PSIBLAST alignment of GI: 254780474 and protein with PDB id: 1m56
>gi|23200455|pdb|1M56|B Chain B, Structure Of Cytochrome C Oxidase From Rhodobactor Sphaeroides (Wild Type) Length = 264
>gi|23200459|pdb|1M56|H Chain H, Structure Of Cytochrome C Oxidase From Rhodobactor Sphaeroides (Wild Type) Length = 264
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 87/259 (33%), Gaps = 54/259 (20%)
Query: 39 YGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHSTLLELFV 98
+A Q L + ++ I + V IL+ W++ K ++ H++ LE+
Sbjct: 22 ASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNK--VPARFTHNSPLEIAW 79
Query: 99 WLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVALDWKWLFLLP 158
+VP+VI+ + + + V+V W W + P
Sbjct: 80 TIVPIVILVAIGAFSLPVLFNQQEI--------------PEADVTVKVTGYQWYWGYEYP 125
Query: 159 EQQVAIINELV--------------------VPIDRPLEFRI------------------ 180
+++++ + ++ EF +
Sbjct: 126 DEEISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQV 185
Query: 181 TASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGK 240
T + V++S+ +P + A+ G +L ++G + G + G ++M
Sbjct: 186 TGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVV 245
Query: 241 SEKGFEDWISKVKRQGTFL 259
SE+ + W+ + + L
Sbjct: 246 SEEAYAAWLEQARGGTYEL 264