HHsearch results for GI: 254780474 and protein with PDBid: 1xme_B
>1xme_B Cytochrome C oxidase polypeptide II; cytochrome oxidase, heme, heme-AS, integral membrane protein, oxidoreductase; HET: BNG HEM HAS; 2.30A {Thermus thermophilus} SCOP: b.6.1.2 f.17.2.1 PDB: 1ehk_B* 2qpd_B* 2qpe_B* 3bvd_B* 3eh5_B* 3eh3_B* 3eh4_B*
Probab=100.00 E-value=2.8e-34 Score=261.97 Aligned_cols=141 Identities=18% Similarity=0.298 Sum_probs=106.1
Q ss_pred CCEEEEEEEHHHHHHH-HHHHHHHHHHHHHHCCCCCCHHCCC----------------CCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 6612553022789999-9999999988775134442000012----------------4467888886689999984369
Q gi|254780474|r 91 STLLELFVWLVPLVIV-GFLAVITWDATHRMDPYAPLERISE----------------SKSIAKNSKPLVVEVVALDWKW 153 (332)
Q Consensus 91 s~~lEi~wt~iP~iIi-~~L~~~t~~~~~~ldp~~p~~~~~~----------------~~~~~~~~~~l~I~V~a~qW~W 153 (332)
+.++|++|+++|++++ +++++++|......+...|...... ...........+|.++++||.|
T Consensus 11 ~~~~E~~W~~vp~~ilvvfl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 90 (168)
T 1xme_B 11 ILAYEKGWLAFSLAMLFVFIALIAYTLATHTAGVIPAGKLERVDPTTVRQEGPWADPAQAVVQTGPNQYTVYVLAFAFGY 90 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGGSCCCSCCBCCTTSTTTSSTTTCGGGSEEECSSSEEEEEEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCC
T ss_conf 30456889999999998999999999999713568943256012689863450135577743568985999999850456
Q ss_pred EEEECCCCCCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC
Q ss_conf 99962678774306896369828999983581011022010740311698514899994277489666133265761136
Q gi|254780474|r 154 LFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHM 233 (332)
Q Consensus 154 ~F~YP~~giatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M 233 (332)
+.|+|++|+|+||+|.+||+|||||||||+|++|+|++||+.|++||+|+++|+|+|+|+||||.||+.|
T Consensus 91 ----------~~~~l~vp~g~~V~~~lts~DViHsf~ip~~~~k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H~~M 160 (168)
T 1xme_B 91 ----------QPNPIEVPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNM 160 (168)
T ss_dssp ----------ESSSEEEETTSEEEEEEEBSSSCEEEEETTSSCEEEECBTBCEEEEEECCSCEEEEEECCSCCSTTGGGC
T ss_pred ----------CCCEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEECHHHCCCCCCCC
T ss_conf ----------7888999599999999992885420676586851135899679999993898899999713148480578
Q ss_pred EEEEEECC
Q ss_conf 58999708
Q gi|254780474|r 234 RFKFYGKS 241 (332)
Q Consensus 234 ~f~v~v~s 241 (332)
+++++|++
T Consensus 161 ~~~v~V~e 168 (168)
T 1xme_B 161 FGTIVVKE 168 (168)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
T ss_conf 07999979