RPSBLAST alignment of GI: 254780472 and protein with PDBid: 1v54

>1v54_C Cytochrome C oxidase polypeptide III; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.25.1.1 PDB: 1v55_C* 2dyr_C* 2eij_C* 2eik_C* 2eil_C* 2eim_C* 2ein_C* 2zxw_C* 2occ_C* 1oco_C* 1occ_C* 1ocz_C* 1ocr_C* 2dys_C* Length = 261

 Score = 84.3 bits (208), Expect = 2e-17
 Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 9/186 (4%)

Query: 29  GTYLGFWIYLMSDCLMFAVFF------VTYAVLGKNYAAGPAPIDVFDISGIFVSTIVLL 82
           G   G  ++++S+ L F  FF                   P  I   +   + +    +L
Sbjct: 78  GLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVL 137

Query: 83  LSSLSCSFAMLASATKRLIHKTVSWLLVTAFFGMIFIIMEIYEFAHLISMEAVPQRSAFL 142
           L+S         S  +      +  L +T   G+ F +++  E+              + 
Sbjct: 138 LASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYE---APFTISDGVYG 194

Query: 143 SSFFALVGLHGLHVFFGLIWLFVLVIQILKKGLISGNQRRLICLSMFWHFLDLIWICVFS 202
           S+FF   G HGLHV  G  +L V   + LK    S +       + +WHF+D++W+ ++ 
Sbjct: 195 STFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYV 254

Query: 203 FVYLMG 208
            +Y  G
Sbjct: 255 SIYWWG 260