>1v54_A Cytochrome C oxidase polypeptide I; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.24.1.1 PDB: 1oco_A* 1occ_A* 1ocz_A* 1ocr_A* 1v55_A* 2dyr_A* 2dys_A* 2eij_A* 2eik_A* 2eil_A* 2eim_A* 2ein_A* 2occ_A* 2zxw_A* 3abk_A* 3abl_A* 3abm_A* 3ag1_A* 3ag2_A* 3ag3_A* ...

Probab=100.00 E-value=0 Score=1283.37 Aligned_cols=511 Identities=37% Similarity=0.760 Sum_probs=501.4 Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH Q ss_conf 44303000014799999999999999999999999999850767566776687898999999999999999999999-99 Q gi|254780473|r 54 LWKEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMIT-GI 132 (671) Q Consensus 54 lw~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~-G~ 132 (671) .||+|++||||||||++|++++++++++|+++|++||+||+.|+ ..+.++|+|||++|+||++|+|+++||++. || T Consensus 2 f~~~w~~t~dHK~IG~~Yl~~~~~~~l~G~~~alliR~eL~~p~---~~~~~~~~Yn~~~T~HG~~MiFf~~mP~~~ggF 78 (514) T 1v54_A 2 FINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPG---TLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGF 78 (514) T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS---CSSCSHHHHHHHHHHHHHHHHHTTHHHHHTTHH T ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 57785002778999999999999999999999999999874897---667972289998999999999999999999999 Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 99999986498640058899999999999999999999717677888313478655877885204588779999999998 Q gi|254780473|r 133 MNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTT 212 (671) Q Consensus 133 ~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsl 212 (671) +||++|+|+|+|||||||+|++|||+++.|.+++..|.+.++++++|||+|||||+..++++.++|++++++++.|+||+ T Consensus 79 gn~lvPl~iga~dmafPRlN~~sfWl~~~~~~ll~~s~~~~~g~~~GWT~YpPLs~~~~~~~~~~d~~i~~l~l~gissi 158 (514) T 1v54_A 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158 (514) T ss_dssp HHHHHHHHTTCSSCSSHHHHHHHHHTHHHHHHHHHHHHHSTTCCCSTTTTCTTTTSTTTTCSSHHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 99999997699864218799999999999999999999628999986862532224788898599999999999999999 Q ss_pred HHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHH Q ss_conf 75568999999723689883133156668999999999973335788899877763298011465432101322123334 Q gi|254780473|r 213 LSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIW 292 (671) Q Consensus 213 l~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~f 292 (671) ++++||++||+++|+|||+++|+|+|+|+.++|++++++++|+|+++++++++||++|++||+++.||||+|||||||+| T Consensus 159 l~~iNfi~Ti~~~r~~gm~~~~~plf~Ws~~~ts~l~l~~~PvLa~a~~~l~~dr~~g~~ff~~~~GgdplL~qhLFWff 238 (514) T 1v54_A 159 LGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238 (514) T ss_dssp HHHHHHHHHHHHSSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCGGGTCCHHHHHHHHHHH T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHH T ss_conf 99999999999847799987765138899999999999999999999999999986597125777785798999999990 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 012579999879999999985310-5640266899999999999975332210224787588998765334678898779 Q gi|254780473|r 293 GHPEVYILVLPAFGIFSEVVATFS-GKRLFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGA 371 (671) Q Consensus 293 GHPeVYIliLPa~Gi~seiip~fs-~kplfgy~~~v~A~~~i~~lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgv 371 (671) ||||||+++||++|++||++|++| |||+|||+.+++|+++|+++|+.||+||||++|++++.+.+|+++||+|++||++ T Consensus 239 gHPeVYiliLPa~G~~s~ii~~~s~rk~lfg~~~~~~a~~~i~~ls~~VW~HHmft~G~~~~~~~~f~~~T~~IavPt~i 318 (514) T 1v54_A 239 GHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGV 318 (514) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCTTHHHHHHHHHHHHHHTTSCGGGGCTTSCCCHHHHHHHHHHHHHTHHHHHH T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 78188898987889999999998389877432899999999999998884420446798667899999999999998899 Q ss_pred HHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99987874258730224379999999999998875565303432111212742204478999999999999999999624 Q gi|254780473|r 372 KIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFP 451 (671) Q Consensus 372 kiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~P 451 (671) |+|||++|+|+|++|+++||+|+++|+++|++||+||+++|+.+.|.++||||||||||||++.+|+++++||++|||+| T Consensus 319 ~vf~w~aTl~~g~i~~~~p~l~~l~fi~~F~~GG~tGi~~a~~~~d~~lHdTyfVvaHFH~vl~~g~v~~~~a~~y~w~P 398 (514) T 1v54_A 319 KVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFP 398 (514) T ss_dssp HHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTBHHHHHHHHHHHTTHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHH T ss_conf 99999999848877798789999999999998987678603663013322554313415776441899999999999999 Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 43076747168999999999999999999999876405303002587005799999999999999999999999999974 Q gi|254780473|r 452 KAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFL 531 (671) Q Consensus 452 k~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S~~ 531 (671) |++||++|||++|+|||++++|+|++|+|||++|++|||||+++|++ +|++||+++++|++++++|++++++|++.|++ T Consensus 399 k~~Gr~~~e~l~~~~fwl~fiG~~~~f~pm~~lGl~GmpRR~~~Y~~-~~~~~n~~~s~G~~i~~~~~~~f~~~~~~s~~ 477 (514) T 1v54_A 399 LFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPD-AYTMWNTISSMGSFISLTAVMLMVFIIWEAFA 477 (514) T ss_dssp HHHSBCCCHHHHHHHHHHHHHHHHHHHTHHHHHHHTTCBTTCSSCCG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 87482514789999999999999999999999866999772677727-68999999999999999999999999999998 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC Q ss_conf 4953568999899997101269981199894759607845 Q gi|254780473|r 532 NRSKLQDTIGDPWDGRTLEWSISSPSPQYNFAFTPIVSTI 571 (671) Q Consensus 532 ~~~~~~~~~~dPW~~~tLEW~~~sPpp~~nF~~~P~v~~~ 571 (671) +||++. +|||+++||||+++||||+|||++.|+|+.+ T Consensus 478 ~~~~~~---~~pw~~~tlEW~~~sPpp~~nF~~~p~v~~~ 514 (514) T 1v54_A 478 SKREVL---TVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514 (514) T ss_dssp HCCBBC---CCTTGGGCGGGTTCSSCCSSCCSSCCEECCC T ss_pred HCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 488888---9999999800076999998788999835789

HHsearch results for GI: 254780473 and protein with PDBid: 1v54_A