HHsearch alignment of GI: 254780474 and MMDB domain: 1byp_A_

>1byp_A (A:) Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant; 1.75A {Silene pratensis}
Probab=94.67  E-value=0.18  Score=29.86  Aligned_cols=73  Identities=18%  Similarity=0.232  Sum_probs=52.7

Q ss_pred             CCEEEEEECCCEEEEEEEECC----CCHHCCCHHHCCEECCCCCCCE-------EEEEEECCCEEEEEECCCCCCCCCCC
Q ss_conf             430689636982899998358----1011022010740311698514-------89999427748966613326576113
Q gi|254780474|r  164 IINELVVPIDRPLEFRITASS----VMNSFYIPGLAGQIYAMAGMET-------KLHAVMNKKGAYSGFSANYSGRGFSH  232 (332)
Q Consensus       164 tvneL~lPv~~pV~f~ltS~D----ViHSF~IP~l~~k~daiPG~~t-------~l~~~a~~~G~y~G~cae~cG~ghs~  232 (332)
                      ..+.|.+.+|..|+|.+++..    .+|...++......+.-+...+       ...+++++||+|.-.|.--|..|   
T Consensus        15 ~~~~i~v~~Gd~V~~~~~n~~~H~~~~h~~~~~~~~~~~~~~~~~~~~~i~pg~t~~~~f~~pG~~~yhC~~H~~~G---   91 (99)
T 1byp_A           15 VPSDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAG---   91 (99)
T ss_dssp             ESSEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECGGGTTTT---
T ss_pred             CCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC---
T ss_conf             39999989999999999998842268734777876531467665456555898569999668954999977787789---


Q ss_pred             CEEEEEE
Q ss_conf             6589997
Q gi|254780474|r  233 MRFKFYG  239 (332)
Q Consensus       233 M~f~v~v  239 (332)
                      |...++|
T Consensus        92 M~G~i~V   98 (99)
T 1byp_A           92 MVGKVTV   98 (99)
T ss_dssp             CEEEEEE
T ss_pred             CEEEEEE
T ss_conf             8899998