HHsearch alignment for GI: 254780473 and conserved domain: cd00919

>cd00919 Heme_Cu_Oxidase_I Heme-copper oxidase subunit I. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is diverse in terms of electron donors, subunit composition, and heme types. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. It has been proposed that Archaea acquired heme-copper oxidases through gene transfer from Gram-positive bacteria. Membership in the superfamily is defined by subunit I, which contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons to the binuclear center. Only subunit I is common to the entire superfamily. For every reduction of an O2 molecule, eight protons are taken from
Probab=100.00  E-value=0  Score=1001.92  Aligned_cols=463  Identities=49%  Similarity=0.965  Sum_probs=456.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             47999999999999999999999999998507675667766878989999999999999999999999999999986498
Q gi|254780473|r   64 HKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVVPLQIGA  143 (671)
Q Consensus        64 HK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~~n~lvPl~iGa  143 (671)
T Consensus         1 hk~ig~~y~~~a~~~~~~g~~~~ll~R~~l~~p~---~~~~~~~~Y~~~~T~HG~~mif~~~~~~~~g~~~~~~~~~ig~   77 (463)
T cd00919           1 HKDIGLLYLIFAFVALLLGGLLALLIRLELATPG---SLFLDPQLYNQLVTAHGVIMIFFFVMPAIFGGFGNLLPPLIGA   77 (463)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9159999999999999999999999999984887---7788999999999999999999999999999999999997499


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             64005889999999999999999999971767788831347865587788520458877999999999875568999999
Q gi|254780473|r  144 RDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGINLVVTII  223 (671)
Q Consensus       144 rdlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iNfi~TI~  223 (671)
T Consensus        78 ~dla~Prln~~s~wl~~~g~~l~~~s~~~g~~~~~gwT~Y~Pl~~~~~~~~~~~~~~~~g~~l~~v~s~l~~in~~~Ti~  157 (463)
T cd00919          78 RDLAFPRLNNLSFWLFPPGLLLLLSSVLVGGGAGTGWTFYPPLSTLSYSSGVGVDLAILGLHLAGVSSILGAINFITTIL  157 (463)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             74210889999999877777784734303778877627735730134788850799999999999999999999999999


Q ss_pred             HHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             72368988313315666899999999997333578889987776329801146543210132212333401257999987
Q gi|254780473|r  224 KMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILVLP  303 (671)
Q Consensus       224 ~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYIliLP  303 (671)
T Consensus       158 ~~R~~g~~~~~~pl~~w~~~~t~il~~~~~p~l~~~~~~~l~d~~~~~~f~~~~~gg~~ll~~~LfW~fGHp~Vyi~ilP  237 (463)
T cd00919         158 NMRAPGMTLDKMPLFVWSVLVTAILLLLALPVLAAALVMLLLDRNFGTSFFDPAGGGDPVLYQHLFWFFGHPEVYILILP  237 (463)
T ss_pred             HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             83869998111639999999999999999778888888887420247322346678771055543465078712213966


Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99999999853105640266899999999999975332210224787588998765334678898779999878742587
Q gi|254780473|r  304 AFGIFSEVVATFSGKRLFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFNWLFTMRLG  383 (671)
Q Consensus       304 a~Gi~seiip~fs~kplfgy~~~v~A~~~i~~lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgvkiFnwl~Tl~~G  383 (671)
T Consensus       238 a~g~~~~iip~~~~rpl~s~~~~~~a~~~i~~~~~~vw~HHmf~~g~~~~~~~~~~~~T~~i~iPs~~~~f~~~~Tl~~~  317 (463)
T cd00919         238 AFGAISEIIPTFSGKPLFGYKLMVYAFLAIGFLSFLVWAHHMFTVGLPVDTRAYFTAATMIIAVPTGIKVFNWLATLWGG  317 (463)
T ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             77568764498608984107999999999999997762133226788589999999999999876899999999876147


Q ss_pred             CCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf             30224379999999999998875565303432111212742204478999999999999999999624430767471689
Q gi|254780473|r  384 KVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWG  463 (671)
Q Consensus       384 ~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~lg  463 (671)
T Consensus       318 ~~~~~~~~~~~~~~i~~f~~GG~tGi~~a~~~~d~~~H~T~~VvgHFH~~~~~~~~~~~~~~~y~~~P~~~gr~~~~~l~  397 (463)
T cd00919         318 RIRFDPPMLFALGFLFLFTIGGLTGVVLANVPLDIVLHDTYYVVAHFHYVLSGGVVFAIFAGLYYWFPKMTGRMLSEKLG  397 (463)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             60146079999999999997445505303655573525875898888874887999999999999999996751328999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999987640530300258700579999999999999999999999999997
Q gi|254780473|r  464 KVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSF  530 (671)
Q Consensus       464 k~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S~  530 (671)
T Consensus       398 ~~~fwl~~iG~~~~~~~m~~~Gl~G~pRR~~~~~-~~~~~~~~~~tvga~i~~~~~~~f~~~l~~s~  463 (463)
T cd00919         398 KIHFWLWFIGFNLTFFPMHFLGLLGMPRRYADYP-DGFAPWNFISSVGAFILGLGLLLFLGNLFLSL  463 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999986489863246786-77899999999999999999999999999979