HHsearch results for GI: 254780475 and protein with PDBid: 3ofq_1
>3ofq_1 50S ribosomal protein L33; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_1 2wwq_4 3ofr_1* 3i1n_1 1vs8_1 1vs6_1 1vt2_1 3i1p_1 3i1r_1 3i1t_1 3i20_1 3i22_1 3kcr_1 3orb_1* 2gya_1 2gyc_1 2qam_1* 1p85_1 1p86_1 2awb_1 ...
Probab=99.84 E-value=9.3e-23 Score=138.40 Aligned_cols=50 Identities=56% Similarity=0.832 Sum_probs=48.6
Q ss_pred CCEEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEE
Q ss_conf 76269999951778875983548899833369941317446344668865
Q gi|254780475|r 4 AATIKIKLISSAGTGSFYVTKKNSRTMSGKMVKNKYDPVIRKHVEFKEGK 53 (55)
Q Consensus 4 ~~r~~I~L~st~~tg~~Y~T~knk~~~~~klel~Ky~p~~~kHvl~~E~K 53 (55)
|.|++|+|+|+||+|++|+|+||++|+||||||+||||+|++||+|+|+|
T Consensus 1 gmR~~I~L~st~~tg~~Y~t~Kn~~~~~~rLel~Kycp~~~kHtlhkE~K 50 (50)
T 3ofq_1 1 GIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK 50 (50)
T ss_dssp CCSEEECCBCSSSCCCBCCEEECTTTCCSCCCCCEECTTTSSEECCBCCC
T ss_pred CCCCEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECC
T ss_conf 98658999982788845976588899950247974388887157178439