HHsearch alignment of GI: 254780474 and MMDB domain: 2gsm_B_103-262
>2gsm_B (B:103-262) Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.9e-42 Score=319.80 Aligned_cols=120 Identities=19% Similarity=0.427 Sum_probs=113.0
Q ss_pred CCCCEEEEEEEEEEEEEEEECCC--------------------------------------CCCCCEEEEEECCCEEEEE
Q ss_conf 88866899999843699996267--------------------------------------8774306896369828999
Q gi|254780474|r 138 NSKPLVVEVVALDWKWLFLLPEQ--------------------------------------QVAIINELVVPIDRPLEFR 179 (332)
Q Consensus 138 ~~~~l~I~V~a~qW~W~F~YP~~--------------------------------------giatvneL~lPv~~pV~f~ 179 (332)
.+++++|+|+|+||+|.|+||+. .+.+.|+|+||+|+||+|+
T Consensus 3 ~~p~~tV~v~G~QW~W~f~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lP~~~~v~~~ 82 (160)
T 2gsm_B 3 PEADVTVKVTGYQWYWGYEYPDEEISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQ 82 (160)
T ss_dssp CCCSEEEEEEEETTEEEEEETTTTEEEEECBTTSGGGTCCSSCCHHHHHHHHHTTCCGGGTTTCBSSCEEEETTSEEEEE
T ss_pred CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEE
T ss_conf 99976899888761342136644454333024775546543358402544300245565434155771898169878688
Q ss_pred EEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCC
Q ss_conf 983581011022010740311698514899994277489666133265761136589997088999999999860724
Q gi|254780474|r 180 ITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWISKVKRQGT 257 (332)
Q Consensus 180 ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s~~~f~~Wv~~~ka~~~ 257 (332)
+||.|||||||||+||+|+||||||.|+++++++++|+|+|+|+||||.|||.|+|+|+|+++++|++|++++|+.++
T Consensus 83 itS~DViHsF~vP~l~~K~DaiPG~~~~~~~~~~~~G~y~g~C~E~CG~~Hs~M~~~V~vv~~~~f~~W~~~~~~~~~ 160 (160)
T 2gsm_B 83 VTGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVSEEAYAAWLEQHHHHHH 160 (160)
T ss_dssp EEESSSCEEEEEGGGTEEEEECBTCCEEEEEECCSCEEEEECCCSCCSTTGGGCCEEEEEECHHHHHHHHHHHCCC--
T ss_pred EECCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCCEEEEEECHHHCCHHHCCCCEEEEEECHHHHHHHHHHHCCCCC
T ss_conf 861741343134535726762088069999994897679998667508636799169999889999999964543479