BLAST/PSIBLAST alignment of GI: 254780474 and GI: 116255242 at iteration 1
>gi|116255242|ref|YP_771075.1| putative ubiquinol oxidase polypeptide II precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 394
>gi|115259890|emb|CAK02984.1| putative ubiquinol oxidase polypeptide II precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 394
 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/301 (58%), Positives = 225/301 (74%), Gaps = 1/301 (0%)

Query: 29  SGFEFIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKW 88
           +G   +VM P GDIA QQ  LI I+  LMLLI++PV F  LFFAW+YR +N  A Y P+W
Sbjct: 20  AGCNMVVMAPSGDIAAQQRDLIVISTVLMLLIIIPVIFLTLFFAWRYRRSNTAATYAPEW 79

Query: 89  CHSTLLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVA 148
            HST LE+ +W  PL I+  L  +TW +TH++DPY PL+R+   ++I  N+KPL+VEVVA
Sbjct: 80  HHSTRLEIVIWAAPLAIIIALGAVTWISTHKLDPYRPLDRLDAERAIPANTKPLIVEVVA 139

Query: 149 LDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKL 208
           LDWKWLF  PE  +A +NEL  P+D P+ F+ITASSVMNSFYIP LAGQIYAM GMETKL
Sbjct: 140 LDWKWLFFYPELGIATVNELAAPVDVPINFKITASSVMNSFYIPALAGQIYAMPGMETKL 199

Query: 209 HAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWISKVKRQGTFLNRQEYLLLK 268
           HAV+NK+G Y GFSANYSG GFSHMRFKF+G  + GF+ W+++VK+QGT LNR  YL L+
Sbjct: 200 HAVINKQGEYEGFSANYSGSGFSHMRFKFHGLDQAGFDAWVAQVKQQGTMLNRDAYLKLE 259

Query: 269 KPSERDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGI-DRHSLIYD 327
           KPSE++ VRY++  +  LY +ILN+C  PGK+CM+EMM ID +GGGG     +R  L YD
Sbjct: 260 KPSEKEPVRYYAGADADLYNAILNMCAAPGKMCMNEMMHIDMMGGGGKESAENREKLRYD 319

Query: 328 E 328
           +
Sbjct: 320 D 320