HHsearch alignment for GI: 254780473 and conserved domain: COG3256
>COG3256 NorB Nitric oxide reductase large subunit [Inorganic ion transport and metabolism].
Probab=99.66 E-value=1.9e-10 Score=88.65 Aligned_cols=438 Identities=15% Similarity=0.173 Sum_probs=270.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 47999999999999999999999999998507675----66776687898999999999999999999999999999998
Q gi|254780473|r 64 HKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASG----GGEGYLDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVVPL 139 (671)
Q Consensus 64 HK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~----~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~~n~lvPl 139 (671)
T Consensus 249 sQkva~lyf~~A~~Lf~vQiLlG~~~~hyyVege~fyGI~l~~~LP---fni~R~~H~nlavvWIa~~w-laa~lyllP~ 324 (717)
T COG3256 249 SQKVALLYFFLAVALFVVQILLGGLTAHYYVEGEGFYGIPLAQVLP---FNITRTVHTNLAVVWIATGW-LAAGLYLLPE 324 (717)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHCC---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 8998888999999999999998877325686366545762566313---79999999858999999999-9888875065
Q ss_pred HCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6498--64005889999999999999999999971767788831347865587788520458877999999999875568
Q gi|254780473|r 140 QIGA--RDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGIN 217 (671)
Q Consensus 140 ~iGa--rdlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iN 217 (671)
T Consensus 325 ~~~pk~~~l~s~~L~~al~~v~~gs~~g~~~gyl~~l~~-~~~F~----~G~QG~~~~~~g~-lwqlll~~~ll~~v~Lm 398 (717)
T COG3256 325 LGGPKFQELGSPKLLIALFFVVVGSLAGAWLGYLQLLPA-PFWFW----FGHQGYEYLGRGR-LWQLLLIKGLLVWVALM 398 (717)
T ss_pred HCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCEE----ECCCCCCCCCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 068236553368999999999999999999998852687-31100----1556873356007-99999999999999999
Q ss_pred HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999972368988313315666899999999997333578889987776329801146543210132212333401257
Q gi|254780473|r 218 LVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEV 297 (671)
Q Consensus 218 fi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeV 297 (671)
T Consensus 399 fra~~t~~~~~grkt~~i~~~-------------~~~~~gig~Ff~-------~~~~~~~~~-n~t~dey~rWwvVHlwV 457 (717)
T COG3256 399 FRANVTATKLKGRKTTLIAIL-------------LLSLTGIGLFFL-------FGLYNPEWT-NLAVDEYWRWWVVHLWV 457 (717)
T ss_pred HHHCCHHHHCCCCCHHHHHHH-------------HHHHHHHHHHHH-------HHHCCCCCC-CCHHHHHHHHHHHHHHH
T ss_conf 996031542478642499999-------------999999999983-------010368888-72099999999999998
Q ss_pred H-HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-9998799999999853105640266899999999999975332-2102247875889987653346788987799998
Q gi|254780473|r 298 Y-ILVLPAFGIFSEVVATFSGKRLFGYNSMVYATLAITILSYTVW-LHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFN 375 (671)
Q Consensus 298 Y-IliLPa~Gi~seiip~fs~kplfgy~~~v~A~~~i~~lsf~VW-~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgvkiFn 375 (671)
T Consensus 458 EGfwe~i~~~ilafLlv~lg~V~rs~a~~a~~v~~~l~l~sGiiGT~HHyYf~G~P~~wm~iGAvfSaLEVvPl~~l~~~ 537 (717)
T COG3256 458 EGFWEVIATAILAFLLVKLGGVDRSVAEKALYVIAALALFSGIIGTLHHYYFIGTPGYWMWIGAVFSALEVVPLFLLGLE 537 (717)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66699999999999999927969899999999999999974765753114666881699999999988666699999999
Q ss_pred HHHHHCCC--CCEEC-HHHHHHHH--HHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78742587--30224-37999999--999999887556530343211121274220447899999999999999999962
Q gi|254780473|r 376 WLFTMRLG--KVRFE-VPMMWTLG--FMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWF 450 (671)
Q Consensus 376 wl~Tl~~G--~ir~~-~pml~~lg--fi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~ 450 (671)
T Consensus 538 af~~~~r~~~~~~~~r~~~~~~~~~Av~~wfvGAgv~Gflin~pivnYY~hG~q~TaaHaHlAffgvYgml~i~mm~~Al 617 (717)
T COG3256 538 AFELWKRGEGRDWPNRARLPWSCFVAVGAWFVGAGVFGFLINPPIVNYYTHGLQTTAAHAHLAFFGVYGMLALAMMLYAL 617 (717)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999765046414568899999999999987655552114650677753020001677888887899999999999999
Q ss_pred HHHHCCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC-C-CHHHCC-CC-C------CHHHHHHHHHHHHHHHHHHH
Q ss_conf 44307674-71689999999999999999-9999987640-5-303002-58-7------00579999999999999999
Q gi|254780473|r 451 PKAFGYQL-NSFWGKVSFWCWFVGFYLAF-MPLYALGLKG-V-TRRLSQ-YE-D------TTLQVYYVVALLGAVLIGIG 518 (671)
Q Consensus 451 Pk~~Gr~l-~e~lgk~~Fwl~~iGf~l~F-~pm~~lGl~G-m-pRR~~~-y~-~------~~~~~~n~istiGa~l~~~g 518 (671)
T Consensus 618 ~~l~~~~~~~~kl~~~afw~m~~glv~m~~~sL~~aGv~Q~~~s~~~G~W~Ars~~~~~q~~l~~~vWLR~~gdvVf~ig 697 (717)
T COG3256 618 RELRPIGEAPDKLLRWAFWLMNGGLVLMTAISLLPAGVVQAWLSITHGYWYARSPEFAVQDQLALFVWLRIGGDVVFAIG 697 (717)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCEEEEHH
T ss_conf 85365432337788899999987899999999978789999988631045424878875786555047872487888767
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999744
Q gi|254780473|r 519 VFSFVLSFIVSFLN 532 (671)
Q Consensus 519 ~l~f~~nl~~S~~~ 532 (671)
T Consensus 698 A~~~li~~lr~~~~ 711 (717)
T COG3256 698 AIVFLIYVLRGGKG 711 (717)
T ss_pred HHHHHHHHHHCCCC
T ss_conf 89999999701024