PSIBLAST alignment of GI: 254780474 and protein with PDB id: 1m56

>gi|23200455|pdb|1M56|B Chain B, Structure Of Cytochrome C Oxidase From Rhodobactor Sphaeroides (Wild Type) Length = 264
>gi|23200459|pdb|1M56|H Chain H, Structure Of Cytochrome C Oxidase From Rhodobactor Sphaeroides (Wild Type) Length = 264
 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 87/259 (33%), Gaps = 54/259 (20%)

Query: 39  YGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHSTLLELFV 98
              +A Q   L    + ++  I + V   IL+  W++     K     ++ H++ LE+  
Sbjct: 22  ASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNK--VPARFTHNSPLEIAW 79

Query: 99  WLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVALDWKWLFLLP 158
            +VP+VI+  +   +                            + V+V    W W +  P
Sbjct: 80  TIVPIVILVAIGAFSLPVLFNQQEI--------------PEADVTVKVTGYQWYWGYEYP 125

Query: 159 EQQVAIINELV--------------------VPIDRPLEFRI------------------ 180
           +++++  + ++                           EF +                  
Sbjct: 126 DEEISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQV 185

Query: 181 TASSVMNSFYIPGLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGK 240
           T + V++S+ +P    +  A+ G   +L     ++G + G  +   G   ++M       
Sbjct: 186 TGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVV 245

Query: 241 SEKGFEDWISKVKRQGTFL 259
           SE+ +  W+ + +     L
Sbjct: 246 SEEAYAAWLEQARGGTYEL 264