HHsearch alignment of GI: 254780474 and MMDB domain: 1byp_A_
>1byp_A (A:) Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant; 1.75A {Silene pratensis}
Probab=94.67 E-value=0.18 Score=29.86 Aligned_cols=73 Identities=18% Similarity=0.232 Sum_probs=52.7
Q ss_pred CCEEEEEECCCEEEEEEEECC----CCHHCCCHHHCCEECCCCCCCE-------EEEEEECCCEEEEEECCCCCCCCCCC
Q ss_conf 430689636982899998358----1011022010740311698514-------89999427748966613326576113
Q gi|254780474|r 164 IINELVVPIDRPLEFRITASS----VMNSFYIPGLAGQIYAMAGMET-------KLHAVMNKKGAYSGFSANYSGRGFSH 232 (332)
Q Consensus 164 tvneL~lPv~~pV~f~ltS~D----ViHSF~IP~l~~k~daiPG~~t-------~l~~~a~~~G~y~G~cae~cG~ghs~ 232 (332)
..+.|.+.+|..|+|.+++.. .+|...++......+.-+...+ ...+++++||+|.-.|.--|..|
T Consensus 15 ~~~~i~v~~Gd~V~~~~~n~~~H~~~~h~~~~~~~~~~~~~~~~~~~~~i~pg~t~~~~f~~pG~~~yhC~~H~~~G--- 91 (99)
T 1byp_A 15 VPSDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAG--- 91 (99)
T ss_dssp ESSEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECGGGTTTT---
T ss_pred CCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC---
T ss_conf 39999989999999999998842268734777876531467665456555898569999668954999977787789---
Q ss_pred CEEEEEE
Q ss_conf 6589997
Q gi|254780474|r 233 MRFKFYG 239 (332)
Q Consensus 233 M~f~v~v 239 (332)
|...++|
T Consensus 92 M~G~i~V 98 (99)
T 1byp_A 92 MVGKVTV 98 (99)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
T ss_conf 8899998