HHsearch results for GI: 254780475 and protein with PDBid: 1nkw_1

>1nkw_1 50S ribosomal protein L33; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_1* 1yl3_6 2b66_6 2b9n_6 2b9p_6
Probab=99.91  E-value=5e-25  Score=150.28  Aligned_cols=54  Identities=52%  Similarity=0.782  Sum_probs=52.2

Q ss_pred             CCC-CCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEE
Q ss_conf             987-762699999517788759835488998333699413174463446688650
Q gi|254780475|r    1 MAK-AATIKIKLISSAGTGSFYVTKKNSRTMSGKMVKNKYDPVIRKHVEFKEGKI   54 (55)
Q Consensus         1 MaK-~~r~~I~L~st~~tg~~Y~T~knk~~~~~klel~Ky~p~~~kHvl~~E~Ki   54 (55)
                      ||| ++|++|+|+||||+||+|+|+||++|+||||||+||||+||+||+|+|+||
T Consensus        28 MAKk~~Ri~IkL~Sta~tg~~Y~T~KNkrn~~eKLelkKYcp~crKHtlhkEtKi   82 (82)
T 1nkw_1           28 MAKDGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKKV   82 (82)
T ss_pred             CCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHCEEECCCCCCCCEEEEEEEEC
T ss_conf             1367882799999847889889762788899301068624877763450775209