RPSBLAST alignment of GI: 254780474 and protein with PDBid: 2gsm

>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 1m56_B* 1m57_B* Length = 262

 Score =  104 bits (260), Expect = 3e-23
 Identities = 41/237 (17%), Positives = 85/237 (35%), Gaps = 22/237 (9%)

Query: 37  DPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYR-STNKKARYDPKWCHSTLLE 95
                +A Q   L    + ++  I + V   IL+  W++    NK            +  
Sbjct: 20  PSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNKVPARFTHNSPLEIAW 79

Query: 96  LFVWLVPLVIVGFLAVITWDATHRMDP-----------------YAPLERISESKSIAKN 138
             V +V LV +G  ++        +                   Y   E   ES  I   
Sbjct: 80  TIVPIVILVAIGAFSLPVLFNQQEIPEADVTVKVTGYQWYWGYEYPDEEISFESYMIGSP 139

Query: 139 S----KPLVVEVVALDWKWLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGL 194
           +      +  EV     +  +   E  +A    +VVP+++ +  ++T + V++S+ +P  
Sbjct: 140 ATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQVTGADVIHSWTVPAF 199

Query: 195 AGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWISK 251
             +  A+ G   +L     ++G + G  +   G   ++M       SE+ +  W+ +
Sbjct: 200 GVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVSEEAYAAWLEQ 256