HHsearch alignment of GI: 254780475 and MMDB domain: 3i1n_1_
>3i1n_1 (1:) 50S ribosomal protein L33; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_1 1vs6_1 3i1p_1 3i1r_1 3i1t_1 3i20_1 3i22_1 2qam_1* 1p85_1 1p86_1 2awb_1 2aw4_1 2i2v_1 2j28_1 2i2t_1* 2qao_1* 2qba_1* 2qbc_1* 2qbe_1 2qbg_1 ...
Probab=99.91 E-value=1.7e-25 Score=153.54 Aligned_cols=55 Identities=60% Similarity=0.860 Sum_probs=54.4
Q ss_pred CCCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEC
Q ss_conf 9877626999995177887598354889983336994131744634466886509
Q gi|254780475|r 1 MAKAATIKIKLISSAGTGSFYVTKKNSRTMSGKMVKNKYDPVIRKHVEFKEGKIK 55 (55)
Q Consensus 1 MaK~~r~~I~L~st~~tg~~Y~T~knk~~~~~klel~Ky~p~~~kHvl~~E~KiK 55 (55)
|||+.|++|+|+|++|+++||+|+||++++||||||+||||+|++||+|+|+|||
T Consensus 1 Mak~~r~~i~L~ct~c~~~nY~T~KN~~~~~~rLel~Kycp~~~khtlhkE~Kik 55 (55)
T 3i1n_1 1 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55 (55)
T ss_dssp ---CCCBCCCEEESSSSCCEECCCBCSSSCCSCCCEEEEETTTTEEEEEECCC--
T ss_pred CCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHEEEECCCCCCCCEEEEEEEECC
T ss_conf 9976551699998288881797647888994144897418787856608876529