [Desmospora sp. 8437] Length = 207 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 111/192 (57%), Gaps = 1/192 (0%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVST 78 + +++ ++ +GFW++L ++ +FA Y L ++ GP ++F + + +ST Sbjct: 17 EPEKATLEGKNKIVGFWLFLAAESTLFATEMGAYVALKGSHLNGPPSQELFQLPMVALST 76 Query: 79 IVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQR 138 ++LL+SSL+ +++ T K ++W +T G F+ +E YEF + Sbjct: 77 LILLVSSLTSVLGVMSMHTGDAR-KMLTWFGLTVLLGAAFLGLETYEFMEYVHEGHTLTG 135 Query: 139 SAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWI 198 SAF SSF+ L+G HG HV FG++W+ LVIQ KKG+ + S++WHF+D++WI Sbjct: 136 SAFASSFYLLLGTHGAHVLFGVLWILGLVIQGAKKGITVHTAPKFYLASLYWHFIDVVWI 195 Query: 199 CVFSFVYLMGVV 210 +F+ VYLMG++ Sbjct: 196 FIFTVVYLMGMI 207 >gi|323488486|ref|ZP_08093731.1| cytochrome c oxidase, subunit III [Planococcus donghaensis MPA1U2] gi|323397854|gb|EGA90655.1| cytochrome c oxidase, subunit III [Planococcus donghaensis MPA1U2] Length = 208 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 110/197 (55%), Gaps = 3/197 (1%) Query: 16 YVKDKKESCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAG--PAPIDVFDISG 73 + + + ++ ++GFW+ L ++ + FA F TY L +G + +F++ Sbjct: 12 WPDHPETATLEGKNKFVGFWLLLAAETVTFASLFATYLALKDKGPSGMEFSAAGLFELPL 71 Query: 74 IFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISME 133 +F T++LL SSL+ +AM +WL +T G+ F+ +EIYEF H + + Sbjct: 72 VFAMTMILLTSSLTSVYAMHHMKNYNFK-AMQAWLAITVLLGLTFLGLEIYEFNHYVHIG 130 Query: 134 AVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFL 193 SAF S+FF LVG HG HV FGL W L+++ K+GL N + S++WHF+ Sbjct: 131 FGYTNSAFSSAFFTLVGTHGAHVLFGLSWFIALMLRNAKRGLNMYNAPKFYLASLYWHFI 190 Query: 194 DLIWICVFSFVYLMGVV 210 D++W+ +F+ VYLMGV+ Sbjct: 191 DVVWVFIFTVVYLMGVI 207 >gi|205373048|ref|ZP_03225854.1| CtaE [Bacillus coahuilensis m4-4] Length = 216 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 1/189 (0%) Query: 23 SCVDHDGTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPA-PIDVFDISGIFVSTIVL 81 + V + GFW +L + ++FA F TY L G ++FD+ +FV+T++L Sbjct: 27 TNVRRKNKFYGFWFFLGGETVLFASLFATYLALKDKVLPGQKVAAEIFDLPLVFVATMLL 86 Query: 82 LLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAF 141 L SSL+ +AM + A + + ++ + SAF Sbjct: 87 LTSSLTSVYAMHHMKNYNFRGMVAWLFITVALGAAFLGLEVYEFYHYVHAYGHTFTSSAF 146 Query: 142 LSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVF 201 S+F+ALVG HGLHV FGL+W+ L+I+ K+GL N + S++WHF+D++W+ +F Sbjct: 147 GSAFYALVGTHGLHVAFGLLWITTLLIRNRKRGLSLYNAPKFYVASLYWHFIDVVWVFIF 206 Query: 202 SFVYLMGVV 210 + VYLMG+V Sbjct: 207 TVVYLMGLV 215 >gi|148978617|ref|ZP_01815044.1| cytochrome o ubiquinol oxidase, subunit III [Vibrionales bacterium SWAT-3] gi|145962283|gb|EDK27565.1| cytochrome o ubiquinol oxidase, subunit III [Vibrionales bacterium SWAT-3] Length = 205 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 29 GTYLGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSC 88 GFW+YLMSDC++FA F TYAVL AGP D+F++ +FV T++LL SS++ Sbjct: 25 NKLFGFWVYLMSDCVLFATLFATYAVLESGSIAGPTGKDIFELPFVFVETMMLLFSSITF 84 Query: 89 SFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFAL 148 F M+A + + WL VT G+ FI ME+YEF HLI+ PQ SAFLS+FF L Sbjct: 85 GFGMIAMKRQD-VAGLKKWLKVTFLLGLAFICMEVYEFHHLIAEGYGPQESAFLSAFFTL 143 Query: 149 VGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFSFVYLMG 208 VG HGLHV FGLIW+ V Q+ KGL R CLS+FWHFLD++WICVF+ VYLMG Sbjct: 144 VGTHGLHVTFGLIWMAVAYHQLSTKGLNDNMSMRFQCLSLFWHFLDIVWICVFTIVYLMG 203 Query: 209 VV 210 V+ Sbjct: 204 VM 205 >gi|57282283|emb|CAD32370.1| cytochrome oxidase subunit 3 [Asphodelus sp. Quagliariello 16105] Length = 265 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 11/199 (5%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLMFAV--FFVTYAVLGKNYAAG----PAPIDVFDIS 72 + + G GF ++++S+ + F + +++ L G P I V D Sbjct: 71 EGYHTKAVQLGLRYGFILFIVSEVMFFFAFFWASSHSSLAPTVEIGGIWPPKGIGVLDPW 130 Query: 73 -GIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLIS 131 F++T++L S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIPFLNTLILPSSGAAVTWAHHAILAGKEK-RAVYALIATVSLALVFTGFQGMEY---YQ 186 Query: 132 MEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWH 191 S + S+FF G HG HV G I+L + I+ + L + + +WH Sbjct: 187 APFTISDSIYGSTFFLATGFHGFHVIIGTIFLIICGIRQYRGHLTKEHHVGFEAAAWYWH 246 Query: 192 FLDLIWICVFSFVYLMGVV 210 F+D++W+ +F +Y G + Sbjct: 247 FVDVVWLFLFVSIYWGGGI 265 >gi|112253881|ref|YP_717136.1| cytochrome c oxidase subunit 3 [Brassica napus] gi|37591083|dbj|BAC98885.1| cytochrome c oxidase subunit 3 [Brassica napus] Length = 265 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 15/201 (7%) Query: 19 DKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPIDVF 69 + + V G GF ++++S+ + + + G G +D + Sbjct: 71 EGHHTKVVQLGLRYGFILFIVSEVMFFFAFFWAFFHSSLAPAVEIGGIWPPKGIGVLDPW 130 Query: 70 DISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHL 129 +I F++T++LL S + ++A A + + V L+ T ++F + E+ Sbjct: 131 EIP--FLNTLILLSSGAAVTWAHHAILAGKEK-RAVYALVATVLLALVFTGFQGMEY--- 184 Query: 130 ISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMF 189 S + S+FF G HG HV G ++L + I+ L + + + Sbjct: 185 YQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWY 244 Query: 190 WHFLDLIWICVFSFVYLMGVV 210 WHF+D++W+ +F +Y G + Sbjct: 245 WHFVDVVWLFLFVSIYWWGGI 265 >gi|164519757|gb|ABY59927.1| cytochrome c oxidase subunit III [Homo sapiens] Length = 261 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 15/201 (7%) Query: 17 VKDKKESCVDHDGTYLGFWIYLMSDCLM---------FAVFFVTYAVLGKNYAAGPAPID 67 + G G +++ S+ + T + G G P++ Sbjct: 66 TYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLN 125 Query: 68 VFDISGIFVSTIVLLLSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFA 127 ++ ++T VLL S +S ++A + ++ + LL+T G+ F +++ E+ Sbjct: 126 PLEVP--LLNTSVLLASGVSITWAHHSLMENN-RNQMIQALLITILLGLYFTLLQASEY- 181 Query: 128 HLISMEAVPQRSAFLSSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLS 187 + S+FF G HGLHV G +L + I+ L S + + Sbjct: 182 --FESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHFTSKHHFGFEAAA 239 Query: 188 MFWHFLDLIWICVFSFVYLMG 208 +WHF+D++W+ ++ +Y G Sbjct: 240 WYWHFVDVVWLFLYVSIYWWG 260 >gi|167463409|ref|ZP_02328498.1| cytochrome aa3 quinol oxidase (subunit III) [Paenibacillus larvae subsp. larvae BRL-230010] Length = 206 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 1/175 (0%) Query: 32 LGFWIYLMSDCLMFAVFFVTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLLLSSLSCSFA 91 LGFWI+L ++ ++F+ F T+ VL A GP P D+F+I G+ + T +LL SS +C A Sbjct: 28 LGFWIFLGAEIVLFSTLFATFMVLVNRVADGPTPQDLFEIKGVLIQTFLLLTSSFTCGIA 87 Query: 92 MLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFLSSFFALVGL 151 + + + V WL++T G+ F+ EI EF + A SAF SSFF L G Sbjct: 88 VHELRRR