HHsearch results for GI: 254780474 and protein with PDBid: 2zoo_A
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, metal-binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis TAC125}
Probab=96.12 E-value=0.0001 Score=51.85 Aligned_cols=145 Identities=9% Similarity=0.006 Sum_probs=90.3
Q ss_pred EEEEEECCCEEEEEEEE--CCCCHHCCCHH---------------HCC-EECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 06896369828999983--58101102201---------------074-0311698514899994277489666133265
Q gi|254780474|r 166 NELVVPIDRPLEFRITA--SSVMNSFYIPG---------------LAG-QIYAMAGMETKLHAVMNKKGAYSGFSANYSG 227 (332)
Q Consensus 166 neL~lPv~~pV~f~ltS--~DViHSF~IP~---------------l~~-k~daiPG~~t~l~~~a~~~G~y~G~cae~cG 227 (332)
+.|.+..|+.|+|++-. .+..|+|.+.. ... ....-||-...+.|++++||.|...|-.++.
T Consensus 204 ~~l~v~~Ge~vRlRliNag~~~~~~~hl~Gh~f~vV~~DG~~~~~~~~dt~~i~pG~r~~v~~~a~~PG~y~~h~H~~~~ 283 (442)
T 2zoo_A 204 NSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFR 283 (442)
T ss_dssp GCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHH
T ss_pred CCEEECCCCEEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCHHH
T ss_conf 43697889899999981678875115867951899974890578887269999987569999996998578997781688
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHCC------------CCCCCH---HHHHHHHHHHHCCCCEEECCCC-------CC
Q ss_conf 7611365899970889999999998607------------245698---9999976102126321720478-------35
Q gi|254780474|r 228 RGFSHMRFKFYGKSEKGFEDWISKVKRQ------------GTFLNR---QEYLLLKKPSERDSVRYFSPIE-------KG 285 (332)
Q Consensus 228 ~ghs~M~f~v~v~s~~~f~~Wv~~~ka~------------~~~l~~---~~y~~l~~ps~~~~~~~f~~~~-------~~ 285 (332)
.-...|...+.|..+++++-|..++... ++++++ ..-.+..+.++....++|++|+ |+
T Consensus 284 ~~~~G~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~y~~~Ca~CH~~~G~G~~~ 363 (442)
T 2zoo_A 284 AFNKGALAMLKVEGPDDHSIFTGKTAENVYLPEGSAIQSLDNTFTKITANNKDEQIRFGQRVYEANCMACHQANGEGIPG 363 (442)
T ss_dssp HHTTSCEEEEEEESCCCTTTCCCCCCSCSSCCCCSCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHTHHHHCTTSCCBTT
T ss_pred HHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 98578758999617878034425503444300000234667654534569867876543455533246525889830888
Q ss_pred HHHHHHCCCCCCCCCCCCHHHCCCC
Q ss_conf 4268731524448856602102466
Q gi|254780474|r 286 LYYSILNLCVHPGKICMDEMMRIDA 310 (332)
Q Consensus 286 lf~~i~~~~~~~~~~~~~~~m~~~~ 310 (332)
.|+.+.+.-.-.+.........+++
T Consensus 364 ~~P~L~~~~~~~~~~~~~i~~~l~G 388 (442)
T 2zoo_A 364 AFPPLAKSDYLNNNPLLGVNAIIKG 388 (442)
T ss_dssp TBCCCTTCHHHHHCHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCHHHHHHEECCC
T ss_conf 7888899953048876654501026