HHsearch alignment of GI: 254780474 and MMDB domain: 1sdd_B_188-336
>1sdd_B (B:188-336) Coagulation factor V; copper-binding protein, cofactor, blood clotting; HET: NAG NDG; 2.80A {Bos taurus}
Probab=93.39 E-value=0.38 Score=27.55 Aligned_cols=81 Identities=10% Similarity=-0.039 Sum_probs=60.2
Q ss_pred CCCCEEEEEECCCEEEEEEEEC---CCCH-----HCCCHHHC------CEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 7743068963698289999835---8101-----10220107------40311698514899994277489666133265
Q gi|254780474|r 162 VAIINELVVPIDRPLEFRITAS---SVMN-----SFYIPGLA------GQIYAMAGMETKLHAVMNKKGAYSGFSANYSG 227 (332)
Q Consensus 162 iatvneL~lPv~~pV~f~ltS~---DViH-----SF~IP~l~------~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG 227 (332)
....+.|.++.|..|+++++.. +-.| ....+..+ ......||-...+.++++++|+|.-.|....
T Consensus 48 ~~~~~~i~~~~G~~v~~~v~N~~~~~~~h~iH~HG~~~~~~~~~~~~~~~~~i~pg~~~~~~f~a~~~G~~~~HcHi~~- 126 (149)
T 1sdd_B 48 IYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE- 126 (149)
T ss_dssp SSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH-
T ss_pred ECCCCCEEEECCCEEEEEEEECCCCCCCEEEEEECCEEEECCCCCCEECEEEECCCEEEEEEEECCCCEEEEEEECCHH-
T ss_conf 0677875983699899999957899874238991859998267882513499699508999999689878999926625-
Q ss_pred CCCCCCEEEEEECCHH
Q ss_conf 7611365899970889
Q gi|254780474|r 228 RGFSHMRFKFYGKSEK 243 (332)
Q Consensus 228 ~ghs~M~f~v~v~s~~ 243 (332)
.-.+.|...+++.+++
T Consensus 127 h~~~GM~g~~iV~~~~ 142 (149)
T 1sdd_B 127 IQRAGMQTPFLIVDRE 142 (149)
T ss_dssp HHTTTCEEEEEEECTT
T ss_pred HHHCCCCCCEEECCCC
T ss_conf 7637133421231333