HHsearch results for GI: 254780474 and protein with PDBid: 1xme_B

>1xme_B Cytochrome C oxidase polypeptide II; cytochrome oxidase, heme, heme-AS, integral membrane protein, oxidoreductase; HET: BNG HEM HAS; 2.30A {Thermus thermophilus} SCOP: b.6.1.2 f.17.2.1 PDB: 1ehk_B* 2qpd_B* 2qpe_B* 3bvd_B* 3eh5_B* 3eh3_B* 3eh4_B*
Probab=100.00  E-value=2.8e-34  Score=261.97  Aligned_cols=141  Identities=18%  Similarity=0.298  Sum_probs=106.1

Q ss_pred             CCEEEEEEEHHHHHHH-HHHHHHHHHHHHHHCCCCCCHHCCC----------------CCCCCCCCCCEEEEEEEEEEEE
Q ss_conf             6612553022789999-9999999988775134442000012----------------4467888886689999984369
Q gi|254780474|r   91 STLLELFVWLVPLVIV-GFLAVITWDATHRMDPYAPLERISE----------------SKSIAKNSKPLVVEVVALDWKW  153 (332)
Q Consensus        91 s~~lEi~wt~iP~iIi-~~L~~~t~~~~~~ldp~~p~~~~~~----------------~~~~~~~~~~l~I~V~a~qW~W  153 (332)
                      +.++|++|+++|++++ +++++++|......+...|......                ...........+|.++++||.|
T Consensus        11 ~~~~E~~W~~vp~~ilvvfl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~   90 (168)
T 1xme_B           11 ILAYEKGWLAFSLAMLFVFIALIAYTLATHTAGVIPAGKLERVDPTTVRQEGPWADPAQAVVQTGPNQYTVYVLAFAFGY   90 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGGSCCCSCCBCCTTSTTTSSTTTCGGGSEEECSSSEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCC
T ss_conf             30456889999999998999999999999713568943256012689863450135577743568985999999850456


Q ss_pred             EEEECCCCCCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC
Q ss_conf             99962678774306896369828999983581011022010740311698514899994277489666133265761136
Q gi|254780474|r  154 LFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHM  233 (332)
Q Consensus       154 ~F~YP~~giatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M  233 (332)
                                +.|+|++|+|+||+|.+||+|||||||||+|++|+|++||+.|++||+|+++|+|+|+|+||||.||+.|
T Consensus        91 ----------~~~~l~vp~g~~V~~~lts~DViHsf~ip~~~~k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H~~M  160 (168)
T 1xme_B           91 ----------QPNPIEVPQGAEIVFKITSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNM  160 (168)
T ss_dssp             ----------ESSSEEEETTSEEEEEEEBSSSCEEEEETTSSCEEEECBTBCEEEEEECCSCEEEEEECCSCCSTTGGGC
T ss_pred             ----------CCCEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEECHHHCCCCCCCC
T ss_conf             ----------7888999599999999992885420676586851135899679999993898899999713148480578


Q ss_pred             EEEEEECC
Q ss_conf             58999708
Q gi|254780474|r  234 RFKFYGKS  241 (332)
Q Consensus       234 ~f~v~v~s  241 (332)
                      +++++|++
T Consensus       161 ~~~v~V~e  168 (168)
T 1xme_B          161 FGTIVVKE  168 (168)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEEC
T ss_conf             07999979