HHSEARCH alignment of GI: 254780474 and SCOP domain: d1cyxa_

Alignment
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=388.84  Aligned_cols=156  Identities=41%  Similarity=0.832  Sum_probs=151.6

Q ss_pred             CCEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCHHCCCHHHCCEECCCCCCCEEEEEEECCCEEEE
Q ss_conf             86689999984369999626787743068963698289999835810110220107403116985148999942774896
Q gi|254780474|r  140 KPLVVEVVALDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYS  219 (332)
Q Consensus       140 ~~l~I~V~a~qW~W~F~YP~~giatvneL~lPv~~pV~f~ltS~DViHSF~IP~l~~k~daiPG~~t~l~~~a~~~G~y~  219 (332)
                      ||++|+|+|+||+|+|+||++|+.|+|||++|+|+||+|.|||.|||||||||+|++|+|+||||.|++||+++++|+|+
T Consensus         1 KP~~I~V~g~QW~W~f~Yp~~~i~t~n~l~lP~g~pV~~~ltS~DViHsF~vP~l~~k~daiPG~~~~~~~~~~~~G~y~   80 (158)
T d1cyxa_           1 KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYD   80 (158)
T ss_dssp             CCEEEEEEEETTEEEEEETTTTEEEESEEEEETTSCEEEEEEESSSCEEEEEGGGTEEEEECTTCCEEEEECCSSSEEEE
T ss_pred             CCEEEEEEEEECEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHCCEEECCCCCCEEEEEEEECCCCCEE
T ss_conf             98899999995408988089996512128960797689999759841045664100012027986055665505887388


Q ss_pred             EECCCCCCCCCCCCEEEEEEC-CHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHCCCC
Q ss_conf             661332657611365899970-8899999999986072456-989999976102126321720478354268731524
Q gi|254780474|r  220 GFSANYSGRGFSHMRFKFYGK-SEKGFEDWISKVKRQGTFL-NRQEYLLLKKPSERDSVRYFSPIEKGLYYSILNLCV  295 (332)
Q Consensus       220 G~cae~cG~ghs~M~f~v~v~-s~~~f~~Wv~~~ka~~~~l-~~~~y~~l~~ps~~~~~~~f~~~~~~lf~~i~~~~~  295 (332)
                      |+|+||||.||+.|+|+++++ ++++|++|++++|+++.++ +.++|++|++|++.+++++|+++.|+||+.|+++||
T Consensus        81 g~Cae~CG~gH~~M~~~v~vv~~~~~f~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Lf~~vv~~~~  158 (158)
T d1cyxa_          81 GICAEICGPGHSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFM  158 (158)
T ss_dssp             EEECSCCSTTSTTCCEEEEEESSHHHHHHHHHHHHTCSCCBCSHHHHHHHHSCCSSCCCEEESCBCTTHHHHHHTTTC
T ss_pred             EECHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCC
T ss_conf             871432071224583699997999999999998673854454256799986786778815642689826999998519


SCOP domain information

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Periplasmic domain of cytochrome c oxidase subunit II
domain: Quinol oxidase (CyoA)
species: Escherichia coli [TaxId: 562]