Query gi|254780473|ref|YP_003064886.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 671
No_of_seqs 316 out of 1284
Neff 5.0
Searched_HMMs 13730
Date Wed Jun 1 06:29:59 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780473.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v54a_ f.24.1.1 (A:) Mitochon 100.0 0 0 1289.3 56.8 511 54-571 2-514 (514)
2 d3dtua1 f.24.1.1 (A:14-551) Ba 100.0 0 0 1256.2 53.9 506 52-562 1-538 (538)
3 d1ffta_ f.24.1.1 (A:) Cytochro 100.0 0 0 1187.1 51.8 501 62-562 1-501 (501)
4 d1xmea1 f.24.1.1 (A:14-562) Ba 100.0 0 0 916.4 37.8 481 64-568 4-514 (549)
5 d1xmea1 f.24.1.1 (A:14-562) Ba 98.1 0.00012 8.8E-09 46.2 15.1 181 104-323 206-403 (549)
6 d3dtua1 f.24.1.1 (A:14-551) Ba 97.6 0.0024 1.8E-07 37.3 14.3 259 210-491 100-388 (538)
7 d1ffta_ f.24.1.1 (A:) Cytochro 97.2 0.0068 4.9E-07 34.3 13.9 80 317-398 173-272 (501)
8 d1v54a_ f.24.1.1 (A:) Mitochon 95.6 0.054 4E-06 28.1 14.4 174 214-399 76-281 (514)
9 d1qe3a_ c.69.1.1 (A:) Thermoph 13.4 21 0.0015 10.5 0.6 39 540-580 441-481 (483)
10 d1kaca_ b.21.1.1 (A:) Adenovir 13.3 21 0.0016 10.5 0.9 26 543-569 2-27 (185)
No 1
>d1v54a_ f.24.1.1 (A:) Mitochondrial cytochrome c oxidase, subunit I {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=0 Score=1289.25 Aligned_cols=511 Identities=37% Similarity=0.760 Sum_probs=500.5
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 44303000014799999999999999999999999999850767566776687898999999999999999999999-99
Q gi|254780473|r 54 LWKEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMIT-GI 132 (671)
Q Consensus 54 lw~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~-G~ 132 (671)
.||+|+|||||||||++|++++++++++|+++|++||+||+.|+ ..+.++|.|||++|+||++|+|+++||++. ||
T Consensus 2 f~~~w~~t~dHK~iG~lYl~~~~~~~~~G~~lslliR~eL~~p~---~~~~~~~~Yn~~~T~Hg~iMiF~~~~P~~~ggF 78 (514)
T d1v54a_ 2 FINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPG---TLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGF 78 (514)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS---CSSCSHHHHHHHHHHHHHHHHHTTHHHHHTTHH
T ss_pred CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 47775102778999999999999999999999999999876997---667982389998999999999999999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999986498640058899999999999999999999717677888313478655877885204588779999999998
Q gi|254780473|r 133 MNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTT 212 (671)
Q Consensus 133 ~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsl 212 (671)
+||++|+|+|||||||||+|++|||+++.|.+++..|.+.++++++|||+|||||+.+++++.++|++++++++.|+||+
T Consensus 79 gn~lvPl~iGa~dmafPRlN~~sfWl~~~~~~ll~~s~~~~~g~~~GWT~YpPLs~~~~~~~~~vdl~i~~l~l~gissi 158 (514)
T d1v54a_ 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSI 158 (514)
T ss_dssp HHHHHHHHTTCSSCSSHHHHHHHHHTHHHHHHHHHHHHHSTTCCCSTTTTCTTTTSTTTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999985699643437789999999999999999997148889886634655204687898579999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 75568999999723689883133156668999999999973335788899877763298011465432101322123334
Q gi|254780473|r 213 LSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIW 292 (671)
Q Consensus 213 l~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~f 292 (671)
++++|+++||.|+|+|||+++|+|+|+|+.++|++++++++|+|+++++++++||++|++||+++.||||+|||||||+|
T Consensus 159 lg~iNfi~Ti~~~r~~gm~~~r~Plf~Ws~~vtsil~l~a~PvLa~a~~~ll~dr~~gt~ff~~~~Ggdp~L~qhLFWff 238 (514)
T d1v54a_ 159 LGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238 (514)
T ss_dssp HHHHHHHHHHHHSSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCGGGTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHC
T ss_conf 98899999998761688741466068999999999999998999999999999985798304777786799999999854
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 012579999879999999985310-5640266899999999999975332210224787588998765334678898779
Q gi|254780473|r 293 GHPEVYILVLPAFGIFSEVVATFS-GKRLFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGA 371 (671)
Q Consensus 293 GHPeVYIliLPa~Gi~seiip~fs-~kplfgy~~~v~A~~~i~~lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgv 371 (671)
||||||+++|||+|++||++|+++ |||+|||+.+++|+++|+++|+.||+|||||+|++++.|.+|+++|++|+|||++
T Consensus 239 gHPeVYi~iLPa~g~~s~ii~~~s~rk~~fg~~~~v~a~~~i~~ls~~Vw~HHmft~g~~~~~~~~f~~~T~~IaiPt~v 318 (514)
T d1v54a_ 239 GHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGV 318 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCTTHHHHHHHHHHHHHHTTSCGGGGCTTSCCCHHHHHHHHHHHHHTHHHHHH
T ss_pred CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 88602212998899999999987388745571999999999999820112346221388688899999999999987899
Q ss_pred HHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987874258730224379999999999998875565303432111212742204478999999999999999999624
Q gi|254780473|r 372 KIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFP 451 (671)
Q Consensus 372 kiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~P 451 (671)
|+|||++|+|+|++|+++||+|+++|+++|++||+||+++|+++.|.++||||||||||||++.+|++++++||+|||+|
T Consensus 319 kvfnwi~T~~~g~~~~~~~~l~~l~fi~~F~~GG~tGi~la~~~~D~~lHdTy~VVaHFH~vl~~g~v~~~~a~~y~w~P 398 (514)
T d1v54a_ 319 KVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFP 398 (514)
T ss_dssp HHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTBHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHEEECCCEEEEEEEEEEEEHHHHHHHHHHHHHHHH
T ss_conf 99999998618865688788999999999998642120115313331332550577323465344899999999999998
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43076747168999999999999999999999876405303002587005799999999999999999999999999974
Q gi|254780473|r 452 KAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFL 531 (671)
Q Consensus 452 k~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S~~ 531 (671)
|++||++|||++|+|||++++|+|++|+|||++|++|||||+++|++ +|++||+++++|+++++++++++++|++.|++
T Consensus 399 k~~Gr~~~e~l~~~~f~~~fiG~~~~f~pmh~lGl~GmpRR~~~Y~~-~~~~~n~~~siG~~i~~~~~~~f~~~~~~s~~ 477 (514)
T d1v54a_ 399 LFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPD-AYTMWNTISSMGSFISLTAVMLMVFIIWEAFA 477 (514)
T ss_dssp HHHSBCCCHHHHHHHHHHHHHHHHHHHTHHHHHHHTTCBTTCSSCCG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15686067888999999999999999999999765899773667847-79999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 4953568999899997101269981199894759607845
Q gi|254780473|r 532 NRSKLQDTIGDPWDGRTLEWSISSPSPQYNFAFTPIVSTI 571 (671)
Q Consensus 532 ~~~~~~~~~~dPW~~~tLEW~~~sPpp~~nF~~~P~v~~~ 571 (671)
+|||+. .|||+++||||+++||||+|||++.|+|+-+
T Consensus 478 ~~~~~~---~~pw~~~tlEW~~~sPpp~~nF~~~p~v~~~ 514 (514)
T d1v54a_ 478 SKREVL---TVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK 514 (514)
T ss_dssp HCCBBC---CCTTGGGCGGGTTCSSCCSSCCSSCCEECCC
T ss_pred HCCCCC---CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 588778---9999999821066999998787999824789
No 2
>d3dtua1 f.24.1.1 (A:14-551) Bacterial aa3 type cytochrome c oxidase subunit I {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=100.00 E-value=0 Score=1256.15 Aligned_cols=506 Identities=39% Similarity=0.808 Sum_probs=487.9
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC------------------------CCCCCHH
Q ss_conf 2344303000014799999999999999999999999999850767566------------------------7766878
Q gi|254780473|r 52 GYLWKEWFTSVDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGG------------------------EGYLDAH 107 (671)
Q Consensus 52 ~~lw~~wltt~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~------------------------~~~l~~~ 107 (671)
|..|+||+|||||||||++|++++++++++|+++|++||+||+.|.... ....++|
T Consensus 1 r~~~~~wl~t~dHK~IG~~Yl~~~~~~~~~G~~~alliR~eL~~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (538)
T d3dtua1 1 RGFFTRWFMSTNHKDIGVLYLFTGGLVGLISVAFTVYMRMELMAPGVQFMCAEHLESGLVKGFFQSLWPSAVENCTPNGH 80 (538)
T ss_dssp CCHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCSSSBGGGGSSCHHHHHHHHTSCCCGGGCCBCHH
T ss_pred CCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 96102100047789999999999999999999999999999748863101331101111111000011121123578710
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCCCCC
Q ss_conf 98999999999999999999999-99999999864986400588999999999999999999997176-----7788831
Q gi|254780473|r 108 HYDQIFTAHGVIMIFFVAMPMIT-GIMNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGE-----FASVGWL 181 (671)
Q Consensus 108 ~Ynq~~T~HG~~Mif~~a~p~~~-G~~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~-----~~~~GWt 181 (671)
+|||++|+||++|||+++||.+. ||+||++|+|+|||||||||+|++|||++++|.+++..|+++++ ++++|||
T Consensus 81 ~Yn~l~T~HG~iMiFf~v~P~l~ggfgN~lvPl~iGA~DmafPRlN~~sfWl~~~~~~l~~~s~~~~~~~~~~g~~~GWt 160 (538)
T d3dtua1 81 LWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTSLAVASLFAPGGNGQLGSGIGWV 160 (538)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHTTTHHHHHHHHHHTCSSCSCHHHHHHHHHHHHHHHHHHHHHTTSBCGGGSBSCCSTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 68898998999999999999999999999999866996310387899999998899999999883277776668877850
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34786558778852045887799999999987556899999972368988313315666899999999997333578889
Q gi|254780473|r 182 AYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGINLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLF 261 (671)
Q Consensus 182 ~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iNfi~TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ 261 (671)
.|||+|.. +++.++|+|+++++++|+||+++++|+++||++||+|||+++|+|+|+|+.++|++++++++|+|+++++
T Consensus 161 ~y~Pls~~--~~~~~vd~~i~~l~l~gissi~~~iN~i~Ti~~~R~~gm~~~~~Plf~w~~l~t~~l~l~~~PvL~~~~~ 238 (538)
T d3dtua1 161 LYPPLSTS--ESGYSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAIT 238 (538)
T ss_dssp TCTTHHHH--CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 45454336--8985099999999999999999999999999997689997220249999999999999999999999999
Q ss_pred HHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98777632980114654321013221233340125799998799999999853105640266899999999999975332
Q gi|254780473|r 262 LLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILVLPAFGIFSEVVATFSGKRLFGYNSMVYATLAITILSYTVW 341 (671)
Q Consensus 262 ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYIliLPa~Gi~seiip~fs~kplfgy~~~v~A~~~i~~lsf~VW 341 (671)
++++||++|++||+++.||||+|||||||+||||||||+++|++|++||++|++||||+|||+.+++|+++|+++|+.||
T Consensus 239 ~ll~Dr~~gt~ff~~~~GgdplL~qhLFWffgHPeVYi~ilPa~Gi~s~ii~~~s~k~lfg~~~~~~a~~~i~~ls~~Vw 318 (538)
T d3dtua1 239 MLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIATFAKKPIFGYLPMVYAMVAIGVLGFVVW 318 (538)
T ss_dssp HHHHHHHSCCCTTCGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHTTSCG
T ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999827985327777857899999999947870240101378999999986047655470899999999999873231
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
Q ss_conf 21022478758899876533467889877999987874258730224379999999999998875565303432111212
Q gi|254780473|r 342 LHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLH 421 (671)
Q Consensus 342 ~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgvkiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lH 421 (671)
+||||++|++++.+.+|+++|++|++||++|+|||++|+|+|++|+++||+|+++|+++|++||+||+++|+.++|.++|
T Consensus 319 ~HHmf~~g~~~~~~~~f~~~T~~IaiPs~i~vfnwl~Tl~gg~~~~~~p~l~~l~fi~~F~iGG~tGi~la~~~~d~~~H 398 (538)
T d3dtua1 319 AHHMYTAGLSLTQQSYFMMATMVIAVPTGIKIFSWIATMWGGSIELKTPMLWALGFLFLFTVGGVTGIVLSQASVDRYYH 398 (538)
T ss_dssp GGGCTTSSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTSCBCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHT
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
T ss_conf 04643667761155368999999999789999999999986063657289999999999997401200012025432004
Q ss_pred CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHH
Q ss_conf 74220447899999999999999999962443076747168999999999999999999999876405303002587005
Q gi|254780473|r 422 NSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYEDTTL 501 (671)
Q Consensus 422 nT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~~~~~ 501 (671)
|||||||||||++.+++++++||++|||+||++||++|||++|+|||++++|+|++|+|||++|++|||||+++|++ +|
T Consensus 399 dTy~VvaHFH~v~~~g~v~~~~a~~y~w~Pk~tGr~~~~~l~~~hfwl~~iG~~l~f~pm~~~Gl~GmpRR~~~y~~-~~ 477 (538)
T d3dtua1 399 DTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKMSGRQYPEWAGKLHFWMMFVGANLTFFPQHFLGRQGMPRRYIDYPE-AF 477 (538)
T ss_dssp TBHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHSBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBSSCSCCCG-GG
T ss_pred CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH-HH
T ss_conf 64125630012102089999999999999998500005789999999999999999999999874888662467817-79
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf 79999999999999999999999999997449535689998999--97101269981199894
Q gi|254780473|r 502 QVYYVVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWD--GRTLEWSISSPSPQYNF 562 (671)
Q Consensus 502 ~~~n~istiGa~l~~~g~l~f~~nl~~S~~~~~~~~~~~~dPW~--~~tLEW~~~sPpp~~nF 562 (671)
.+||+++++|++++++|+++|++|++.|+++|||+.+ +|||| +|||||+++||||+|||
T Consensus 478 ~~~n~i~tiG~~i~~~g~l~f~~~~~~s~~~g~~~~~--~~~w~~~a~tlEW~~~sppp~~nF 538 (538)
T d3dtua1 478 ATWNFVSSLGAFLSFASFLFFLGVIFYTLTRGARVTA--NNYWNEHADTLEWTLTSPPPEHTF 538 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCCS--SCSSCTTCCSGGGGSCSSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999999999999999999999983995878--998679999851388999997789
No 3
>d1ffta_ f.24.1.1 (A:) Cytochrome O ubiquinol oxidase, subunit I {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=1187.05 Aligned_cols=501 Identities=69% Similarity=1.291 Sum_probs=495.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 01479999999999999999999999999985076756677668789899999999999999999999999999999864
Q gi|254780473|r 62 VDHKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGGEGYLDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVVPLQI 141 (671)
Q Consensus 62 ~dHK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~~n~lvPl~i 141 (671)
|||||||++|+++|++++++|+++|++||.||+.|+.+...++++|.|||++|+||++|+|++++|++.|++||++|+|+
T Consensus 1 vdHK~Ig~~Yl~~~~~~~~iG~~~alliR~el~~~~~~~~~~~~~~~Y~~~~T~HG~~Mif~~~~p~~~Gf~n~lvPl~l 80 (501)
T d1ffta_ 1 VDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQI 80 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSSSSCTTCCCSTHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98799999999999999999999999999998617888767788677888559999999999999999999999999976
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98640058899999999999999999999717677888313478655877885204588779999999998755689999
Q gi|254780473|r 142 GARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGINLVVT 221 (671)
Q Consensus 142 GardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iNfi~T 221 (671)
|+|||||||+|++|||+++.|.+++..|.+.++.+++|||.|||++..+++|+.++|++++|+++.++||+++++|+++|
T Consensus 81 Ga~dmafPrln~~sfWl~~~~~~l~~~s~~~~~~~~~gwt~y~pl~~~~~~~~~~~~l~i~gl~l~gissil~~in~i~T 160 (501)
T d1ffta_ 81 GARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVT 160 (501)
T ss_dssp CCSSCSSHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSTTTTCTTTSSCSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99731107589999999999999865012344655432322444345678996358999999999999999999999999
Q ss_pred HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99723689883133156668999999999973335788899877763298011465432101322123334012579999
Q gi|254780473|r 222 IIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYILV 301 (671)
Q Consensus 222 I~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYIli 301 (671)
+.|+|+|||+++|+|+|+|+.++|++++++++|+++++++++++||++|++||+++.||||+|||||||+|||||||+++
T Consensus 161 i~~~R~~gm~~~~~PLf~w~~~~t~il~~la~pvla~~~~~llld~~~g~~ff~~~~ggdp~l~q~LFWffgHP~VYi~i 240 (501)
T d1ffta_ 161 ILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILI 240 (501)
T ss_dssp HHHCSCTTCCGGGCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCCCSSCTTTTCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCCCCHHHCCCHHHEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCEEEEEH
T ss_conf 99853799972105542013224444376688899988878630100487766677787510202201204784123315
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87999999998531056402668999999999999753322102247875889987653346788987799998787425
Q gi|254780473|r 302 LPAFGIFSEVVATFSGKRLFGYNSMVYATLAITILSYTVWLHHFFTMGSGANVNAFFGIMTMVIAVPTGAKIFNWLFTMR 381 (671)
Q Consensus 302 LPa~Gi~seiip~fs~kplfgy~~~v~A~~~i~~lsf~VW~HHmFt~G~~~~~~~~F~i~Tm~IaIPTgvkiFnwl~Tl~ 381 (671)
+|++|++||++|+++|||+|||+.+++|+++++++|+.||.||||++|.++..+.+|++.|++|++||++|+|||+.|+|
T Consensus 241 lPa~g~~~~iip~~~~~~lf~~~~~~~a~~~i~~ls~~vw~HH~~~~g~~~~~~~~~~~~T~~iaiPs~~~~f~w~~tl~ 320 (501)
T d1ffta_ 241 LPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMY 320 (501)
T ss_dssp HHHHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHHTTSSCGGGGTTTTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 38999999998985399653405789999988872101000320145667046677889999999999999999988835
Q ss_pred CCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 87302243799999999999988755653034321112127422044789999999999999999996244307674716
Q gi|254780473|r 382 LGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSF 461 (671)
Q Consensus 382 ~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~ 461 (671)
+|++|+++|++|+++|+++|++||+||+++|+.++|.++||||||||||||++.+|+++++||++|||+||+|||++|||
T Consensus 321 ~g~~~~~~~~l~~l~fi~~F~~GG~tGi~~a~~~~d~~~H~T~~VvgHFH~~~~~~~v~~~~~~~y~~~P~l~Gr~l~~~ 400 (501)
T d1ffta_ 321 QGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNET 400 (501)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTTTBHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 87313360589999999999987554553202578888503212301321355307999999999999988646122469
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 89999999999999999999998764053030025870057999999999999999999999999999744953568999
Q gi|254780473|r 462 WGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYEDTTLQVYYVVALLGAVLIGIGVFSFVLSFIVSFLNRSKLQDTIG 541 (671)
Q Consensus 462 lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~~~~~~~~n~istiGa~l~~~g~l~f~~nl~~S~~~~~~~~~~~~ 541 (671)
++|+|||++++|++++|+|||++|++|||||+++|+|++|+++|+++++|+.++++|++++++|++.|+++|++.++.++
T Consensus 401 l~~~~f~~~~iG~~~~f~pm~~~G~~G~pRR~~~y~~~~~~~~~~~~~~g~~i~~~~~~~f~~~~~~s~~~~~~~~~~~~ 480 (501)
T d1ffta_ 401 WGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTG 480 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBTTCSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999999999997748988776778874489999999999999999999999999999995204787878
Q ss_pred CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 899997101269981199894
Q gi|254780473|r 542 DPWDGRTLEWSISSPSPQYNF 562 (671)
Q Consensus 542 dPW~~~tLEW~~~sPpp~~nF 562 (671)
|||+++||||+||||||+|||
T Consensus 481 npw~~~tlEW~~~sppp~~nf 501 (501)
T d1ffta_ 481 DPWGGRTLEWATSSPPPFYNF 501 (501)
T ss_dssp SCTTCCCTTTTSCSSCCTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 999997854698999998889
No 4
>d1xmea1 f.24.1.1 (A:14-562) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=0 Score=916.40 Aligned_cols=481 Identities=23% Similarity=0.355 Sum_probs=444.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4799999999999999999999999999850767566---7766878989999999999999999999999999999986
Q gi|254780473|r 64 HKKIGIMYIILSLVMLFRGFADAIMMRLQQAIASGGG---EGYLDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVVPLQ 140 (671)
Q Consensus 64 HK~IGi~Yiv~a~~~ll~Gg~~allmR~qla~p~~~~---~~~l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~~n~lvPl~ 140 (671)
.||||++|+++|++++++|+++|+++|.|++.|+... ....++|+|||++|+||++|+|++++|++.|++||++|+|
T Consensus 4 ~k~i~~~yl~~a~~~lliG~~~gll~rl~l~~p~~~~~~~~~~~~~~~Y~~~~T~Hg~~mif~f~~~~~~g~~~y~vp~~ 83 (549)
T d1xmea1 4 EKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARE 83 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHTTTCCCHHHHHHHSTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02889999999999999999999999999719874433000277700340500899999999999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49864005889999999999999999999971767788831347865587788520458877999999999875568999
Q gi|254780473|r 141 IGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAYPPLSGISYSPGVGVDYYIWGLQIAGIGTTLSGINLVV 220 (671)
Q Consensus 141 iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~YpPLs~~~~spg~g~d~~i~gl~l~gigsll~~iNfi~ 220 (671)
+|+||+ +|+|++|||++..|.++..+|++.|+ +++|||+|||||+. +.+.+++.+..+|+++ ++|+++
T Consensus 84 lg~r~~--~~l~~~sfwl~~~g~vl~~~~~~~g~-~~~gwt~Y~PL~~~--------~~~~ig~~l~vv~~~~-~i~~~~ 151 (549)
T d1xmea1 84 LNMRPN--MGLMWLSWWMAFIGLVVAALPLLANE-ATVLYTFYPPLKGH--------WAFYLGASVFVLSTWV-SIYIVL 151 (549)
T ss_dssp HTCCCC--HHHHHHHHHHHHHHHHHHHHHHHTTS-CCSTTTTCTTBCCC--------HHHHHHHHHHHHHHHH-HHHHHH
T ss_pred CCCCCH--HHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHCCCCCCC--------CCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 199962--25899999999999999999997488-64102213464445--------4301289999999999-999999
Q ss_pred HHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99972368988313315666899999999997333578889987776329801146543210132212333401257999
Q gi|254780473|r 221 TIIKMRCPGMTMMKMPVFVWTAFCSNIMIIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYIL 300 (671)
Q Consensus 221 TI~~~RapGm~l~rmPlf~W~~l~tsil~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYIl 300 (671)
|+.++|+++++.+|+|+++|+.++++++++++.|+++++..++.+||++| +..||||+|||||||+|||||||++
T Consensus 152 t~~~~r~~~~~~~~~Pl~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~-----~~~g~d~~L~q~LFW~fGHp~Vyi~ 226 (549)
T d1xmea1 152 DLWRRWKAANPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPWSFG-----LVEGVDPLVARTLFWWTGHPIVYFW 226 (549)
T ss_dssp HHHHHHHHSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHT-----SCSEECHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-----CCCCCCEEEECCCHHHCCCCCCHHH
T ss_conf 99996668897210149999999999999997240677889999864047-----6778732442141110146631424
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHH---------
Q ss_conf 987999999998531056402668999999999999753322102247-8758899876533467889877---------
Q gi|254780473|r 301 VLPAFGIFSEVVATFSGKRLFGYNSMVYATLAITILSYTVWLHHFFTM-GSGANVNAFFGIMTMVIAVPTG--------- 370 (671)
Q Consensus 301 iLPa~Gi~seiip~fs~kplfgy~~~v~A~~~i~~lsf~VW~HHmFt~-G~~~~~~~~F~i~Tm~IaIPTg--------- 370 (671)
++|++|++||++|+++|||+|||+.++++++++.++|+.||.||||++ |++++.+.++++.|++|++||+
T Consensus 227 ilPa~g~~y~iip~~s~kplfs~~l~~~af~~i~~~~~~vg~HH~f~~~G~~~~~~~~~~~~T~~i~vPs~~~~f~~~~t 306 (549)
T d1xmea1 227 LLPAYAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAAS 306 (549)
T ss_dssp HHHHHHHHHHTHHHHHTSCBSCHHHHHHHHHHHHHHSSTTGGGGCTTCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98788772555420244404431078888999998510003655400057788899999999999999988999999999
Q ss_pred ----------HHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEHHHHHHHHHHHHHHH
Q ss_conf ----------9999878742587302243799999999999988755653034321112127422044789999999999
Q gi|254780473|r 371 ----------AKIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLAVPPADFTLHNSLFLVAHFHNTIIGGVVF 440 (671)
Q Consensus 371 ----------vkiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA~~~~D~~lHnT~fVVAHFHyvl~gg~vf 440 (671)
+|+|||++|+|+|+++++.++++.++ |.+||+||+++|+.++|.++|||||||||||+++.|++++
T Consensus 307 l~~~~~~~~g~~~f~Wl~tl~~~~~~~~~~~l~~~~----f~~gg~tG~~~a~~~~n~~~H~T~~VvgHfH~~~~g~~~~ 382 (549)
T d1xmea1 307 LEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLG----FIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTL 382 (549)
T ss_dssp HHHHHHHTTCCSTTHHHHHSCTTCHHHHHHHHHHHH----HHHHHHHHHHHTSGGGHHHHTTBTHHHHHHHHHTTTHHHH
T ss_pred HHHHCEECCCCCEEEEEEECCCCCHHHHHHHHHHHH----HHHHCCCCHHHCCCHHHHHHCCCCEECCCEEEEHHHHHHH
T ss_conf 986130237862244430306797678999999999----9851544112014328888536630003413442989999
Q ss_pred HHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC--C--CHHHHHHHHHHHHHH
Q ss_conf 99999999624430767471---6899999999999999999999987640530300258--7--005799999999999
Q gi|254780473|r 441 GLFAGIVYWFPKAFGYQLNS---FWGKVSFWCWFVGFYLAFMPLYALGLKGVTRRLSQYE--D--TTLQVYYVVALLGAV 513 (671)
Q Consensus 441 ~~fagiyyW~Pk~~Gr~l~e---~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpRR~~~y~--~--~~~~~~n~istiGa~ 513 (671)
+.||++|||+||++||+++| |++++|||++++|++++|+|||++|++|||||.++|+ | ++++++|+++++|+.
T Consensus 383 ~~~g~~y~~~P~ltGr~l~~~~~kL~~~~fwl~~iG~~~~~~~m~~~Gl~g~pRR~~~~~~~~~~~~~~~~~~~~~igg~ 462 (549)
T d1xmea1 383 TAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLLNVPRRAYIAQVPDAYPHAAVPMVFNVLAGI 462 (549)
T ss_dssp HHHHTHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBSSCCGGGSGGGCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999989986753558999999999999999999999999887626787604367731778888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 9999999999999999744953568999899997101269981199894759607
Q gi|254780473|r 514 LIGIGVFSFVLSFIVSFLNRSKLQDTIGDPWDGRTLEWSISSPSPQYNFAFTPIV 568 (671)
Q Consensus 514 l~~~g~l~f~~nl~~S~~~~~~~~~~~~dPW~~~tLEW~~~sPpp~~nF~~~P~v 568 (671)
++.+|+++|++|++.|+++|||+++ |||+..++||+++||||++||..+|..
T Consensus 463 i~~~g~l~f~~nl~~s~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~l~~~ 514 (549)
T d1xmea1 463 VLLVALLLFIYGLFSVLLSRERKPE---LAEAPLPFAEVISGPEDRRLVLAMDRI 514 (549)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCHH---HHSSCCCCCCBCCCSSHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999999999994777999---999998712257798899975558750
No 5
>d1xmea1 f.24.1.1 (A:14-562) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
Probab=98.14 E-value=0.00012 Score=46.16 Aligned_cols=181 Identities=17% Similarity=0.271 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 68789899999999999999999999999999999864986400588999999999999999999997176778883134
Q gi|254780473|r 104 LDAHHYDQIFTAHGVIMIFFVAMPMITGIMNFVVPLQIGARDVSFPFLNNFSFWMTVAGAVVIMCSLFIGEFASVGWLAY 183 (671)
Q Consensus 104 l~~~~Ynq~~T~HG~~Mif~~a~p~~~G~~n~lvPl~iGardlaFPrlna~sfWl~~~g~~l~~~S~~~g~~~~~GWt~Y 183 (671)
.+|..|..+|=--|---+.+...| ..|...+++|.+.| |++---|+..++||+..+ .|..++. +
T Consensus 206 ~d~~L~q~LFW~fGHp~Vyi~ilP-a~g~~y~iip~~s~-kplfs~~l~~~af~~i~~------~~~~vg~--H------ 269 (549)
T d1xmea1 206 VDPLVARTLFWWTGHPIVYFWLLP-AYAIIYTILPKQAG-GKLVSDPMARLAFLLFLL------LSTPVGF--H------ 269 (549)
T ss_dssp ECHHHHHHHHHHHHTHHHHHHHHH-HHHHHHHTHHHHHT-SCBSCHHHHHHHHHHHHH------HSSTTGG--G------
T ss_pred CCEEEECCCHHHCCCCCCHHHHHH-HHHHHEEEECCCCC-CCHHHCCHHHHHHHHHHH------HHHHCCC--C------
T ss_conf 732442141110146631424987-88772555420244-404431078888999998------5100036--5------
Q ss_pred CCCCCCCC-CCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC-CCCHHHCCHHHHH--------HHHHHHHH
Q ss_conf 78655877-8852045---887799999999987556899999972-368-9883133156668--------99999999
Q gi|254780473|r 184 PPLSGISY-SPGVGVD---YYIWGLQIAGIGTTLSGINLVVTIIKM-RCP-GMTMMKMPVFVWT--------AFCSNIMI 249 (671)
Q Consensus 184 pPLs~~~~-spg~g~d---~~i~gl~l~gigsll~~iNfi~TI~~~-Rap-Gm~l~rmPlf~W~--------~l~tsil~ 249 (671)
+.+ +||...+ +....-.+..+-|.+...|...|+... |.. |.+ +|.|- .+.+.++-
T Consensus 270 -----H~f~~~G~~~~~~~~~~~~T~~i~vPs~~~~f~~~~tl~~~~~~~~g~~-----~f~Wl~tl~~~~~~~~~~~l~ 339 (549)
T d1xmea1 270 -----HQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRG-----LFGWIRALPWDNPAFVAPVLG 339 (549)
T ss_dssp -----GCTTCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS-----TTHHHHHSCTTCHHHHHHHHH
T ss_pred -----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCC-----EEEEEEECCCCCHHHHHHHHH
T ss_conf -----5400057788899999999999999988999999999986130237862-----244430306797678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 99733357888998777632980114654321013221233340125799---998799999999853105640266
Q gi|254780473|r 250 IAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYINLIWIWGHPEVYI---LVLPAFGIFSEVVATFSGKRLFGY 323 (671)
Q Consensus 250 i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~LFW~fGHPeVYI---liLPa~Gi~seiip~fs~kplfgy 323 (671)
++.+-+-..+-.++ ....-|. ...|=.|.=||=...+ ..+-.+|.+|..+|+..+|++.+.
T Consensus 340 ~~~f~~gg~tG~~~------------a~~~~n~-~~H~T~~VvgHfH~~~~g~~~~~~~g~~y~~~P~ltGr~l~~~ 403 (549)
T d1xmea1 340 LLGFIPGGAGGIVN------------ASFTLDY-VVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDA 403 (549)
T ss_dssp HHHHHHHHHHHHHH------------TSGGGHH-HHTTBTHHHHHHHHHTTTHHHHHHHHTHHHHHHHHHCCCCCHH
T ss_pred HHHHHHHCCCCHHH------------CCCHHHH-HHCCCCEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998515441120------------1432888-8536630003413442989999999999999899867535589
No 6
>d3dtua1 f.24.1.1 (A:14-551) Bacterial aa3 type cytochrome c oxidase subunit I {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=97.55 E-value=0.0024 Score=37.31 Aligned_cols=259 Identities=17% Similarity=0.208 Sum_probs=100.6
Q ss_pred HHHHHHH-HHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHH
Q ss_conf 9987556-89999997236898831331566689999999-999733357888998777632980114654321013221
Q gi|254780473|r 210 GTTLSGI-NLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIM-IIAAFPILTATLFLLTLDRYIGTNFFTNHLGGNPMMYIN 287 (671)
Q Consensus 210 gsll~~i-Nfi~TI~~~RapGm~l~rmPlf~W~~l~tsil-~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GGdplL~q~ 287 (671)
-.+.++. |+++-. ...|+.|..-|+..+.+-.+..+.+ .+.++-+-... ... .-..|...+.|...-.+- ...
T Consensus 100 P~l~ggfgN~lvPl-~iGA~DmafPRlN~~sfWl~~~~~~l~~~s~~~~~~~-~~~--g~~~GWt~y~Pls~~~~~-~~v 174 (538)
T d3dtua1 100 PALFGGFGNYFMPL-HIGAPDMAFPRMNNLSYWLYVAGTSLAVASLFAPGGN-GQL--GSGIGWVLYPPLSTSESG-YST 174 (538)
T ss_dssp HHHTTTHHHHHHHH-HHTCSSCSCHHHHHHHHHHHHHHHHHHHHHTTSBCGG-GSB--SCCSTTTTCTTHHHHCSS-SHH
T ss_pred HHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCC--CCCCCCCCCCCCCCCCCC-CCH
T ss_conf 99999999999998-6699631038789999999889999999988327777-666--887785045454336898-509
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHH------HHCCCCCHHHHHHHHHHHHHHHHHHHH--------HH-HH----CCC
Q ss_conf 233340125799-99879999999985------310564026689999999999997533--------22-10----224
Q gi|254780473|r 288 LIWIWGHPEVYI-LVLPAFGIFSEVVA------TFSGKRLFGYNSMVYATLAITILSYTV--------WL-HH----FFT 347 (671)
Q Consensus 288 LFW~fGHPeVYI-liLPa~Gi~seiip------~fs~kplfgy~~~v~A~~~i~~lsf~V--------W~-HH----mFt 347 (671)
=+|.+|=-..=+ -++-+.-.+..++. +..|-|+|.....+.+.. .++++.| .. ++ +|.
T Consensus 175 d~~i~~l~l~gissi~~~iN~i~Ti~~~R~~gm~~~~~Plf~w~~l~t~~l--~l~~~PvL~~~~~~ll~Dr~~gt~ff~ 252 (538)
T d3dtua1 175 DLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWL--ILLALPVLAGAITMLLTDRNFGTTFFQ 252 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCCGGGSCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHSCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999999999999768999722024999999999999--999999999999999999827985327
Q ss_pred --CCCCH-HHHHHH---H-HHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCEE
Q ss_conf --78758-899876---5-33467889877999987874258730224379999999999998875565303-4321112
Q gi|254780473|r 348 --MGSGA-NVNAFF---G-IMTMVIAVPTGAKIFNWLFTMRLGKVRFEVPMMWTLGFMITFLIGGMTGVLLA-VPPADFT 419 (671)
Q Consensus 348 --~G~~~-~~~~~F---~-i~Tm~IaIPTgvkiFnwl~Tl~~G~ir~~~pml~~lgfi~~F~iGG~tGv~lA-~~~~D~~ 419 (671)
.|-+| ..+..| + -...++.+|.--.+..-+-+.-|.++.=...|.+++..+. +.|-....-.- ..+.
T Consensus 253 ~~~GgdplL~qhLFWffgHPeVYi~ilPa~Gi~s~ii~~~s~k~lfg~~~~~~a~~~i~--~ls~~Vw~HHmf~~g~--- 327 (538)
T d3dtua1 253 PSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIATFAKKPIFGYLPMVYAMVAIG--VLGFVVWAHHMYTAGL--- 327 (538)
T ss_dssp GGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHH--HHTTSCGGGGCTTSSC---
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH--HHHHHHHHCCCCCCCC---
T ss_conf 77785789999999994787024010137899999998604765547089999999999--9873231046436677---
Q ss_pred ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 127422044789999999999999999996244307674716899999999999999999999987640530
Q gi|254780473|r 420 LHNSLFLVAHFHNTIIGGVVFGLFAGIVYWFPKAFGYQLNSFWGKVSFWCWFVGFYLAFMPLYALGLKGVTR 491 (671)
Q Consensus 420 lHnT~fVVAHFHyvl~gg~vf~~fagiyyW~Pk~~Gr~l~e~lgk~~Fwl~~iGf~l~F~pm~~lGl~GmpR 491 (671)
..+.-+-|......-++-. -..+.=|.--+.|.+..-+- --++.+|+...|. +.|+.|...
T Consensus 328 ---~~~~~~~f~~~T~~IaiPs-~i~vfnwl~Tl~gg~~~~~~----p~l~~l~fi~~F~---iGG~tGi~l 388 (538)
T d3dtua1 328 ---SLTQQSYFMMATMVIAVPT-GIKIFSWIATMWGGSIELKT----PMLWALGFLFLFT---VGGVTGIVL 388 (538)
T ss_dssp ---CHHHHHHHHHHHHHTHHHH-HHHHHHHHHHHTTSCBCCCH----HHHHHHHHHHHHH---HHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHH---HHCCCCCCC
T ss_conf ---6115536899999999978-99999999999860636572----8999999999999---740120001
No 7
>d1ffta_ f.24.1.1 (A:) Cytochrome O ubiquinol oxidase, subunit I {Escherichia coli [TaxId: 562]}
Probab=97.16 E-value=0.0068 Score=34.29 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH-------------HHCCC--CCCCH-HHHHH---HH-HHHHHHHHHHHHHHHHH
Q ss_conf 56402668999999999999753322-------------10224--78758-89987---65-33467889877999987
Q gi|254780473|r 317 GKRLFGYNSMVYATLAITILSYTVWL-------------HHFFT--MGSGA-NVNAF---FG-IMTMVIAVPTGAKIFNW 376 (671)
Q Consensus 317 ~kplfgy~~~v~A~~~i~~lsf~VW~-------------HHmFt--~G~~~-~~~~~---F~-i~Tm~IaIPTgvkiFnw 376 (671)
|-|+|.+...+.+... +++..|-+ -++|. .|-++ ..|.. |+ -...+..+|.-.-+..-
T Consensus 173 ~~PLf~w~~~~t~il~--~la~pvla~~~~~llld~~~g~~ff~~~~ggdp~l~q~LFWffgHP~VYi~ilPa~g~~~~i 250 (501)
T d1ffta_ 173 KMPVFTWASLCANVLI--IASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEI 250 (501)
T ss_dssp GCCHHHHHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHCCCSSCTTTTCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HCCCHHHEEEEEEEEH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCEEEEEHHHHHHHHHHH
T ss_conf 0554201322444437--66888999888786301004877666777875102022012047841233153899999999
Q ss_pred HHHHCCCCCEECHHHHHHHHHH
Q ss_conf 8742587302243799999999
Q gi|254780473|r 377 LFTMRLGKVRFEVPMMWTLGFM 398 (671)
Q Consensus 377 l~Tl~~G~ir~~~pml~~lgfi 398 (671)
+-+.-|+++.-...+.+++..+
T Consensus 251 ip~~~~~~lf~~~~~~~a~~~i 272 (501)
T d1ffta_ 251 AATFSRKRLFGYTSLVWATVCI 272 (501)
T ss_dssp HHHHHTSCCSSHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHH
T ss_conf 8985399653405789999988
No 8
>d1v54a_ f.24.1.1 (A:) Mitochondrial cytochrome c oxidase, subunit I {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.63 E-value=0.054 Score=28.13 Aligned_cols=174 Identities=18% Similarity=0.249 Sum_probs=71.9
Q ss_pred HHH-HHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC--CHHHHHHHH
Q ss_conf 556-89999997236898831331566689999999-99973335788899877763298011465432--101322123
Q gi|254780473|r 214 SGI-NLVVTIIKMRCPGMTMMKMPVFVWTAFCSNIM-IIAAFPILTATLFLLTLDRYIGTNFFTNHLGG--NPMMYINLI 289 (671)
Q Consensus 214 ~~i-Nfi~TI~~~RapGm~l~rmPlf~W~~l~tsil-~i~a~PvL~~al~ll~lDr~~g~~FF~~~~GG--dplL~q~LF 289 (671)
++. |+++-. ...+|.|..-|+....+-.+..+.+ +..++-.-.+ ..-|..+|.|-.+. ++-.. --+
T Consensus 76 ggFgn~lvPl-~iGa~dmafPRlN~~sfWl~~~~~~ll~~s~~~~~g--------~~~GWT~YpPLs~~~~~~~~~-vdl 145 (514)
T d1v54a_ 76 GGFGNWLVPL-MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAG--------AGTGWTVYPPLAGNLAHAGAS-VDL 145 (514)
T ss_dssp THHHHHHHHH-HTTCSSCSSHHHHHHHHHTHHHHHHHHHHHHHSTTC--------CCSTTTTCTTTTSTTTTCSSH-HHH
T ss_pred HHHHHHHHHH-HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--------CCCCCEECCCCCCCCCCCCCH-HHH
T ss_conf 9999999998-569964343778999999999999999999714888--------988663465520468789857-999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHH------HHCCCCCHHHHHHHHHHHHHHHHHHHH-------------HHHHCCC--
Q ss_conf 3340125799-99879999999985------310564026689999999999997533-------------2210224--
Q gi|254780473|r 290 WIWGHPEVYI-LVLPAFGIFSEVVA------TFSGKRLFGYNSMVYATLAITILSYTV-------------WLHHFFT-- 347 (671)
Q Consensus 290 W~fGHPeVYI-liLPa~Gi~seiip------~fs~kplfgy~~~v~A~~~i~~lsf~V-------------W~HHmFt-- 347 (671)
|.+|--.+-+ -++-+.-.+..+.- +..|-|+|.....+-+.. .++++.| ..-++|.
T Consensus 146 ~i~~l~l~gissilg~iNfi~Ti~~~r~~gm~~~r~Plf~Ws~~vtsil--~l~a~PvLa~a~~~ll~dr~~gt~ff~~~ 223 (514)
T d1v54a_ 146 TIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVL--LLLSLPVLAAGITMLLTDRNLNTTFFDPA 223 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCCGGGSCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHSCCCSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 9999999999999988999999987616887414660689999999999--99998999999999999985798304777
Q ss_pred CCCCH-HHHHHH---H-HHHHHHHHHHHHHHHHHHHHHCCCCCEEC-HHHHHHHHHHH
Q ss_conf 78758-899876---5-33467889877999987874258730224-37999999999
Q gi|254780473|r 348 MGSGA-NVNAFF---G-IMTMVIAVPTGAKIFNWLFTMRLGKVRFE-VPMMWTLGFMI 399 (671)
Q Consensus 348 ~G~~~-~~~~~F---~-i~Tm~IaIPTgvkiFnwl~Tl~~G~ir~~-~pml~~lgfi~ 399 (671)
.|-++ ..|..| + -.-.+..+|.-.-+..-+.+.-+.|.-+. ..|.+++..+.
T Consensus 224 ~Ggdp~L~qhLFWffgHPeVYi~iLPa~g~~s~ii~~~s~rk~~fg~~~~v~a~~~i~ 281 (514)
T d1v54a_ 224 GGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIG 281 (514)
T ss_dssp GTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 7867999999998548860221299889999999998738874557199999999999
No 9
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]}
Probab=13.42 E-value=21 Score=10.52 Aligned_cols=39 Identities=10% Similarity=0.280 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCCCCCEECCCCCHHHHHHC
Q ss_conf 9989999710126--9981199894759607845504775553
Q gi|254780473|r 540 IGDPWDGRTLEWS--ISSPSPQYNFAFTPIVSTIDAWEHMKNR 580 (671)
Q Consensus 540 ~~dPW~~~tLEW~--~~sPpp~~nF~~~P~v~~~d~~~~~k~~ 580 (671)
+||| ++.+.||- +++.+..-+++..+.+.+ |+..+++++
T Consensus 441 tG~P-n~~~~~Wp~y~~~~~~~l~i~~~~~~~~-~p~~er~~~ 481 (483)
T d1qe3a_ 441 TGNP-STEAVNWPAYHEETRETVILDSEITIEN-DPESEKRQK 481 (483)
T ss_dssp HSCC-CCSSCCCCCCCTTTCEEEEESSSCEEEE-STTHHHHHH
T ss_pred CCCC-CCCCCCCCCCCCCCCCEEEECCCCEEEE-CCCHHHHHH
T ss_conf 2889-9998999997799879799799995787-956899996
No 10
>d1kaca_ b.21.1.1 (A:) Adenovirus fiber protein "knob" domain {Human adenovirus type 12 [TaxId: 28282]}
Probab=13.34 E-value=21 Score=10.50 Aligned_cols=26 Identities=27% Similarity=0.570 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 999971012699811998947596078
Q gi|254780473|r 543 PWDGRTLEWSISSPSPQYNFAFTPIVS 569 (671)
Q Consensus 543 PW~~~tLEW~~~sPpp~~nF~~~P~v~ 569 (671)
|.|-+|| |++|.|.|--.+.+.+.-+
T Consensus 2 ~~d~~TL-WTtpdPspNc~i~~~~D~K 27 (185)
T d1kaca_ 2 PYDPLTL-WTTPDPPPNCSLIQELDAK 27 (185)
T ss_dssp CSEEEEE-ESCSSCCSCBCSSSTTCEE
T ss_pred CCCCCEE-CCCCCCCCCEEEECCCCCE
T ss_conf 9776206-3799869987886289836
Done!