HHsearch alignment of GI: 254780474 and MMDB domain: 1sdd_B_188-336

>1sdd_B (B:188-336) Coagulation factor V; copper-binding protein, cofactor, blood clotting; HET: NAG NDG; 2.80A {Bos taurus}
Probab=93.39  E-value=0.38  Score=27.55  Aligned_cols=81  Identities=10%  Similarity=-0.039  Sum_probs=60.2

Q ss_pred             CCCCEEEEEECCCEEEEEEEEC---CCCH-----HCCCHHHC------CEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf             7743068963698289999835---8101-----10220107------40311698514899994277489666133265
Q gi|254780474|r  162 VAIINELVVPIDRPLEFRITAS---SVMN-----SFYIPGLA------GQIYAMAGMETKLHAVMNKKGAYSGFSANYSG  227 (332)
Q Consensus       162 iatvneL~lPv~~pV~f~ltS~---DViH-----SF~IP~l~------~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG  227 (332)
                      ....+.|.++.|..|+++++..   +-.|     ....+..+      ......||-...+.++++++|+|.-.|.... 
T Consensus        48 ~~~~~~i~~~~G~~v~~~v~N~~~~~~~h~iH~HG~~~~~~~~~~~~~~~~~i~pg~~~~~~f~a~~~G~~~~HcHi~~-  126 (149)
T 1sdd_B           48 IYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE-  126 (149)
T ss_dssp             SSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH-
T ss_pred             ECCCCCEEEECCCEEEEEEEECCCCCCCEEEEEECCEEEECCCCCCEECEEEECCCEEEEEEEECCCCEEEEEEECCHH-
T ss_conf             0677875983699899999957899874238991859998267882513499699508999999689878999926625-


Q ss_pred             CCCCCCEEEEEECCHH
Q ss_conf             7611365899970889
Q gi|254780474|r  228 RGFSHMRFKFYGKSEK  243 (332)
Q Consensus       228 ~ghs~M~f~v~v~s~~  243 (332)
                      .-.+.|...+++.+++
T Consensus       127 h~~~GM~g~~iV~~~~  142 (149)
T 1sdd_B          127 IQRAGMQTPFLIVDRE  142 (149)
T ss_dssp             HHTTTCEEEEEEECTT
T ss_pred             HHHCCCCCCEEECCCC
T ss_conf             7637133421231333