HHsearch results for GI: 254780474 and protein with PDBid: 2zoo_A

>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, metal-binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis TAC125}
Probab=96.12  E-value=0.0001  Score=51.85  Aligned_cols=145  Identities=9%  Similarity=0.006  Sum_probs=90.3

Q ss_pred             EEEEEECCCEEEEEEEE--CCCCHHCCCHH---------------HCC-EECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf             06896369828999983--58101102201---------------074-0311698514899994277489666133265
Q gi|254780474|r  166 NELVVPIDRPLEFRITA--SSVMNSFYIPG---------------LAG-QIYAMAGMETKLHAVMNKKGAYSGFSANYSG  227 (332)
Q Consensus       166 neL~lPv~~pV~f~ltS--~DViHSF~IP~---------------l~~-k~daiPG~~t~l~~~a~~~G~y~G~cae~cG  227 (332)
                      +.|.+..|+.|+|++-.  .+..|+|.+..               ... ....-||-...+.|++++||.|...|-.++.
T Consensus       204 ~~l~v~~Ge~vRlRliNag~~~~~~~hl~Gh~f~vV~~DG~~~~~~~~dt~~i~pG~r~~v~~~a~~PG~y~~h~H~~~~  283 (442)
T 2zoo_A          204 NSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFR  283 (442)
T ss_dssp             GCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHH
T ss_pred             CCEEECCCCEEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCHHH
T ss_conf             43697889899999981678875115867951899974890578887269999987569999996998578997781688


Q ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHHCC------------CCCCCH---HHHHHHHHHHHCCCCEEECCCC-------CC
Q ss_conf             7611365899970889999999998607------------245698---9999976102126321720478-------35
Q gi|254780474|r  228 RGFSHMRFKFYGKSEKGFEDWISKVKRQ------------GTFLNR---QEYLLLKKPSERDSVRYFSPIE-------KG  285 (332)
Q Consensus       228 ~ghs~M~f~v~v~s~~~f~~Wv~~~ka~------------~~~l~~---~~y~~l~~ps~~~~~~~f~~~~-------~~  285 (332)
                      .-...|...+.|..+++++-|..++...            ++++++   ..-.+..+.++....++|++|+       |+
T Consensus       284 ~~~~G~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~y~~~Ca~CH~~~G~G~~~  363 (442)
T 2zoo_A          284 AFNKGALAMLKVEGPDDHSIFTGKTAENVYLPEGSAIQSLDNTFTKITANNKDEQIRFGQRVYEANCMACHQANGEGIPG  363 (442)
T ss_dssp             HHTTSCEEEEEEESCCCTTTCCCCCCSCSSCCCCSCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHTHHHHCTTSCCBTT
T ss_pred             HHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             98578758999617878034425503444300000234667654534569867876543455533246525889830888


Q ss_pred             HHHHHHCCCCCCCCCCCCHHHCCCC
Q ss_conf             4268731524448856602102466
Q gi|254780474|r  286 LYYSILNLCVHPGKICMDEMMRIDA  310 (332)
Q Consensus       286 lf~~i~~~~~~~~~~~~~~~m~~~~  310 (332)
                      .|+.+.+.-.-.+.........+++
T Consensus       364 ~~P~L~~~~~~~~~~~~~i~~~l~G  388 (442)
T 2zoo_A          364 AFPPLAKSDYLNNNPLLGVNAIIKG  388 (442)
T ss_dssp             TBCCCTTCHHHHHCHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCCCHHHHHHEECCC
T ss_conf             7888899953048876654501026