HHsearch results for GI: 254780474 and protein with PDBid: 1cyx_A
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=100.00 E-value=0 Score=464.33 Aligned_cols=200 Identities=38% Similarity=0.724 Sum_probs=190.3
Q ss_pred HHHHCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCC
Q ss_conf 77513444200001244678888866899999843699996267877430689636982899998358101102201074
Q gi|254780474|r 117 THRMDPYAPLERISESKSIAKNSKPLVVEVVALDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAG 196 (332)
Q Consensus 117 ~~~ldp~~p~~~~~~~~~~~~~~~~l~I~V~a~qW~W~F~YP~~giatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~ 196 (332)
||+||||+|+ +++++|++|+|+|+||+|+|+||++|++|+|||+||+|+||+|+|||+|||||||||+|++
T Consensus 1 th~ldp~~p~---------~~~~~~~~I~V~a~qW~W~f~Yp~~~i~t~n~l~lP~~~pV~f~ltS~DViHsf~IP~l~~ 71 (205)
T 1cyx_A 1 THALEPSKPL---------AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIPRLGS 71 (205)
T ss_dssp -----------------------CCEEEEEEEETTEEEEEETTTTEEEESEEEEETTSCEEEEEEESSSCEEEEEGGGTE
T ss_pred CCCCCCCCCC---------CCCCCCEEEEEEEEECEEEEEECCCCCCEEEEEEEECCCEEEEEEEECCCCEEEEECCCCC
T ss_conf 9767888998---------8899988999999922089896899961341699838998999998187412578525243
Q ss_pred EECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEC-CHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHCC
Q ss_conf 03116985148999942774896661332657611365899970-8899999999986072456-989999976102126
Q gi|254780474|r 197 QIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGK-SEKGFEDWISKVKRQGTFL-NRQEYLLLKKPSERD 274 (332)
Q Consensus 197 k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~-s~~~f~~Wv~~~ka~~~~l-~~~~y~~l~~ps~~~ 274 (332)
|+|+||||+|++||+|+++|+|+|+|+||||.|||.|+|+++|+ ++++|++|++++|+++.++ +.++|++|++|++.+
T Consensus 72 k~da~PG~~~~~~~~a~~~G~y~g~Cae~CG~gHs~M~~~v~vv~~~~~f~~W~~~~~~~~~~~~~~~~~~~l~~~~~~~ 151 (205)
T 1cyx_A 72 QIYAMAGMQTRLHLIANEPGTYDGICAEICGPGHSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYN 151 (205)
T ss_dssp EEEECTTCCEEEEECCSSSEEEEEEECSCCSTTSTTCCEEEEEESSHHHHHHHHHHHHTCSCCBCSHHHHHHHHSCCSSC
T ss_pred CCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
T ss_conf 11248995799999726860189984442470125784699998999999999999764855456388999987564668
Q ss_pred CCEEECCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCHHH
Q ss_conf 321720478354268731524448856602102466688523440110011
Q gi|254780474|r 275 SVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGIDRHSLI 325 (332)
Q Consensus 275 ~~~~f~~~~~~lf~~i~~~~~~~~~~~~~~~m~~~~~~g~~~~~~~~~~~~ 325 (332)
+++|||+++|+||+.|+++|++.|+.+....+..++.++.||+++|+....
T Consensus 152 ~~~~~s~~~~~lf~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~g~d~~~~~ 202 (205)
T 1cyx_A 152 QVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAE 202 (205)
T ss_dssp CCEEESCBCTTHHHHHHTTTC------------------------------
T ss_pred CCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 825874248412778999864327665676644453300388786755444