HHsearch alignment for GI: 254780473 and conserved domain: MTH00048
>MTH00048 COX1 cytochrome c oxidase subunit I; Provisional.
Probab=100.00 E-value=0 Score=1336.50 Aligned_cols=507 Identities=32% Similarity=0.684 Sum_probs=490.8
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf 344303000014799999999999999999999999999850767566776687898999999999999999999999-9
Q gi|254780473|r 53 YLWKEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMIT-G 131 (671)
Q Consensus 53 ~lw~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~-G 131 (671)
T Consensus 3 wl~-~w~~t~dHK~IG~~Yli~~l~~~~iGg~~alliR~eL~~p~---~~~~~~~~YN~~~T~HG~iMiF~~vmP~l~gg 78 (514)
T MTH00048 3 WLF-SWLFTLDHKRIGIIYSLLGVWSGFVGLSLSLLIRLNFLDPY---YNVIPLDVYNFLITNHGIIMIFFFLMPVLIGG 78 (514)
T ss_pred HHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 054-64401679999999999999999999999999999981875---35678248999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999998649864005889999999999999999999971767788831347865587788520458877999999999
Q gi|254780473|r 132 IMNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGT 211 (671)
Q Consensus 132 ~~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigs 211 (671)
T Consensus 79 fgNyliPlmiGa~DmaFPRLNa~SfWl~~~~~~~~~~s~~~g--~~~GWT~YpPLS~~~~~~g~g~d~~i~~l~l~giSS 156 (514)
T MTH00048 79 FGNYLLPLLLGLSDLNLPRLNALSAWLLVPSIVFLLLSMCLG--AGVGWTFYPPLSSSYFSSSVGVDFLMFSLHLAGVSS 156 (514)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 899999996599753005478878998999999999986217--888851616812025789831799999999999989
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHH
Q ss_conf 87556899999972368988313315666899999999997333578889987776329801146543210132212333
Q gi|254780473|r 212 TLSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWI 291 (671)
Q Consensus 212 ll~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~ 291 (671)
T Consensus 157 ilgsiNfi~Ti~~-r~~~~~~~rmPlf~Ws~l~Ts~Lll~a~PvL~~a~~mll~DR~~gt~FF~p~~GGdp~L~QHLFWf 235 (514)
T MTH00048 157 LFGSINFICTLYS-AFMTNVFSRTSIILWAYLFTSILLLLSLPVLAAAITMLLFDRNFGSAFFDPLGGGDPVLFQHMFWF 235 (514)
T ss_pred HHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHH
T ss_conf 9989999999998-079985011539999999999999984259999999988144557767786779872354045100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 4012579999879999999985310564-026689999999999997533221022478758899876533467889877
Q gi|254780473|r 292 WGHPEVYILVLPAFGIFSEVVATFSGKR-LFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTG 370 (671)
Q Consensus 292 fGHPeVYIliLPa~Gi~seiip~fs~kp-lfgy~~~v~A~~~i~~lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTg 370 (671)
T Consensus 236 fGHPEVYIliLPafGiiSeii~~~s~k~~iFGy~~mv~a~~~I~~lgf~VW~HHMFt~G~~~~~~~~Fs~~T~lIavPTg 315 (514)
T MTH00048 236 FGHPEVYVLILPGFGIISHICLSLSNNDDSFGYYGLLFAMFSIVCLGSVVWAHHMFTVGLDVKTAVFFSSVTMIIGVPTG 315 (514)
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 58973632004227999999987407865133668999999998760146742446238871388998864578760025
Q ss_pred HHHHHHHHHHCCCCCEECHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999878742587302243799-999999999988755653034321112127422044789999999999999999996
Q gi|254780473|r 371 AKIFNWLFTMRLGKVRFEVPMM-WTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYW 449 (671)
Q Consensus 371 vkiFnwl~Tl~~G~ir~~~pml-~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW 449 (671)
T Consensus 316 ikiFnWi~Tl~~g~i~~~~p~l~f~~gfi~~F~iGGlTGv~la~~~~D~~~HdTyfVVaHFHyvl~~g~vf~~fag~yyw 395 (514)
T MTH00048 316 IKVFSWLYMLLNSRVRKSDPVVWWVVSFIVLFTIGGVTGIVLSASVLDNVLHDTWFVVAHFHYVLSLGSYSSVVIMFIWW 395 (514)
T ss_pred HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999984787043628999999999999835211021366533405168268984303366659999999999971
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 24430767471689999999999999999999998764053030025870057999999999999999999999999999
Q gi|254780473|r 450 FPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVS 529 (671)
Q Consensus 450 ~Pk~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S 529 (671)
T Consensus 396 ~Pk~tG~~~~e~lg~~hfw~~fiG~nltF~Pmh~lGl~GMPRR~~~Y~-~~~~~~N~istiGa~i~~~~~l~f~~~~~~s 474 (514)
T MTH00048 396 WPLITGLSLNKYLLQCHCIISMIGFNLCFFPMHYFGLCGLPRRVCIYE-PSYYWINVVSSVGSFISAFSGCFFVFILWES 474 (514)
T ss_pred CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 541315251579999999999999999999899865589988789885-6788789999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCEECC
Q ss_conf 7449535689998999971012699811998-9475960784
Q gi|254780473|r 530 FLNRSKLQDTIGDPWDGRTLEWSISSPSPQY-NFAFTPIVST 570 (671)
Q Consensus 530 ~~~~~~~~~~~~dPW~~~tLEW~~~sPpp~~-nF~~~P~v~~ 570 (671)
T Consensus 475 ~~~g~~~~~---~~~~~~~lew~~~sPpp~hn~~~~~p~~~~ 513 (514)
T MTH00048 475 LVVGNRVLG---LWGSSSCVVNVLTSPVPYHNDYFCYPYNVD 513 (514)
T ss_pred HHHCCCCCC---CCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 984980578---999987731314899984356556765688