HHsearch results for GI: 254780474 and protein with PDBid: 3hb3_B

>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=100.00  E-value=0  Score=469.96  Aligned_cols=208  Identities=20%  Similarity=0.371  Sum_probs=190.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHH
Q ss_conf             26898989999999999999999999999999999998853046777777875345661255302278999999999999
Q gi|254780474|r   35 VMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHSTLLELFVWLVPLVIVGFLAVITW  114 (332)
Q Consensus        35 ~l~P~G~ia~~~~~L~~~~~~l~liV~v~V~~l~~~~~~kyR~~~~~a~~~p~~~hs~~lEi~wt~iP~iIi~~L~~~t~  114 (332)
                      ..+|++++|+++..|+.+.++++++|+++|.++++|+++|||++++  ..+++++||+++|++||++|++|+++++++++
T Consensus        49 f~~~asp~a~~i~~L~~~~l~i~~~I~v~V~~~l~~~~~rfr~~~~--~~~~~~~~~~~lE~~wtiip~iil~~l~~~~~  126 (298)
T 3hb3_B           49 FQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRAN--PVPARFTHNTPIEVIWTLVPVLILVAIGAFSL  126 (298)
T ss_dssp             CSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBTTTS--SSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9898998999999999999999999999999999999999836588--87532367751015788999999999999987


Q ss_pred             HHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCC------------------------CCCCCEEEEE
Q ss_conf             8877513444200001244678888866899999843699996267------------------------8774306896
Q gi|254780474|r  115 DATHRMDPYAPLERISESKSIAKNSKPLVVEVVALDWKWLFLLPEQ------------------------QVAIINELVV  170 (332)
Q Consensus       115 ~~~~~ldp~~p~~~~~~~~~~~~~~~~l~I~V~a~qW~W~F~YP~~------------------------giatvneL~l  170 (332)
                      ...+.++.             .+++++++|+|+|+||+|.|+||++                        ++.++||||+
T Consensus       127 ~~~~~~~~-------------~~~~~~l~V~V~g~QW~W~f~Yp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~L~l  193 (298)
T 3hb3_B          127 PILFRSQE-------------MPNDPDLVIKAIGHQWYWSYEYPNDGVAFDALMLEKEALADAGYSEDEYLLATDNPVVV  193 (298)
T ss_dssp             HHHHHHHS-------------CCSSCSEEEEEEEETTEEEEEETTTTEEEEECBCCGGGHHHHTCCGGGTTTCBSSCEEE
T ss_pred             HHHHHHCC-------------CCCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEE
T ss_conf             65543114-------------68898789998761322311011022445422354133023577776454455773998


Q ss_pred             ECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHH
Q ss_conf             36982899998358101102201074031169851489999427748966613326576113658999708899999999
Q gi|254780474|r  171 PIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWIS  250 (332)
Q Consensus       171 Pv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~G~cae~cG~ghs~M~f~v~v~s~~~f~~Wv~  250 (332)
                      |+|+||+|++||+|||||||||+||+|+||||||.|++||+++|+|+|+|+||||||.|||.|+|+|+|+|++||++|++
T Consensus       194 P~~~~V~~~ltS~DVIHSF~VP~~~~K~DaiPG~~~~~~f~~~~~G~y~g~CsElCG~~Hs~M~~~V~Vvs~~~f~~Wl~  273 (298)
T 3hb3_B          194 PVGKKVLVQVTATDVIHAWTIPAFAVKQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQEKYEAWLA  273 (298)
T ss_dssp             ESSSEEEEEEEESSSCEEEEEGGGTEEEEECTTCCEEEEEECSSSEEEEECCCSCCSTTTTSCCEEEEEECHHHHHHHHH
T ss_pred             ECCCEEEEEEEECCCHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECHHHHCHHHCCCCEEEEEECHHHHHHHHH
T ss_conf             42756899998675114431510010688538871799998089778999867652854659916999978999999999


Q ss_pred             HHHCCCC
Q ss_conf             9860724
Q gi|254780474|r  251 KVKRQGT  257 (332)
Q Consensus       251 ~~ka~~~  257 (332)
                      ++|+...
T Consensus       274 ~~~~~~~  280 (298)
T 3hb3_B          274 GAKEEFA  280 (298)
T ss_dssp             HHHHHTB
T ss_pred             HHHHHHC
T ss_conf             8666513