HHsearch alignment of GI: 254780474 and MMDB domain: 1iby_A_
>1iby_A (A:) Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea}
Probab=99.94 E-value=1.6e-26 Score=207.89 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=82.1
Q ss_pred CCEEEEEEEEEEEEE-EEECCCCCCCCEEEEEECCCEEEEEEEEC-CCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEE
Q ss_conf 866899999843699-99626787743068963698289999835-8101102201074031169851489999427748
Q gi|254780474|r 140 KPLVVEVVALDWKWL-FLLPEQQVAIINELVVPIDRPLEFRITAS-SVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGA 217 (332)
Q Consensus 140 ~~l~I~V~a~qW~W~-F~YP~~giatvneL~lPv~~pV~f~ltS~-DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~ 217 (332)
+...++..+.++.+. ..+ +....+.|+|++|+|+||+|.|||. |||||||||+|++|+||+||+.|+++++++++|+
T Consensus 12 ~~~~v~~~~~~~~~~~~~~-~~~~~~~~~l~vp~g~~V~~~lTs~~DViHsF~vp~~~ik~daiPG~~~~~~~~~~~~G~ 90 (112)
T 1iby_A 12 DTTIPELNVEGVTVKNIRA-FNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAFGVQEVIKAGETKTISFTADKAGA 90 (112)
T ss_dssp EEEEEEEEETTEEEEEEEE-EEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTEEEEECTTCEEEEEEECCSCEE
T ss_pred CCCCCCCCCCCCEEEEEEE-EEEEECCCEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCE
T ss_conf 5646532657705663797-663418998998799999999996998717789727565333369953268998145736
Q ss_pred EEEECCCCCCCCCCCCEEEEE
Q ss_conf 966613326576113658999
Q gi|254780474|r 218 YSGFSANYSGRGFSHMRFKFY 238 (332)
Q Consensus 218 y~G~cae~cG~ghs~M~f~v~ 238 (332)
|+|+|+||||.||..|.++|+
T Consensus 91 y~g~C~E~CG~~Hm~m~i~VV 111 (112)
T 1iby_A 91 FTIWCQLHPKNIHLPGTLNVV 111 (112)
T ss_dssp EEEBCSSSCTTTBCCEEEEEE
T ss_pred EEEECCCCCHHHCCEEEEEEE
T ss_conf 999885167441685899996