HHsearch results for GI: 254780473 and protein with PDBid: 1xme_A
>1xme_A Cytochrome C oxidase polypeptide I; cytochrome oxidase, heme, heme-AS, integral membrane protein, oxidoreductase; HET: BNG HEM HAS; 2.30A {Thermus thermophilus} SCOP: f.24.1.1 PDB: 2qpe_A* 2qpd_A* 3bvd_A* 1ehk_A* 3eh5_A* 3eh3_A* 3eh4_A*
Probab=100.00 E-value=0 Score=945.46 Aligned_cols=489 Identities=23% Similarity=0.350 Sum_probs=452.0
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 303000014799999999999999999999999999850767566---77668789899999999999999999999999
Q gi|254780473|r 56 KEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGG---EGYLDAHHYDQIFTAHGVIMIFFVAMPMITGI 132 (671)
Q Consensus 56 ~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~---~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~ 132 (671)
++|++|+||||||++|+++|++++++|+++|+++|.|++.|+... ....++|+|||++|+||++|+|++++|++.|+
T Consensus 15 ~r~~~~~~~k~i~~~yl~~a~~~lliG~~~gll~rl~l~~~~~~~~~~~~~~~~~~Y~q~~T~HG~~mif~f~~~~~~g~ 94 (568)
T 1xme_A 15 SRVYEAYPEKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAI 94 (568)
T ss_dssp CHHHHHCTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTTCCCHHHHHHHSTTCCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 16885587679999999999999999999999999996198644441113677114657359999999999999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999986498640058899999999999999999999717677888313478655877885204588779999999998
Q gi|254780473|r 133 MNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTT 212 (671)
Q Consensus 133 ~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsl 212 (671)
+||++|+|+|+||+ +|+|++|||++..|.++...|++.|+ +++|||+|||||+ .+.+.+|+.+..+|++
T Consensus 95 ~~y~vp~~lg~r~~--~~l~~~sfwl~~~g~vl~~~s~~~G~-~~~gwt~Y~PLs~--------~~~~~ig~~l~vv~~~ 163 (568)
T 1xme_A 95 MVYLPARELNMRPN--MGLMWLSWWMAFIGLVVAALPLLANE-ATVLYTFYPPLKG--------HWAFYLGASVFVLSTW 163 (568)
T ss_dssp HHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHTTS-CCSTTTTCTTBCC--------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCEECCCCCC--------CCCHHHHHHHHHHHHH
T ss_conf 99999998299964--25899999999999999999980688-7765444576445--------5320220799999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 75568999999723689883133156668999999999973335788899877763298011465432101322123334
Q gi|254780473|r 213 LSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIW 292 (671)
Q Consensus 213 l~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~f 292 (671)
+ ++|++.|+.++|++|++..|+|+|+|+.++++++++++.|+++++..++++||.+| +..||||+|||||||+|
T Consensus 164 ~-~~~~~~t~~~~r~~~~~~~~~Pl~~w~~~~t~~l~~~a~~~l~~~~~~~ll~~~~~-----~~~ggdplL~q~LFWff 237 (568)
T 1xme_A 164 V-SIYIVLDLWRRWKAANPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPWSFG-----LVEGVDPLVARTLFWWT 237 (568)
T ss_dssp H-HHHHHHHHHHHHHHSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT-----SCSEECHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHC
T ss_conf 9-99999999998248998553359999999999999975078889999999864156-----56785587888889871
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01257999987999999998531056402668999999999999753322102247-87588998765334678898779
Q gi|254780473|r 293 GHPEVYILVLPAFGIFSEVVATFSGKRLFGYNSMVYATLAITILSYTVWLHHFFTM-GSGANVNAFFGIMTMVIAVPTGA 371 (671)
Q Consensus 293 GHPeVYIliLPa~Gi~seiip~fs~kplfgy~~~v~A~~~i~~lsf~VW~HHmFt~-G~~~~~~~~F~i~Tm~IaIPTgv 371 (671)
||||||++++|++|++||++|+++|||+|||+.+++++++++++|+.||.||||++ |++++.+.+|++.|++|++||++
T Consensus 238 GHp~Vyi~ilPa~g~~y~iip~~sgkplfs~~~~~~af~~~~~l~~~v~~HHmf~~~g~~~~~~~~~~~~T~~i~iPs~~ 317 (568)
T 1xme_A 238 GHPIVYFWLLPAYAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLM 317 (568)
T ss_dssp HTHHHHHHHHHHHHHHHHTHHHHHTSCBSCHHHHHHHHHHHHHHSSTTGGGGCTTCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHEEHHHCCCCEEECCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 76499999999999999930110389621020577778878762102313011267787768999999999999999999
Q ss_pred -------------------HHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHH
Q ss_conf -------------------9998787425873022437999999999999887556530343211121274220447899
Q gi|254780473|r 372 -------------------KIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHN 432 (671)
Q Consensus 372 -------------------kiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHy 432 (671)
|+|||++|+++|+++++.++++.++ |++||+||+++|+.++|.++||||||||||||
T Consensus 318 ~~f~~~~tl~~~~~~~~g~~if~W~~tl~~~~~~~~~~~l~~~~----f~~gG~tGv~~a~~~in~~~H~T~~VvaHfH~ 393 (568)
T 1xme_A 318 TAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLG----FIPGGAGGIVNASFTLDYVVHNTAWVPGHFHL 393 (568)
T ss_dssp HHHHHHHHHHHHHHHTTCCSTTHHHHHSCTTCHHHHHHHHHHHH----HHHHHHHHHHHTSGGGHHHHTTBTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHH----HHHHCCCHHHHCCCCCCHHHHCCCEEEEEEEE
T ss_conf 99999999875022367852453777763898578999999999----99625205654455125988088567665202
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC--CCC--CHHHHHH
Q ss_conf 9999999999999999624430767471---68999999999999999999999876405303002--587--0057999
Q gi|254780473|r 433 TIIGGVVFGLFAGIVYWFPKAFGYQLNS---FWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQ--YED--TTLQVYY 505 (671)
Q Consensus 433 vl~gg~vf~~fagiyyW~Pk~~Gr~l~e---~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~--y~~--~~~~~~n 505 (671)
++.+++++++||++|||+||++||+++| |++++|||++++|++++|+|||++|++|||||.+. |++ ++++++|
T Consensus 394 ~l~g~~~~~~~g~~y~~~P~ltGr~l~~~~~kL~~~~fwl~~iG~~~~f~~m~~~Gl~G~pRR~~~~~~~~~~~~~~~~~ 473 (568)
T 1xme_A 394 QVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLLNVPRRAYIAQVPDAYPHAAVPM 473 (568)
T ss_dssp HTTTHHHHHHHHTHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBSSCCGGGSGGGCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 18999999999999999999968820178999999999999999999999999986067865465677337788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 999999999999999999999999744953568999899997101269981199894759607
Q gi|254780473|r 506 VVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWDGRTLEWSISSPSPQYNFAFTPIV 568 (671)
Q Consensus 506 ~istiGa~l~~~g~l~f~~nl~~S~~~~~~~~~~~~dPW~~~tLEW~~~sPpp~~nF~~~P~v 568 (671)
+++++|++++.+|+++|++|++.|+++|||+++ |||+..++||+++||||++||..+|..
T Consensus 474 ~~~~ig~~i~~~g~llf~~nl~~s~~~~~~~~~---~~~~p~~~~~~~~~p~~~~~~~~l~~~ 533 (568)
T 1xme_A 474 VFNVLAGIVLLVALLLFIYGLFSVLLSRERKPE---LAEAPLPFAEVISGPEDRRLVLAMDRI 533 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHH---HHSSCCCCCCBCCCSSHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999999999999999999999984676999---999998600036799999987458871